Query 023227
Match_columns 285
No_of_seqs 177 out of 1191
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 03:15:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aec_A Cysteine synthase, mito 100.0 2E-64 7E-69 461.0 29.7 284 1-284 146-429 (430)
2 3vc3_A Beta-cyanoalnine syntha 100.0 5.8E-64 2E-68 449.7 30.4 281 1-281 58-338 (344)
3 3tbh_A O-acetyl serine sulfhyd 100.0 1.8E-63 6E-68 445.3 31.0 282 1-282 43-324 (334)
4 1z7w_A Cysteine synthase; tran 100.0 4.2E-62 1.4E-66 435.0 32.0 283 1-283 38-320 (322)
5 2q3b_A Cysteine synthase A; py 100.0 6.2E-61 2.1E-65 425.9 31.2 275 1-276 39-313 (313)
6 1y7l_A O-acetylserine sulfhydr 100.0 8.9E-61 3E-65 425.5 26.9 274 1-275 34-315 (316)
7 2v03_A Cysteine synthase B; py 100.0 7.4E-60 2.5E-64 417.0 30.4 267 1-278 33-299 (303)
8 3dwg_A Cysteine synthase B; su 100.0 2.2E-60 7.6E-65 423.9 25.5 265 1-274 45-311 (325)
9 2pqm_A Cysteine synthase; OASS 100.0 5.1E-60 1.7E-64 424.5 26.2 274 1-276 50-324 (343)
10 1ve1_A O-acetylserine sulfhydr 100.0 3.4E-59 1.2E-63 413.1 28.3 269 1-272 32-302 (304)
11 2egu_A Cysteine synthase; O-ac 100.0 1.3E-59 4.5E-64 416.5 24.4 269 1-272 37-305 (308)
12 1jbq_A B, cystathionine beta-s 100.0 1.1E-57 3.8E-62 418.6 33.8 276 1-278 133-416 (435)
13 1o58_A O-acetylserine sulfhydr 100.0 4E-58 1.4E-62 406.0 27.7 263 1-268 39-302 (303)
14 3pc3_A CG1753, isoform A; CBS, 100.0 2.3E-56 7.8E-61 422.2 31.9 275 1-277 85-367 (527)
15 3l6b_A Serine racemase; pyrido 100.0 7.6E-55 2.6E-59 391.2 21.6 261 1-268 48-321 (346)
16 4h27_A L-serine dehydratase/L- 100.0 5.8E-53 2E-57 381.2 29.4 267 1-278 69-356 (364)
17 2gn0_A Threonine dehydratase c 100.0 2.3E-54 8E-59 387.7 17.5 262 1-275 63-337 (342)
18 1p5j_A L-serine dehydratase; l 100.0 7.6E-53 2.6E-57 381.3 27.4 267 1-277 69-355 (372)
19 3aey_A Threonine synthase; PLP 100.0 5.6E-53 1.9E-57 380.3 25.1 259 1-269 53-327 (351)
20 2zsj_A Threonine synthase; PLP 100.0 8E-53 2.7E-57 379.4 25.7 259 1-269 55-329 (352)
21 2rkb_A Serine dehydratase-like 100.0 2.4E-52 8E-57 371.5 27.4 265 1-276 30-314 (318)
22 2d1f_A Threonine synthase; ami 100.0 9.6E-53 3.3E-57 379.7 25.1 259 1-269 61-336 (360)
23 3iau_A Threonine deaminase; py 100.0 5.8E-53 2E-57 381.8 20.5 266 1-278 83-360 (366)
24 1ve5_A Threonine deaminase; ri 100.0 4.5E-53 1.5E-57 375.1 19.1 252 1-267 43-310 (311)
25 1v71_A Serine racemase, hypoth 100.0 7.5E-53 2.5E-57 375.5 20.4 260 1-275 49-321 (323)
26 1tdj_A Biosynthetic threonine 100.0 3.4E-52 1.2E-56 387.3 24.0 257 1-267 54-322 (514)
27 4d9i_A Diaminopropionate ammon 100.0 4.8E-52 1.7E-56 379.7 24.3 275 2-282 69-396 (398)
28 3ss7_X D-serine dehydratase; t 100.0 6.4E-52 2.2E-56 382.7 24.2 271 1-276 109-439 (442)
29 1f2d_A 1-aminocyclopropane-1-c 100.0 3.3E-52 1.1E-56 373.9 16.9 260 1-267 40-330 (341)
30 1wkv_A Cysteine synthase; homo 100.0 7.5E-51 2.6E-55 369.0 25.6 262 2-279 119-386 (389)
31 1j0a_A 1-aminocyclopropane-1-c 100.0 1.8E-51 6.3E-56 366.8 20.3 264 1-275 44-321 (325)
32 4d9b_A D-cysteine desulfhydras 100.0 2.2E-51 7.5E-56 368.4 18.7 260 1-267 55-336 (342)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 5.1E-50 1.8E-54 359.4 16.6 259 2-268 41-330 (338)
34 1e5x_A Threonine synthase; thr 100.0 1.6E-47 5.4E-52 356.8 22.6 259 1-269 155-442 (486)
35 1x1q_A Tryptophan synthase bet 100.0 3.6E-47 1.2E-51 349.3 21.0 263 1-268 101-409 (418)
36 1v8z_A Tryptophan synthase bet 100.0 3E-46 1E-50 340.8 24.8 261 1-268 74-380 (388)
37 1qop_B Tryptophan synthase bet 100.0 1.1E-46 3.8E-51 344.2 19.9 262 1-268 78-385 (396)
38 2o2e_A Tryptophan synthase bet 100.0 2.2E-45 7.5E-50 337.3 22.0 262 1-268 105-411 (422)
39 1vb3_A Threonine synthase; PLP 100.0 3.7E-43 1.3E-47 323.2 20.5 252 2-269 100-386 (428)
40 4f4f_A Threonine synthase; str 100.0 3.6E-39 1.2E-43 297.3 21.0 253 1-268 109-423 (468)
41 1kl7_A Threonine synthase; thr 100.0 2.4E-38 8.1E-43 295.2 21.5 261 1-268 116-458 (514)
42 3v7n_A Threonine synthase; ssg 100.0 1.8E-37 6.3E-42 286.0 17.7 253 1-268 122-442 (487)
43 3fwz_A Inner membrane protein 94.6 0.7 2.4E-05 34.5 11.9 97 31-169 8-105 (140)
44 1vp8_A Hypothetical protein AF 94.4 0.4 1.4E-05 38.1 10.0 78 1-84 20-106 (201)
45 3s2e_A Zinc-containing alcohol 92.8 1.1 3.8E-05 38.8 11.4 62 18-83 156-217 (340)
46 4b7c_A Probable oxidoreductase 92.7 0.89 3E-05 39.3 10.6 61 18-81 138-200 (336)
47 3jyn_A Quinone oxidoreductase; 92.6 0.81 2.8E-05 39.4 10.2 58 22-82 134-191 (325)
48 1kol_A Formaldehyde dehydrogen 92.3 1.5 5.2E-05 38.9 11.8 59 19-80 176-234 (398)
49 3qwb_A Probable quinone oxidor 92.3 1.4 4.6E-05 38.1 11.2 59 22-83 142-200 (334)
50 3gaz_A Alcohol dehydrogenase s 92.2 1.3 4.6E-05 38.4 11.1 57 19-79 140-197 (343)
51 4dup_A Quinone oxidoreductase; 92.2 0.97 3.3E-05 39.5 10.3 61 19-82 157-218 (353)
52 4eye_A Probable oxidoreductase 92.2 0.8 2.7E-05 39.8 9.6 60 19-81 149-209 (342)
53 3tqh_A Quinone oxidoreductase; 92.1 1 3.6E-05 38.6 10.2 61 18-82 142-202 (321)
54 3uog_A Alcohol dehydrogenase; 92.1 1.1 3.8E-05 39.3 10.5 60 19-82 179-239 (363)
55 4a2c_A Galactitol-1-phosphate 91.3 1.9 6.5E-05 37.2 11.2 62 20-84 152-213 (346)
56 3gms_A Putative NADPH:quinone 90.9 1.1 3.6E-05 39.0 9.0 59 21-82 137-195 (340)
57 4ej6_A Putative zinc-binding d 90.6 1.7 5.7E-05 38.3 10.1 61 19-82 173-233 (370)
58 3gqv_A Enoyl reductase; medium 90.5 1 3.4E-05 39.7 8.6 53 27-83 163-215 (371)
59 2j8z_A Quinone oxidoreductase; 90.3 2.6 8.7E-05 36.8 11.0 60 19-81 152-212 (354)
60 1v3u_A Leukotriene B4 12- hydr 90.1 3.3 0.00011 35.6 11.5 58 19-79 135-193 (333)
61 2c0c_A Zinc binding alcohol de 90.1 2.5 8.6E-05 37.0 10.8 57 22-81 157-213 (362)
62 3c85_A Putative glutathione-re 89.9 4.7 0.00016 31.2 11.3 95 32-168 41-138 (183)
63 1t57_A Conserved protein MTH16 89.8 1.6 5.4E-05 34.8 8.1 76 2-84 29-113 (206)
64 3fpc_A NADP-dependent alcohol 89.8 1.7 5.9E-05 37.8 9.5 60 19-81 157-216 (352)
65 1gu7_A Enoyl-[acyl-carrier-pro 89.8 1.7 5.7E-05 38.0 9.4 63 19-81 156-221 (364)
66 2eih_A Alcohol dehydrogenase; 89.8 2.7 9.1E-05 36.4 10.6 59 19-80 156-215 (343)
67 1pqw_A Polyketide synthase; ro 89.5 3.6 0.00012 32.3 10.5 55 22-79 32-86 (198)
68 1jvb_A NAD(H)-dependent alcoho 89.5 2.6 8.8E-05 36.6 10.3 60 19-81 161-221 (347)
69 3goh_A Alcohol dehydrogenase, 89.5 0.71 2.4E-05 39.6 6.6 59 18-81 132-190 (315)
70 3l9w_A Glutathione-regulated p 89.4 3 0.0001 37.4 10.9 96 31-168 5-101 (413)
71 1yb5_A Quinone oxidoreductase; 89.3 3.5 0.00012 35.9 11.1 59 19-80 160-219 (351)
72 1qor_A Quinone oxidoreductase; 89.3 3.4 0.00012 35.4 10.9 59 19-80 130-189 (327)
73 1h2b_A Alcohol dehydrogenase; 89.2 3.9 0.00013 35.7 11.3 60 18-81 174-236 (359)
74 1zsy_A Mitochondrial 2-enoyl t 89.0 1.9 6.3E-05 37.7 9.1 60 22-81 161-221 (357)
75 3two_A Mannitol dehydrogenase; 89.0 1.4 4.9E-05 38.2 8.3 59 19-81 167-225 (348)
76 3iup_A Putative NADPH:quinone 88.9 2.2 7.6E-05 37.6 9.6 52 29-83 171-223 (379)
77 2hcy_A Alcohol dehydrogenase 1 88.9 4.6 0.00016 34.9 11.5 59 19-80 160-218 (347)
78 1wly_A CAAR, 2-haloacrylate re 88.8 3.5 0.00012 35.4 10.7 59 19-80 135-194 (333)
79 4a0s_A Octenoyl-COA reductase/ 88.8 1.6 5.4E-05 39.4 8.7 120 24-168 216-335 (447)
80 2zb4_A Prostaglandin reductase 88.7 4.7 0.00016 35.0 11.5 56 22-80 152-211 (357)
81 1f8f_A Benzyl alcohol dehydrog 88.6 3.4 0.00012 36.1 10.6 58 22-82 184-241 (371)
82 3krt_A Crotonyl COA reductase; 88.6 1.8 6.3E-05 39.2 9.0 57 24-83 224-280 (456)
83 3pi7_A NADH oxidoreductase; gr 88.4 2.1 7.3E-05 37.1 9.0 50 31-83 167-216 (349)
84 3ip1_A Alcohol dehydrogenase, 88.0 4.5 0.00015 35.9 11.1 56 24-82 209-264 (404)
85 2d8a_A PH0655, probable L-thre 87.8 4 0.00014 35.3 10.4 57 19-80 159-216 (348)
86 1e3j_A NADP(H)-dependent ketos 87.4 4.1 0.00014 35.3 10.3 58 20-81 160-217 (352)
87 4gkb_A 3-oxoacyl-[acyl-carrier 87.4 3.1 0.00011 34.7 9.1 73 30-102 8-81 (258)
88 1vj0_A Alcohol dehydrogenase, 87.3 2.5 8.5E-05 37.3 8.8 59 19-81 185-245 (380)
89 2dph_A Formaldehyde dismutase; 87.1 5 0.00017 35.5 10.8 58 19-80 176-234 (398)
90 2j3h_A NADP-dependent oxidored 87.1 5.3 0.00018 34.4 10.8 59 19-80 145-205 (345)
91 2vn8_A Reticulon-4-interacting 87.1 3.7 0.00013 36.0 9.9 53 26-82 181-233 (375)
92 1xa0_A Putative NADPH dependen 86.9 1.4 4.8E-05 37.9 6.9 58 21-81 141-199 (328)
93 3fbg_A Putative arginate lyase 86.6 3.4 0.00012 35.8 9.2 57 22-81 138-200 (346)
94 1rjw_A ADH-HT, alcohol dehydro 86.6 5 0.00017 34.6 10.3 52 25-80 161-212 (339)
95 2cdc_A Glucose dehydrogenase g 86.0 3.4 0.00011 36.1 9.0 57 23-80 166-231 (366)
96 1iz0_A Quinone oxidoreductase; 85.7 2.3 7.8E-05 36.1 7.5 54 23-80 121-174 (302)
97 1piw_A Hypothetical zinc-type 85.7 2.5 8.4E-05 36.9 7.9 59 19-81 170-228 (360)
98 1tt7_A YHFP; alcohol dehydroge 85.6 1.6 5.5E-05 37.5 6.5 57 21-80 142-199 (330)
99 2b5w_A Glucose dehydrogenase; 85.4 2.9 0.0001 36.4 8.2 50 30-80 174-226 (357)
100 4eez_A Alcohol dehydrogenase 1 85.0 5.3 0.00018 34.4 9.7 61 20-84 155-216 (348)
101 3nx4_A Putative oxidoreductase 84.9 1.9 6.6E-05 36.9 6.7 57 22-81 139-196 (324)
102 3hut_A Putative branched-chain 84.9 17 0.00059 30.8 13.1 134 31-170 74-228 (358)
103 3tpf_A Otcase, ornithine carba 84.5 7.5 0.00026 33.3 10.1 62 22-83 139-206 (307)
104 3dbi_A Sugar-binding transcrip 84.5 18 0.0006 30.7 14.9 41 126-169 234-278 (338)
105 3uko_A Alcohol dehydrogenase c 84.0 5.3 0.00018 35.0 9.3 57 22-81 187-243 (378)
106 1pl8_A Human sorbitol dehydrog 83.1 4.3 0.00015 35.3 8.3 57 20-80 163-220 (356)
107 1uuf_A YAHK, zinc-type alcohol 82.6 4.4 0.00015 35.5 8.2 59 19-81 185-243 (369)
108 4fn4_A Short chain dehydrogena 82.5 5.6 0.00019 33.1 8.3 72 31-102 9-82 (254)
109 3h7a_A Short chain dehydrogena 82.1 18 0.00062 29.4 11.4 71 31-101 9-81 (252)
110 2q2v_A Beta-D-hydroxybutyrate 81.6 12 0.00041 30.5 10.1 70 31-101 6-76 (255)
111 1c1d_A L-phenylalanine dehydro 81.2 6.5 0.00022 34.5 8.6 65 11-79 155-221 (355)
112 3uf0_A Short-chain dehydrogena 81.1 9.4 0.00032 31.7 9.4 55 30-84 32-86 (273)
113 3e03_A Short chain dehydrogena 81.1 15 0.00052 30.3 10.7 72 31-102 8-88 (274)
114 3ek2_A Enoyl-(acyl-carrier-pro 80.5 9 0.00031 31.4 9.0 73 30-103 15-91 (271)
115 3jv7_A ADH-A; dehydrogenase, n 80.4 11 0.00038 32.3 9.9 54 25-82 168-222 (345)
116 3nrc_A Enoyl-[acyl-carrier-pro 80.2 11 0.00037 31.3 9.5 70 31-102 28-101 (280)
117 3egc_A Putative ribose operon 80.1 23 0.0008 29.0 13.9 34 134-169 185-222 (291)
118 3l6u_A ABC-type sugar transpor 79.8 24 0.00081 28.9 13.8 41 126-169 187-228 (293)
119 4g81_D Putative hexonate dehyd 79.7 7.5 0.00026 32.3 8.1 73 30-102 10-84 (255)
120 3o74_A Fructose transport syst 79.5 23 0.00078 28.6 16.0 42 126-169 171-215 (272)
121 3r1i_A Short-chain type dehydr 79.5 10 0.00035 31.5 9.1 72 31-102 34-107 (276)
122 3gv0_A Transcriptional regulat 79.2 25 0.00085 28.8 17.6 35 134-170 187-225 (288)
123 1ml4_A Aspartate transcarbamoy 78.9 12 0.00043 32.0 9.4 60 22-83 149-213 (308)
124 1pvv_A Otcase, ornithine carba 78.8 9 0.00031 33.0 8.5 61 22-83 149-215 (315)
125 3kvo_A Hydroxysteroid dehydrog 78.8 19 0.00064 31.2 10.8 73 30-102 46-127 (346)
126 3ezl_A Acetoacetyl-COA reducta 78.6 12 0.00041 30.4 9.1 74 30-103 14-90 (256)
127 1p0f_A NADP-dependent alcohol 78.0 7.4 0.00025 34.0 8.0 56 22-80 185-240 (373)
128 2h6e_A ADH-4, D-arabinose 1-de 77.8 7.6 0.00026 33.4 8.0 51 25-80 168-220 (344)
129 3grk_A Enoyl-(acyl-carrier-pro 77.7 8.1 0.00028 32.5 8.0 70 31-102 33-107 (293)
130 4ekn_B Aspartate carbamoyltran 77.7 7.8 0.00027 33.2 7.8 60 22-83 145-210 (306)
131 3gem_A Short chain dehydrogena 77.4 17 0.0006 29.8 9.8 69 31-102 29-97 (260)
132 3edm_A Short chain dehydrogena 77.2 14 0.00049 30.2 9.3 72 31-102 10-84 (259)
133 3h75_A Periplasmic sugar-bindi 77.2 33 0.0011 29.1 15.0 43 125-170 196-242 (350)
134 2cf5_A Atccad5, CAD, cinnamyl 77.2 7.7 0.00026 33.7 7.9 59 19-81 170-230 (357)
135 3ucx_A Short chain dehydrogena 76.9 14 0.00048 30.3 9.1 72 31-102 13-86 (264)
136 1e3i_A Alcohol dehydrogenase, 76.8 9.2 0.00031 33.4 8.3 56 22-80 189-244 (376)
137 3qiv_A Short-chain dehydrogena 76.7 14 0.00048 29.9 9.0 71 31-101 11-83 (253)
138 2jhf_A Alcohol dehydrogenase E 76.6 9.5 0.00032 33.3 8.4 56 22-80 185-240 (374)
139 3s8m_A Enoyl-ACP reductase; ro 76.5 18 0.00061 32.5 10.1 86 17-102 48-149 (422)
140 3k4h_A Putative transcriptiona 76.5 30 0.001 28.3 16.1 34 134-169 191-228 (292)
141 1cdo_A Alcohol dehydrogenase; 76.5 10 0.00036 33.0 8.6 56 22-80 186-241 (374)
142 3ijr_A Oxidoreductase, short c 76.4 12 0.00041 31.4 8.6 73 30-102 48-123 (291)
143 4dvj_A Putative zinc-dependent 76.3 8 0.00027 33.7 7.7 57 22-81 160-222 (363)
144 4ep1_A Otcase, ornithine carba 76.2 10 0.00035 33.0 8.2 61 22-83 173-239 (340)
145 3is3_A 17BETA-hydroxysteroid d 76.1 14 0.00047 30.5 8.9 72 31-102 20-94 (270)
146 3lyl_A 3-oxoacyl-(acyl-carrier 76.1 14 0.00048 29.8 8.8 72 31-102 7-80 (247)
147 3u5t_A 3-oxoacyl-[acyl-carrier 75.9 21 0.00072 29.4 10.0 72 31-102 29-103 (267)
148 3qlj_A Short chain dehydrogena 75.8 16 0.00055 31.0 9.4 72 31-102 29-112 (322)
149 3ksu_A 3-oxoacyl-acyl carrier 75.7 19 0.00064 29.6 9.6 72 31-102 13-89 (262)
150 1yb1_A 17-beta-hydroxysteroid 75.7 16 0.00055 30.1 9.2 73 30-102 32-106 (272)
151 3llv_A Exopolyphosphatase-rela 75.6 14 0.00049 26.8 8.0 49 32-83 8-56 (141)
152 1vlv_A Otcase, ornithine carba 75.6 13 0.00046 32.0 8.7 60 22-83 161-228 (325)
153 2ae2_A Protein (tropinone redu 75.2 20 0.00067 29.2 9.6 72 31-102 11-84 (260)
154 3sc4_A Short chain dehydrogena 75.2 26 0.00089 29.1 10.5 72 31-102 11-91 (285)
155 1yqd_A Sinapyl alcohol dehydro 75.0 11 0.00037 32.8 8.3 58 19-80 177-236 (366)
156 2rhc_B Actinorhodin polyketide 74.7 17 0.00058 30.1 9.1 72 31-102 24-97 (277)
157 3qk7_A Transcriptional regulat 74.6 35 0.0012 28.1 14.5 41 126-169 179-223 (294)
158 1duv_G Octase-1, ornithine tra 74.6 14 0.00047 32.1 8.5 52 32-83 157-216 (333)
159 4iin_A 3-ketoacyl-acyl carrier 74.6 14 0.00049 30.3 8.6 72 30-101 30-104 (271)
160 4e3z_A Putative oxidoreductase 74.5 19 0.00065 29.6 9.4 71 31-101 28-101 (272)
161 3td9_A Branched chain amino ac 74.5 39 0.0013 28.7 14.8 147 13-170 69-238 (366)
162 3gaf_A 7-alpha-hydroxysteroid 74.4 12 0.0004 30.7 7.9 72 31-102 14-87 (256)
163 3tfo_A Putative 3-oxoacyl-(acy 74.4 16 0.00053 30.2 8.7 72 31-102 6-79 (264)
164 2i6u_A Otcase, ornithine carba 74.4 14 0.00048 31.6 8.5 60 22-83 142-209 (307)
165 3s55_A Putative short-chain de 74.0 11 0.00037 31.3 7.7 72 31-102 12-97 (281)
166 3osu_A 3-oxoacyl-[acyl-carrier 74.0 16 0.00054 29.6 8.6 72 31-102 6-80 (246)
167 3a28_C L-2.3-butanediol dehydr 74.0 13 0.00045 30.3 8.2 71 31-101 4-78 (258)
168 3huu_A Transcription regulator 73.9 37 0.0012 28.1 14.3 34 134-169 201-238 (305)
169 3csu_A Protein (aspartate carb 73.8 10 0.00034 32.6 7.4 60 22-83 148-213 (310)
170 4ibo_A Gluconate dehydrogenase 73.8 14 0.00047 30.6 8.3 72 31-102 28-101 (271)
171 2fzw_A Alcohol dehydrogenase c 73.7 10 0.00034 33.1 7.7 56 22-80 184-239 (373)
172 3snr_A Extracellular ligand-bi 73.7 39 0.0013 28.3 13.9 146 14-170 58-224 (362)
173 3v2g_A 3-oxoacyl-[acyl-carrier 73.7 19 0.00064 29.8 9.1 72 31-102 33-107 (271)
174 3jy6_A Transcriptional regulat 73.5 35 0.0012 27.7 12.5 34 134-169 180-217 (276)
175 4iiu_A 3-oxoacyl-[acyl-carrier 73.3 17 0.00057 29.9 8.7 72 31-102 28-102 (267)
176 4dmm_A 3-oxoacyl-[acyl-carrier 73.1 13 0.00043 30.8 7.9 72 31-102 30-104 (269)
177 3oid_A Enoyl-[acyl-carrier-pro 73.0 17 0.00058 29.7 8.6 72 31-102 6-80 (258)
178 4fc7_A Peroxisomal 2,4-dienoyl 73.0 37 0.0013 28.0 10.8 32 31-62 29-60 (277)
179 1geg_A Acetoin reductase; SDR 72.9 20 0.00068 29.1 9.0 72 31-102 4-77 (256)
180 3l49_A ABC sugar (ribose) tran 72.6 37 0.0013 27.6 19.1 144 17-169 54-224 (291)
181 4da9_A Short-chain dehydrogena 72.5 11 0.00039 31.3 7.5 72 31-102 31-105 (280)
182 3tjr_A Short chain dehydrogena 72.5 15 0.00052 30.9 8.4 71 31-101 33-105 (301)
183 3e8x_A Putative NAD-dependent 72.4 11 0.00038 30.2 7.2 51 31-84 23-74 (236)
184 2ew8_A (S)-1-phenylethanol deh 72.3 20 0.00067 29.1 8.8 70 31-101 9-79 (249)
185 3oig_A Enoyl-[acyl-carrier-pro 72.2 31 0.0011 28.0 10.1 71 31-102 9-85 (266)
186 1dxh_A Ornithine carbamoyltran 72.1 14 0.00047 32.1 7.9 52 32-83 157-216 (335)
187 1sny_A Sniffer CG10964-PA; alp 72.1 14 0.00048 30.1 7.9 53 31-83 23-78 (267)
188 3ic5_A Putative saccharopine d 72.0 18 0.0006 25.0 7.5 50 31-84 7-57 (118)
189 1edo_A Beta-keto acyl carrier 71.9 26 0.00089 27.9 9.4 72 31-102 3-77 (244)
190 4a27_A Synaptic vesicle membra 71.6 13 0.00043 32.1 7.8 56 22-82 136-192 (349)
191 3sju_A Keto reductase; short-c 71.6 15 0.0005 30.6 8.0 72 31-102 26-99 (279)
192 3imf_A Short chain dehydrogena 71.6 9.4 0.00032 31.3 6.7 72 31-102 8-81 (257)
193 1sby_A Alcohol dehydrogenase; 71.6 30 0.001 27.9 9.8 52 31-83 7-61 (254)
194 2r6j_A Eugenol synthase 1; phe 71.5 14 0.00048 31.0 8.0 54 31-84 13-67 (318)
195 2gas_A Isoflavone reductase; N 71.3 9.2 0.00032 31.9 6.7 54 31-84 4-64 (307)
196 3afn_B Carbonyl reductase; alp 71.0 32 0.0011 27.5 9.9 54 31-84 9-64 (258)
197 3zu3_A Putative reductase YPO4 70.9 57 0.0019 29.0 14.0 90 14-103 31-136 (405)
198 3m6i_A L-arabinitol 4-dehydrog 70.9 10 0.00036 32.8 7.1 55 19-76 170-224 (363)
199 3v8b_A Putative dehydrogenase, 70.6 14 0.00049 30.7 7.7 72 31-102 30-103 (283)
200 3cxt_A Dehydrogenase with diff 70.6 20 0.00067 30.1 8.6 72 31-102 36-109 (291)
201 2hq1_A Glucose/ribitol dehydro 70.4 39 0.0013 26.9 10.2 53 31-83 7-61 (247)
202 4imr_A 3-oxoacyl-(acyl-carrier 70.3 28 0.00094 28.8 9.4 53 31-83 35-88 (275)
203 1g0o_A Trihydroxynaphthalene r 69.9 22 0.00074 29.5 8.7 71 31-101 31-104 (283)
204 2w37_A Ornithine carbamoyltran 69.9 16 0.00053 32.1 7.8 60 22-83 170-237 (359)
205 3awd_A GOX2181, putative polyo 69.9 21 0.00072 28.8 8.5 71 31-101 15-87 (260)
206 1ja9_A 4HNR, 1,3,6,8-tetrahydr 69.8 21 0.0007 29.1 8.5 72 31-102 23-97 (274)
207 3r3s_A Oxidoreductase; structu 69.7 18 0.00063 30.2 8.2 72 31-102 51-126 (294)
208 3k9c_A Transcriptional regulat 69.6 45 0.0015 27.3 15.2 35 134-170 184-222 (289)
209 1gee_A Glucose 1-dehydrogenase 69.6 22 0.00075 28.8 8.5 71 31-101 9-82 (261)
210 2uvd_A 3-oxoacyl-(acyl-carrier 69.6 18 0.00062 29.2 8.0 71 31-101 6-79 (246)
211 3ged_A Short-chain dehydrogena 69.3 25 0.00087 28.8 8.8 69 31-102 4-73 (247)
212 2jah_A Clavulanic acid dehydro 69.2 23 0.0008 28.6 8.6 71 31-101 9-81 (247)
213 3rkr_A Short chain oxidoreduct 69.2 25 0.00085 28.7 8.8 71 31-101 31-103 (262)
214 1zem_A Xylitol dehydrogenase; 69.1 19 0.00065 29.4 8.1 71 31-101 9-81 (262)
215 2c07_A 3-oxoacyl-(acyl-carrier 68.9 14 0.00049 30.6 7.3 73 30-102 45-119 (285)
216 4ggo_A Trans-2-enoyl-COA reduc 68.9 16 0.00053 32.6 7.6 73 30-102 51-138 (401)
217 3svt_A Short-chain type dehydr 68.7 24 0.00081 29.2 8.7 71 31-101 13-88 (281)
218 1wma_A Carbonyl reductase [NAD 68.7 20 0.00069 29.0 8.2 52 31-82 6-59 (276)
219 3tzq_B Short-chain type dehydr 68.5 47 0.0016 27.1 10.7 69 31-102 13-83 (271)
220 3qp9_A Type I polyketide synth 68.2 26 0.00088 32.3 9.4 59 26-84 248-322 (525)
221 3gd5_A Otcase, ornithine carba 68.2 21 0.00071 30.8 8.2 61 22-83 151-217 (323)
222 3t7c_A Carveol dehydrogenase; 67.9 18 0.00061 30.3 7.8 72 31-102 30-115 (299)
223 3cs3_A Sugar-binding transcrip 67.8 47 0.0016 26.9 11.8 33 134-168 176-212 (277)
224 3sx2_A Putative 3-ketoacyl-(ac 67.7 17 0.00058 30.0 7.5 72 31-102 15-100 (278)
225 3i6i_A Putative leucoanthocyan 67.7 14 0.00046 31.6 7.1 54 31-84 12-69 (346)
226 2izz_A Pyrroline-5-carboxylate 67.7 56 0.0019 27.7 12.6 119 33-173 25-147 (322)
227 3u0b_A Oxidoreductase, short c 67.6 28 0.00095 31.4 9.4 73 29-102 213-285 (454)
228 3rih_A Short chain dehydrogena 67.2 22 0.00075 29.8 8.2 73 30-102 42-117 (293)
229 3i1j_A Oxidoreductase, short c 67.2 46 0.0016 26.5 11.1 31 31-61 16-46 (247)
230 2pd4_A Enoyl-[acyl-carrier-pro 66.7 39 0.0013 27.7 9.6 71 31-102 8-82 (275)
231 4fgs_A Probable dehydrogenase 66.7 24 0.00083 29.5 8.2 70 31-103 31-102 (273)
232 3icc_A Putative 3-oxoacyl-(acy 66.6 46 0.0016 26.6 9.9 54 31-84 9-64 (255)
233 2dq4_A L-threonine 3-dehydroge 66.3 20 0.00069 30.7 8.0 54 19-78 155-210 (343)
234 2fr1_A Erythromycin synthase, 66.0 31 0.0011 31.4 9.5 59 26-84 223-286 (486)
235 4egf_A L-xylulose reductase; s 65.9 18 0.00061 29.7 7.3 72 31-102 22-96 (266)
236 3pxx_A Carveol dehydrogenase; 65.9 20 0.00068 29.6 7.7 72 31-102 12-97 (287)
237 1zq6_A Otcase, ornithine carba 65.9 19 0.00063 31.6 7.5 44 40-83 207-257 (359)
238 1fmc_A 7 alpha-hydroxysteroid 65.8 21 0.00073 28.6 7.7 53 31-83 13-66 (255)
239 3pk0_A Short-chain dehydrogena 65.7 20 0.00069 29.3 7.5 72 31-102 12-86 (262)
240 3tox_A Short chain dehydrogena 65.6 16 0.00054 30.4 6.9 72 31-102 10-83 (280)
241 3gxh_A Putative phosphatase (D 65.6 40 0.0014 25.2 9.3 85 59-145 23-107 (157)
242 3pgx_A Carveol dehydrogenase; 65.6 20 0.00067 29.7 7.5 72 31-102 17-103 (280)
243 3l4b_C TRKA K+ channel protien 65.5 48 0.0016 26.1 11.7 49 33-84 3-52 (218)
244 1h5q_A NADP-dependent mannitol 65.5 49 0.0017 26.6 9.9 72 31-102 16-90 (265)
245 1zmt_A Haloalcohol dehalogenas 65.2 13 0.00044 30.3 6.2 52 31-82 3-54 (254)
246 1ae1_A Tropinone reductase-I; 65.2 30 0.001 28.4 8.6 72 31-102 23-96 (273)
247 2gk4_A Conserved hypothetical 65.0 11 0.00037 30.9 5.5 25 38-62 28-52 (232)
248 4hp8_A 2-deoxy-D-gluconate 3-d 65.0 23 0.00079 29.2 7.7 53 30-83 10-62 (247)
249 3gdg_A Probable NADP-dependent 64.8 35 0.0012 27.7 8.9 72 31-102 22-99 (267)
250 2b4q_A Rhamnolipids biosynthes 64.8 27 0.00093 28.8 8.3 71 31-102 31-103 (276)
251 3ipc_A ABC transporter, substr 64.6 63 0.0021 27.1 12.7 133 31-170 71-227 (356)
252 2z5l_A Tylkr1, tylactone synth 64.6 34 0.0011 31.4 9.4 59 26-84 256-319 (511)
253 1jx6_A LUXP protein; protein-l 64.5 62 0.0021 27.1 14.9 42 125-169 225-267 (342)
254 3rwb_A TPLDH, pyridoxal 4-dehy 64.5 37 0.0013 27.4 8.9 70 31-102 8-78 (247)
255 2zat_A Dehydrogenase/reductase 64.4 29 0.00098 28.2 8.3 53 31-83 16-69 (260)
256 3uve_A Carveol dehydrogenase ( 64.3 21 0.00072 29.6 7.5 72 31-102 13-102 (286)
257 2qq5_A DHRS1, dehydrogenase/re 64.3 31 0.0011 28.0 8.5 70 31-100 7-78 (260)
258 4fcc_A Glutamate dehydrogenase 64.0 48 0.0016 29.9 10.0 51 10-60 215-265 (450)
259 4a8t_A Putrescine carbamoyltra 63.6 30 0.001 30.0 8.3 54 31-84 177-236 (339)
260 3k31_A Enoyl-(acyl-carrier-pro 63.5 25 0.00087 29.4 7.9 71 31-102 32-106 (296)
261 1w6u_A 2,4-dienoyl-COA reducta 63.5 34 0.0012 28.3 8.7 72 31-102 28-102 (302)
262 3tsc_A Putative oxidoreductase 63.5 25 0.00086 28.9 7.8 72 31-102 13-99 (277)
263 3oec_A Carveol dehydrogenase ( 63.5 22 0.00074 30.2 7.5 72 31-102 48-133 (317)
264 3ftp_A 3-oxoacyl-[acyl-carrier 63.3 20 0.00067 29.6 7.0 71 31-102 30-103 (270)
265 3tpc_A Short chain alcohol deh 63.1 48 0.0016 26.8 9.4 70 31-102 9-79 (257)
266 3hcw_A Maltose operon transcri 63.0 62 0.0021 26.5 16.4 42 126-169 181-228 (295)
267 2pnf_A 3-oxoacyl-[acyl-carrier 62.7 56 0.0019 25.9 9.9 72 31-102 9-83 (248)
268 3l6e_A Oxidoreductase, short-c 62.5 33 0.0011 27.5 8.1 32 31-62 5-36 (235)
269 3ioy_A Short-chain dehydrogena 62.5 40 0.0014 28.5 9.0 72 31-102 10-85 (319)
270 4eue_A Putative reductase CA_C 62.5 85 0.0029 27.9 13.4 83 20-102 51-149 (418)
271 3gyb_A Transcriptional regulat 62.3 60 0.0021 26.2 15.4 95 71-169 112-212 (280)
272 2g1u_A Hypothetical protein TM 62.1 4.5 0.00015 30.4 2.6 96 31-169 20-118 (155)
273 4a8p_A Putrescine carbamoyltra 62.0 34 0.0012 29.9 8.4 54 31-84 155-214 (355)
274 3op4_A 3-oxoacyl-[acyl-carrier 61.9 31 0.0011 27.8 8.0 68 31-102 11-81 (248)
275 1uls_A Putative 3-oxoacyl-acyl 61.7 61 0.0021 26.0 10.0 67 31-101 7-74 (245)
276 3h2s_A Putative NADH-flavin re 61.6 25 0.00085 27.5 7.2 51 31-84 2-52 (224)
277 1vl8_A Gluconate 5-dehydrogena 61.5 34 0.0011 28.0 8.2 72 30-101 22-96 (267)
278 3grp_A 3-oxoacyl-(acyl carrier 61.5 39 0.0013 27.7 8.6 68 31-101 29-98 (266)
279 2o23_A HADH2 protein; HSD17B10 61.4 62 0.0021 26.0 10.1 69 31-101 14-83 (265)
280 1wwk_A Phosphoglycerate dehydr 61.4 70 0.0024 27.0 10.3 105 31-159 143-249 (307)
281 3d4o_A Dipicolinate synthase s 61.3 68 0.0023 26.7 10.2 65 12-80 137-202 (293)
282 3ksm_A ABC-type sugar transpor 61.3 61 0.0021 25.9 18.1 41 126-169 179-221 (276)
283 1xq1_A Putative tropinone redu 61.2 33 0.0011 27.8 8.0 53 31-83 16-69 (266)
284 3c1o_A Eugenol synthase; pheny 60.9 19 0.00066 30.2 6.7 54 31-84 6-65 (321)
285 1x1t_A D(-)-3-hydroxybutyrate 60.7 43 0.0015 27.1 8.7 71 31-101 6-80 (260)
286 3gk3_A Acetoacetyl-COA reducta 60.4 21 0.00073 29.2 6.7 72 31-102 27-101 (269)
287 2p91_A Enoyl-[acyl-carrier-pro 60.4 37 0.0013 28.0 8.3 71 31-102 23-97 (285)
288 3u9l_A 3-oxoacyl-[acyl-carrier 60.0 61 0.0021 27.5 9.8 72 31-102 7-85 (324)
289 2bd0_A Sepiapterin reductase; 59.9 45 0.0015 26.5 8.6 72 31-102 4-84 (244)
290 2wyu_A Enoyl-[acyl carrier pro 59.8 47 0.0016 26.9 8.8 71 31-102 10-84 (261)
291 1tjy_A Sugar transport protein 59.7 75 0.0026 26.4 14.5 42 125-169 180-222 (316)
292 3l77_A Short-chain alcohol deh 59.5 22 0.00075 28.3 6.5 71 31-101 4-77 (235)
293 3sg0_A Extracellular ligand-bi 59.3 81 0.0028 26.6 14.4 145 14-170 78-248 (386)
294 3kzv_A Uncharacterized oxidore 59.3 20 0.00069 29.1 6.4 69 31-102 4-76 (254)
295 1qyd_A Pinoresinol-lariciresin 59.1 23 0.0008 29.4 6.9 54 31-84 6-64 (313)
296 4e6p_A Probable sorbitol dehyd 59.1 50 0.0017 26.7 8.8 69 31-102 10-80 (259)
297 1xg5_A ARPG836; short chain de 58.9 55 0.0019 26.8 9.1 53 31-83 34-89 (279)
298 3ai3_A NADPH-sorbose reductase 58.8 43 0.0015 27.2 8.3 32 31-62 9-40 (263)
299 3ctm_A Carbonyl reductase; alc 58.8 43 0.0015 27.4 8.4 53 31-83 36-89 (279)
300 4dqx_A Probable oxidoreductase 58.7 48 0.0017 27.3 8.7 69 31-102 29-99 (277)
301 1qyc_A Phenylcoumaran benzylic 58.7 25 0.00085 29.2 7.0 54 31-84 6-65 (308)
302 4g81_D Putative hexonate dehyd 58.6 75 0.0026 26.1 10.3 74 67-146 24-97 (255)
303 3lf2_A Short chain oxidoreduct 58.6 72 0.0025 25.9 11.3 31 31-61 10-40 (265)
304 3gg9_A D-3-phosphoglycerate de 58.5 62 0.0021 28.1 9.6 115 31-170 161-277 (352)
305 4dry_A 3-oxoacyl-[acyl-carrier 58.3 77 0.0026 26.1 10.6 31 31-61 35-65 (281)
306 3kkj_A Amine oxidase, flavin-c 57.9 11 0.00037 29.8 4.4 28 33-60 5-32 (336)
307 1xu9_A Corticosteroid 11-beta- 57.8 47 0.0016 27.3 8.5 53 31-83 30-84 (286)
308 2cfc_A 2-(R)-hydroxypropyl-COM 57.7 25 0.00086 28.1 6.7 32 31-62 4-35 (250)
309 3rot_A ABC sugar transporter, 57.3 78 0.0027 25.8 16.1 41 126-169 180-225 (297)
310 2aef_A Calcium-gated potassium 57.3 66 0.0023 25.5 9.1 48 31-83 10-57 (234)
311 3v2h_A D-beta-hydroxybutyrate 57.2 76 0.0026 26.1 9.7 72 31-102 27-102 (281)
312 4hvk_A Probable cysteine desul 57.1 51 0.0017 27.8 8.9 55 31-85 61-121 (382)
313 3grf_A Ornithine carbamoyltran 56.9 46 0.0016 28.7 8.3 45 39-83 172-226 (328)
314 3n74_A 3-ketoacyl-(acyl-carrie 56.8 45 0.0015 26.9 8.1 68 31-101 11-80 (261)
315 3slk_A Polyketide synthase ext 56.7 46 0.0016 32.4 9.3 58 27-84 528-591 (795)
316 2wm3_A NMRA-like family domain 56.7 44 0.0015 27.6 8.2 53 31-84 7-60 (299)
317 3aoe_E Glutamate dehydrogenase 56.6 57 0.0019 29.1 9.1 52 11-63 199-251 (419)
318 1u7z_A Coenzyme A biosynthesis 56.3 17 0.00058 29.6 5.2 24 38-61 33-56 (226)
319 1iy8_A Levodione reductase; ox 56.1 48 0.0016 27.0 8.2 71 31-101 15-89 (267)
320 3q98_A Transcarbamylase; rossm 55.9 27 0.00091 31.1 6.8 44 40-83 209-258 (399)
321 4eso_A Putative oxidoreductase 55.5 61 0.0021 26.2 8.7 69 31-102 10-80 (255)
322 1x13_A NAD(P) transhydrogenase 55.5 22 0.00077 31.5 6.3 48 31-81 173-220 (401)
323 3i4f_A 3-oxoacyl-[acyl-carrier 55.4 27 0.00093 28.3 6.5 71 31-101 9-82 (264)
324 3gbv_A Putative LACI-family tr 55.4 83 0.0028 25.5 12.4 41 125-169 191-232 (304)
325 2e7j_A SEP-tRNA:Cys-tRNA synth 55.2 41 0.0014 28.4 8.0 51 32-83 71-121 (371)
326 3m1a_A Putative dehydrogenase; 55.2 44 0.0015 27.4 7.9 69 31-101 7-76 (281)
327 1leh_A Leucine dehydrogenase; 55.1 56 0.0019 28.5 8.7 50 11-61 152-203 (364)
328 1oth_A Protein (ornithine tran 55.1 26 0.00088 30.2 6.4 60 22-83 149-215 (321)
329 3f9t_A TDC, L-tyrosine decarbo 55.0 68 0.0023 27.1 9.4 55 31-85 87-153 (397)
330 3lop_A Substrate binding perip 54.7 96 0.0033 26.1 10.6 132 31-169 75-229 (364)
331 3ce6_A Adenosylhomocysteinase; 54.7 48 0.0016 30.3 8.5 97 24-148 269-365 (494)
332 3m9w_A D-xylose-binding peripl 54.5 89 0.0031 25.7 17.1 40 127-168 180-221 (313)
333 3rku_A Oxidoreductase YMR226C; 54.5 65 0.0022 26.7 8.9 30 31-60 35-67 (287)
334 3dii_A Short-chain dehydrogena 54.2 68 0.0023 25.7 8.8 68 31-102 4-73 (247)
335 4eyg_A Twin-arginine transloca 54.0 98 0.0033 26.0 12.5 133 31-169 74-230 (368)
336 2bma_A Glutamate dehydrogenase 53.9 50 0.0017 30.0 8.3 52 11-62 233-284 (470)
337 3gvc_A Oxidoreductase, probabl 53.7 50 0.0017 27.2 8.0 69 31-102 31-101 (277)
338 2g76_A 3-PGDH, D-3-phosphoglyc 53.7 95 0.0033 26.6 9.9 104 31-158 166-271 (335)
339 3o38_A Short chain dehydrogena 53.6 86 0.003 25.2 10.5 32 31-62 24-56 (266)
340 2ph3_A 3-oxoacyl-[acyl carrier 53.3 45 0.0015 26.4 7.5 51 31-81 3-55 (245)
341 1qsg_A Enoyl-[acyl-carrier-pro 53.1 89 0.003 25.2 10.4 71 31-102 11-85 (265)
342 2et6_A (3R)-hydroxyacyl-COA de 52.9 1E+02 0.0035 28.8 10.7 70 30-102 323-393 (604)
343 8abp_A L-arabinose-binding pro 52.9 92 0.0032 25.3 13.0 44 125-169 186-232 (306)
344 2ekp_A 2-deoxy-D-gluconate 3-d 52.8 48 0.0016 26.4 7.6 49 31-84 4-52 (239)
345 4g2n_A D-isomer specific 2-hyd 52.6 64 0.0022 27.9 8.7 104 31-158 174-279 (345)
346 4fn4_A Short chain dehydrogena 52.4 85 0.0029 25.7 9.1 73 67-145 22-94 (254)
347 2fwm_X 2,3-dihydro-2,3-dihydro 52.4 89 0.003 25.0 9.5 64 31-102 9-72 (250)
348 4evq_A Putative ABC transporte 52.2 92 0.0032 26.2 9.8 134 30-169 83-239 (375)
349 3sds_A Ornithine carbamoyltran 51.8 54 0.0019 28.6 8.0 52 32-83 190-250 (353)
350 4amu_A Ornithine carbamoyltran 51.8 1E+02 0.0034 27.0 9.7 60 22-83 174-243 (365)
351 1yxm_A Pecra, peroxisomal tran 51.7 66 0.0022 26.6 8.5 32 31-62 20-51 (303)
352 3mje_A AMPHB; rossmann fold, o 51.6 77 0.0026 28.9 9.4 55 30-84 240-299 (496)
353 1l7d_A Nicotinamide nucleotide 51.5 28 0.00096 30.5 6.3 47 31-80 173-219 (384)
354 3ak4_A NADH-dependent quinucli 51.4 51 0.0018 26.6 7.6 67 31-101 14-83 (263)
355 4dyv_A Short-chain dehydrogena 51.4 65 0.0022 26.4 8.3 68 31-102 30-100 (272)
356 1nff_A Putative oxidoreductase 51.4 53 0.0018 26.7 7.7 32 31-62 9-40 (260)
357 1xkq_A Short-chain reductase f 51.3 46 0.0016 27.3 7.4 32 31-62 8-39 (280)
358 3zv4_A CIS-2,3-dihydrobiphenyl 51.1 49 0.0017 27.2 7.5 69 31-102 7-77 (281)
359 3k92_A NAD-GDH, NAD-specific g 51.1 38 0.0013 30.3 7.0 51 11-62 202-253 (424)
360 2yfk_A Aspartate/ornithine car 51.0 34 0.0012 30.6 6.7 44 40-83 206-255 (418)
361 3aog_A Glutamate dehydrogenase 50.9 78 0.0027 28.5 9.1 52 11-63 216-268 (440)
362 3p19_A BFPVVD8, putative blue 50.8 73 0.0025 26.0 8.5 68 31-102 18-85 (266)
363 1hdc_A 3-alpha, 20 beta-hydrox 50.7 69 0.0024 25.8 8.3 68 31-101 7-76 (254)
364 3gvx_A Glycerate dehydrogenase 50.6 44 0.0015 28.2 7.1 111 31-170 123-235 (290)
365 2d1y_A Hypothetical protein TT 50.3 97 0.0033 24.9 9.6 32 31-62 8-39 (256)
366 3ppi_A 3-hydroxyacyl-COA dehyd 50.3 71 0.0024 26.1 8.4 68 31-102 32-101 (281)
367 2tmg_A Protein (glutamate dehy 50.0 1.1E+02 0.0037 27.3 9.8 51 11-62 190-242 (415)
368 3nav_A Tryptophan synthase alp 49.8 24 0.00084 29.5 5.3 93 8-108 79-179 (271)
369 3d3j_A Enhancer of mRNA-decapp 49.8 1.2E+02 0.004 25.7 9.7 32 31-62 134-168 (306)
370 3rd5_A Mypaa.01249.C; ssgcid, 49.6 82 0.0028 25.9 8.7 51 31-84 18-69 (291)
371 1xhl_A Short-chain dehydrogena 49.5 56 0.0019 27.2 7.7 32 31-62 28-59 (297)
372 2bgk_A Rhizome secoisolaricire 49.4 1E+02 0.0035 24.8 9.6 31 31-61 18-48 (278)
373 1pg5_A Aspartate carbamoyltran 49.3 16 0.00054 31.2 4.1 58 22-83 143-205 (299)
374 1a3w_A Pyruvate kinase; allost 49.2 1.1E+02 0.0039 27.9 10.0 123 45-173 283-428 (500)
375 3o26_A Salutaridine reductase; 49.2 1.1E+02 0.0037 25.1 14.2 70 31-101 14-88 (311)
376 2dbq_A Glyoxylate reductase; D 49.1 1.2E+02 0.0043 25.7 10.4 104 31-158 151-256 (334)
377 1yde_A Retinal dehydrogenase/r 49.1 1.1E+02 0.0036 24.9 9.4 67 31-101 11-79 (270)
378 3slk_A Polyketide synthase ext 49.0 12 0.0004 36.6 3.6 39 22-60 339-377 (795)
379 3kke_A LACI family transcripti 49.0 1.1E+02 0.0037 25.0 16.4 34 134-169 196-233 (303)
380 3ly1_A Putative histidinol-pho 48.8 45 0.0015 28.0 7.1 53 31-85 69-122 (354)
381 2x9g_A PTR1, pteridine reducta 48.8 59 0.002 26.8 7.7 53 31-83 25-80 (288)
382 3ew7_A LMO0794 protein; Q8Y8U8 48.7 89 0.0031 24.0 11.9 50 31-84 2-51 (221)
383 1lu9_A Methylene tetrahydromet 48.6 31 0.0011 28.7 5.9 28 31-58 121-148 (287)
384 3cq5_A Histidinol-phosphate am 48.5 41 0.0014 28.7 6.9 82 31-114 93-176 (369)
385 3get_A Histidinol-phosphate am 48.3 61 0.0021 27.4 7.9 82 31-114 83-165 (365)
386 3vnd_A TSA, tryptophan synthas 48.2 24 0.00084 29.4 5.0 93 8-108 77-177 (267)
387 2z1n_A Dehydrogenase; reductas 48.2 79 0.0027 25.5 8.3 32 31-62 9-40 (260)
388 2x7x_A Sensor protein; transfe 48.2 1.2E+02 0.004 25.2 15.0 43 125-170 179-223 (325)
389 1id1_A Putative potassium chan 48.1 64 0.0022 23.6 7.1 96 32-168 5-104 (153)
390 1mx3_A CTBP1, C-terminal bindi 48.1 97 0.0033 26.7 9.1 105 31-158 169-275 (347)
391 2hmt_A YUAA protein; RCK, KTN, 48.1 39 0.0013 24.1 5.8 45 31-79 8-52 (144)
392 1gtm_A Glutamate dehydrogenase 48.0 64 0.0022 28.8 8.1 51 11-62 192-245 (419)
393 1bgv_A Glutamate dehydrogenase 47.9 54 0.0018 29.6 7.5 51 11-62 211-262 (449)
394 3p2y_A Alanine dehydrogenase/p 47.9 32 0.0011 30.3 6.0 49 31-82 185-233 (381)
395 3ruf_A WBGU; rossmann fold, UD 47.9 1.2E+02 0.0042 25.3 10.2 44 31-74 27-71 (351)
396 2pi1_A D-lactate dehydrogenase 47.6 1.1E+02 0.0036 26.3 9.2 103 31-158 142-246 (334)
397 3tl3_A Short-chain type dehydr 47.5 58 0.002 26.2 7.3 48 31-83 11-58 (257)
398 2vk2_A YTFQ, ABC transporter p 47.4 1.2E+02 0.0039 24.9 13.8 43 126-170 180-228 (306)
399 1hxh_A 3BETA/17BETA-hydroxyste 47.0 68 0.0023 25.8 7.7 68 31-101 8-77 (253)
400 1mxh_A Pteridine reductase 2; 46.9 57 0.0019 26.6 7.2 31 31-61 13-43 (276)
401 3rss_A Putative uncharacterize 46.9 66 0.0023 29.4 8.1 50 31-80 54-110 (502)
402 2nm0_A Probable 3-oxacyl-(acyl 46.8 1E+02 0.0035 24.8 8.8 63 31-102 23-85 (253)
403 4e4t_A Phosphoribosylaminoimid 46.6 39 0.0013 30.0 6.5 36 26-62 32-67 (419)
404 1yo6_A Putative carbonyl reduc 46.5 44 0.0015 26.4 6.4 32 31-62 5-38 (250)
405 2wsb_A Galactitol dehydrogenas 46.4 82 0.0028 25.0 8.1 32 31-62 13-44 (254)
406 1ek6_A UDP-galactose 4-epimera 46.4 70 0.0024 26.8 8.0 31 31-61 4-34 (348)
407 3ryc_A Tubulin alpha chain; al 46.3 56 0.0019 29.5 7.4 102 106-220 92-215 (451)
408 3nra_A Aspartate aminotransfer 46.2 88 0.003 26.7 8.7 52 32-84 104-155 (407)
409 2h7i_A Enoyl-[acyl-carrier-pro 45.6 67 0.0023 26.1 7.5 70 31-102 9-82 (269)
410 4dio_A NAD(P) transhydrogenase 45.5 44 0.0015 29.8 6.5 49 31-82 191-239 (405)
411 2bkw_A Alanine-glyoxylate amin 45.4 54 0.0018 27.8 7.1 53 31-84 60-117 (385)
412 3d3k_A Enhancer of mRNA-decapp 44.9 74 0.0025 26.3 7.5 32 31-62 87-121 (259)
413 2j6i_A Formate dehydrogenase; 44.9 97 0.0033 26.9 8.7 106 31-158 165-273 (364)
414 3jx9_A Putative phosphoheptose 44.8 30 0.001 26.8 4.7 37 25-61 74-112 (170)
415 3lkb_A Probable branched-chain 44.7 1.4E+02 0.005 25.2 10.9 36 134-170 197-232 (392)
416 4fs3_A Enoyl-[acyl-carrier-pro 44.7 45 0.0015 27.2 6.2 71 31-102 8-84 (256)
417 4e5n_A Thermostable phosphite 44.7 1.3E+02 0.0044 25.7 9.3 105 31-158 146-252 (330)
418 2pd6_A Estradiol 17-beta-dehyd 44.5 41 0.0014 27.1 5.9 32 31-62 9-40 (264)
419 3fsl_A Aromatic-amino-acid ami 44.2 71 0.0024 27.3 7.7 53 32-84 97-150 (397)
420 2rjo_A Twin-arginine transloca 43.9 1.4E+02 0.0047 24.8 15.3 44 124-169 186-231 (332)
421 3r6d_A NAD-dependent epimerase 43.8 62 0.0021 25.2 6.8 49 31-82 7-57 (221)
422 3oj0_A Glutr, glutamyl-tRNA re 43.8 37 0.0013 24.7 5.1 30 32-62 23-52 (144)
423 4fs3_A Enoyl-[acyl-carrier-pro 43.6 1.3E+02 0.0044 24.3 10.0 74 66-146 22-97 (256)
424 1e7w_A Pteridine reductase; di 43.4 71 0.0024 26.4 7.4 52 31-82 11-65 (291)
425 2d59_A Hypothetical protein PH 43.2 81 0.0028 23.2 6.9 45 34-78 82-126 (144)
426 2qhx_A Pteridine reductase 1; 43.2 68 0.0023 27.2 7.3 30 31-60 48-77 (328)
427 3f1l_A Uncharacterized oxidore 43.1 1.3E+02 0.0043 24.1 9.7 72 31-102 14-90 (252)
428 2dwc_A PH0318, 433AA long hypo 42.9 1.4E+02 0.0049 26.1 9.7 53 32-84 21-90 (433)
429 2dtx_A Glucose 1-dehydrogenase 42.9 1.3E+02 0.0045 24.3 9.4 33 31-63 10-42 (264)
430 3e3m_A Transcriptional regulat 42.9 1.5E+02 0.0051 24.9 17.3 40 127-169 243-286 (355)
431 3orq_A N5-carboxyaminoimidazol 42.9 40 0.0014 29.3 5.9 32 31-62 13-44 (377)
432 3k7y_A Aspartate aminotransfer 42.8 1.7E+02 0.0058 25.5 10.2 50 33-84 100-151 (405)
433 3f9i_A 3-oxoacyl-[acyl-carrier 42.5 65 0.0022 25.7 6.8 33 29-61 14-46 (249)
434 4h31_A Otcase, ornithine carba 42.3 59 0.002 28.4 6.7 45 39-83 192-242 (358)
435 3fr7_A Putative ketol-acid red 42.2 2.1E+02 0.0071 26.3 11.3 124 32-175 56-185 (525)
436 4ffl_A PYLC; amino acid, biosy 42.2 30 0.001 29.8 4.9 31 31-61 2-32 (363)
437 1oaa_A Sepiapterin reductase; 42.0 90 0.0031 25.0 7.7 70 31-100 8-84 (259)
438 2rir_A Dipicolinate synthase, 42.0 92 0.0032 25.9 7.9 47 31-80 158-204 (300)
439 3q2o_A Phosphoribosylaminoimid 41.9 40 0.0014 29.4 5.8 35 27-62 12-46 (389)
440 4h15_A Short chain alcohol deh 41.5 96 0.0033 25.4 7.7 65 30-103 12-77 (261)
441 2a4k_A 3-oxoacyl-[acyl carrier 41.3 1.4E+02 0.0048 24.1 9.1 68 31-101 8-77 (263)
442 4e12_A Diketoreductase; oxidor 41.2 1.5E+02 0.0051 24.4 13.5 29 32-60 6-34 (283)
443 3r3j_A Glutamate dehydrogenase 40.8 45 0.0016 30.1 5.9 53 10-62 219-271 (456)
444 3ffh_A Histidinol-phosphate am 40.6 37 0.0013 28.8 5.2 54 31-85 85-138 (363)
445 3jtm_A Formate dehydrogenase, 40.6 1.8E+02 0.0061 25.1 11.9 116 31-170 165-282 (351)
446 3h5o_A Transcriptional regulat 40.5 1.6E+02 0.0054 24.5 15.8 34 134-169 238-275 (339)
447 2vz8_A Fatty acid synthase; tr 40.3 2E+02 0.0067 32.1 11.7 58 27-84 1882-1944(2512)
448 2rgy_A Transcriptional regulat 40.3 1.5E+02 0.005 24.0 16.7 42 126-170 181-226 (290)
449 3o1i_D Periplasmic protein TOR 40.2 1.5E+02 0.005 24.0 12.7 32 134-168 193-226 (304)
450 3f4w_A Putative hexulose 6 pho 40.0 1E+02 0.0035 23.9 7.5 37 45-81 69-108 (211)
451 3t4x_A Oxidoreductase, short c 39.8 1E+02 0.0034 25.0 7.7 53 31-83 12-67 (267)
452 1y81_A Conserved hypothetical 39.8 1.1E+02 0.0037 22.4 7.6 15 69-83 86-100 (138)
453 1zk4_A R-specific alcohol dehy 39.6 84 0.0029 24.9 7.1 32 31-62 8-39 (251)
454 4hy3_A Phosphoglycerate oxidor 39.5 1.9E+02 0.0065 25.1 11.9 114 31-171 177-292 (365)
455 1gdh_A D-glycerate dehydrogena 39.5 1.7E+02 0.0059 24.7 10.4 106 31-158 147-254 (320)
456 3kjx_A Transcriptional regulat 39.3 1.7E+02 0.0057 24.4 16.0 41 126-169 239-283 (344)
457 3qiv_A Short-chain dehydrogena 39.3 1.4E+02 0.0049 23.6 8.7 73 67-145 24-96 (253)
458 3oz2_A Digeranylgeranylglycero 39.2 29 0.001 29.6 4.4 28 33-60 7-34 (397)
459 1v9l_A Glutamate dehydrogenase 39.2 60 0.002 29.0 6.4 51 11-62 191-242 (421)
460 3brq_A HTH-type transcriptiona 39.1 1.5E+02 0.0051 23.8 18.4 35 134-170 199-237 (296)
461 1kjq_A GART 2, phosphoribosylg 39.0 1.3E+02 0.0044 25.8 8.7 54 31-84 12-82 (391)
462 3ele_A Amino transferase; RER0 38.8 1.5E+02 0.0052 25.1 9.1 54 31-85 100-154 (398)
463 3gaf_A 7-alpha-hydroxysteroid 38.6 1.5E+02 0.0052 23.7 9.1 75 67-147 27-101 (256)
464 3o26_A Salutaridine reductase; 38.6 1.4E+02 0.0049 24.2 8.6 75 67-147 27-103 (311)
465 3d3w_A L-xylulose reductase; u 38.5 70 0.0024 25.3 6.4 51 31-84 9-61 (244)
466 3enk_A UDP-glucose 4-epimerase 38.4 1.7E+02 0.0058 24.2 9.5 33 30-62 6-38 (341)
467 2o20_A Catabolite control prot 38.4 1.7E+02 0.0058 24.2 17.6 33 135-169 239-275 (332)
468 1gud_A ALBP, D-allose-binding 38.4 1.6E+02 0.0053 23.8 15.4 48 118-169 178-227 (288)
469 3d8u_A PURR transcriptional re 38.3 1.5E+02 0.0051 23.5 15.3 41 126-169 173-217 (275)
470 3tb6_A Arabinose metabolism tr 38.3 1.5E+02 0.0053 23.7 15.9 32 136-169 202-237 (298)
471 2eez_A Alanine dehydrogenase; 38.3 80 0.0027 27.3 7.1 45 32-79 168-213 (369)
472 2fn9_A Ribose ABC transporter, 38.2 76 0.0026 25.7 6.7 42 125-169 182-224 (290)
473 1xgk_A Nitrogen metabolite rep 38.1 84 0.0029 26.8 7.1 52 31-83 7-59 (352)
474 1lss_A TRK system potassium up 37.9 1E+02 0.0035 21.6 7.8 46 33-81 7-53 (140)
475 4hb9_A Similarities with proba 37.8 36 0.0012 29.2 4.8 29 32-60 3-31 (412)
476 2vhw_A Alanine dehydrogenase; 37.8 78 0.0027 27.6 6.9 46 31-79 169-215 (377)
477 1cyd_A Carbonyl reductase; sho 37.8 73 0.0025 25.2 6.4 51 31-84 9-61 (244)
478 3n58_A Adenosylhomocysteinase; 37.7 1E+02 0.0036 27.8 7.7 97 24-148 242-338 (464)
479 2gqw_A Ferredoxin reductase; f 37.7 83 0.0029 27.4 7.2 33 31-63 146-178 (408)
480 3ff4_A Uncharacterized protein 37.7 75 0.0026 22.9 5.7 49 32-80 61-109 (122)
481 2yq5_A D-isomer specific 2-hyd 37.6 1.3E+02 0.0046 25.8 8.3 102 31-158 149-252 (343)
482 2gdz_A NAD+-dependent 15-hydro 37.5 92 0.0032 25.1 7.1 32 31-62 9-40 (267)
483 3m2p_A UDP-N-acetylglucosamine 37.5 89 0.0031 25.7 7.1 48 31-84 4-51 (311)
484 4dll_A 2-hydroxy-3-oxopropiona 37.4 1E+02 0.0035 26.0 7.5 44 32-78 33-76 (320)
485 2yfq_A Padgh, NAD-GDH, NAD-spe 37.3 58 0.002 29.1 6.0 52 11-63 193-245 (421)
486 1rpn_A GDP-mannose 4,6-dehydra 37.2 53 0.0018 27.4 5.7 36 28-63 13-48 (335)
487 1j32_A Aspartate aminotransfer 37.2 1.2E+02 0.0043 25.6 8.2 51 32-84 92-143 (388)
488 4egf_A L-xylulose reductase; s 37.2 1.3E+02 0.0043 24.4 7.9 74 67-147 35-110 (266)
489 3gbc_A Pyrazinamidase/nicotina 37.1 1.4E+02 0.0048 22.9 8.5 58 19-80 119-183 (186)
490 2cul_A Glucose-inhibited divis 37.0 37 0.0013 27.1 4.4 30 33-62 6-35 (232)
491 2vdc_G Glutamate synthase [NAD 36.9 1.1E+02 0.0037 27.4 7.9 52 31-82 265-322 (456)
492 1eg5_A Aminotransferase; PLP-d 36.9 64 0.0022 27.3 6.2 51 32-84 63-121 (384)
493 1spx_A Short-chain reductase f 36.6 65 0.0022 26.2 6.0 32 31-62 8-39 (278)
494 3nrc_A Enoyl-[acyl-carrier-pro 36.3 1.5E+02 0.005 24.1 8.2 84 55-146 27-114 (280)
495 3gvp_A Adenosylhomocysteinase 36.2 1.2E+02 0.004 27.3 7.7 97 24-148 215-311 (435)
496 3un1_A Probable oxidoreductase 36.1 91 0.0031 25.2 6.8 32 31-62 30-61 (260)
497 3ond_A Adenosylhomocysteinase; 36.1 1.1E+02 0.0038 27.8 7.7 46 31-79 266-311 (488)
498 2ywl_A Thioredoxin reductase r 36.0 56 0.0019 24.5 5.2 32 32-63 3-34 (180)
499 3gdg_A Probable NADP-dependent 35.8 1.7E+02 0.0057 23.4 8.4 76 67-146 37-112 (267)
500 2h78_A Hibadh, 3-hydroxyisobut 35.6 1E+02 0.0035 25.5 7.2 44 32-78 5-48 (302)
No 1
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-64 Score=460.98 Aligned_cols=284 Identities=75% Similarity=1.216 Sum_probs=263.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|.++||.++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 146 ~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv 225 (430)
T 4aec_A 146 IMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELV 225 (430)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEE
Confidence 47999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++..+++++.+.+++++++.++++|++||+||.+++.||.|++.||++|+++.||+||+|+|+|||++|++.++|+.+
T Consensus 226 ~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~ 305 (430)
T 4aec_A 226 LTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKN 305 (430)
T ss_dssp EECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhC
Confidence 99865567889999999999877899999999999988999999999999997789999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||||||.+++++..+++.++.+++|+.+..|+.++.+++|+++.|+|+|++++++.|++++||++||++|++++++
T Consensus 306 p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~~v~Vsd~ea~~a~r~La~~eGi~vepssGaa~aAa 385 (430)
T 4aec_A 306 PKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAA 385 (430)
T ss_dssp TTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCeEEEECHHHHHHHHHHHHHHCCCEEehHHHHHHHHH
Confidence 99999999999999988888888888999988888889999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhhhccccC
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTFE 284 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
+++++++..++++||+|+||+|+||+++.+|++|....+.|.|+
T Consensus 386 l~la~~~~~~g~~VV~Il~d~G~rylst~~~~~~~~~~~~~~~~ 429 (430)
T 4aec_A 386 IKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKMQPE 429 (430)
T ss_dssp HHHTTSGGGTTCEEEEEECBBGGGGTTSHHHHHHHHHC------
T ss_pred HHHHHhcCCCcCeEEEEECCCCccccchhhhhhhhhhhhcCccc
Confidence 99887654578999999999999999999999999999998886
No 2
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=5.8e-64 Score=449.68 Aligned_cols=281 Identities=62% Similarity=1.078 Sum_probs=260.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.+|.++|.++|+.++||++|+||||+|+|++|+++|++|+||||++++..|+..++.|||+|+
T Consensus 58 ~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv 137 (344)
T 3vc3_A 58 MMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELI 137 (344)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEE
Confidence 47999999999999999999999999998789999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...++.+....+.++..+.++.++++||+||.+++.||.|++.||++|+++.||+||+|+|+||+++|++.++|+.+
T Consensus 138 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~ 217 (344)
T 3vc3_A 138 LTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKN 217 (344)
T ss_dssp EECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhC
Confidence 99865445556666667777777999999999999888999999999999998889999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|+++||+|||.+++++..+++.++.+++++.+..+...+.+.+|+++.|+|+|++++++.|+++||++++|++|++++++
T Consensus 218 p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~v~v~d~eai~a~~~L~~~eGi~v~~ssga~~~aA 297 (344)
T 3vc3_A 218 PNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAA 297 (344)
T ss_dssp TTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEEEEECHHHHHHHHHHHHHHCCCEEehhHHHHHHHH
Confidence 99999999999999998888888888898888777788889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhhhcc
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESM 281 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~ 281 (285)
+++++....++++||+|+||+|+||+|+.+|++|+...+++
T Consensus 298 l~~a~~~~~~g~~VV~il~d~G~rYlst~~~~~~~~e~~~~ 338 (344)
T 3vc3_A 298 LRLAQLPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 338 (344)
T ss_dssp HHHHTSGGGTTCEEEEEECBBGGGGTTSTTTHHHHHHHHTC
T ss_pred HHHhccccCCCCEEEEEECCCchhhccchhhHHHHHHhccC
Confidence 99887655688999999999999999999999999887654
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=1.8e-63 Score=445.30 Aligned_cols=282 Identities=53% Similarity=0.902 Sum_probs=258.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++..+.++|++++|...||++|+||||+|+|++|+.+|++|+||||++++..|++.++.+||+|+
T Consensus 43 ~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 122 (334)
T 3tbh_A 43 CENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVI 122 (334)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 47999999999999999999999999888433699999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++.++++|++||+||.|++.||.|++.||++|+++.||+||+|+|+|||++|++.++|+.+
T Consensus 123 ~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~ 202 (334)
T 3tbh_A 123 LTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMG 202 (334)
T ss_dssp EECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTT
T ss_pred EECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhC
Confidence 99975457889999999998877899999999999888999999999999997789999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||||||.+++++..+++..+.+++++.+..|+.++.+++|+++.|+|+|++++++.|++++|+++||++|++++++
T Consensus 203 p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssgaa~aa~ 282 (334)
T 3tbh_A 203 SHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLIDEVLCVAGDDAIETALKLTRSDGVFCGFSGGANVYAA 282 (334)
T ss_dssp CCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCCEEEEECHHHHHHHHHHHHHHcCeEEcHHHHHHHHHH
Confidence 99999999999999888777777888999988888888999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhhhccc
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMT 282 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~ 282 (285)
+++++++..++++||+|+|++|+||+++.+|++.+.+..+++
T Consensus 283 ~~~~~~~~~~g~~Vv~v~t~~g~ky~~~~~~~~~~~~~~~~~ 324 (334)
T 3tbh_A 283 LKIAERPEMEGKTIVTVIPSFGERYLSTTLYRSVRDEVSSLP 324 (334)
T ss_dssp HHHHHSGGGTTCEEEEEECBBGGGGTTSGGGTHHHHC-----
T ss_pred HHHHHhccCCcCeEEEEECCCCccccCchhhhhhHHHhhhcc
Confidence 998876435789999999999999999999999887766554
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=4.2e-62 Score=435.00 Aligned_cols=283 Identities=83% Similarity=1.286 Sum_probs=260.4
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|.++|+.++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 38 ~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 117 (322)
T 1z7w_A 38 MMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELV 117 (322)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred ccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEE
Confidence 36999999999999999999999999888779999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++.++++|++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 197 (322)
T 1z7w_A 118 LTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQN 197 (322)
T ss_dssp EECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcC
Confidence 99974457788999999999987899999999999977899999999999997679999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||+|||.+++.+..+++.++.+++++.+..|+.++.+++|+++.|+|+|++++++.|++++|+++||++|++++++
T Consensus 198 p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~~pssga~~aaa 277 (322)
T 1z7w_A 198 ANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAA 277 (322)
T ss_dssp TTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEEEEECHHHHHHHHHHHHHHcCceEchhHHHHHHHH
Confidence 99999999999998887776666778899887778888889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhhhcccc
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAESMTF 283 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~~~~~ 283 (285)
+++.++...++++||+|+|++|.||+++.+|++|+...+.+..
T Consensus 278 ~~~~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~~~~~~~~~~~ 320 (322)
T 1z7w_A 278 IKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAMTF 320 (322)
T ss_dssp HHHHTSGGGTTCEEEEEECBBGGGGTTSGGGHHHHHHHHTCCC
T ss_pred HHHHHhcCCCCCeEEEEECCCCcccccchhhhHHHHhcccccc
Confidence 9987654346789999999999999999999999988766643
No 5
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=6.2e-61 Score=425.94 Aligned_cols=275 Identities=56% Similarity=0.977 Sum_probs=242.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|+++++ ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 39 ~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~ 117 (313)
T 2q3b_A 39 FFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELI 117 (313)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred hcCCCCcHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 36999999999999999999999988876 58999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++.+..+++++|+||.++..||.|+++||++|++++||+||+|+|+||+++|++.++|+.+
T Consensus 118 ~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 197 (313)
T 2q3b_A 118 LTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERK 197 (313)
T ss_dssp EECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhC
Confidence 99975457888999999999875558899999999966789999999999997679999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||+|||.+++.+..++...+.+++++.+..|+.+....+|+++.|+|+|++++++.|++++|+++||++|++++++
T Consensus 198 ~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~alaa~ 277 (313)
T 2q3b_A 198 PSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAA 277 (313)
T ss_dssp TTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHH
T ss_pred CCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccEEEEECHHHHHHHHHHHHHHcCceEchHHHHHHHHH
Confidence 99999999999998876555556778888877778888888999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHH
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRK 276 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~ 276 (285)
+++.++...++++||+++|++|.||+++.+|++|++
T Consensus 278 ~~~~~~~~~~~~~vv~v~~~~g~ky~~~~~~~~~~~ 313 (313)
T 2q3b_A 278 LQVARRPENAGKLIVVVLPDFGERYLSTPLFADVAD 313 (313)
T ss_dssp HHHHTCGGGTTCEEEEEECBBSGGGC----------
T ss_pred HHHHHhcCCCCCEEEEEECCCCcccccchhhhhhhC
Confidence 998775433688999999999999999999998864
No 6
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=8.9e-61 Score=425.45 Aligned_cols=274 Identities=56% Similarity=0.887 Sum_probs=244.8
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|.++|+ ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 34 ~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~ 112 (316)
T 1y7l_A 34 GRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLV 112 (316)
T ss_dssp TSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 47999999999999999999999988876 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCe-EecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
.++...+++++.+.+++++++.+++ |+++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+.
T Consensus 113 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~ 192 (316)
T 1y7l_A 113 LTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLD 192 (316)
T ss_dssp EECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHT
T ss_pred EeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHh
Confidence 9997434788999999999887666 889999999987778999999999999766999999999999999999999999
Q ss_pred C-CCcEEEEEecCCCCccCC---CC---CCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehh
Q 023227 160 N-PNIKLYGIEPTESPVLSG---GK---PGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS 232 (285)
Q Consensus 160 ~-~~~~vigv~~~~~~~~~~---~~---~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~ 232 (285)
+ |.+|||+|||++++.+.. ++ ..++.+++++.+..|+.++.+++|+++.|+|+|++++++.|++++|+++||+
T Consensus 193 ~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~eps 272 (316)
T 1y7l_A 193 FGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGIS 272 (316)
T ss_dssp SCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHH
T ss_pred CCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchhhHhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHH
Confidence 8 999999999999976542 22 2345678888777788888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHH
Q 023227 233 SGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 275 (285)
Q Consensus 233 ~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 275 (285)
+|++++++++++++...++++||+|+|++|.||+++.+|++|-
T Consensus 273 sa~~laa~~~~~~~~~~~~~~vv~i~tg~g~k~~~~~~~~~~~ 315 (316)
T 1y7l_A 273 SGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGIE 315 (316)
T ss_dssp HHHHHHHHHHHHTSGGGTTCEEEEEECBBCSSCCCTTTC----
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEECCCCcccCCcccccccc
Confidence 9999999999877643368899999999999999999999873
No 7
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=7.4e-60 Score=417.01 Aligned_cols=267 Identities=44% Similarity=0.762 Sum_probs=241.6
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|.++++ ++||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+
T Consensus 33 ~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~ 111 (303)
T 2v03_A 33 GNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELI 111 (303)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 36999999999999999999999988876 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++.+++ |++||+||.++..||.|++.||++|+++.||+||+|+|+||+++|++.++|+.+
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 190 (303)
T 2v03_A 112 LVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQS 190 (303)
T ss_dssp EECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSS
T ss_pred EECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhC
Confidence 9997556888999999998885577 999999999866799999999999997679999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|.+|||+|||.+++++.. +++++.+..|+.++++++|+++.|+|+|++++++.|++++|+++||++|++++++
T Consensus 191 p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~~pssa~alaa~ 263 (303)
T 2v03_A 191 KPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGA 263 (303)
T ss_dssp SCCEEEEEEECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHHH
Confidence 999999999999987653 5667666667778888999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhh
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEA 278 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 278 (285)
+++.++. ++++||+|+|++|.||+++.+|++|+...
T Consensus 264 ~~~~~~~--~~~~vv~i~tg~~~ky~~~~~~~~~~~~~ 299 (303)
T 2v03_A 264 LRVAAAN--PDAVVVAIICDRGDRYLSTGVFGEEHFSQ 299 (303)
T ss_dssp HHHHHHS--TTCEEEEEECBBSGGGGGGTTTCC-----
T ss_pred HHHHHHC--CCCeEEEEECCCCcccccchhcHHHHHhc
Confidence 9988765 78899999999999999999999887653
No 8
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=2.2e-60 Score=423.88 Aligned_cols=265 Identities=38% Similarity=0.632 Sum_probs=241.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|.++|+ ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 45 ~~~ptGSfK~R~a~~~l~~a~~~g~l~~~-~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 123 (325)
T 3dwg_A 45 DRNPTGSIKDRPAVRMIEQAEADGLLRPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQII 123 (325)
T ss_dssp TSSTTSBTTHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 57999999999999999999999998887 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++.++++|++||+||.++..||.|++.||++|++. ||+||+|+|+|||++|++.++|+.+
T Consensus 124 ~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~ 202 (325)
T 3dwg_A 124 FSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHV 202 (325)
T ss_dssp EECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHHHHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHS
T ss_pred EECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHHHHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhC
Confidence 999765688999999999999866999999999999668999999999999964 9999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||+|||.+++.+. .+++++.+..|+.++.+++|+++.|+|+|++++++.|++++||++||++|++++++
T Consensus 203 p~~~vigVe~~~~~~~~-------~~~~i~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epssa~a~aa~ 275 (325)
T 3dwg_A 203 ANVKIVAAEPRYGEGVY-------ALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAA 275 (325)
T ss_dssp TTCEEEEEEEECCGGGG-------CCSSGGGCCCCTTCCGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCCEEEEEeeCCCcchh-------ccCcccCCcCcccccHhhCCeEEEECHHHHHHHHHHHHHHcCceechhHHHHHHHH
Confidence 99999999999997662 34566666678888899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCE--EEEEecCCCCCCcchhhcHHH
Q 023227 241 IEIAKRPENAGKL--IVVIFPSFGERYLSSVLFESV 274 (285)
Q Consensus 241 ~~~~~~~~~~~~~--vv~i~~~gG~~~~~~~~~~~~ 274 (285)
++++++...++++ ||+|+|++|.||+++.+|++.
T Consensus 276 ~~~~~~~~~~g~~~~Vv~i~~g~g~ky~~~~~~~~~ 311 (325)
T 3dwg_A 276 LGVGAGALAAGERADIALVVADAGWKYLSTGAYAGS 311 (325)
T ss_dssp HHHHHHHHHHTCCEEEEEEECBBGGGGGGGTTTSSC
T ss_pred HHHHHHhccCCCCCeEEEEECCCCccccCchhhcCC
Confidence 9987654234566 999999999999999777654
No 9
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=5.1e-60 Score=424.52 Aligned_cols=274 Identities=43% Similarity=0.784 Sum_probs=250.7
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++..+.++|.++++ ++||++|+||||+|+|++|+.+|++|+||||++++..|+++++.+||+|+
T Consensus 50 ~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 128 (343)
T 2pqm_A 50 YFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELI 128 (343)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 36999999999999999999999988876 58999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCe-EecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNA-YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
.++...+++++.+.+++++++.+.. ++++||+||.+++.||.+++ ||++|+++.||+||+|+|+||+++|++.++|+.
T Consensus 129 ~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~ 207 (343)
T 2pqm_A 129 LTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEK 207 (343)
T ss_dssp EECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHc
Confidence 9997445788899999999887655 77899999998778999999 999999767999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHH
Q 023227 160 NPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAA 239 (285)
Q Consensus 160 ~~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa 239 (285)
+|++|||+|||.+++.+..++..++.+++++.+..|+.++..++|+++.|+|+|++++++.|++++|+++||++|+++++
T Consensus 208 ~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epssa~alaa 287 (343)
T 2pqm_A 208 KKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA 287 (343)
T ss_dssp CTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHHHHHhCCeEEEECHHHHHHHHHHHHHHhCCeEchhHHHHHHH
Confidence 99999999999999888766666677889987777888888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHH
Q 023227 240 AIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRK 276 (285)
Q Consensus 240 ~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~ 276 (285)
++++++++..++++||+|+|++|.||+++.+|++|..
T Consensus 288 ~~~~~~~~~~~~~~vv~i~tg~g~ky~~~~~~~~~~~ 324 (343)
T 2pqm_A 288 GLKEAEKPENEGKTIVIIVPSCGERYLSTDLYKIKDE 324 (343)
T ss_dssp HHHHHTSGGGTTCEEEEEECBBGGGGTTSSTTTSCCC
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCccccchhhhhhHhh
Confidence 9998776423688999999999999999999988753
No 10
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=3.4e-59 Score=413.15 Aligned_cols=269 Identities=52% Similarity=0.871 Sum_probs=245.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCe--EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGES--VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 78 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~--~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~ 78 (285)
++|||||||+|++.+++.++.++|.++|+ + +||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+
T Consensus 32 ~~~ptGSfK~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~ 110 (304)
T 1ve1_A 32 GLNPGGSIKDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAE 110 (304)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCE
T ss_pred ccCCCCcHHHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCE
Confidence 36999999999999999999999988776 5 89999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHh
Q 023227 79 LVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKE 158 (285)
Q Consensus 79 v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~ 158 (285)
|+.++...+++++.+.+++++++ +++++++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+
T Consensus 111 V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~ 189 (304)
T 1ve1_A 111 LVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKE 189 (304)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHT
T ss_pred EEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHH
Confidence 99999754488899999999888 47899999999998544589999999999976799999999999999999999999
Q ss_pred hCCCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHH
Q 023227 159 KNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAA 238 (285)
Q Consensus 159 ~~~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~a 238 (285)
.+|++|||+|||.+++.+..+++..+.+++++.+..|+.++.+++|+++.|+|+|++++++.|++++|+++||++|++++
T Consensus 190 ~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~a~a 269 (304)
T 1ve1_A 190 RIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVW 269 (304)
T ss_dssp TCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHH
T ss_pred hCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEECHHHHHHHHHHHHHHhCcEEcHHHHHHHH
Confidence 99999999999999988876666667778888877788888889999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcH
Q 023227 239 AAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFE 272 (285)
Q Consensus 239 a~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~ 272 (285)
++++++++. .++++||+|+|++|.||+++.+|+
T Consensus 270 a~~~~~~~~-~~~~~vv~i~tg~g~ky~~~~~~~ 302 (304)
T 1ve1_A 270 AALQVAREL-GPGKRVACISPDGGWKYLSTPLYA 302 (304)
T ss_dssp HHHHHHHHH-CTTCEEEEEECBBSGGGTTSTTTC
T ss_pred HHHHHHHhc-CCCCeEEEEECCCCccCCCcccCC
Confidence 999987653 367899999999999999986665
No 11
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.3e-59 Score=416.50 Aligned_cols=269 Identities=58% Similarity=0.937 Sum_probs=215.7
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|+++++ ++||++|+||||+|+|++|+.+|++|+||||++++..|++.++.+||+|+
T Consensus 37 ~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~ 115 (308)
T 2egu_A 37 FMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELV 115 (308)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEE
T ss_pred ccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 36999999999999999999999988876 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++...+++++.+.+++++++. ++++++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+
T Consensus 116 ~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 194 (308)
T 2egu_A 116 LTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAY 194 (308)
T ss_dssp EECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhC
Confidence 9997445788889999998887 458899999999867899999999999997679999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHH
Q 023227 161 PNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAA 240 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~ 240 (285)
|++|||+|||.+++.+..++...+.+++++.+..|+.+...++|+++.|+|+|++++++.|++++||++||++|++++++
T Consensus 195 ~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~epssa~a~aa~ 274 (308)
T 2egu_A 195 PNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVITVTTEEAFAAARRAAREEGILGGISSGAAIHAA 274 (308)
T ss_dssp TTCEEEEEEECC-----------------------CCCCCCSCSEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEEEECHHHHHHHHHHHHHHhCceEcHHHHHHHHHH
Confidence 99999999999998777655556677888877667778888999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEEecCCCCCCcchhhcH
Q 023227 241 IEIAKRPENAGKLIVVIFPSFGERYLSSVLFE 272 (285)
Q Consensus 241 ~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~ 272 (285)
+++++++ .++++||+|+|++|.||+++.+|+
T Consensus 275 ~~~~~~~-~~~~~vv~i~tg~g~ky~~~~~~~ 305 (308)
T 2egu_A 275 LKVAKEL-GKGKKVLAIIPSNGERYLSTPLYQ 305 (308)
T ss_dssp HHHHHHH-CTTCEEEEEECBBGGGGTTSSTTC
T ss_pred HHHHHhc-CCCCeEEEEECCCCcccccchhcc
Confidence 9987764 478899999999999999987774
No 12
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=1.1e-57 Score=418.60 Aligned_cols=276 Identities=39% Similarity=0.634 Sum_probs=244.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|.++|+ ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 133 ~~nptGSfKdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~AlA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv 211 (435)
T 1jbq_A 133 FFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIV 211 (435)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 57999999999999999999999998887 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHH---HHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHH
Q 023227 81 LTDPAKGMKG---AVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLK 157 (285)
Q Consensus 81 ~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k 157 (285)
.++...++++ ..+.+++++++.++.|+++||+|+.|+..||.+++.||++|+++.+|+||+|+|+|||++|++.++|
T Consensus 212 ~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk 291 (435)
T 1jbq_A 212 RTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLK 291 (435)
T ss_dssp ECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred EecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHH
Confidence 9986434443 4577888888877789999999998888999999999999997679999999999999999999999
Q ss_pred hhCCCcEEEEEecCCCCccC-----CCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehh
Q 023227 158 EKNPNIKLYGIEPTESPVLS-----GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS 232 (285)
Q Consensus 158 ~~~~~~~vigv~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~ 232 (285)
+..|++|||||||.+++.+. .+....+.+++++.+.+|..++.+++|+++.|+|+|++++++.|++++||++||+
T Consensus 292 ~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~s 371 (435)
T 1jbq_A 292 EKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGS 371 (435)
T ss_dssp HHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHH
T ss_pred HhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccchhhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHH
Confidence 99999999999999996542 1233345577888776676677888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhh
Q 023227 233 SGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEA 278 (285)
Q Consensus 233 ~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 278 (285)
+|++++++++++++. .++++||+|+|++|.||+++.++++|+...
T Consensus 372 sgaalaaa~~~~~~~-~~g~~VV~iltd~g~ky~~~~~~~~w~~~~ 416 (435)
T 1jbq_A 372 AGSTVAVAVKAAQEL-QEGQRCVVILPDSVRNYMTKFLSDRWMLQK 416 (435)
T ss_dssp HHHHHHHHHHHGGGC-CTTCEEEEEECBBGGGGTTTTTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHc-CCCCeEEEEEcCCcccccchhhccHHHHhc
Confidence 999999999988763 368899999999999999999999998764
No 13
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=4e-58 Score=405.96 Aligned_cols=263 Identities=53% Similarity=0.799 Sum_probs=240.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|.+++ +||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+
T Consensus 39 ~~~ptGSfK~R~a~~~l~~a~~~g~~~~---~vv~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 115 (303)
T 1o58_A 39 KNNPGGSVKDRPALFMILDAEKRGLLKN---GIVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELV 115 (303)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTCCTT---CEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHcCCCCC---CEEEECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 3699999999999999999999887654 3999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++..+++++.+.+++++++. ++++++||+||.++..||.|+++||++|+++.||+||+|+|+||+++|++.++|+.+
T Consensus 116 ~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 194 (303)
T 1o58_A 116 LTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFF 194 (303)
T ss_dssp EECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhC
Confidence 9997434888889999998887 688899999999877799999999999997669999999999999999999999999
Q ss_pred CC-cEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHH
Q 023227 161 PN-IKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAA 239 (285)
Q Consensus 161 ~~-~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa 239 (285)
|+ +|||+|||.+++++..+++..+.+++++.+..|+.++.+++|+++.|+|+|++++++.|++++|+++||++|+++++
T Consensus 195 p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epssa~alaa 274 (303)
T 1o58_A 195 GNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEVITVEDEEAYEMARYLAKKEGLLVGISSGANVAA 274 (303)
T ss_dssp GGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCceEcHHHHHHHHH
Confidence 99 99999999999888877766777888887777888888899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 240 AIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 240 ~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
++++.++. .++++||+|+|++|.||+++
T Consensus 275 ~~~~~~~~-~~~~~vv~i~tg~g~ky~~~ 302 (303)
T 1o58_A 275 ALKVAQKL-GPDARVVTVAPDHAERYLSI 302 (303)
T ss_dssp HHHHHHTS-CTTCCEEEEECBBGGGCTTT
T ss_pred HHHHHHHc-CCCCEEEEEECCCCcccccC
Confidence 99988763 36789999999999999986
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=2.3e-56 Score=422.18 Aligned_cols=275 Identities=37% Similarity=0.618 Sum_probs=249.6
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.+|.++|.++|| ++||++|+||||+|+|++|+.+|++|+||||++++..|+..++.+||+|+
T Consensus 85 ~~~ptGS~K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~ 163 (527)
T 3pc3_A 85 FLNPGGSVKDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKII 163 (527)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEE
Confidence 47999999999999999999999999887 68999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChH---HHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHH
Q 023227 81 LTDPAKGMK---GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLK 157 (285)
Q Consensus 81 ~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k 157 (285)
.++...+|+ .+.+.+++++++.++.++++||+||.|++.||.+++.||++|+++.||+||+|+|+|||++|++.++|
T Consensus 164 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k 243 (527)
T 3pc3_A 164 RTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIK 243 (527)
T ss_dssp EECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHH
T ss_pred EeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHH
Confidence 998643443 36778889998887889999999998889999999999999997789999999999999999999999
Q ss_pred hhCCCcEEEEEecCCCCccC-----CCCCCCccccccCCCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehh
Q 023227 158 EKNPNIKLYGIEPTESPVLS-----GGKPGPHKIQGIGAGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGIS 232 (285)
Q Consensus 158 ~~~~~~~vigv~~~~~~~~~-----~~~~~~~~~~gl~~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~ 232 (285)
+..|++|||||||.+++.+. .+....+.+++++.+.+|..++.+++|+++.|+|+|++++++.|++++||++||+
T Consensus 244 ~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p~~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~ps 323 (527)
T 3pc3_A 244 EQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPTVFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGS 323 (527)
T ss_dssp HHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCCTTCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHH
T ss_pred HhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCCcccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHH
Confidence 99999999999999997543 2233455678999888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHh
Q 023227 233 SGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKE 277 (285)
Q Consensus 233 ~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~ 277 (285)
+|++++++++++++. .++++||+|++++|.+|+++.++++|+..
T Consensus 324 sa~alaaal~~~~~~-~~~~~vv~i~~d~g~ryls~~~~~~~l~~ 367 (527)
T 3pc3_A 324 SGGAMHAALEHARKL-KKGQRCVVILPDGIRNYMTKFVSDNWMEA 367 (527)
T ss_dssp HHHHHHHHHHHHTTC-CTTCEEEEEECBBGGGGTTTTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCCCeEEEEEcCcchhhHhhhhcHHHHHh
Confidence 999999999988753 47889999999999999999999888654
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=7.6e-55 Score=391.19 Aligned_cols=261 Identities=21% Similarity=0.308 Sum_probs=221.8
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|...+. ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 48 ~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 126 (346)
T 3l6b_A 48 LFQKTGSFKIRGALNAVRSLVPDALERKP-KAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIV 126 (346)
T ss_dssp GGSGGGBTHHHHHHHHHHTTC-----CCC-SCEEEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhccccCC-CEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 47999999999999999999887643332 57999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++ +++++.+.+++++++. +++|++|++||.+ +.||.|+++||++|+ +.||+||+|+|+|||++|++.++|+.+
T Consensus 127 ~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~ 201 (346)
T 3l6b_A 127 YCEP--SDESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGTIALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALK 201 (346)
T ss_dssp EECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHHHHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EECC--CHHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhC
Confidence 9986 5788899999998887 7899999999987 899999999999999 579999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccC----CCCC------CCccccccCCCC--CccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCe
Q 023227 161 PNIKLYGIEPTESPVLS----GGKP------GPHKIQGIGAGF--VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~----~~~~------~~~~~~gl~~~~--~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~ 228 (285)
|++|||||||.+++++. .+++ ..+.++++.... ..+.+..+++|+++.|+|+|+.++++.|++++|++
T Consensus 202 p~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~ 281 (346)
T 3l6b_A 202 PSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLL 281 (346)
T ss_dssp TTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCCTTHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCcHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcE
Confidence 99999999999987542 2332 123445554221 22334577899999999999999999999999999
Q ss_pred eehhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcch
Q 023227 229 VGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 229 ~~p~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~ 268 (285)
+||++|++++++++...+.. .++++||+|+ |||++|+++
T Consensus 282 ~epssa~alaa~~~~~~~~~~~~~~~Vv~i~-sGG~~d~~~ 321 (346)
T 3l6b_A 282 IEPTAGVGVAAVLSQHFQTVSPEVKNICIVL-SGGNVDLTS 321 (346)
T ss_dssp CCHHHHHHHHHHHSGGGGGSCTTCCEEEEEE-CBCCCCTTG
T ss_pred EcHHHHHHHHHHHHhhhhhccCCCCeEEEEc-CCCCCCHHH
Confidence 99999999999987553322 4678888888 799999987
No 16
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=5.8e-53 Score=381.22 Aligned_cols=267 Identities=19% Similarity=0.175 Sum_probs=228.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+
T Consensus 69 ~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv 143 (364)
T 4h27_A 69 SAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVK 143 (364)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEE
Confidence 4799999999999999999999887 78999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++ +++++.+.+++++++.++++|++||+||.+ +.||.+++.||++|+++.||+||+|+|+|||++|++.++|+.+
T Consensus 144 ~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~ 220 (364)
T 4h27_A 144 VVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVG 220 (364)
T ss_dssp EECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTT
T ss_pred EECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhC
Confidence 9986 578899999999999778999999999988 8899999999999997679999999999999999999999986
Q ss_pred -CCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCCc---cCcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 161 -PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GVLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 161 -~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
|+++||+|||++++++. .+++ ..+.+++|+.+..+ +.+..++.+..+.|+|+|++++++.|++++||
T Consensus 221 ~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi 300 (364)
T 4h27_A 221 WGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKI 300 (364)
T ss_dssp CTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCC
Confidence 88999999999998663 2332 23445677665432 23345667788899999999999999999999
Q ss_pred eeehhHHHHHHHHH-----HHHhcCCCC--CCEEEEEecCCC-CCCcchhhcHHHHHhh
Q 023227 228 FVGISSGGAAAAAI-----EIAKRPENA--GKLIVVIFPSFG-ERYLSSVLFESVRKEA 278 (285)
Q Consensus 228 ~~~p~~g~a~aa~~-----~~~~~~~~~--~~~vv~i~~~gG-~~~~~~~~~~~~~~~~ 278 (285)
++||++|+++++++ ++.+++..+ +++||+|+ ||| +.+++ .+.+|....
T Consensus 301 ~~eps~aaalaa~~~~k~~~l~~~g~~~~~~~~Vv~v~-tGG~~~d~~--~l~~~~~~~ 356 (364)
T 4h27_A 301 LVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIV-CGGSNISLA--QLRALKEQL 356 (364)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCCEEEEEE-CBCSSCCHH--HHHHHHHHT
T ss_pred eEcccHHHHHHHHHhhhhHHhhhccCcCCCCCeEEEEE-CCCCCCCHH--HHHHHHHHh
Confidence 99999999999985 566666533 58999999 666 45555 466665543
No 17
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=2.3e-54 Score=387.71 Aligned_cols=262 Identities=20% Similarity=0.257 Sum_probs=226.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
++|||||||||++.+++.++.+ .+. ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|
T Consensus 63 ~~~ptGSfKdR~a~~~i~~a~~~~~~-----~~vv~~ssGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V 137 (342)
T 2gn0_A 63 NMQRTGSFKIRGAFNKLSSLTEAEKR-----KGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEV 137 (342)
T ss_dssp GGSGGGBTHHHHHHHHHHHSCHHHHH-----TCEEEECSSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEE
T ss_pred cCCCcCChHHHHHHHHHHHHHHhcCC-----CEEEEECCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEE
Confidence 4799999999999999998763 332 5799999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 80 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
+.+++ +++++.+.+++++++. +++|++||+||.+ +.||.|+++||++|++ .||+||+|+|+|||++|++.++|+.
T Consensus 138 ~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~ 212 (342)
T 2gn0_A 138 VLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDPKV-IAGQGTIGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSI 212 (342)
T ss_dssp EECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHHH-HHHHHHHHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHh
Confidence 99986 5888899999998885 7899999999987 7899999999999995 6999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCccC----CCCC-----CCccccccCCCC---CccCcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 160 NPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGF---VPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 160 ~~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~---~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
+|++|||+|||.+++++. .+++ ..+.+++++.+. .++.++.+++|+++.|+|+|++++++.|++++|+
T Consensus 213 ~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi 292 (342)
T 2gn0_A 213 NPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKV 292 (342)
T ss_dssp CTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCB
T ss_pred CCCCeEEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCccHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCe
Confidence 999999999999987653 2332 245567777542 2445667889999999999999999999999999
Q ss_pred eeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHH
Q 023227 228 FVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 275 (285)
Q Consensus 228 ~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 275 (285)
++||++|+++++++++.+++..++++||+|+ +||+.+++ .|.+++
T Consensus 293 ~~epssa~alaa~~~~~~~~~~~~~~Vv~i~-tGg~~d~~--~~~~~~ 337 (342)
T 2gn0_A 293 ITEGAGALACAALLSGKLDSHIQNRKTVSII-SGGNIDLS--RVSQIT 337 (342)
T ss_dssp CCCTGGGHHHHHHHHTTTHHHHTTSEEEEEE-CBCCCCHH--HHHHHH
T ss_pred EEcHHHHHHHHHHHHhhhhccCCCCEEEEEE-CCCCCCHH--HHHHHH
Confidence 9999999999999987542123688999999 77886655 355544
No 18
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=7.6e-53 Score=381.32 Aligned_cols=267 Identities=18% Similarity=0.165 Sum_probs=227.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 69 ~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 143 (372)
T 1p5j_A 69 SAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCK 143 (372)
T ss_dssp GGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEE
Confidence 3699999999999999999988775 78999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++ +++++.+.+++++++.++++|++||+||.+ +.||.|++.||++|++..||+||+|+|+|||++|++.++|+.+
T Consensus 144 ~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 220 (372)
T 1p5j_A 144 VVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECG 220 (372)
T ss_dssp ECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTT
T ss_pred EECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhC
Confidence 9986 688899999999988668999999999988 7899999999999997669999999999999999999999986
Q ss_pred -CCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCCc---cCcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 161 -PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVP---GVLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 161 -~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~---~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
|++|||+|||.+++++. .+++ ..+.+++|+.+..+ +.+...+.+.++.|+|+|++++++.|++++||
T Consensus 221 ~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi 300 (372)
T 1p5j_A 221 WGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGSQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKI 300 (372)
T ss_dssp CTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCC
T ss_pred CCCceEEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCHHHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCC
Confidence 89999999999987653 2322 13455677765443 23345667889999999999999999999999
Q ss_pred eeehhHHHHHHHHHH-----HHhcCC--CCCCEEEEEecCCCCCCcchhhcHHHHHh
Q 023227 228 FVGISSGGAAAAAIE-----IAKRPE--NAGKLIVVIFPSFGERYLSSVLFESVRKE 277 (285)
Q Consensus 228 ~~~p~~g~a~aa~~~-----~~~~~~--~~~~~vv~i~~~gG~~~~~~~~~~~~~~~ 277 (285)
++||++|++++++++ +.+++. .++++||+|+|+|++ +|...+++|+..
T Consensus 301 ~~epssa~alaa~~~~~~~~l~~~g~~~~~~~~Vv~i~tgg~~--~~~~~~~~~~~~ 355 (372)
T 1p5j_A 301 LVEPACGAALAAVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSN--ISLAQLRALKEQ 355 (372)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHTTSSCSSCSCEEEECCBCSS--CCHHHHHHHHHH
T ss_pred eechhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCC--CCHHHHHHHHHH
Confidence 999999999999874 333342 367899999954443 555567877655
No 19
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=5.6e-53 Score=380.26 Aligned_cols=259 Identities=19% Similarity=0.209 Sum_probs=226.6
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAEL 79 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~Ga~v 79 (285)
++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++ ++..|+++++.+||+|
T Consensus 53 ~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V 127 (351)
T 3aey_A 53 GLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARI 127 (351)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEE
T ss_pred CCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEE
Confidence 4799999999999999999998887 789999999999999999999999999999998 9999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 80 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
+.+++ +++++.+.+++++++. +++|+++ +||.+ +.||.|++.||++|++..||+||+|+|+|||++|++.++|+.
T Consensus 128 ~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~ 202 (351)
T 3aey_A 128 VQVEG--NFDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLAFEVVDELGDAPHYHALPVGNAGNITAHWMGYKAY 202 (351)
T ss_dssp EEEES--CHHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEECC--CHHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHHHHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHH
Confidence 99997 5888889999999887 5888887 78887 789999999999999766999999999999999999999987
Q ss_pred CC------CcEEEEEecCCCCccCCCCCC---CccccccCCCCCc-cC----cccccCCeEEEeCHHHHHHHHHHHHHhc
Q 023227 160 NP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV----LEVNIIDEVVQVSSDEAIETAKLLALKE 225 (285)
Q Consensus 160 ~~------~~~vigv~~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~d~~~~v~d~e~~~a~~~l~~~~ 225 (285)
+| .+||++|||.+++++..+++. .+.+++++.+..+ +. +.+++.|+++.|+|+|++++++.|++++
T Consensus 203 ~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~ 282 (351)
T 3aey_A 203 HALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPASWQGAVRAKEESGGVIEAVTDEEILFAYRYLAREE 282 (351)
T ss_dssp HHHTSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHT
T ss_pred HhccccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCCHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhC
Confidence 54 689999999999776544432 2455777655421 11 2356788999999999999999999999
Q ss_pred CCeeehhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcchh
Q 023227 226 GLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 269 (285)
Q Consensus 226 gi~~~p~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 269 (285)
|+++||+||+++++++++.+++. .++++||+|+|++|.||+++.
T Consensus 283 gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 327 (351)
T 3aey_A 283 GIFCEPASAAAMAGVFKLLREGRLEPESTVVLTLTGHGLKDPATA 327 (351)
T ss_dssp CCCBCHHHHHHHHHHHHHHHTTCSCTTCEEEEEECBBGGGCHHHH
T ss_pred CEEECchHHHHHHHHHHHHHhcCCCCCCeEEEEECCCCCCCHHHH
Confidence 99999999999999999987654 478899999977888998863
No 20
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=8e-53 Score=379.36 Aligned_cols=259 Identities=20% Similarity=0.203 Sum_probs=226.7
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAEL 79 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~Ga~v 79 (285)
++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++ ++..|++.++.+||+|
T Consensus 55 ~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v 129 (352)
T 2zsj_A 55 GLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKV 129 (352)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEE
T ss_pred CCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEE
Confidence 4699999999999999999998887 789999999999999999999999999999998 9999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 80 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
+.+++ +++++.+.+++++++. +++|+++ +||.+ +.||.+++.||++|++..||+||+|+|+|||++|++.++|+.
T Consensus 130 ~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~ 204 (352)
T 2zsj_A 130 LAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAAFEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIY 204 (352)
T ss_dssp EEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHHHHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHH
Confidence 99997 5888889999999887 5888887 88888 789999999999999766999999999999999999999987
Q ss_pred CC------CcEEEEEecCCCCccCCCCCC---CccccccCCCCCc-cC----cccccCCeEEEeCHHHHHHHHHHHHHhc
Q 023227 160 NP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVP-GV----LEVNIIDEVVQVSSDEAIETAKLLALKE 225 (285)
Q Consensus 160 ~~------~~~vigv~~~~~~~~~~~~~~---~~~~~gl~~~~~~-~~----~~~~~~d~~~~v~d~e~~~a~~~l~~~~ 225 (285)
.| .+|||+|||.+++++..+++. .+.+++++.+..+ +. +.+++.|+++.|+|+|++++++.|++++
T Consensus 205 ~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~ 284 (352)
T 2zsj_A 205 YEEGKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTE 284 (352)
T ss_dssp HHTTSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhC
Confidence 54 689999999999876544432 2445777655421 11 2356778999999999999999999999
Q ss_pred CCeeehhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcchh
Q 023227 226 GLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 269 (285)
Q Consensus 226 gi~~~p~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 269 (285)
|+++||+||+++++++++++++. .++++||+|+|++|.||+++.
T Consensus 285 gi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 329 (352)
T 2zsj_A 285 GVFCEPASAASVAGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTA 329 (352)
T ss_dssp CCCBCHHHHHHHHHHHHHHHTTCCCSCCEEEEEECBBGGGCHHHH
T ss_pred CeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCccChHHH
Confidence 99999999999999999987654 468899999977888999863
No 21
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-52 Score=371.53 Aligned_cols=265 Identities=22% Similarity=0.190 Sum_probs=224.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 30 ~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~ 104 (318)
T 2rkb_A 30 NVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQ 104 (318)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEE
Confidence 3699999999999999999998875 78999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++ +++++.+.+++++++. +++|++|++||.+ +.||.+++.||++|++..||+||+|+|+||+++|++.++|+.+
T Consensus 105 ~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 180 (318)
T 2rkb_A 105 LTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVG 180 (318)
T ss_dssp ECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHT
T ss_pred EECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhC
Confidence 9986 6888999999998875 8999999999988 7899999999999997679999999999999999999999985
Q ss_pred -CCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCCcc---CcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 161 -PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVPG---VLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 161 -~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~~---~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
|++|||+|||.+++++. .+++ ..+.+++++.+..+. .+...+.++++.|+|+|++++++.|++++|+
T Consensus 181 ~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi 260 (318)
T 2rkb_A 181 WQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLDDERM 260 (318)
T ss_dssp CTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHHHSCEEEEEECHHHHHHHHHHHHHHHCB
T ss_pred CCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHhcCc
Confidence 88999999999987653 2322 134556777654432 2335567889999999999999999999999
Q ss_pred eeehhHHHHHHHHHH-----HHhcCC--CCCCEEEEEecCCCCCCcchhhcHHHHH
Q 023227 228 FVGISSGGAAAAAIE-----IAKRPE--NAGKLIVVIFPSFGERYLSSVLFESVRK 276 (285)
Q Consensus 228 ~~~p~~g~a~aa~~~-----~~~~~~--~~~~~vv~i~~~gG~~~~~~~~~~~~~~ 276 (285)
++||++|++++++++ +.+++. .++++||+|+|+|++.+++ .+.+|..
T Consensus 261 ~~eps~a~a~aa~~~~~~~~~~~~g~~~~~~~~vv~i~tgg~~~~~~--~l~~~~~ 314 (318)
T 2rkb_A 261 LVEPACGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSR--ELQALKT 314 (318)
T ss_dssp CCCHHHHHHHHHHHTSHHHHHHHTTSSCSSCSCEEEEECBCSSCCHH--HHHHHHH
T ss_pred EEchhHHHHHHHHHHhhHHHHhhccccCCCCCeEEEEECCCCCCCHH--HHHHHHH
Confidence 999999999999873 323342 3678999999555446665 3555543
No 22
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-53 Score=379.71 Aligned_cols=259 Identities=21% Similarity=0.246 Sum_probs=226.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAEL 79 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~Ga~v 79 (285)
++|||||||||++.+++.++.++|. ++||++|+||||+|+|++|+++|++|+||||++ ++..|+++++.+||+|
T Consensus 61 ~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v 135 (360)
T 2d1f_A 61 GLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKI 135 (360)
T ss_dssp GGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEE
T ss_pred CCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEE
Confidence 3699999999999999999998887 789999999999999999999999999999998 9999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 80 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
+.+++ +++++.+.+++++++.++.+++++ +||.+ +.||.+++.||++|++..||+||+|+|+||+++|++.++|+.
T Consensus 136 ~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~ 211 (360)
T 2d1f_A 136 IQIDG--NFDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYWKGYTEY 211 (360)
T ss_dssp EEBSS--CHHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHHHHH
Confidence 99997 588899999999988755888888 78887 789999999999999767999999999999999999999987
Q ss_pred CC------CcEEEEEecCCCCccCCCCCC---CccccccCCCCCccC------cccccCCeEEEeCHHHHHHHHHHHHHh
Q 023227 160 NP------NIKLYGIEPTESPVLSGGKPG---PHKIQGIGAGFVPGV------LEVNIIDEVVQVSSDEAIETAKLLALK 224 (285)
Q Consensus 160 ~~------~~~vigv~~~~~~~~~~~~~~---~~~~~gl~~~~~~~~------~~~~~~d~~~~v~d~e~~~a~~~l~~~ 224 (285)
.+ .+||++|||.+++++..+++. .+.+++|+.+. |.. +.+++.|+++.|+|+|++++++.|+++
T Consensus 212 ~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~-~~~~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~ 290 (360)
T 2d1f_A 212 HQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGS-PASWTSAVEAQQQSKGRFLAASDEEILAAYHLVARV 290 (360)
T ss_dssp HHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSS-CTTHHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHH
T ss_pred HhccccccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCC-CCcHHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHh
Confidence 54 689999999999877544432 23457776554 222 235677899999999999999999999
Q ss_pred cCCeeehhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcchh
Q 023227 225 EGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 269 (285)
Q Consensus 225 ~gi~~~p~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 269 (285)
+|+++||+||+++++++++.+++. .++++||+|+|++|.||+++.
T Consensus 291 eGi~~epssa~alaa~~~~~~~~~~~~~~~vv~i~tg~~~k~~~~~ 336 (360)
T 2d1f_A 291 EGVFVEPASAASIAGLLKAIDDGWVARGSTVVCTVTGNGLKDPDTA 336 (360)
T ss_dssp HCCCBCHHHHHHHHHHHHHHHHTSSCTTCEEEEEECBBGGGCHHHH
T ss_pred cCeeECchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcCCHHHH
Confidence 999999999999999999887654 478899999977888998863
No 23
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=5.8e-53 Score=381.83 Aligned_cols=266 Identities=24% Similarity=0.275 Sum_probs=230.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++..+.+++. .++||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+
T Consensus 83 ~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~ 158 (366)
T 3iau_A 83 DKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVV 158 (366)
T ss_dssp GGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHTTCEEE
T ss_pred CCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHHHhCCceEEEeCCCCCHHHHHHHHHCCCeEE
Confidence 4799999999999999987643322 257999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.+++ +++++.+.+++++++. +++|++||+||.+ +.||.|++.||++|+ +.||+||+|+|+||+++|++.++|+.+
T Consensus 159 ~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~ 233 (366)
T 3iau_A 159 LYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEINRQL-KDIHAVFIPVGGGGLIAGVATFFKQIA 233 (366)
T ss_dssp ECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHHHHC-CSEEEEEEECSSSHHHHHHHHHHHHHS
T ss_pred EECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHHHhc-CCCCEEEEccCchHHHHHHHHHHHHhC
Confidence 9985 6889999999998886 7899999999988 799999999999999 679999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCC---ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCe
Q 023227 161 PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~ 228 (285)
|++|+++|+|.+++++. .++. ..+..++++.+.. ++.+..+++|+++.|+|+|++++++.|++++|++
T Consensus 234 ~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~ 313 (366)
T 3iau_A 234 PNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAKCQELIDGMVLVANDGISAAIKDVYDEGRNI 313 (366)
T ss_dssp TTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHHHHHhcCCCceeECHHHHHHHHHHHHHHcCcE
Confidence 99999999999998664 2332 1234566665432 3455678899999999999999999999999999
Q ss_pred eehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhh
Q 023227 229 VGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEA 278 (285)
Q Consensus 229 ~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~ 278 (285)
+||+||+++++++++++++..++++||+|+ |||+.+++ .+.+++..+
T Consensus 314 ~ep~sa~alaa~~~~~~~~~~~g~~Vv~i~-tGgn~d~~--~l~~~~~~~ 360 (366)
T 3iau_A 314 LETSGAVAIAGAAAYCEFYKIKNENIVAIA-SGANMDFS--KLHKVTELA 360 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCSCEEEEEE-CBCCCCGG--GHHHHHHHH
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCeEEEEe-CCCCCCHH--HHHHHHHhh
Confidence 999999999999999887665789999999 78886555 477766554
No 24
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=4.5e-53 Score=375.12 Aligned_cols=252 Identities=23% Similarity=0.300 Sum_probs=217.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||||++.+++..+. +. ++||++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+
T Consensus 43 ~~~ptgSfKdR~a~~~i~~l~--~~-----~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 115 (311)
T 1ve5_A 43 HLQKTGSFKARGALSKALALE--NP-----KGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVV 115 (311)
T ss_dssp GGSGGGBTHHHHHHHHHHHSS--SC-----CCEEEECSSHHHHHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEE
T ss_pred CCCCcCCcHHHHHHHHHHHhc--CC-----CeEEEECCCcHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 369999999999999999876 22 57999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhC---CCCCEEEEccCCcccHHHHHHHHH
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFLK 157 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~---~~~d~iv~~vG~Gg~~aGi~~~~k 157 (285)
.+++ .++++.+.+++++++. +++|++||+||.+ +.||.++++||++|++ +.||+||+|+|+|||++|++.++|
T Consensus 116 ~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k 191 (311)
T 1ve5_A 116 DRGV--TAKNREEVARALQEET-GYALIHPFDDPLV-IAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVK 191 (311)
T ss_dssp CTTC--CTTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHH
T ss_pred EECC--CHHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHH
Confidence 9986 4678888889988886 7899999999988 7899999999999995 579999999999999999999999
Q ss_pred hhCCCcEEEEEecCCCCccC----CCCC------CCccccccCCCC---CccCcccccCCeEEEeCHHHHHHHHHHHHHh
Q 023227 158 EKNPNIKLYGIEPTESPVLS----GGKP------GPHKIQGIGAGF---VPGVLEVNIIDEVVQVSSDEAIETAKLLALK 224 (285)
Q Consensus 158 ~~~~~~~vigv~~~~~~~~~----~~~~------~~~~~~gl~~~~---~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~ 224 (285)
+.+|++|||+|||.+++++. .+++ ..+.+++++.+. .++.+..+++|+++.|+|+|++++++.|+++
T Consensus 192 ~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~ 271 (311)
T 1ve5_A 192 ALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRTLSLGERTFPILRERVDGILTVSEEALLEAERLLFTR 271 (311)
T ss_dssp HHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCCSSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCCCCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHh
Confidence 99999999999999987652 2332 233456665432 2334557789999999999999999999999
Q ss_pred cCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcc
Q 023227 225 EGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLS 267 (285)
Q Consensus 225 ~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~ 267 (285)
+|+++||++|+++++++++.++ . +++||+|+ +||+.+++
T Consensus 272 ~gi~~epssa~alaa~~~~~~~--~-~~~vv~i~-tgg~~d~~ 310 (311)
T 1ve5_A 272 TKQVVEPTGALPLAAVLEHGAR--L-PQTLALLL-SGGNRDFS 310 (311)
T ss_dssp TCBCCCGGGGHHHHHHHHHGGG--S-CSEEEEEE-CBCCCCCC
T ss_pred cCceEchHHHHHHHHHHhhhhc--c-CCEEEEEE-CCCCCCCC
Confidence 9999999999999999998776 4 88999999 78886654
No 25
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=7.5e-53 Score=375.45 Aligned_cols=260 Identities=20% Similarity=0.267 Sum_probs=222.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
++|||||||||++.+++..+.+ ++. ++||++|+||||+|+|++|+++|++|++|||++++..|++.++.+||+|
T Consensus 49 ~~~ptGS~KdRga~~~i~~~~~~~~~-----~~vv~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V 123 (323)
T 1v71_A 49 NFQKMGAFKFRGALNALSQLNEAQRK-----AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQV 123 (323)
T ss_dssp GGSGGGBTHHHHHHHHHTTCCHHHHH-----HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEE
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhcCC-----CeEEEeCCCcHHHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEE
Confidence 4799999999999999976543 232 6799999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhh
Q 023227 80 VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEK 159 (285)
Q Consensus 80 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~ 159 (285)
+.+++ .++++.+.+++++++. +++|++||+||.+ +.||.|++.||++|++ .+|+||+|+|+|||++|++.++|+.
T Consensus 124 ~~~~~--~~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~ 198 (323)
T 1v71_A 124 IMYDR--YKDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGTAAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHF 198 (323)
T ss_dssp EEECT--TTTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTHHHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHH
T ss_pred EEECC--CHHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhHHHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHc
Confidence 99997 3566788888888886 6788999999988 7899999999999995 6999999999999999999999999
Q ss_pred CCCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCC---ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 160 NPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 160 ~~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
+|++|||+|||.+++++. .+++ ..+.+++++.+.. ++.+.++++|+++.|+|+|++++++.|++++||
T Consensus 199 ~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi 278 (323)
T 1v71_A 199 APNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHLGNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKI 278 (323)
T ss_dssp CTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCCcHHHHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCe
Confidence 999999999999987553 2322 1345677765432 234556889999999999999999999999999
Q ss_pred eeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHH
Q 023227 228 FVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 275 (285)
Q Consensus 228 ~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 275 (285)
++||++|+++++++++.++ .++++||+|+ +||+.+++ .|.+++
T Consensus 279 ~~eps~a~alaa~~~~~~~--~~~~~vv~i~-tGg~~~~~--~~~~~~ 321 (323)
T 1v71_A 279 VVEPTGCLSFAAARAMKEK--LKNKRIGIII-SGGNVDIE--RYAHFL 321 (323)
T ss_dssp CCCGGGGHHHHHHHHTGGG--GTTCEEEEEE-CBCCCCHH--HHHHHH
T ss_pred EEcHHHHHHHHHHHHhHHh--cCCCeEEEEe-CCCCCCHH--HHHHHH
Confidence 9999999999999988664 3788999999 78885554 455554
No 26
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=3.4e-52 Score=387.29 Aligned_cols=257 Identities=23% Similarity=0.279 Sum_probs=224.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
++|||||||+|++.+++..+.+++. .++||++|+||||+++|++|+++|++|+||||.+++..|++.++.+||+|+
T Consensus 54 ~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVv 129 (514)
T 1tdj_A 54 DRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVL 129 (514)
T ss_dssp GGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEE
T ss_pred CCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEE
Confidence 3699999999999999998765433 257999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC
Q 023227 81 LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN 160 (285)
Q Consensus 81 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~ 160 (285)
.++. +++++.+.+++++++. +++|++||+||.+ +.||+|++.||++|++. +|+||+|+|+||+++|++.++|+.+
T Consensus 130 lv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~eQl~~-~D~vvvpvGgGGliaGia~~lk~~~ 204 (514)
T 1tdj_A 130 LHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQQDAH-LDRVFVPVGGGGLAAGVAVLIKQLM 204 (514)
T ss_dssp CCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHC
T ss_pred EECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHHHCCC-CCEEEEccCcHHHHHHHHHHHHHhC
Confidence 9985 6889999999999886 7899999999998 79999999999999965 9999999999999999999999999
Q ss_pred CCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCC---ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCe
Q 023227 161 PNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFV---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLF 228 (285)
Q Consensus 161 ~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~---~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~ 228 (285)
|++|||||||.+++++. .+++ ..+.+++++...+ ++.++.+++|+++.|+|+|+.++++.|++++|++
T Consensus 205 P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l~~~~vd~~v~Vsd~ei~~ai~~L~~~~giv 284 (514)
T 1tdj_A 205 PQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAV 284 (514)
T ss_dssp TTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHHHTTSCCEEEEECHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHHHHHhCCeEEEECHHHHHHHHHHHHHHcCeE
Confidence 99999999999998764 2332 1234466654332 3456788999999999999999999999999999
Q ss_pred eehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcc
Q 023227 229 VGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLS 267 (285)
Q Consensus 229 ~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~ 267 (285)
+||++|++++++++++++...++++||+|+ |||+.+.+
T Consensus 285 vEPsgA~alAal~~~~~~~~~~g~~VV~I~-tGgn~d~~ 322 (514)
T 1tdj_A 285 AEPSGALALAGMKKYIALHNIRGERLAHIL-SGANVNFH 322 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCSCEEEEEC-CCCCCCTT
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCeEEEEE-eCCCCCHH
Confidence 999999999999998765444788999999 67775554
No 27
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=4.8e-52 Score=379.69 Aligned_cols=275 Identities=18% Similarity=0.197 Sum_probs=227.4
Q ss_pred CC-CCCCchhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH
Q 023227 2 ME-PCSSVKDRIGYSMISDAE--AKGL----IT-------PGES-VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL 66 (285)
Q Consensus 2 ~n-ptGS~K~R~a~~~~~~a~--~~g~----~~-------~g~~-~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~ 66 (285)
+| ||||||+|++.+++.++. +.|. +. .+.+ +||++|+||||+|+|++|+++|++|+||||++++.
T Consensus 69 ~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~ 148 (398)
T 4d9i_A 69 KRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQ 148 (398)
T ss_dssp GSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCH
T ss_pred CCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCH
Confidence 57 999999999999999884 3331 00 1126 89999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC-----CC-CCCchHhHHhchHHHHHhhhCCC---CC
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ-----FE-NPANPKIHYETTGPELWKGSGGR---ID 137 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~-~~~~~~~g~~t~~~EI~~q~~~~---~d 137 (285)
.|++.++.+||+|+.+++ +++++.+.+++++++. +++|++| |+ ||.+.+.||.|++.||++|++.. ||
T Consensus 149 ~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d 225 (398)
T 4d9i_A 149 ERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPT 225 (398)
T ss_dssp HHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCC
Confidence 999999999999999997 6889999999998887 7899986 65 35556899999999999999644 99
Q ss_pred EEEEccCCcccHHHHHHHHHhh--CCCcEEEEEecCCCCccC----CCCCC------CccccccCCCCC---ccCccccc
Q 023227 138 ALVSGIGTGGTITGAGKFLKEK--NPNIKLYGIEPTESPVLS----GGKPG------PHKIQGIGAGFV---PGVLEVNI 202 (285)
Q Consensus 138 ~iv~~vG~Gg~~aGi~~~~k~~--~~~~~vigv~~~~~~~~~----~~~~~------~~~~~gl~~~~~---~~~~~~~~ 202 (285)
+||+|+|+|||++|++.++|+. .|.++||+|||.+++++. .+++. .+..++++.+.. .+.+..++
T Consensus 226 ~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~p~~~~~~~~~~~ 305 (398)
T 4d9i_A 226 HVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNC 305 (398)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCCCC------CCTTCCCSSCCHHHHHHHHHH
T ss_pred EEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCCceeccccCCCCCHHHHHHHHHc
Confidence 9999999999999999999876 478999999999998764 23332 233455654431 23344788
Q ss_pred CCeEEEeCHHHHHHHHHHHHHhcC----CeeehhHHHHHHHHHHHH---------hcCC-CCCCEEEEEecCCCCCCcch
Q 023227 203 IDEVVQVSSDEAIETAKLLALKEG----LFVGISSGGAAAAAIEIA---------KRPE-NAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 203 ~d~~~~v~d~e~~~a~~~l~~~~g----i~~~p~~g~a~aa~~~~~---------~~~~-~~~~~vv~i~~~gG~~~~~~ 268 (285)
+|+++.|+|+|++++++.|++++| |++||++|++++++++++ +++. .++++||+|+ |||++|++
T Consensus 306 ~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epssa~alaa~~~~~~~~~~~~l~~~~~~~~~~~Vv~i~-tGG~~d~~- 383 (398)
T 4d9i_A 306 ATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVIS-TEGDTDVK- 383 (398)
T ss_dssp CCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHHHHHHHHHHHHHHSTTHHHHHHHTTCCTTCEEEEEE-CBCCSSHH-
T ss_pred CCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchHHHHHHHHHHhhhhhhhHHHHHhcCCCCCCEEEEEe-CCCCCCHH-
Confidence 999999999999999999999999 999999999999999884 3333 4788999999 68997776
Q ss_pred hhcHHHHHhhhccc
Q 023227 269 VLFESVRKEAESMT 282 (285)
Q Consensus 269 ~~~~~~~~~~~~~~ 282 (285)
.|.++++.....+
T Consensus 384 -~~~~~~~~g~~~~ 396 (398)
T 4d9i_A 384 -HYREVVWEGKHAV 396 (398)
T ss_dssp -HHHHHHTTCTTCC
T ss_pred -HHHHHHhcccCCC
Confidence 4888877665544
No 28
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=6.4e-52 Score=382.72 Aligned_cols=271 Identities=20% Similarity=0.225 Sum_probs=228.7
Q ss_pred CCCC-CCCchhHHHHHHHHH-----HHHcCCCCCCC----------------eEEEeeCCChHHHHHHHHHHHcCCeEEE
Q 023227 1 MMEP-CSSVKDRIGYSMISD-----AEAKGLITPGE----------------SVLIEPTSGNTGIGLAFMAAAKQYRLII 58 (285)
Q Consensus 1 ~~np-tGS~K~R~a~~~~~~-----a~~~g~~~~g~----------------~~vv~~ssGN~g~a~A~~a~~~G~~~~i 58 (285)
++|| |||||+|++.+++.. |+++|.+++|. .+|+++|+||||+|+|++|+++|++|+|
T Consensus 109 ~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~I 188 (442)
T 3ss7_X 109 SHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTV 188 (442)
T ss_dssp GGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEE
Confidence 3699 999999999999986 78999988875 4899999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCC----
Q 023227 59 TMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG---- 134 (285)
Q Consensus 59 v~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~---- 134 (285)
|||++++..|+..++.+||+|+.+++ +++++.+.+++++++.+++|+++++ |+.+++.||.|++.||++|+..
T Consensus 189 vmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~ 265 (442)
T 3ss7_X 189 HMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDPNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRI 265 (442)
T ss_dssp EEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCTTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCCCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999999999999999999996 6889999999999887678999984 5655689999999999999842
Q ss_pred ----CCCEEEEccCCcccHHHHHHHHHhh-CCCcEEEEEecCCCCccC----CCCC-----------CCccccccCCCCC
Q 023227 135 ----RIDALVSGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTESPVLS----GGKP-----------GPHKIQGIGAGFV 194 (285)
Q Consensus 135 ----~~d~iv~~vG~Gg~~aGi~~~~k~~-~~~~~vigv~~~~~~~~~----~~~~-----------~~~~~~gl~~~~~ 194 (285)
.||+||+|+|+||+++|++.++|+. +|++|||+|||.+++++. .+.. ..+.+++|+.+..
T Consensus 266 vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~ 345 (442)
T 3ss7_X 266 VDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRA 345 (442)
T ss_dssp CBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCCHHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBC
T ss_pred ccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCchHHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCC
Confidence 3669999999999999999999997 899999999999998652 2222 2344566665432
Q ss_pred ---ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcC------C-C----CCCEEEEEecC
Q 023227 195 ---PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRP------E-N----AGKLIVVIFPS 260 (285)
Q Consensus 195 ---~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~------~-~----~~~~vv~i~~~ 260 (285)
.+.+.++++|+++.|+|+|++++++.|++++||++||++|++++++++++++. . . ++++||+++|+
T Consensus 346 ~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssaaalAa~~~l~~~~~~~~~~~l~~~~~~~~~vv~i~TG 425 (442)
T 3ss7_X 346 SGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATG 425 (442)
T ss_dssp CSSHHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGGGGGGHHHHHHHCHHHHHHHTCCHHHHHTCEEEEEECB
T ss_pred chhHHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHHHHHHHHHHHHhchhhHHhcCCCcccCCCCeEEEEECC
Confidence 22344688999999999999999999999999999999999999999987631 1 1 27899999977
Q ss_pred CCCCCcchhhcHHHHH
Q 023227 261 FGERYLSSVLFESVRK 276 (285)
Q Consensus 261 gG~~~~~~~~~~~~~~ 276 (285)
||.++.+ .+.+++.
T Consensus 426 G~~~~~~--~~~~~~~ 439 (442)
T 3ss7_X 426 GGMVPEE--EMNQYLA 439 (442)
T ss_dssp CTTCCHH--HHHHHHH
T ss_pred CCCCCHH--HHHHHHH
Confidence 7776544 3555543
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=3.3e-52 Score=373.94 Aligned_cols=260 Identities=15% Similarity=0.125 Sum_probs=220.7
Q ss_pred CCC-C--CCCchhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCChHHHHHHHHHHHcCCeEEEEecCCCC-----HH---
Q 023227 1 MME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTSGNTGIGLAFMAAAKQYRLIITMPASMS-----LE--- 67 (285)
Q Consensus 1 ~~n-p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~--~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-----~~--- 67 (285)
++| | +||||+|++.+++.++.++|. ++||+ +|+||||+|+|++|+++|++|++|||++++ ..
T Consensus 40 ~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~ 114 (341)
T 1f2d_A 40 DCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYN 114 (341)
T ss_dssp GGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTT
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCcccccccccc
Confidence 368 9 999999999999999999887 68999 999999999999999999999999999887 34
Q ss_pred ---HHHHHHHcCCEEEEeCCCCCh---HHHHHHHHHHHHhCCCeE-ecCC-CCCCCchHhHHhchHHHHHhhhC---CCC
Q 023227 68 ---RRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAY-MLQQ-FENPANPKIHYETTGPELWKGSG---GRI 136 (285)
Q Consensus 68 ---~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~-~~~~~~~~~g~~t~~~EI~~q~~---~~~ 136 (285)
|+..++.+||+|+.++...+. +++.+.+++++++.+..| ++++ |+||.+ +.||.+++.||++|++ ..|
T Consensus 115 ~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~ 193 (341)
T 1f2d_A 115 RVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKF 193 (341)
T ss_dssp TSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCC
T ss_pred ccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcEEEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999974332 256777888888865344 5678 999998 6789999999999995 479
Q ss_pred CEEEEccCCcccHHHHHHHHHhhCCCcEEEEEecCCCCccCCCCC---CCccccccCCCC--CccCcccccCCeEEEeCH
Q 023227 137 DALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGAGF--VPGVLEVNIIDEVVQVSS 211 (285)
Q Consensus 137 d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~~~~---~~~~~~gl~~~~--~~~~~~~~~~d~~~~v~d 211 (285)
|+||+|+|||||++|++.++|+.+|++|||+|||.+++.+...+. ..+.+++++.+. .++.++.+++|+++.|+|
T Consensus 194 d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d 273 (341)
T 1f2d_A 194 DKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQTLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPN 273 (341)
T ss_dssp SEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHHHHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCC
T ss_pred CEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCC
Confidence 999999999999999999999999999999999999976542211 122334555332 344677889999999999
Q ss_pred HHHHHHHHHHHHhcCCeeeh-hHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcc
Q 023227 212 DEAIETAKLLALKEGLFVGI-SSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLS 267 (285)
Q Consensus 212 ~e~~~a~~~l~~~~gi~~~p-~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~ 267 (285)
+|++++++.|++++||++|| |+|+++++++++++++. .++++||+|+ |||+.++.
T Consensus 274 ~e~~~a~~~l~~~egi~~ep~~sa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~ 330 (341)
T 1f2d_A 274 EGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIKEDYFKPGANVLYVH-LGGAPALS 330 (341)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGG
T ss_pred HHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHhCCCCCCCeEEEEE-CCchHHhh
Confidence 99999999999999999999 69999999999988764 3788999998 89996554
No 30
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=7.5e-51 Score=368.96 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=220.7
Q ss_pred CCC-CCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 2 MEP-CSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 2 ~np-tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+|| |||||+|++.+++..+. +.++++ ++|+++|+||||+|+|++|+++|++|+||||+.++..|+.+|+.+||+|+
T Consensus 119 lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~~~ivmp~~~~~~k~~~~~~~GAeVv 195 (389)
T 1wkv_A 119 YNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVI 195 (389)
T ss_dssp GSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred CCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 699 99999999999999855 444555 68999999999999999999999999999999999999999999999999
Q ss_pred -EeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhC---CCCCEEEEccCCcccHHHHHHHH
Q 023227 81 -LTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSGIGTGGTITGAGKFL 156 (285)
Q Consensus 81 -~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~---~~~d~iv~~vG~Gg~~aGi~~~~ 156 (285)
.++. .+++++.+.+++++++. +++|++||+||.+++.||++++.||++|+. ..||+||+|+|+||+++|++.+|
T Consensus 196 ~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~ 273 (389)
T 1wkv_A 196 VDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYL 273 (389)
T ss_dssp EETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHH
T ss_pred EEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHH
Confidence 7773 25778888888887775 789999999998888999999999999984 36999999999999999999999
Q ss_pred HhhCCCcEEEEEecCCCCccCCCCCCCccccccCCCCCccCcccccCC-eEEEeCHHHHHHHHHHHHHhcCCeeehhHHH
Q 023227 157 KEKNPNIKLYGIEPTESPVLSGGKPGPHKIQGIGAGFVPGVLEVNIID-EVVQVSSDEAIETAKLLALKEGLFVGISSGG 235 (285)
Q Consensus 157 k~~~~~~~vigv~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~d-~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~ 235 (285)
|+..|++|||+|||.+++.+.+ ...+.+ .|..+....+| +++.|+|+|++++++.|++++||+++|+||+
T Consensus 274 k~~~p~vrvigVe~~~~~~l~G----i~~i~~-----~~~~~~~~~~dg~~~~Vsd~ea~~a~~~l~~~eGi~~~pssa~ 344 (389)
T 1wkv_A 274 QSVDPSIRAVLVQPAQGDSIPG----IRRVET-----GMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGA 344 (389)
T ss_dssp HHHCTTCEEEEEEECTTCCCTT----CCCGGG-----CCSHHHHSCCCCEEEEECHHHHHHHHHHHHHHHSCCBCHHHHH
T ss_pred HHhCCCCeEEEEecCCCCcccc----ccccCC-----cchhhhhheeccEEEEECHHHHHHHHHHHHHHcCCeEChHHHH
Confidence 9999999999999998865531 111111 12222345577 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHHHhhh
Q 023227 236 AAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVRKEAE 279 (285)
Q Consensus 236 a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~~~~~ 279 (285)
++++++++++++..+.+.+|+++|++|+||+++ +.++.....
T Consensus 345 alaa~~~l~~~g~~~~~~vVviltg~G~k~~~~--~~~~~~~~~ 386 (389)
T 1wkv_A 345 AVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSL--VQNALEGAG 386 (389)
T ss_dssp HHHHHHHHHHTTCSCSEEEEEEECBBGGGCHHH--HHHHHC---
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCCccCHHH--HHHHHHhcC
Confidence 999999998876544456888998999999997 445554433
No 31
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=1.8e-51 Score=366.77 Aligned_cols=264 Identities=20% Similarity=0.179 Sum_probs=222.1
Q ss_pred CCCC--CCCchhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHc
Q 023227 1 MMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEP--TSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAF 75 (285)
Q Consensus 1 ~~np--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~--ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~ 75 (285)
++|| +||||+|++.+++.+++++|. ++||++ |+||||+|+|++|+.+|++|++|||+++ +..|++.++.+
T Consensus 44 ~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~ 118 (325)
T 1j0a_A 44 DLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIM 118 (325)
T ss_dssp GGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHT
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHC
Confidence 3689 999999999999999999997 689996 9999999999999999999999999999 99999999999
Q ss_pred CCEEEEeCCCCCh---HHHHHHHHHHHHhCCCeE-ecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHH
Q 023227 76 GAELVLTDPAKGM---KGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITG 151 (285)
Q Consensus 76 Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aG 151 (285)
||+|+.++...+. .++.+.+++++++.+..| +..++.||.+ ..||.+++.||++|++..||+||+|+|||||++|
T Consensus 119 GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~-~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~G 197 (325)
T 1j0a_A 119 GIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG-TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAG 197 (325)
T ss_dssp TCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH-HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHH
T ss_pred CCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH-HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHH
Confidence 9999999975432 256778888888764434 4566778877 6789999999999997679999999999999999
Q ss_pred HHHHHHhhCCCcEEEEEecCCCCccCCCCC---CCccccccC-CCCCccCcccccCCeEEEeCHHHHHHHHHHHHHhcCC
Q 023227 152 AGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIG-AGFVPGVLEVNIIDEVVQVSSDEAIETAKLLALKEGL 227 (285)
Q Consensus 152 i~~~~k~~~~~~~vigv~~~~~~~~~~~~~---~~~~~~gl~-~~~~~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi 227 (285)
++.++|+.+|++|||+|||.+++.+..... ......+++ .+..|+.++.+++|+ +.|+|+|++++++.|++++||
T Consensus 198 i~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi 276 (325)
T 1j0a_A 198 LSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGI 276 (325)
T ss_dssp HHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCCCSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCCCCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCc
Confidence 999999999999999999999976642211 011122344 334677888899999 999999999999999999999
Q ss_pred eeeh-hHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchhhcHHHH
Q 023227 228 FVGI-SSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSVLFESVR 275 (285)
Q Consensus 228 ~~~p-~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~~~~~~~ 275 (285)
++|| |+|+++++++++++++.. +++||+|+ |||+.++. -|.+.+
T Consensus 277 ~~ep~ssa~a~aa~~~~~~~~~~-~~~Vv~i~-tGG~~~~~--~~~~~~ 321 (325)
T 1j0a_A 277 ILDPVYTGKAFYGLVDLARKGEL-GEKILFIH-TGGISGTF--HYGDKL 321 (325)
T ss_dssp CCCTTTHHHHHHHHHHHHHTTCS-CSEEEEEE-CCCHHHHH--HTHHHH
T ss_pred ccccchHHHHHHHHHHHHHcCCC-CCcEEEEE-CCCchhhh--chHHHH
Confidence 9999 699999999999887654 88999998 89985443 355443
No 32
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=2.2e-51 Score=368.43 Aligned_cols=260 Identities=20% Similarity=0.199 Sum_probs=218.3
Q ss_pred CCCC--CCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CChHHHHHHHHHHHcCCeEEEEecCCCCH--------HH
Q 023227 1 MMEP--CSSVKDRIGYSMISDAEAKGLITPGESVLIEPT--SGNTGIGLAFMAAAKQYRLIITMPASMSL--------ER 68 (285)
Q Consensus 1 ~~np--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~s--sGN~g~a~A~~a~~~G~~~~iv~p~~~~~--------~~ 68 (285)
++|| +||||+|++.+++.+++++|. ++||++| +||||+|+|++|+++|++|+||||++++. .|
T Consensus 55 ~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k 129 (342)
T 4d9b_A 55 DVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGN 129 (342)
T ss_dssp GGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHH
T ss_pred CCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccch
Confidence 3699 999999999999999999987 7899986 79999999999999999999999998873 58
Q ss_pred HHHHHHcCCEEEEeCCCCChHHHH-HHHHHHHHhCCCeEec-CCCCCCCchHhHHhchHHHHHhhhC--CCCCEEEEccC
Q 023227 69 RIILRAFGAELVLTDPAKGMKGAV-QKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSG--GRIDALVSGIG 144 (285)
Q Consensus 69 ~~~~~~~Ga~v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~~~~~~~~~~g~~t~~~EI~~q~~--~~~d~iv~~vG 144 (285)
+..++.+||+|+.++...+++++. +.++++.++.+..|++ .++.||.+ ..||.|++.||++|++ ..||+||+|+|
T Consensus 130 ~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vG 208 (342)
T 4d9b_A 130 RLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGGSSALG-AMGYVESALEIAQQCEEVVGLSSVVVASG 208 (342)
T ss_dssp HHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGGCSHHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEES
T ss_pred HHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCCCChHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCC
Confidence 999999999999999755555554 4567777665333433 34445555 6799999999999996 47999999999
Q ss_pred CcccHHHHHHHHHhhCCCcEEEEEecCCCCccCCCCC---CCccccccCC-CCCccCcccccCCeEEEeCHHHHHHHHHH
Q 023227 145 TGGTITGAGKFLKEKNPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGA-GFVPGVLEVNIIDEVVQVSSDEAIETAKL 220 (285)
Q Consensus 145 ~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~~~~~---~~~~~~gl~~-~~~~~~~~~~~~d~~~~v~d~e~~~a~~~ 220 (285)
||||++|++.++|+.+|++|||+|||.+++.+..... ..+.+++|+. +..++.++.+++|+++.|+|+|++++++.
T Consensus 209 tGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~ 288 (342)
T 4d9b_A 209 SAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKL 288 (342)
T ss_dssp SSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHHHHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHHHHHcCCCCccceEEEecCCCceEecCCHHHHHHHHH
Confidence 9999999999999999999999999999976532111 1233467766 55677888999999999999999999999
Q ss_pred HHHhcCCeeehh-HHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcc
Q 023227 221 LALKEGLFVGIS-SGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLS 267 (285)
Q Consensus 221 l~~~~gi~~~p~-~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~ 267 (285)
|++++||++||+ +|+++++++++++++. .++++||+|+ |||+.++.
T Consensus 289 l~~~~gi~~epsYsa~a~aa~~~~~~~~~~~~~~~Vv~i~-tGGn~~~~ 336 (342)
T 4d9b_A 289 LASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIH-TGGAPALF 336 (342)
T ss_dssp HHHHHSCCCCTTTHHHHHHHHHHHHHHTCSSSSSCEEEEE-CCCTTHHH
T ss_pred HHHhcCccccccHHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCccchh
Confidence 999999999996 9999999999988755 4788999999 89995544
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=5.1e-50 Score=359.40 Aligned_cols=259 Identities=17% Similarity=0.198 Sum_probs=213.5
Q ss_pred CC-C--CCCchhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCChHHHHHHHHHHHcCCeEEEEecCCCCHH--------H
Q 023227 2 ME-P--CSSVKDRIGYSMISDAEAKGLITPGESVLIE--PTSGNTGIGLAFMAAAKQYRLIITMPASMSLE--------R 68 (285)
Q Consensus 2 ~n-p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~--~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~--------~ 68 (285)
+| | |||||+|++.+++.++.++|. ++||+ +|+||||+|+|++|+++|++|++|||++++.. |
T Consensus 41 ~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k 115 (338)
T 1tzj_A 41 CNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGN 115 (338)
T ss_dssp GSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCcc
Confidence 56 7 999999999999999998887 68898 79999999999999999999999999988765 9
Q ss_pred HHHHHHcCCEEEEeCCCCChH---HHHHHHHHHHHhCCCeEec-CC-CCCCCchHhHHhchHHHHHhhhC---CCCCEEE
Q 023227 69 RIILRAFGAELVLTDPAKGMK---GAVQKAEEILAKTPNAYML-QQ-FENPANPKIHYETTGPELWKGSG---GRIDALV 140 (285)
Q Consensus 69 ~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~-~~-~~~~~~~~~g~~t~~~EI~~q~~---~~~d~iv 140 (285)
++.++.+||+|+.+++..+.. .+.+.+++++++.+..|++ ++ ++||.+ +.||.+++.||++|+. ..||+||
T Consensus 116 ~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv 194 (338)
T 1tzj_A 116 IQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVV 194 (338)
T ss_dssp HHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEECCGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEE
T ss_pred HHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEEeCCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 999999999999998742211 2467778888776444544 55 899998 7899999999999995 4799999
Q ss_pred EccCCcccHHHHHHHHHhh-CCCcEEEEEecCCCCccCCCCC---CCccccccCCCC----CccCcccccCCeEEEeCHH
Q 023227 141 SGIGTGGTITGAGKFLKEK-NPNIKLYGIEPTESPVLSGGKP---GPHKIQGIGAGF----VPGVLEVNIIDEVVQVSSD 212 (285)
Q Consensus 141 ~~vG~Gg~~aGi~~~~k~~-~~~~~vigv~~~~~~~~~~~~~---~~~~~~gl~~~~----~~~~~~~~~~d~~~~v~d~ 212 (285)
+|+|+|||++|++.++|+. .|+ |||+|||.+++.+..... ..+.+++++.+. ..+.+.++++|+++.|+|+
T Consensus 195 ~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~ 273 (338)
T 1tzj_A 195 VCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTREQITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNE 273 (338)
T ss_dssp EEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHHHHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCH
T ss_pred EecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHHHHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCH
Confidence 9999999999999999998 888 999999999875532111 112233344222 2234567788999999999
Q ss_pred HHHHHHHHHHHhcCCeeeh-hHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcch
Q 023227 213 EAIETAKLLALKEGLFVGI-SSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 213 e~~~a~~~l~~~~gi~~~p-~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~ 268 (285)
|++++++.|++++||++|| |+|+++++++++++++. .++++||+|+ |||++|++.
T Consensus 274 e~~~a~~~l~~~~gi~~ep~ysa~alaa~~~~~~~~~~~~~~~Vv~i~-tGG~~~~~~ 330 (338)
T 1tzj_A 274 GTLEAIRLCARTEGMLTDPVYEGKSMHGMIEMVRNGEFPEGSRVLYAH-LGGVPALNG 330 (338)
T ss_dssp HHHHHHHHHHHHHSCCCCTTTHHHHHHHHHHHHHTTCSCTTCEEEEEE-CCCGGGGGG
T ss_pred HHHHHHHHHHHhcCCccccchHHHHHHHHHHHHHcCCCCCCCeEEEEE-CCCcccccc
Confidence 9999999999999999999 59999999999988764 3788999998 899988875
No 34
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=1.6e-47 Score=356.85 Aligned_cols=259 Identities=19% Similarity=0.170 Sum_probs=211.6
Q ss_pred CCCCCCCchhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcC
Q 023227 1 MMEPCSSVKDRIGYSMISDAEA---KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFG 76 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~---~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~G 76 (285)
++|||||||||++.+++..+.+ +++ +.++||++|+||||+|+|++|+++|++|+||+|++ ++..|+.+++.+|
T Consensus 155 ~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~G 231 (486)
T 1e5x_A 155 GISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANG 231 (486)
T ss_dssp TSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHTT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999988876554 332 23689999999999999999999999999999996 9999999999999
Q ss_pred CEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCC-CCCEEEEccCCcccHHHHHHH
Q 023227 77 AELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG-RIDALVSGIGTGGTITGAGKF 155 (285)
Q Consensus 77 a~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~-~~d~iv~~vG~Gg~~aGi~~~ 155 (285)
|+|+.+++ +|+++.+.+++++++. ++++++++ ||.+ +.||.|+++||++|+++ .||+||+|+|+||+++|++.+
T Consensus 232 A~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a 306 (486)
T 1e5x_A 232 AFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKG 306 (486)
T ss_dssp CEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHHHHHHHHTTSCCCSEEEEECSSTHHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHHHHHHHHcCCCCCCEEEEeCCcHHHHHHHHHH
Confidence 99999997 5889999999998886 78889887 8887 78999999999999964 599999999999999999999
Q ss_pred HHhhC------CCcEEEEEecCCCCccC----CCC--C-----CCccccccCCCCCccCcc--cccCCe----EEEeCHH
Q 023227 156 LKEKN------PNIKLYGIEPTESPVLS----GGK--P-----GPHKIQGIGAGFVPGVLE--VNIIDE----VVQVSSD 212 (285)
Q Consensus 156 ~k~~~------~~~~vigv~~~~~~~~~----~~~--~-----~~~~~~gl~~~~~~~~~~--~~~~d~----~~~v~d~ 212 (285)
||+.. |.+|||+||+++++++. .++ . ..+.+++|+.+. |.++. .+.+|+ ++.|+|+
T Consensus 307 ~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~gi~i~~-p~~~~~~~~~~~~~~g~~~~Vsd~ 385 (486)
T 1e5x_A 307 FKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGD-PVSIDRAVYALKKCNGIVEEATEE 385 (486)
T ss_dssp HHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC-----------------CCCHHHHHHHHHTTCEEEEECHH
T ss_pred HHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCccccCCC-CccHHHHHHHHhccCCeEEEECHH
Confidence 98864 78999999999887653 232 1 234556766542 32222 223444 9999999
Q ss_pred HHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCC-CCCCEEEEEecCCCCCCcchh
Q 023227 213 EAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPE-NAGKLIVVIFPSFGERYLSSV 269 (285)
Q Consensus 213 e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~-~~~~~vv~i~~~gG~~~~~~~ 269 (285)
|++++++ +++++|+++||+||+++++++++.+++. .++++||+++|++|.||.+++
T Consensus 386 e~~~ai~-l~~~eGi~~ePssA~alaa~~~~~~~g~~~~~~~vV~i~Tg~~~k~~~~v 442 (486)
T 1e5x_A 386 ELMDAMA-QADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSK 442 (486)
T ss_dssp HHHHHHH-HHHHTTCCCCHHHHHHHHHHHHHHHTTSSCTTCCEEEEECBCGGGGHHHH
T ss_pred HHHHHHH-HHHHCCeEEChhHHHHHHHHHHHHHhcCCCCCCeEEEEeCCCCccCHHHH
Confidence 9999999 7788999999999999999999987754 467899999999999998863
No 35
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-47 Score=349.26 Aligned_cols=263 Identities=21% Similarity=0.238 Sum_probs=204.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCC
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGA 77 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---~~~~~~~~~~~Ga 77 (285)
++|||||||+|++.+++..+.++|+ ...|+++|+||||+|+|++|+++|++|+||||+.. +..|+.+++.+||
T Consensus 101 ~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA 176 (418)
T 1x1q_A 101 DLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGA 176 (418)
T ss_dssp GGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEHHHHHTCHHHHHHHHHTTC
T ss_pred cCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHHcCCCEEEEECCCcchhhhHHHHHHHHCCC
Confidence 4799999999999999998888886 23445689999999999999999999999999852 2367889999999
Q ss_pred EEEEeCC-CCChHHHHHHHHH-HHHhCCCeEe-cCCCCCCC----chHhHHhchHHHHHhhh----CCCCCEEEEccCCc
Q 023227 78 ELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENPA----NPKIHYETTGPELWKGS----GGRIDALVSGIGTG 146 (285)
Q Consensus 78 ~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~----~~~~g~~t~~~EI~~q~----~~~~d~iv~~vG~G 146 (285)
+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+. ++..||+|++.||++|+ +..||+||+|+|+|
T Consensus 177 ~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgG 256 (418)
T 1x1q_A 177 EVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGG 256 (418)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHHHHHHHHHHHHSSCCSEEEEECSSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEecCCc
Confidence 9999984 3468888877754 4666545555 55554433 21259999999999998 34599999999999
Q ss_pred ccHHHHHHHHHhh-CCCcEEEEEecCCCCc--------cCCCCC--------------------CCccccccCCCCC---
Q 023227 147 GTITGAGKFLKEK-NPNIKLYGIEPTESPV--------LSGGKP--------------------GPHKIQGIGAGFV--- 194 (285)
Q Consensus 147 g~~aGi~~~~k~~-~~~~~vigv~~~~~~~--------~~~~~~--------------------~~~~~~gl~~~~~--- 194 (285)
|+++|++.++|++ .|++|||||||.++.. +..+.+ ..+..++|..+..
T Consensus 257 G~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~ 336 (418)
T 1x1q_A 257 SNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYDHDGQITPAHSVSAGLDYPGVGPE 336 (418)
T ss_dssp SHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEEEEBCCC----------------CSBCCHH
T ss_pred HhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeeccccccccccccccccCCceeeeccCCCCCCHH
Confidence 9999999999987 8999999999999742 112221 1123344443221
Q ss_pred ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 195 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 195 ~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
.+.+....+|+++.|+|+|++++++.|++++||+++|++|+++++++++.++. .++++||+++|++|+||+++
T Consensus 337 ~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~~~~~~-~~~~~Vv~vlsG~g~kd~~~ 409 (418)
T 1x1q_A 337 HSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVPEM-DKDQVVVINLSGRGDKDVTE 409 (418)
T ss_dssp HHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHTTTS-CTTCEEEEEECBBGGGTHHH
T ss_pred HHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHhc-CCCCeEEEEECCCCCCCHHH
Confidence 12234556789999999999999999999999999999999999999887653 37889999997778999886
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=3e-46 Score=340.84 Aligned_cols=261 Identities=21% Similarity=0.240 Sum_probs=207.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCChHHHHHHHHHHHcCCeEEEEecCC-CC--HHHHHHHHHcC
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLI-EPTSGNTGIGLAFMAAAKQYRLIITMPAS-MS--LERRIILRAFG 76 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv-~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~--~~~~~~~~~~G 76 (285)
++|||||||+|++.+++..+.++|. +++| ++|+||||+|+|++|+++|++|+||||+. .+ ..|+.+++.+|
T Consensus 74 ~~~ptGSfK~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a~A~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~G 148 (388)
T 1v8z_A 74 DLVHGGAHKTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLG 148 (388)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHHHHHHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCC
Confidence 3699999999999999999888886 4566 48999999999999999999999999984 23 46789999999
Q ss_pred CEEEEeCC-CCChHHHHHHHHH-HHHhCCCeE-ecCCCCCCCc----hHhHHhchHHHHHhhh----CCCCCEEEEccCC
Q 023227 77 AELVLTDP-AKGMKGAVQKAEE-ILAKTPNAY-MLQQFENPAN----PKIHYETTGPELWKGS----GGRIDALVSGIGT 145 (285)
Q Consensus 77 a~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~-~~~~~~~~~~----~~~g~~t~~~EI~~q~----~~~~d~iv~~vG~ 145 (285)
|+|+.++. ..+++++.+.+.+ ++++.++.+ .++++.|+.+ +..||+|++.||++|+ +..||+||+|+|+
T Consensus 149 A~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~ 228 (388)
T 1v8z_A 149 ANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGG 228 (388)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCc
Confidence 99999985 3467888777754 566654544 4567666542 2348999999999998 4459999999999
Q ss_pred cccHHHHHHHHHhhCCCcEEEEEecCCCCc--------cCCCCC--------------------CCccccccCCCC---C
Q 023227 146 GGTITGAGKFLKEKNPNIKLYGIEPTESPV--------LSGGKP--------------------GPHKIQGIGAGF---V 194 (285)
Q Consensus 146 Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~--------~~~~~~--------------------~~~~~~gl~~~~---~ 194 (285)
|||++|++.+++ ..|.+|||+|||.++.. +..+++ ..+.++++.... .
T Consensus 229 GG~~aGi~~~~~-~~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~ 307 (388)
T 1v8z_A 229 GSNAMGIFYPFV-NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPE 307 (388)
T ss_dssp SHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEETTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHH
T ss_pred cHhHHHHHHHHh-hCCCceEEEEccCccccchhhhhHHHhcCCceeccccccccccccccccCCCceeeeccccCCCChh
Confidence 999999999998 48999999999998642 111211 122334443321 1
Q ss_pred ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 195 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 195 ~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
.+.+..+.+|+++.|+|+|++++++.|++++||+++|++|++++++++++++. .++++||+|+|++|+||+++
T Consensus 308 ~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~-~~~~~vv~i~tg~g~k~~~~ 380 (388)
T 1v8z_A 308 HAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEM-SRDEIIIVNLSGRGDKDLDI 380 (388)
T ss_dssp HHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHTS-CTTCEEEEEECBBSGGGHHH
T ss_pred HHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccHHHHHHHHHHHHHhc-CCCCEEEEEECCCCccCHHH
Confidence 12334566799999999999999999999999999999999999999988763 47889999998888899885
No 37
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=1.1e-46 Score=344.23 Aligned_cols=262 Identities=21% Similarity=0.235 Sum_probs=208.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHHHHHHcCCeEEEEecCC-CCH--HHHHHHHHcC
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIE-PTSGNTGIGLAFMAAAKQYRLIITMPAS-MSL--ERRIILRAFG 76 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~--~~~~~~~~~G 76 (285)
++|||||||+|++.+++..+.++|+ +++|+ +|+||||+|+|++|+++|++|+||||+. .+. .|+.+|+.+|
T Consensus 78 ~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~aa~~~G~~~~i~mp~~~~~~~~~~~~~~~~~G 152 (396)
T 1qop_B 78 DLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMG 152 (396)
T ss_dssp GGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred cCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHHHHHCCCcEEEEEcCCchhhhhhHHHHHHHCC
Confidence 4799999999999999999988887 46676 8999999999999999999999999985 433 4678999999
Q ss_pred CEEEEeCC-CCChHHHHHHHHHH-HHhCCCeEe-cCCCCCCC----chHhHHhchHHHHHhhh----CCCCCEEEEccCC
Q 023227 77 AELVLTDP-AKGMKGAVQKAEEI-LAKTPNAYM-LQQFENPA----NPKIHYETTGPELWKGS----GGRIDALVSGIGT 145 (285)
Q Consensus 77 a~v~~~~~-~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~~~~----~~~~g~~t~~~EI~~q~----~~~~d~iv~~vG~ 145 (285)
|+|+.++. ..+++++.+.+.+. +++.++.+| ++++.|+. ++..||++++.||++|+ +..||+||+|+|+
T Consensus 153 A~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~ 232 (396)
T 1qop_B 153 AEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGG 232 (396)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTTTHHHHHHHHHHHHHHSSCCSEEEEECSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCc
Confidence 99999984 44678888777754 666545544 45554442 22348999999999999 5569999999999
Q ss_pred cccHHHHHHHHHhhCCCcEEEEEecCCCCc--------cCCCCC--------------------CCccccccCCCCC---
Q 023227 146 GGTITGAGKFLKEKNPNIKLYGIEPTESPV--------LSGGKP--------------------GPHKIQGIGAGFV--- 194 (285)
Q Consensus 146 Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~--------~~~~~~--------------------~~~~~~gl~~~~~--- 194 (285)
||+++|++.+++ ..|.+|||+|||.++.. +..+++ ..+.+++|..+..
T Consensus 233 GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~ 311 (396)
T 1qop_B 233 GSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQ 311 (396)
T ss_dssp SHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETEEEEEECBCTTSCBCCCCCSSGGGCCSSCCHH
T ss_pred hHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeeccchhhhcccccCCcCCCceeeccCCCCCCCHH
Confidence 999999999998 48999999999998641 211221 1223345543211
Q ss_pred ccCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 195 PGVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 195 ~~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
.+.+....+|+++.|+|+|++++++.|++++||+++|++|+++++++++.++...++++||+++|++|+||+++
T Consensus 312 ~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~sa~a~a~a~~l~~~~~~~~~~vv~i~tg~g~k~~~~ 385 (396)
T 1qop_B 312 HAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFT 385 (396)
T ss_dssp HHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHHHHHHHHHHHHHHHSTTSCEEEEEEECBBCGGGHHH
T ss_pred HHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHH
Confidence 23344667899999999999999999999999999999999999999987664226789999998888999886
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=2.2e-45 Score=337.27 Aligned_cols=262 Identities=23% Similarity=0.261 Sum_probs=195.7
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---HHHHHHHHHcCC
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGA 77 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~---~~~~~~~~~~Ga 77 (285)
++|||||||+|++.+++..+.+.|+ ...|+++|+||||+|+|++|+++|++|+||||+... ..|+.+|+.+||
T Consensus 105 ~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA 180 (422)
T 2o2e_A 105 DLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACALLGLDCVIYMGGIDTARQALNVARMRLLGA 180 (422)
T ss_dssp GGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHSHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHHHcCCcEEEEeCCCcchhhHHHHHHHHHCCC
Confidence 4799999999999999999988886 245556899999999999999999999999998532 467889999999
Q ss_pred EEEEeCC-CCChHHHHHHHHH-HHHhCCCeEe-cCCCCCC--C--chHhHHhchHHHHHhhh----CCCCCEEEEccCCc
Q 023227 78 ELVLTDP-AKGMKGAVQKAEE-ILAKTPNAYM-LQQFENP--A--NPKIHYETTGPELWKGS----GGRIDALVSGIGTG 146 (285)
Q Consensus 78 ~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~--~--~~~~g~~t~~~EI~~q~----~~~~d~iv~~vG~G 146 (285)
+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.++ . ++..||++++.||.+|+ +..||+||+|+|+|
T Consensus 181 ~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~G 260 (422)
T 2o2e_A 181 EVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDFQRIIGMEARVQIQGQAGRLPDAVVACVGGG 260 (422)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHHTTHHHHHHHHHHHHHSSSCCSEEEEEGGGH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEccCCc
Confidence 9999985 3468888877744 5666546555 5555432 2 22348999999999997 34599999999999
Q ss_pred ccHHHHHHHHHhhCCCcEEEEEecCCCC--------ccCCCCCC--------------------CccccccCCCC---Cc
Q 023227 147 GTITGAGKFLKEKNPNIKLYGIEPTESP--------VLSGGKPG--------------------PHKIQGIGAGF---VP 195 (285)
Q Consensus 147 g~~aGi~~~~k~~~~~~~vigv~~~~~~--------~~~~~~~~--------------------~~~~~gl~~~~---~~ 195 (285)
|+++|++.+++. .|.+|||||||.++. .+..+++. .+..++|..+. ..
T Consensus 261 G~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~ 339 (422)
T 2o2e_A 261 SNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSFSYLLQDEDGQTIESHSISAGLDYPGVGPEH 339 (422)
T ss_dssp HHHHTTSGGGTT-CTTCEEEEEEECC------------------------------------------------------
T ss_pred hhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceeccccchhhcccccccccCCceeecccCCCCCCHHH
Confidence 999999888864 789999999999872 23223221 11223443211 12
Q ss_pred cCcccccCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 196 GVLEVNIIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 196 ~~~~~~~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
+.+....+|+++.|+|+|++++++.|+++|||++++++|++++++++++++. .++++||+++|++|+||+++
T Consensus 340 ~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~esa~A~a~a~~l~~~~-~~~~~vvvilsG~g~kd~~~ 411 (422)
T 2o2e_A 340 AWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIESAHAVAGALKLGVEL-GRGAVIVVNLSGRGDKDVET 411 (422)
T ss_dssp -------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-CTTCEEEEECCSCSSSHHHH
T ss_pred HHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchHHHHHHHHHHHHHhc-CCCCEEEEEeCCCCCCCHHH
Confidence 3345566799999999999999999999999999999999999999887653 36789999998889999886
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=3.7e-43 Score=323.18 Aligned_cols=252 Identities=14% Similarity=0.087 Sum_probs=202.8
Q ss_pred CCCCCCchhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCChHHHHHH-HHHHHcCCeEEEEecC-CCCHHHHHHHHHcC
Q 023227 2 MEPCSSVKDRIGYSMI---SDAEAKGLITPGESVLIEPTSGNTGIGLA-FMAAAKQYRLIITMPA-SMSLERRIILRAFG 76 (285)
Q Consensus 2 ~nptGS~K~R~a~~~~---~~a~~~g~~~~g~~~vv~~ssGN~g~a~A-~~a~~~G~~~~iv~p~-~~~~~~~~~~~~~G 76 (285)
+|||||||||++.+++ .++ +++. ..+|+++|+||||.|+| ++|+++|++|+||||+ +++..|+++|+.+|
T Consensus 100 ~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~~~G~~~~I~~P~~~~s~~k~~~m~~~G 174 (428)
T 1vb3_A 100 HGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLG 174 (428)
T ss_dssp CSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHSCC
T ss_pred CCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhhhcCCeEEEEECCCCCCHHHHHHHHhcC
Confidence 4799999999999884 445 2232 37899999999999999 5999999999999999 59999999999999
Q ss_pred CEE--EEeCCCCChHHHHHHHHHHHHh-----CCCeEecCCCCCCCchHhHHhchHHHHHhhhCC---CCCEEEEccCCc
Q 023227 77 AEL--VLTDPAKGMKGAVQKAEEILAK-----TPNAYMLQQFENPANPKIHYETTGPELWKGSGG---RIDALVSGIGTG 146 (285)
Q Consensus 77 a~v--~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~---~~d~iv~~vG~G 146 (285)
|+| +.+++ +++++.+.++++.++ ..++++++++ ||.+ +.||.++++||++|+.+ .+|+||+|+|+|
T Consensus 175 A~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~-~~gq~t~~~Ei~~ql~~~g~~~d~vvvpvG~G 250 (428)
T 1vb3_A 175 GNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANSI-NISR-LLAQICYYFEAVAQLPQETRNQLVVSVPSGNF 250 (428)
T ss_dssp TTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHH-HHHTTHHHHHHHTTSCTTTTTSEEEEEECSSC
T ss_pred CeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHH-HHHHHHHHHHHHHHcccccCCCCEEEEeCCch
Confidence 999 66664 688888888777642 1256677664 6766 78999999999999964 599999999999
Q ss_pred ccHHHHHHHHHhhCCCcEEEEEecCCCCcc----CCCCC-----CCccccccCCCCCccCcc------ccc-----CCeE
Q 023227 147 GTITGAGKFLKEKNPNIKLYGIEPTESPVL----SGGKP-----GPHKIQGIGAGFVPGVLE------VNI-----IDEV 206 (285)
Q Consensus 147 g~~aGi~~~~k~~~~~~~vigv~~~~~~~~----~~~~~-----~~~~~~gl~~~~~~~~~~------~~~-----~d~~ 206 (285)
|+++|++.+++...|.+|||++++.++ .+ ..|.. ..+..++|+... |.++. .+. .+++
T Consensus 251 G~i~G~~~a~~~g~p~~kii~a~~~~~-~l~~~~~~G~~~~~~~~~tis~g~~i~~-p~~~~~~~~l~~~~~~~~~~~~~ 328 (428)
T 1vb3_A 251 GDLTAGLLAKSLGLPVKRFIAATNVND-TVPRFLHDGQWSPKATQATLSNAMDVSQ-PNNWPRVEELFRRKIWQLKELGY 328 (428)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEECSCC-HHHHHHHHSCCCCCCCCCCSSGGGCCSS-CTTHHHHHHHHHHTTCCGGGSEE
T ss_pred HHHHHHHHHHHcCCCCCeEEeecCCCh-HHHHHHHcCCcccCCCCCcccchhcCCC-CccHHHHHHHHhcchhhhhCcEE
Confidence 999999999998888889999998763 33 22332 123345554432 33221 222 6799
Q ss_pred EEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCCCCcchh
Q 023227 207 VQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIFPSFGERYLSSV 269 (285)
Q Consensus 207 ~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~~~gG~~~~~~~ 269 (285)
+.|+|+|++++++.| +++|+++||+||+++++++++.+ ++++||+++|++|.||++++
T Consensus 329 ~~Vsd~e~~~a~~~l-~~eGi~~~p~sa~a~aa~~~~~~----~~~~vV~i~tg~~~K~~~~v 386 (428)
T 1vb3_A 329 AAVDDETTQQTMREL-KELGYTSEPHAAVAYRALRDQLN----PGEYGLFLGTAHPAKFKESV 386 (428)
T ss_dssp EECCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHTTCC----TTCEEEEEECBCGGGGHHHH
T ss_pred EEECHHHHHHHHHHH-HHCCeEECchHHHHHHHHHHHhC----CCCcEEEEeCCCCCCCHHHH
Confidence 999999999999999 99999999999999999987643 56899999989999999873
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=3.6e-39 Score=297.29 Aligned_cols=253 Identities=15% Similarity=0.124 Sum_probs=198.6
Q ss_pred CCCCCCCchhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHH-HHHHHHHHcCCeEEEEecCC-CCHHHHHHHHH
Q 023227 1 MMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGI-GLAFMAAAKQYRLIITMPAS-MSLERRIILRA 74 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~~ssGN~g~-a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~ 74 (285)
|+|||||||||++.++ +..+. ++|. ..+|+++|+||||. ++|++|+++|++++||||++ +++.|+.+|+.
T Consensus 109 ~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~Gi~~~I~~P~~~~s~~k~~~~~~ 184 (468)
T 4f4f_A 109 FHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRDNTDIFILFPNGRVSPVQQRQMTS 184 (468)
T ss_dssp CCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCSSEEEEEEEETTCSCHHHHHHHHC
T ss_pred ccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhccCCcEEEEeCCCCCCHHHHHHHHh
Confidence 6899999999999999 66664 5555 25899999999995 55777999999999999998 99999999999
Q ss_pred cCC-EE--EEeCCCCChHHHHHHHHHHHHhCC-----CeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCE---EEEcc
Q 023227 75 FGA-EL--VLTDPAKGMKGAVQKAEEILAKTP-----NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDA---LVSGI 143 (285)
Q Consensus 75 ~Ga-~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~---iv~~v 143 (285)
+|+ +| +.+++ +|+++.+.+++++++.+ +++++++ .||.. +.||+|+++||++|++ .+|. |++|+
T Consensus 185 ~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T~~~Ei~~ql~-~~d~~v~vvVPv 259 (468)
T 4f4f_A 185 SGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVVYYFTAALSLG-APDRAVSFTVPT 259 (468)
T ss_dssp SCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHHHHHHHHHHTT-TTSSCEEEEEEC
T ss_pred cCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHHHHHHHHHhcc-cCCCCeEEEEEe
Confidence 975 55 66665 78999999988876531 4666766 46666 7899999999999995 6898 99999
Q ss_pred CCcccHHHHHHHHHhhCCCcEEEEEecCCCCccC----CCCC-----CCccccccCCCCCccCccc--------------
Q 023227 144 GTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHKIQGIGAGFVPGVLEV-------------- 200 (285)
Q Consensus 144 G~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~~~~-----~~~~~~gl~~~~~~~~~~~-------------- 200 (285)
|+||+++|++.+.+...|..|+|++ +++++++. .|+. ..+..++|.... |.++.+
T Consensus 260 G~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi~~-~sN~erl~~~l~~~d~~~~~ 337 (468)
T 4f4f_A 260 GNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDIQI-SSNFERLLFEAHGRDAAAVR 337 (468)
T ss_dssp SSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCCSS-CTTHHHHHHHHTTTCHHHHH
T ss_pred CCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhcCc-cchHHHHHHHHhccCHHHHH
Confidence 9999999999885544578899999 88887653 2322 223344554332 221110
Q ss_pred --------------------ccC--CeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCCEEEEEe
Q 023227 201 --------------------NII--DEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGKLIVVIF 258 (285)
Q Consensus 201 --------------------~~~--d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~~vv~i~ 258 (285)
... ...+.|+|+|+.++++.+++++|+++||+||+++++++++. .+++++|++.
T Consensus 338 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~Ava~aa~~~~~----~~~~~~V~l~ 413 (468)
T 4f4f_A 338 GLMQGLKQSGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHSAIGVKVAREKA----SGTAPMVVLA 413 (468)
T ss_dssp HHHHHHHHHSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHC----CSSSCEEEEE
T ss_pred HHHHHHHhcCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhHHHHHHHHHHHh----CCCCeEEEEe
Confidence 001 12789999999999999999999999999999999998873 2567889999
Q ss_pred cCCCCCCcch
Q 023227 259 PSFGERYLSS 268 (285)
Q Consensus 259 ~~gG~~~~~~ 268 (285)
|.+|.|+.+.
T Consensus 414 Ta~~~Kf~~~ 423 (468)
T 4f4f_A 414 TAHPAKFPDA 423 (468)
T ss_dssp CBCGGGSHHH
T ss_pred cCCccccHHH
Confidence 8999998765
No 41
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=2.4e-38 Score=295.21 Aligned_cols=261 Identities=13% Similarity=0.058 Sum_probs=194.7
Q ss_pred CCCCCCCchhHHHHHHHH---HHH-HcCC-----CCCCCeEEEeeCCChHHHHHHHHH--HHcCCeEEEEecCC-CCHHH
Q 023227 1 MMEPCSSVKDRIGYSMIS---DAE-AKGL-----ITPGESVLIEPTSGNTGIGLAFMA--AAKQYRLIITMPAS-MSLER 68 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~---~a~-~~g~-----~~~g~~~vv~~ssGN~g~a~A~~a--~~~G~~~~iv~p~~-~~~~~ 68 (285)
|+|||||||||++.+++. .++ ++|. ++++ .+|+++||||||.| |++| ++.|++++|++|++ +++.+
T Consensus 116 ~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~A-A~~a~a~~~Gi~~~I~~P~~~~S~~q 193 (514)
T 1kl7_A 116 FHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGSA-AIYGLRGKKDVSVFILYPTGRISPIQ 193 (514)
T ss_dssp CCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHHH-HHHHHTTCTTEEEEEEEETTSSCHHH
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHHH-HHHHHHhhcCCeEEEEEcCCCCCHHH
Confidence 689999999999998844 443 3452 3343 78999999999999 6666 89999999999997 89977
Q ss_pred HHHHH---HcCCEEEEeCCCCChHHHHHHHHHHHHhCC--CeEecCCCCCCCch--HhHHhchHHHHHhhh-C---CCCC
Q 023227 69 RIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTP--NAYMLQQFENPANP--KIHYETTGPELWKGS-G---GRID 137 (285)
Q Consensus 69 ~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~--~~g~~t~~~EI~~q~-~---~~~d 137 (285)
+.+|. .+|++++.+++ +|+++.+.+++++++.+ +.+.+ ++.|+.|+ +.||.+.++|+++|+ + +.+|
T Consensus 194 ~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~-~~~Ns~N~~ri~gQ~tyy~e~~~ql~~~~~~~~d 270 (514)
T 1kl7_A 194 EEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNV-GAVNSINWARILAQMTYYFYSFFQATNGKDSKKV 270 (514)
T ss_dssp HHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCB-CCCCSCCHHHHHHHHHHHHHHHHHHHSSSSCCCE
T ss_pred HHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhccccccccee-EeeCCCCHhHHhhHHHHHHHHHHHHhhhcCCCCc
Confidence 77773 45556666665 78999999999987742 11111 23344443 579999999999998 4 3589
Q ss_pred EEEEccCCcccHHHHHHHHHhhCCCcEEEEEecCCCCccC----CCCCC------CccccccCCCCCccCccc---ccCC
Q 023227 138 ALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKPG------PHKIQGIGAGFVPGVLEV---NIID 204 (285)
Q Consensus 138 ~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~~~~~------~~~~~gl~~~~~~~~~~~---~~~d 204 (285)
+||+|+|+||++.|++.+.+...|.+|+|+|++++ +++. .|... .+..++|... .|.++.+ ...|
T Consensus 271 ~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n-~~l~~~~~~G~~~~~~~~~~Tis~amdi~-~psn~er~l~~l~~ 348 (514)
T 1kl7_A 271 KFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN-DILDRFLKSGLYERSDKVAATLSPAMDIL-ISSNFERLLWYLAR 348 (514)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC-CHHHHHHHHSEEECCSSCCCCSCGGGCCS-SCTTHHHHHHHHHH
T ss_pred EEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCc-chHHHHHhcCCccCCCCCCCeechhhhcC-CCCcHHHHHHHHhc
Confidence 99999999999999987555546888999999998 4443 23211 2223343222 2433321 1112
Q ss_pred ------------------------------------------eEEEeCHHHHHHHHHHHHHhc----CCeeehhHHHHHH
Q 023227 205 ------------------------------------------EVVQVSSDEAIETAKLLALKE----GLFVGISSGGAAA 238 (285)
Q Consensus 205 ------------------------------------------~~~~v~d~e~~~a~~~l~~~~----gi~~~p~~g~a~a 238 (285)
.++.|+|+|+.++++.+++++ |+++||+||++++
T Consensus 349 ~~~~~~~~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e~~~ai~~l~~~~~~~~G~~~ep~tAv~~a 428 (514)
T 1kl7_A 349 EYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEETSETIKKIYESSVNPKHYILDPHTAVGVC 428 (514)
T ss_dssp HHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHCCSSTTCCCCHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHHHHHHHHHHHHhCCCCCCEEEcccHHHHHH
Confidence 489999999999999999999 9999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEEecCCCCCCcch
Q 023227 239 AAIEIAKRPENAGKLIVVIFPSFGERYLSS 268 (285)
Q Consensus 239 a~~~~~~~~~~~~~~vv~i~~~gG~~~~~~ 268 (285)
+++++.+++..+++++|++.|.+|.||.+.
T Consensus 429 a~~~~~~~g~~~~~~vV~l~Ta~~~Kf~~~ 458 (514)
T 1kl7_A 429 ATERLIAKDNDKSIQYISLSTAHPAKFADA 458 (514)
T ss_dssp HHHHHHHHHCCTTSEEEEEECBCGGGGHHH
T ss_pred HHHHHHHhccCCCCcEEEEECCchhhhHHH
Confidence 999988653235678999999999998765
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=1.8e-37 Score=286.05 Aligned_cols=253 Identities=13% Similarity=0.047 Sum_probs=194.5
Q ss_pred CCCCCCCchhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCC-CCHHHHHHHHH
Q 023227 1 MMEPCSSVKDRIGYSM---ISDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPAS-MSLERRIILRA 74 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~-~~G~~~~iv~p~~-~~~~~~~~~~~ 74 (285)
|+|||||||||++.++ +..+. ++|. ..+|+++||||||.|+|++++ +.|++++|++|++ ++..|+.+|+.
T Consensus 122 ~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~~s~~k~~qm~~ 197 (487)
T 3v7n_A 122 SNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEGVRVFMLSPHKKMSAFQTAQMYS 197 (487)
T ss_dssp CCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTTEEEEEEEETTCSCHHHHHHHHT
T ss_pred ccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccCCeEEEEECCCCCCHHHHHHHHh
Confidence 6899999999999998 77775 4554 256999999999999777776 8999999999997 99999999999
Q ss_pred cCC---EEEEeCCCCChHHHHHHHHHHHH------hCCCeEecCCCCCCCchHhHHhchHHHHHhhhC---CCCCEEEEc
Q 023227 75 FGA---ELVLTDPAKGMKGAVQKAEEILA------KTPNAYMLQQFENPANPKIHYETTGPELWKGSG---GRIDALVSG 142 (285)
Q Consensus 75 ~Ga---~v~~~~~~~~~~~~~~~a~~~~~------~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~---~~~d~iv~~ 142 (285)
+|+ +++.+++ +++++.+.++++.+ +. +.++++++ ||.. +.|+++.++|+..|+. +.+|+|++|
T Consensus 198 ~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~-~l~~vns~-Np~r-i~gQ~tyy~~~~~el~~~~~~~d~vvVP 272 (487)
T 3v7n_A 198 LQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQ-KIGTVNSI-NWAR-VVAQVVYYFKGYFAATRSNDERVSFTVP 272 (487)
T ss_dssp CCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHT-TEECCSTT-CHHH-HHHHHHHHHHHHHHTCSSTTCCEEEEEG
T ss_pred cCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhc-CeeeeCCC-CHHH-HHhHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 998 7777876 68899988888866 33 56777765 6666 7899988888888873 359999999
Q ss_pred cCCcccHHHHHHHHHhhCCCcEEEEEecCCCCccC----CCCC-----CCcc---ccccCCCCCccCcc---cc------
Q 023227 143 IGTGGTITGAGKFLKEKNPNIKLYGIEPTESPVLS----GGKP-----GPHK---IQGIGAGFVPGVLE---VN------ 201 (285)
Q Consensus 143 vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~~~----~~~~-----~~~~---~~gl~~~~~~~~~~---~~------ 201 (285)
+|+||+++|++.+.+...|.+|+|++++++ +++. .|+. ..+. ..+|.... |.++. ..
T Consensus 273 ~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l~~~~~~G~~~~~~~~~Ti~t~s~smdI~~-psn~er~l~~l~~~d~ 350 (487)
T 3v7n_A 273 SGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVLDEFFRTGAYRVRSAQDTYHTSSPSMDISK-ASNFERFVFDLLGRDP 350 (487)
T ss_dssp GGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHHHHHHHHSEEEC-------------------CHHHHHHHHHHTTTCH
T ss_pred cCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHHHHHHHcCCcccCCCCCccccCCchhccCC-CccHHHHHHHHhCCCH
Confidence 999999999998866656878999999998 4432 2322 1122 33433221 21110 00
Q ss_pred -----------------------------cCCeEEEeCHHHHHHHHHHHHHhcCCeeehhHHHHHHHHHHHHhcCCCCCC
Q 023227 202 -----------------------------IIDEVVQVSSDEAIETAKLLALKEGLFVGISSGGAAAAAIEIAKRPENAGK 252 (285)
Q Consensus 202 -----------------------------~~d~~~~v~d~e~~~a~~~l~~~~gi~~~p~~g~a~aa~~~~~~~~~~~~~ 252 (285)
.....+.|+|+|+.++++.+++++|+++||+||++++++.++.+ ++.
T Consensus 351 ~~~~~~m~~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dPhtAva~aaa~~~~~----~~~ 426 (487)
T 3v7n_A 351 ARVVQLFRDVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDTHTADGLKVAREHLR----PGV 426 (487)
T ss_dssp HHHHHHHHHHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHTTSCC----TTS
T ss_pred HHHHHHHHHHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEEChhHHHHHHHHHHhhC----CCC
Confidence 01135789999999999999999999999999999999887542 466
Q ss_pred EEEEEecCCCCCCcch
Q 023227 253 LIVVIFPSFGERYLSS 268 (285)
Q Consensus 253 ~vv~i~~~gG~~~~~~ 268 (285)
++|++.|.+|.|+.+.
T Consensus 427 ~~V~l~Ta~p~Kf~~~ 442 (487)
T 3v7n_A 427 PMVVLETAQPIKFGES 442 (487)
T ss_dssp CEEEEECBCGGGGHHH
T ss_pred cEEEEecCCccccHHH
Confidence 7899998999998765
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.64 E-value=0.7 Score=34.53 Aligned_cols=97 Identities=21% Similarity=0.155 Sum_probs=67.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
+.++....|..|..+|...+..|.+++++-.. +.+++.++..|..++.-+... .
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~---~~~~~~~~~~g~~~i~gd~~~--~--------------------- 61 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS---RTRVDELRERGVRAVLGNAAN--E--------------------- 61 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC---HHHHHHHHHTTCEEEESCTTS--H---------------------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHHcCCCEEECCCCC--H---------------------
Confidence 45777888999999999999999998888543 566777777888776555321 1
Q ss_pred CCCCCchHhHHhchHHHHHhhhC-CCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEe
Q 023227 111 FENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 169 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~-~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~ 169 (285)
|++++.+ ...|.++++++.-....-+...++..+|+.++++-.
T Consensus 62 ----------------~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 62 ----------------EIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp ----------------HHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred ----------------HHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1111111 236888888887655545666778888888887753
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=94.42 E-value=0.4 Score=38.14 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=58.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHH
Q 023227 1 MMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRII 71 (285)
Q Consensus 1 ~~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~-------p~--~~~~~~~~~ 71 (285)
|-+|.--+-+..+...+.+|.+.|. ...||.+++|.++..++-.. -|++.++|. |. ..+++..+.
T Consensus 20 F~~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~ 93 (201)
T 1vp8_A 20 FNKPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEE 93 (201)
T ss_dssp ESSCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHH
T ss_pred ecCCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHH
Confidence 3456666777788888888999886 24455556698887766643 688999887 32 557899999
Q ss_pred HHHcCCEEEEeCC
Q 023227 72 LRAFGAELVLTDP 84 (285)
Q Consensus 72 ~~~~Ga~v~~~~~ 84 (285)
++..|.+|+....
T Consensus 94 L~~~G~~V~t~tH 106 (201)
T 1vp8_A 94 LRKRGAKIVRQSH 106 (201)
T ss_dssp HHHTTCEEEECCC
T ss_pred HHhCCCEEEEEec
Confidence 9999999998775
No 45
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.81 E-value=1.1 Score=38.81 Aligned_cols=62 Identities=21% Similarity=0.160 Sum_probs=46.1
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 18 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 18 ~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
.++++...+++|...+|.+ +|..|.+++..|+..|.+++++.+ ++.+++.++.+|++.++..
T Consensus 156 ~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 156 YKGLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp HHHHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 3455667788886666654 577999999999999997655533 4678888999999765543
No 46
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.69 E-value=0.89 Score=39.30 Aligned_cols=61 Identities=23% Similarity=0.217 Sum_probs=46.4
Q ss_pred HHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEE
Q 023227 18 SDAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVL 81 (285)
Q Consensus 18 ~~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~Ga~v~~ 81 (285)
..++ +.+.+++|...+|++.+|.-|.+++..++..|.+++++.. ++.+++.+ +.+|++.++
T Consensus 138 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~ 200 (336)
T 4b7c_A 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAI 200 (336)
T ss_dssp HHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEE
Confidence 3444 6677888877777777799999999999999997666543 35677777 888886543
No 47
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.60 E-value=0.81 Score=39.44 Aligned_cols=58 Identities=28% Similarity=0.290 Sum_probs=45.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
+.+.+++|...+|.+.+|.-|.+++..++..|.+++++.+ ++.+++.++.+|++.++.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 191 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETID 191 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 4567888877777777899999999999999997666643 467888888899865543
No 48
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.32 E-value=1.5 Score=38.88 Aligned_cols=59 Identities=20% Similarity=0.242 Sum_probs=43.7
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+++...+++|...+|.+ +|.-|...+..|+.+|.+.++.+.. ++.|++.++.+|++++
T Consensus 176 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 176 HGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDL--NPARLAHAKAQGFEIA 234 (398)
T ss_dssp HHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcC--CHHHHHHHHHcCCcEE
Confidence 344556788886655554 6889999999999999964444433 4688899999999843
No 49
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.29 E-value=1.4 Score=38.12 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=45.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
+.+.+++|...+|++.+|.-|.+++..++..|.+++++.+ ++.+++.++.+|++.++..
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 3456788877677776899999999999999998666544 4678888899998765443
No 50
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.21 E-value=1.3 Score=38.40 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=45.5
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
.++ +...+++|...+|.+.+|.-|.+++..|+..|.+++++ .++.+++.++.+|++.
T Consensus 140 ~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 140 EGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp HHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 344 66778888776777768999999999999999976655 2467888899999987
No 51
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.20 E-value=0.97 Score=39.48 Aligned_cols=61 Identities=23% Similarity=0.145 Sum_probs=46.4
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.++ +...+++|...+|++.+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.++.
T Consensus 157 ~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~ 218 (353)
T 4dup_A 157 ANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGIN 218 (353)
T ss_dssp HHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEe
Confidence 344 5677888877777768899999999999999998665543 457788888899875543
No 52
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.16 E-value=0.8 Score=39.84 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=45.3
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++ +.+.+++|...+|.+.+|.-|.+++..|+..|.+++++... +.+++.++.+|++.++
T Consensus 149 ~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~ 209 (342)
T 4eye_A 149 FAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVL 209 (342)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEe
Confidence 344 56778888777777777999999999999999987766543 3456777778886554
No 53
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.12 E-value=1 Score=38.65 Aligned_cols=61 Identities=28% Similarity=0.339 Sum_probs=46.4
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 18 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 18 ~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
..+.+...+++|...+|.+.+|.-|.+++..|+.+|.+++++. +..+++.++.+|++.++-
T Consensus 142 ~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~ 202 (321)
T 3tqh_A 142 LQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCIN 202 (321)
T ss_dssp HHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEe
Confidence 3455677888986666655689999999999999999866553 345688889999975443
No 54
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.05 E-value=1.1 Score=39.29 Aligned_cols=60 Identities=25% Similarity=0.247 Sum_probs=45.6
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.++ +...+++|...+|.+ +|.-|.+++..|+.+|.+++++.+ ++.+++.++.+|++.++.
T Consensus 179 ~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 179 FALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGIN 239 (363)
T ss_dssp HHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEc
Confidence 444 567788886666665 888999999999999998666543 457888889999965544
No 55
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.34 E-value=1.9 Score=37.25 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=47.3
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 20 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 20 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.....+++|...+| ..+|--|...+..|+.+|...++++.. ++.|++.++.+||+.++...
T Consensus 152 ~~~~~~~~~g~~VlV-~GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k~~~a~~lGa~~~i~~~ 213 (346)
T 4a2c_A 152 AFHLAQGCENKNVII-IGAGTIGLLAIQCAVALGAKSVTAIDI--SSEKLALAKSFGAMQTFNSS 213 (346)
T ss_dssp HHHHTTCCTTSEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhccCCCCEEEE-ECCCCcchHHHHHHHHcCCcEEEEEec--hHHHHHHHHHcCCeEEEeCC
Confidence 455566778855455 456789999999999999998877654 46889999999997766554
No 56
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.93 E-value=1.1 Score=38.97 Aligned_cols=59 Identities=17% Similarity=0.228 Sum_probs=44.3
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 21 EAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 21 ~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.+...+++|...+|.+.+|.-|.+++..|+..|.+++++.... .+++.++.+|++.++.
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~ 195 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVID 195 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEE
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEe
Confidence 3567788887777777777999999999999999877665443 4566677788875543
No 57
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.57 E-value=1.7 Score=38.28 Aligned_cols=61 Identities=18% Similarity=0.167 Sum_probs=44.4
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.+.+...+++|...+|.+ +|..|.+++..|+.+|.+.++.+.. ++.+++.++.+|++.++.
T Consensus 173 ~~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 173 HGVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAGATTVILSTR--QATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CHHHHHHHHHHTCSEEEC
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHcCCCEEEC
Confidence 345556678886655655 5889999999999999955555433 467888889999975543
No 58
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.48 E-value=1 Score=39.72 Aligned_cols=53 Identities=25% Similarity=0.080 Sum_probs=40.9
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 27 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 27 ~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
++|...+|.+.+|..|.+++..|+.+|.+++++. ++.|++.++.+|++.++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~ 215 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY 215 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence 6676666666779999999999999999876654 3567888999999655433
No 59
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.33 E-value=2.6 Score=36.76 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=44.7
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++ +...+++|...+|++.+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 152 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 152 QLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF 212 (354)
T ss_dssp HHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence 344 4567788877777777899999999999999997665543 35677777888886543
No 60
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.09 E-value=3.3 Score=35.56 Aligned_cols=58 Identities=21% Similarity=0.225 Sum_probs=43.2
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
++. +...+++|...+|++.+|..|.+++..++..|.+++++.. ++.+++.++.+|++.
T Consensus 135 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~ 193 (333)
T 1v3u_A 135 FGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDA 193 (333)
T ss_dssp HHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSE
T ss_pred HHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcE
Confidence 344 5566788877788888899999999999999997665543 356667778888753
No 61
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.09 E-value=2.5 Score=36.97 Aligned_cols=57 Identities=23% Similarity=0.348 Sum_probs=43.4
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
+.+.+++|...+|++.+|.-|.+++..|+..|.+++++.+ ++.+++.++.+|++.++
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~ 213 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPI 213 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEE
Confidence 4466788866667666888999999999999997655543 35778888889986544
No 62
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.91 E-value=4.7 Score=31.17 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=62.2
Q ss_pred EEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
.++....|..|..+|...+.. |.+++++-+ ++.+.+.++..|.+++..+... .
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~~~--~--------------------- 94 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDATD--P--------------------- 94 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCTTC--H---------------------
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCCCC--H---------------------
Confidence 456667899999999999888 998887743 3566666777777655444210 0
Q ss_pred CCCCCchHhHHhchHHHHHhhh--CCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEE
Q 023227 111 FENPANPKIHYETTGPELWKGS--GGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 168 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~--~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv 168 (285)
|.+++. -...|.||++++.-....-+...++..+|..+++..
T Consensus 95 ----------------~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 95 ----------------DFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ----------------HHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ----------------HHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 111111 134788898888765555556677777777777654
No 63
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=89.84 E-value=1.6 Score=34.84 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=53.7
Q ss_pred CCCCCCchhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHH
Q 023227 2 MEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-------PA--SMSLERRIIL 72 (285)
Q Consensus 2 ~nptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~-------p~--~~~~~~~~~~ 72 (285)
-+|.--+-+..+...+.+|.+.|. ...||.+++|.++..++-.. -| +.++|. |. ..+++..+.+
T Consensus 29 ~~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L 101 (206)
T 1t57_A 29 EEPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDAL 101 (206)
T ss_dssp SSCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 355556667777888888998886 24445456688886666533 35 777776 22 4578999999
Q ss_pred HHcCCEEEEeCC
Q 023227 73 RAFGAELVLTDP 84 (285)
Q Consensus 73 ~~~Ga~v~~~~~ 84 (285)
+..|.+|+....
T Consensus 102 ~~~G~~V~t~tH 113 (206)
T 1t57_A 102 LERGVNVYAGSH 113 (206)
T ss_dssp HHHTCEEECCSC
T ss_pred HhCCCEEEEeec
Confidence 999999988764
No 64
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.83 E-value=1.7 Score=37.79 Aligned_cols=60 Identities=17% Similarity=0.099 Sum_probs=44.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
++.+...+++|...+|.+ +|.-|.+++..|+..|..-++.+.. ++.|++.++.+|++.++
T Consensus 157 ~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 157 HGAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGS--RKHCCDIALEYGATDII 216 (352)
T ss_dssp HHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECC--CHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECC--CHHHHHHHHHhCCceEE
Confidence 455667788886666664 6899999999999999843444333 46788889999996544
No 65
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.80 E-value=1.7 Score=37.99 Aligned_cols=63 Identities=16% Similarity=0.140 Sum_probs=45.6
Q ss_pred HHHHc-CCCCCC-CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 023227 19 DAEAK-GLITPG-ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~-g~~~~g-~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~ 81 (285)
.++.+ +.+++| ...+|.+.+|.-|..++..|+.+|.+++++...... ..+.+.++.+|++.++
T Consensus 156 ~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 156 LMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp HHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 34444 567888 776777777999999999999999988777755433 2345667889986543
No 66
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.77 E-value=2.7 Score=36.40 Aligned_cols=59 Identities=20% Similarity=0.226 Sum_probs=44.0
Q ss_pred HHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+..+ ..++++...+|++.+|..|.+++..++..|.+++++.+ ++.+++.++.+|++.+
T Consensus 156 ~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 34544 56788877778777799999999999999997666543 3567777778887543
No 67
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.52 E-value=3.6 Score=32.27 Aligned_cols=55 Identities=31% Similarity=0.470 Sum_probs=40.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
+...+++|...+|++.+|.-|.+++..++..|.+++++.. ++.+.+.++.+|++.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEY 86 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCE
Confidence 3456788866677776888999999999999987665543 345666667777643
No 68
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.51 E-value=2.6 Score=36.57 Aligned_cols=60 Identities=22% Similarity=0.193 Sum_probs=43.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++++..++++...+|++.+|.-|.+++..++.. |.+++++.+ ++.+++.++.+|++.+.
T Consensus 161 ~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 221 (347)
T 1jvb_A 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVI 221 (347)
T ss_dssp HHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEe
Confidence 3445566788877777777779999999999999 998555433 35677777888876443
No 69
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.48 E-value=0.71 Score=39.58 Aligned_cols=59 Identities=19% Similarity=0.067 Sum_probs=45.2
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 18 SDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 18 ~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++++...+++|...+|.+. |.-|.++...|+.+|.+++++. ++.|++.++.+|++.++
T Consensus 132 ~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 132 WQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 34567778888866666666 9999999999999999766664 23567778889997665
No 70
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.36 E-value=3 Score=37.41 Aligned_cols=96 Identities=17% Similarity=0.267 Sum_probs=63.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
.+|+.+..|..|..+|...+..|++++++-. ++.+++.++..|..++.-+... .
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~---d~~~v~~~~~~g~~vi~GDat~--~--------------------- 58 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDH---DPDHIETLRKFGMKVFYGDATR--M--------------------- 58 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEEC---CHHHHHHHHHTTCCCEESCTTC--H---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHhCCCeEEEcCCCC--H---------------------
Confidence 3577788999999999999999999888733 3567777788877766655421 1
Q ss_pred CCCCCchHhHHhchHHHHHhhhC-CCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEE
Q 023227 111 FENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 168 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~-~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv 168 (285)
|++++.+ ...|.||++++.-....-+...+|..+|+.+||+-
T Consensus 59 ----------------~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 59 ----------------DLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp ----------------HHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ----------------HHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 1122211 23566666666655555556666666676666664
No 71
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.34 E-value=3.5 Score=35.88 Aligned_cols=59 Identities=29% Similarity=0.328 Sum_probs=44.4
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.++ +...++++...+|++.+|.-|.+++..++..|.+++++.+ ++.+++.++.+|++.+
T Consensus 160 ~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~ 219 (351)
T 1yb5_A 160 RALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEV 219 (351)
T ss_dssp HHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEE
T ss_pred HHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEE
Confidence 344 3567788877777777899999999999999997665543 3567777888888644
No 72
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.31 E-value=3.4 Score=35.36 Aligned_cols=59 Identities=24% Similarity=0.144 Sum_probs=43.7
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.. ...++++...+|++.+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 130 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~ 189 (327)
T 1qor_A 130 YLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQV 189 (327)
T ss_dssp HHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 3443 567788877777777899999999999999997666543 3566777777887543
No 73
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.18 E-value=3.9 Score=35.66 Aligned_cols=60 Identities=22% Similarity=0.171 Sum_probs=43.4
Q ss_pred HHHHHc--CCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 18 SDAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 18 ~~a~~~--g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
..+..+ ..+++|...+|.+. |.-|..++..|+.+ |.+++++.+ ++.|++.++.+|++.++
T Consensus 174 ~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 236 (359)
T 1h2b_A 174 YRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVV 236 (359)
T ss_dssp HHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEE
Confidence 344555 67788866555555 88999999999999 997554433 46788888999996544
No 74
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.97 E-value=1.9 Score=37.68 Aligned_cols=60 Identities=25% Similarity=0.309 Sum_probs=46.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~ 81 (285)
+.+.+++|...+|.+.+|.-|..+...|+.+|.+.++++..... ..+++.++.+|++.++
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 44678888666666667999999999999999998888765443 4567788899996544
No 75
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.95 E-value=1.4 Score=38.21 Aligned_cols=59 Identities=14% Similarity=0.043 Sum_probs=42.7
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++++..+++|.+.+|. .+|.-|.+++..|+.+|.+++++... +.+++.++.+|++.++
T Consensus 167 ~~l~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVA-GFGGLGSMAVKYAVAMGAEVSVFARN---EHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHHTTCCTTCEEEEE-SCSHHHHHHHHHHHHTTCEEEEECSS---STTHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHhcCCCeec
Confidence 34455567888665565 45999999999999999976655433 3566778889997665
No 76
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=88.94 E-value=2.2 Score=37.59 Aligned_cols=52 Identities=25% Similarity=0.302 Sum_probs=39.5
Q ss_pred CCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 29 GESVLIEP-TSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 29 g~~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
|.+.+|.. .+|..|.+++..|+.+|.+++++.. ++.|++.++.+|++.++..
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEET
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeC
Confidence 33556653 7888999999999999998666643 5688899999999755443
No 77
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.93 E-value=4.6 Score=34.94 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=43.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.++..+++|...+|++.+|.-|.+++..++..|.+++++.+. +.+++.++.+|++.+
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~ 218 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVF 218 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceE
Confidence 44555567788777888888999999999999999976665443 234566777887543
No 78
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.81 E-value=3.5 Score=35.40 Aligned_cols=59 Identities=22% Similarity=0.219 Sum_probs=43.3
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.++. .+.++++...+|++.+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~ 194 (333)
T 1wly_A 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHT 194 (333)
T ss_dssp HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEE
Confidence 3443 567788877777777788999999999999987666543 3566777777887643
No 79
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.81 E-value=1.6 Score=39.42 Aligned_cols=120 Identities=16% Similarity=0.150 Sum_probs=71.6
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
..+++|...+|.+.+|.-|.+++..|+..|.+++++.. ++.+++.++.+|++.++.....+ ..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i~~~~~~--------------~~ 278 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVINRAELG--------------IT 278 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEEEHHHHT--------------CC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEeccccc--------------cc
Confidence 66788877677777799999999999999998877763 57888899999996543221000 00
Q ss_pred CeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEE
Q 023227 104 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 168 (285)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv 168 (285)
. +.. +++.........+..++.+..+..+|.+|-++|+- .+-..++...+.-+++-+
T Consensus 279 ~--~~~--~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 279 D--DIA--DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp T--TGG--GCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEES
T ss_pred c--ccc--ccccccchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEE
Confidence 0 000 00000011112233444444444589999998862 234455555566566655
No 80
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.72 E-value=4.7 Score=35.00 Aligned_cols=56 Identities=21% Similarity=0.337 Sum_probs=42.3
Q ss_pred HcCCCCCC--CeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH-cCCEEE
Q 023227 22 AKGLITPG--ESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRA-FGAELV 80 (285)
Q Consensus 22 ~~g~~~~g--~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~-~Ga~v~ 80 (285)
+.+.+++| ...+|++.+|.-|.+++..++..|. +++++.. ++.+++.++. +|++.+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~ 211 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAA 211 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceE
Confidence 55677888 7788888889999999999999999 7665543 3466676765 887543
No 81
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.60 E-value=3.4 Score=36.11 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=42.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
+...+++|...+|.+ +|.-|.+++..|+.+|.+.++.+.. ++.+++.++.+|++.++.
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 184 NALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDI--VESRLELAKQLGATHVIN 241 (371)
T ss_dssp TTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEES--CHHHHHHHHHHTCSEEEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC--CHHHHHHHHHcCCCEEec
Confidence 566778886666655 6889999999999999854444332 467888889999865443
No 82
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.57 E-value=1.8 Score=39.19 Aligned_cols=57 Identities=30% Similarity=0.313 Sum_probs=46.1
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..+++|...+|.+.+|..|.+.+..|+..|.+++++.. ++.|++.++.+|++.++..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 56788866666666799999999999999998877763 5788999999999765544
No 83
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=88.38 E-value=2.1 Score=37.13 Aligned_cols=50 Identities=20% Similarity=0.280 Sum_probs=37.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..||++.+|.-|.+++..|+.+|.+++++.+. +.+++.++.+|++.++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~~Ga~~~~~~ 216 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR---DEQIALLKDIGAAHVLNE 216 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESC---GGGHHHHHHHTCSEEEET
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCCEEEEC
Confidence 45666688999999999999999977666543 356777888998755543
No 84
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.01 E-value=4.5 Score=35.91 Aligned_cols=56 Identities=27% Similarity=0.391 Sum_probs=41.6
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
+.+++|...+|.+ +|.-|.+++..|+.+|..-++.+.. ++.|++.++.+|++.++-
T Consensus 209 ~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 209 GGIRPGDNVVILG-GGPIGLAAVAILKHAGASKVILSEP--SEVRRNLAKELGADHVID 264 (404)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CHHHHHHHHHHTCSEEEC
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHcCCCEEEc
Confidence 3678886655655 5899999999999999954444433 468888999999976543
No 85
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=87.76 E-value=4 Score=35.30 Aligned_cols=57 Identities=35% Similarity=0.415 Sum_probs=42.3
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.++..+ +|.+.+|.+. |.-|.+++..|+..|. +++++.+ ++.+++.++.+|++.+
T Consensus 159 ~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~ 216 (348)
T 2d8a_A 159 DTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYV 216 (348)
T ss_dssp HHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEE
T ss_pred HHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEE
Confidence 44556667 7866666666 9999999999999998 6655533 3677888888998644
No 86
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.43 E-value=4.1 Score=35.30 Aligned_cols=58 Identities=22% Similarity=0.259 Sum_probs=42.4
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 20 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 20 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
+.+...+++|...+|.+ +|.-|.+++..|+.+|.++ +.+.. ++.+++.++.+|++.++
T Consensus 160 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~V-i~~~~--~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFV-VCTAR--SPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEE-EEEES--CHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEE-EEEcC--CHHHHHHHHHhCCCEEE
Confidence 44555677886666665 5889999999999999984 44332 46788888999996443
No 87
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=87.42 E-value=3.1 Score=34.68 Aligned_cols=73 Identities=7% Similarity=-0.029 Sum_probs=52.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
+..|||.+++--|+++|..-.+.|.+++++-........++.++..|.++..+.-+ .+.++..+...+..+++
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 36789998888999999999999999988877665566677777778766655432 23444555555655554
No 88
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.32 E-value=2.5 Score=37.27 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=44.3
Q ss_pred HHHHcCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~-~~~g~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.+.++.. +++|...+|.+ +|.-|.+++..|+.+|. +++++.+ ++.+++.++.+|++.++
T Consensus 185 ~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 4455566 78886666666 89999999999999994 7666543 35788888999996544
No 89
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.15 E-value=5 Score=35.50 Aligned_cols=58 Identities=24% Similarity=0.208 Sum_probs=42.6
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.+...+++|.+.+|.+ +|.-|..++..|+.+|. +++++.+ ++.+++.++.+|++++
T Consensus 176 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 176 HGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred HHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence 345566788886655555 58899999999999998 5554433 4678888999999743
No 90
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.14 E-value=5.3 Score=34.36 Aligned_cols=59 Identities=20% Similarity=0.195 Sum_probs=43.2
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEE
Q 023227 19 DAE-AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV 80 (285)
Q Consensus 19 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~Ga~v~ 80 (285)
.+. +...+++|...+|++.+|.-|.+++..++..|.+++++.. ++.+++.++ .+|++.+
T Consensus 145 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~ 205 (345)
T 2j3h_A 145 AGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDA 205 (345)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEE
T ss_pred HHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceE
Confidence 344 4566788877777777799999999999999987655543 356777776 6887543
No 91
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.07 E-value=3.7 Score=35.97 Aligned_cols=53 Identities=23% Similarity=0.248 Sum_probs=40.7
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 26 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 26 ~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
+++|...+|.+.+|.-|.+++..|+..|.+++++. . +.+++.++.+|++.++-
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~---~~~~~~~~~lGa~~v~~ 233 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-S---QDASELVRKLGADDVID 233 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-C---GGGHHHHHHTTCSEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-C---hHHHHHHHHcCCCEEEE
Confidence 77886667777689999999999999998765553 2 35677789999976543
No 92
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.92 E-value=1.4 Score=37.87 Aligned_cols=58 Identities=26% Similarity=0.316 Sum_probs=42.0
Q ss_pred HHcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 21 EAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 21 ~~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++..++++. +.+|.+.+|.-|.+++..|+.+|.+++++.+.. .+++.++.+|++.++
T Consensus 141 ~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 141 LEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA---AEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT---TCHHHHHHTTCSEEE
T ss_pred HhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCcEEE
Confidence 3445567764 666666679999999999999999866665542 456667889986543
No 93
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.60 E-value=3.4 Score=35.78 Aligned_cols=57 Identities=28% Similarity=0.275 Sum_probs=42.6
Q ss_pred HcCCCC------CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 22 AKGLIT------PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~------~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
+...++ +|...+|.+.+|.-|.+++..|+.+|.+++++.+ ++.+++.++.+|++.++
T Consensus 138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 200 (346)
T 3fbg_A 138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVL 200 (346)
T ss_dssp TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEE
T ss_pred HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 445555 6766667768899999999999999997555533 46788888889986544
No 94
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.58 E-value=5 Score=34.56 Aligned_cols=52 Identities=27% Similarity=0.243 Sum_probs=38.5
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 25 LITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 25 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+++|...+|.+. |.-|.+++..++..|.+++++.+ ++.+++.++.+|++.+
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~ 212 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLV 212 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEE
Confidence 4677766666666 66999999999999986555432 4677788888998643
No 95
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.05 E-value=3.4 Score=36.14 Aligned_cols=57 Identities=9% Similarity=0.125 Sum_probs=41.8
Q ss_pred cCCCC--C-------CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 23 KGLIT--P-------GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 23 ~g~~~--~-------g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
...++ + |...+|++. |.-|.+++..++..|.+++++.+......+++.++.+|++.+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred ccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 55566 6 766666666 999999999999999976666543223356777888898765
No 96
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.68 E-value=2.3 Score=36.06 Aligned_cols=54 Identities=28% Similarity=0.388 Sum_probs=40.6
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 23 KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 23 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+ +++|...+|.+.+|..|.+++..++..|.+++++.+. +.+++.++.+|++.+
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA 174 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence 56 7888777777777999999999999999976666543 345566677888643
No 97
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=85.67 E-value=2.5 Score=36.92 Aligned_cols=59 Identities=19% Similarity=0.161 Sum_probs=41.3
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++.+..+++|...+|.+. |.-|..++..|+.+|.+++++.+.. .+++.++.+|++.++
T Consensus 170 ~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~---~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 170 SPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS---RKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEE
T ss_pred HHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHcCCCEEE
Confidence 4444566788866666555 9999999999999999855554332 356667778886543
No 98
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.63 E-value=1.6 Score=37.55 Aligned_cols=57 Identities=23% Similarity=0.303 Sum_probs=41.5
Q ss_pred HHcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 21 EAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 21 ~~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.++..++++. +.+|.+.+|.-|.+++..|+..|.+++++.+.. .+++.++.+|++.+
T Consensus 142 ~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v 199 (330)
T 1tt7_A 142 LEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEV 199 (330)
T ss_dssp HHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEE
T ss_pred HHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEE
Confidence 3445567764 667777779999999999999999866665543 35666778898654
No 99
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=85.36 E-value=2.9 Score=36.38 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=36.5
Q ss_pred CeEEEeeCCChHHHHH-HHHH-HHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 30 ESVLIEPTSGNTGIGL-AFMA-AAKQYR-LIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~-A~~a-~~~G~~-~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.+|.+. |.-|..+ +..| +.+|.+ ++++.+......|++.++.+|++.+
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 56666665 8899999 9999 999998 6665544322236777889999765
No 100
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=84.99 E-value=5.3 Score=34.39 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=38.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 20 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 20 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+...+++|...+|. .+|.-|...+..++++ |.+++++-+ ++.|++..+.+|++.++-..
T Consensus 155 ~l~~~~~~~g~~VlV~-GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 155 AIKVSGVKPGDWQVIF-GAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp HHHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-
T ss_pred eecccCCCCCCEEEEE-cCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCC
Confidence 4455556788555555 4565666666666654 666665533 46788899999997765543
No 101
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=84.92 E-value=1.9 Score=36.90 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=41.6
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 22 AKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
++..++++. +.+|.+.+|..|.++...|+.+|.+++++.+. +.|++.++.+|++.++
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRIL 196 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEE
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 344455532 45666667999999999999999987776544 4577888889987554
No 102
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=84.86 E-value=17 Score=30.83 Aligned_cols=134 Identities=8% Similarity=0.058 Sum_probs=70.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--------------CC-----HHHHHHHHHcCC-EEEEeCCCCChH-
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MS-----LERRIILRAFGA-ELVLTDPAKGMK- 89 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~--------------~~-----~~~~~~~~~~Ga-~v~~~~~~~~~~- 89 (285)
+.|+...+.....+++-.+...++|++.+.... .+ ..-.+.+...|. +|.++..+..+.
T Consensus 74 ~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~ 153 (358)
T 3hut_A 74 VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGL 153 (358)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCCEEEEEEESSHHHH
T ss_pred EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCcHHHH
Confidence 566655566667777778888899987652110 01 112344445564 555553322222
Q ss_pred HHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEe
Q 023227 90 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 169 (285)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~ 169 (285)
+..+..++..++.+.........++. ..-+.....+|.+ ..||.||++ +.+..+.++.+.+++.+-++++++..
T Consensus 154 ~~~~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~l~~---~~~d~i~~~-~~~~~a~~~~~~~~~~g~~~p~~~~~ 227 (358)
T 3hut_A 154 SSAQAFRKAFELRGGAVVVNEEVPPG--NRRFDDVIDEIED---EAPQAIYLA-MAYEDAAPFLRALRARGSALPVYGSS 227 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECTT--CCCCHHHHHHHHH---HCCSEEEEE-SCHHHHHHHHHHHHHTTCCCCEEECG
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCCC--CccHHHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHcCCCCcEEecC
Confidence 33344455555542221100000000 0112222233322 258988876 45667889999999998888888765
Q ss_pred c
Q 023227 170 P 170 (285)
Q Consensus 170 ~ 170 (285)
.
T Consensus 228 ~ 228 (358)
T 3hut_A 228 A 228 (358)
T ss_dssp G
T ss_pred c
Confidence 3
No 103
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=84.52 E-value=7.5 Score=33.35 Aligned_cols=62 Identities=21% Similarity=0.098 Sum_probs=44.0
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
..|.+++|.+..+.+-.+|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 4455544434444455689999999999999999999999853 333334333 7798888776
No 104
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=84.52 E-value=18 Score=30.67 Aligned_cols=41 Identities=27% Similarity=0.447 Sum_probs=30.1
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
.+++++ .+.||+|||. +..++.|+..++++.+ .++.|+|.+
T Consensus 234 ~~ll~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 234 EMLLER-GAKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp HHHHHT-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HHHHcC-CCCCeEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 344443 3569999985 5667789999999986 367899886
No 105
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.02 E-value=5.3 Score=34.99 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=41.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
+...+++|...+|.+ .|.-|.+++..|+.+|..-++.+.. ++.|++.++.+|++.++
T Consensus 187 ~~~~~~~g~~VlV~G-aG~vG~~a~q~a~~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 187 NTAKVEPGSNVAIFG-LGTVGLAVAEGAKTAGASRIIGIDI--DSKKYETAKKFGVNEFV 243 (378)
T ss_dssp TTTCCCTTCCEEEEC-CSHHHHHHHHHHHHHTCSCEEEECS--CTTHHHHHHTTTCCEEE
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHcCCcEEE
Confidence 556788886666655 5889999999999999954444433 23567788999996543
No 106
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=83.10 E-value=4.3 Score=35.27 Aligned_cols=57 Identities=30% Similarity=0.356 Sum_probs=41.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 20 AEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 20 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+.+...+++|.+.+|.+ +|.-|.+++..|+.+|. +++++.+ ++.+++.++.+|++.+
T Consensus 163 al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~v 220 (356)
T 1pl8_A 163 ACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLV 220 (356)
T ss_dssp HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEE
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEE
Confidence 44555678886656655 68899999999999999 5444432 4678888899999643
No 107
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.64 E-value=4.4 Score=35.52 Aligned_cols=59 Identities=20% Similarity=0.156 Sum_probs=40.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.++++..+++|...+|.+ +|.-|..++..|+.+|.+++++.+. +.+++.++.+|++.++
T Consensus 185 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi~~~~~---~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTS---EAKREAAKALGADEVV 243 (369)
T ss_dssp HHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEE
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEEe
Confidence 344444577886656655 5789999999999999985554433 4566777889986543
No 108
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=82.46 E-value=5.6 Score=33.06 Aligned_cols=72 Identities=13% Similarity=0.053 Sum_probs=49.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||.+++--|+++|..-++.|.+++++-.... -....+.++..|.+++.+..+ .+.++..+..++..+++
T Consensus 9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899998888999999999999998776533211 123355678889888765532 34445555556666665
No 109
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.14 E-value=18 Score=29.43 Aligned_cols=71 Identities=13% Similarity=0.042 Sum_probs=48.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-.... .......++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 6789999999999999999999999777755422 234455677778888766532 2333444444555444
No 110
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=81.57 E-value=12 Score=30.51 Aligned_cols=70 Identities=10% Similarity=0.093 Sum_probs=46.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++.... .......++..|.++..+..+ .+.++..+..++..++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999877765443 344456666678777666532 2333333344444444
No 111
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=81.16 E-value=6.5 Score=34.47 Aligned_cols=65 Identities=23% Similarity=0.225 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 11 RIGYSMISDAEA-KGL-ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~-~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
|+..+.+..+.+ .|. --.| ++|+....||-|..+|..++.+|.+++ +...+ ..+.+..+.+|++.
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTA 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEE
Confidence 566677766554 343 1233 678888999999999999999999877 44432 22233334456543
No 112
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=81.14 E-value=9.4 Score=31.72 Aligned_cols=55 Identities=9% Similarity=-0.050 Sum_probs=40.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
...|||..+|--|.++|..-...|.+++++-...........++..|.++..+..
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEe
Confidence 3678999999999999999999999987776433223445566677888776643
No 113
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=81.13 E-value=15 Score=30.32 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=48.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+.+++..++
T Consensus 8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 87 (274)
T 3e03_A 8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDT 87 (274)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999988777654322 23445567778888776542 2334444555555554
Q ss_pred C
Q 023227 102 T 102 (285)
Q Consensus 102 ~ 102 (285)
.
T Consensus 88 ~ 88 (274)
T 3e03_A 88 F 88 (274)
T ss_dssp H
T ss_pred c
Confidence 3
No 114
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=80.46 E-value=9 Score=31.36 Aligned_cols=73 Identities=14% Similarity=0.061 Sum_probs=47.1
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 30 ESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 30 ~~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
...|||..+ |.-|.++|....+.|.+++++........+++.+.. +| ..++.++- .+.++..+..++..++.+
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDV-ADDAQIDALFASLKTHWD 91 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCC-CCHHHHHHHHHHHHHHcC
Confidence 367888866 789999999999999998887665444555555533 33 23344443 244455555666666653
No 115
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=80.44 E-value=11 Score=32.35 Aligned_cols=54 Identities=22% Similarity=0.270 Sum_probs=39.3
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 25 LITPGESVLIEPTSGNTGIGLAFMAAAK-QYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 25 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.+++|...+|.+ +|..|.++...|+.+ |.+++++.. ++.|++.++.+|++.++.
T Consensus 168 ~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 168 LLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREVGADAAVK 222 (345)
T ss_dssp GCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCCEEEc
Confidence 567775555554 588999999999998 565555432 468888999999976543
No 116
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=80.18 E-value=11 Score=31.33 Aligned_cols=70 Identities=17% Similarity=-0.025 Sum_probs=46.4
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL--VLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN--~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|+ -|.++|..-...|.+++++-... ...+++.++..+.++ +.++- .+.++..+..++..++.
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDV-ISDQEIKDLFVELGKVW 101 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCT-TCHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeec-CCHHHHHHHHHHHHHHc
Confidence 6788887777 99999999999999977776554 556666665544433 44443 24445555556666654
No 117
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=80.07 E-value=23 Score=29.00 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=26.9
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 185 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 185 DRPTALLTS--SHRITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 568999974 5667789999999986 367888885
No 118
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=79.76 E-value=24 Score=28.90 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=30.0
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCC-CcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP-NIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~-~~~vigv~ 169 (285)
.+++++- +.||+||+. +..++.|+..++++.+- ++.|+|.+
T Consensus 187 ~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d 228 (293)
T 3l6u_A 187 RQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGID 228 (293)
T ss_dssp HHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEec
Confidence 3444443 568999986 56677899999999875 77888885
No 119
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=79.66 E-value=7.5 Score=32.32 Aligned_cols=73 Identities=15% Similarity=0.014 Sum_probs=49.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
+..|||.+++--|+++|..-...|.++++.-.... -....+.++..|.+++.+..+ .+.++..+..++..+++
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 36889998888999999999999998766532211 123356677889888877643 23444555556666665
No 120
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=79.51 E-value=23 Score=28.57 Aligned_cols=42 Identities=24% Similarity=0.252 Sum_probs=30.7
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC---CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN---PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~---~~~~vigv~ 169 (285)
.+++++-+..||+||+. +...+.|+..++++.+ .++.|+|.+
T Consensus 171 ~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d 215 (272)
T 3o74_A 171 QQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFG 215 (272)
T ss_dssp HHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEES
T ss_pred HHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeC
Confidence 44444442269999986 5677889999999987 468888885
No 121
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.50 E-value=10 Score=31.54 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=47.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999887765432 233445667777766555432 23444445555555543
No 122
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=79.23 E-value=25 Score=28.85 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=27.4
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEec
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 170 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~~ 170 (285)
+.||+|||. +..++.|+..++++.+ .++.|+|.+-
T Consensus 187 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~d~ 225 (288)
T 3gv0_A 187 DRPDGIVSI--SGSSTIALVAGFEAAGVKIGEDVDIVSKQS 225 (288)
T ss_dssp SCCSEEEES--CHHHHHHHHHHHHTTTCCTTTSCEEEEEES
T ss_pred CCCcEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEEecC
Confidence 468999976 5667789999999886 3678888863
No 123
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=78.90 E-value=12 Score=31.97 Aligned_cols=60 Identities=23% Similarity=0.115 Sum_probs=44.6
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~~~Ga~v~~~~ 83 (285)
..|.++ | .+|+.... +|.+++++.+++++|++++++.|+.- ++.-++.++..|+++..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 149 EFGRID-G-LKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp HSSCSS-S-EEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCCC-C-eEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 456543 2 34555544 68999999999999999999999843 4445667788899887765
No 124
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=78.83 E-value=9 Score=32.97 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=42.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
+.|.++ |.+..+.+-.+|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 346543 323333333489999999999999999999999854 333334343 7899988776
No 125
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=78.75 E-value=19 Score=31.20 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=50.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHH
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILA 100 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~ 100 (285)
...|||..+|--|.++|......|.+++++-....+ ....+.++..|.++..+..+ .+.++..+..++..+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 367888888889999999999999998887655332 23456678889888776432 233444455555555
Q ss_pred hC
Q 023227 101 KT 102 (285)
Q Consensus 101 ~~ 102 (285)
+.
T Consensus 126 ~~ 127 (346)
T 3kvo_A 126 KF 127 (346)
T ss_dssp HH
T ss_pred Hc
Confidence 53
No 126
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=78.64 E-value=12 Score=30.43 Aligned_cols=74 Identities=11% Similarity=0.131 Sum_probs=49.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhCC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~-~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~~ 103 (285)
...|||..+|--|.++|..-...|.++++.... ... ...+..++..+.++..+..+ .+.++..+..++..++.+
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 367888888889999999999999998877633 222 33456677778776655432 244445555566666653
No 127
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=77.97 E-value=7.4 Score=33.96 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=39.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+...+++|.+.+|.+ +|.-|..++..|+.+|..-++.+.. ++.+++.++.+|++.+
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~v 240 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGT--HKDKFPKAIELGATEC 240 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC--CHHHHHHHHHcCCcEE
Confidence 456778886656655 6889999999999999843444332 3456777888998643
No 128
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=77.75 E-value=7.6 Score=33.45 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=37.3
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 25 LITPGESVLIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 25 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~--G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+ +|.+.+|.+. |.-|..++..|+.+ |.+++++.+ ++.+++.++.+|++.+
T Consensus 168 ~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v 220 (344)
T 2h6e_A 168 KF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISR---SKKHRDFALELGADYV 220 (344)
T ss_dssp TC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECS---CHHHHHHHHHHTCSEE
T ss_pred CC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeC---CHHHHHHHHHhCCCEE
Confidence 45 7756566555 88999999999999 987444422 4678888888998543
No 129
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=77.72 E-value=8.1 Score=32.49 Aligned_cols=70 Identities=21% Similarity=0.118 Sum_probs=42.2
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEE--eCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVL--TDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN--~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~Ga~v~~--~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|. -|+++|......|.+++++-........+..+ +..| ++.. ++- .+.++..+..++..++.
T Consensus 33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG-AFVAGHCDV-ADAASIDAVFETLEKKW 107 (293)
T ss_dssp EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT-CEEEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CceEEECCC-CCHHHHHHHHHHHHHhc
Confidence 6788888877 99999999999999977765442112233333 2333 3433 333 23444455556665554
No 130
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=77.70 E-value=7.8 Score=33.24 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=44.6
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPAS--MSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~-G~~~~iv~p~~--~~~~~~~~~~~~Ga~v~~~~ 83 (285)
+.|.++ | .+|+.... +|.+++++.+++++ |++++++.|+. .++.-++.++..|+++..+.
T Consensus 145 ~~g~l~-g-lkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 145 EIGRID-G-IKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp HHSCST-T-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCcC-C-CEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 446543 2 34444433 68999999999999 99999999984 45566677788899987765
No 131
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=77.38 E-value=17 Score=29.77 Aligned_cols=69 Identities=22% Similarity=0.210 Sum_probs=48.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.... . ..+.++..+...+.++-. +.++..+...+..++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-~-~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEH-A-SVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-H-HHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-H-HHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999877755432 2 245566678877777753 3444555556665654
No 132
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=77.24 E-value=14 Score=30.19 Aligned_cols=72 Identities=8% Similarity=0.095 Sum_probs=47.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++...+.. ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 67899988989999999999999998877554432 22345566677766554432 23444455555555554
No 133
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=77.18 E-value=33 Score=29.09 Aligned_cols=43 Identities=16% Similarity=0.211 Sum_probs=29.9
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEec
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 170 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~~ 170 (285)
..+++++- +.+|+||+. +...+.|+..++++.+ .++.|+|++-
T Consensus 196 ~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~ 242 (350)
T 3h75_A 196 AQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNS 242 (350)
T ss_dssp HHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESC
T ss_pred HHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCC
Confidence 34444443 458888875 5667779999999886 2588888863
No 134
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=77.17 E-value=7.7 Score=33.68 Aligned_cols=59 Identities=17% Similarity=0.047 Sum_probs=39.6
Q ss_pred HHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 023227 19 DAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 81 (285)
Q Consensus 19 ~a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~Ga~v~~ 81 (285)
.+.++..+. +|.+.+|.+ +|.-|..++..|+.+|.+++++.+. +.+++.++ .+|++.++
T Consensus 170 ~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 170 SPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred HHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 344444566 776666665 6889999999999999976555443 24555555 88886433
No 135
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.92 E-value=14 Score=30.32 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=47.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+...+..++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899988889999999999999997776543211 12234556677777665432 23444455556665654
No 136
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=76.80 E-value=9.2 Score=33.37 Aligned_cols=56 Identities=20% Similarity=0.197 Sum_probs=39.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+...+++|.+.+|.+ +|.-|.+++..|+.+|..-++.+.. ++.+++.++.+|++.+
T Consensus 189 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~v 244 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDI--NGEKFPKAKALGATDC 244 (376)
T ss_dssp TTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHhCCcEE
Confidence 556778886666655 6889999999999999843333332 3456777888998643
No 137
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=76.69 E-value=14 Score=29.92 Aligned_cols=71 Identities=14% Similarity=0.081 Sum_probs=45.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|.-|.++|..-...|.+++++-..... ....+.++..+.++..+..+ .+.++..+..++..++
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999997776543211 12244556678887766542 2333444444444444
No 138
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=76.60 E-value=9.5 Score=33.25 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=39.8
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+...+++|...+|.+ +|.-|..++..|+.+|..-++.+.. ++.+++.++.+|++.+
T Consensus 185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 240 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDI--NKDKFAKAKEVGATEC 240 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHhCCceE
Confidence 456778886666665 6889999999999999843443332 3456777788998543
No 139
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=76.50 E-value=18 Score=32.47 Aligned_cols=86 Identities=16% Similarity=0.027 Sum_probs=54.1
Q ss_pred HHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCH-------------HHHHHHHHcCCEEEE
Q 023227 17 ISDAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSL-------------ERRIILRAFGAELVL 81 (285)
Q Consensus 17 ~~~a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~-------------~~~~~~~~~Ga~v~~ 81 (285)
+....+++++. .+...|||.+++--|+|+|...+. .|.+++++-...... ...+.++..|.++..
T Consensus 48 i~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~ 127 (422)
T 3s8m_A 48 IAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKS 127 (422)
T ss_dssp HHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEE
Confidence 33444566663 344678888888899999999888 999988775432211 123566788987766
Q ss_pred eCCC-CChHHHHHHHHHHHHhC
Q 023227 82 TDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 82 ~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
+..+ .+.++..+...+..++.
T Consensus 128 i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 128 INGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp EESCTTSHHHHHHHHHHHHHHS
T ss_pred EEecCCCHHHHHHHHHHHHHHc
Confidence 5432 23334445555666665
No 140
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=76.47 E-value=30 Score=28.25 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=26.5
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.||+||+. +...+.|+..++++.+ .++.|+|.+
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 468999976 5667779999999886 357788885
No 141
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=76.45 E-value=10 Score=32.98 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=39.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+...+++|...+|.+ +|.-|.+++..|+.+|..-++.+.. ++.+++.++.+|++.+
T Consensus 186 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 241 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDL--NPDKFEKAKVFGATDF 241 (374)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCCEE
T ss_pred hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC--CHHHHHHHHHhCCceE
Confidence 456778886666655 6889999999999999843333332 3466777888998643
No 142
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=76.37 E-value=12 Score=31.37 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=47.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
...|||..+|--|.++|..-...|.+++++...... ......++..|.+++.+..+ .+.++..+..++..++.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999998777654321 22334456778877766432 23344444455555543
No 143
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=76.29 E-value=8 Score=33.70 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=41.1
Q ss_pred HcCCCC-----CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 22 AKGLIT-----PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 22 ~~g~~~-----~g~~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
+...++ +|...+|.+.+|.-|.+++..|+. .|.+++++.+ ++.+++.++.+|++.++
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi 222 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVI 222 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEE
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 445555 665555666689999999999998 4887666543 35788888999987554
No 144
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=76.20 E-value=10 Score=32.95 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=42.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIIL----RAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~----~~~Ga~v~~~~ 83 (285)
+.|.++ |.+..+++-.+|.+++++.+++++|++++++.|+.- ++.-++.+ +..|+.+..+.
T Consensus 173 ~~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 173 ETNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred HhCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 446543 324344444589999999999999999999999843 33333333 36788887776
No 145
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=76.13 E-value=14 Score=30.50 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=48.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67889988999999999999999998886654322 22345567788877766432 23344444555555543
No 146
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.09 E-value=14 Score=29.78 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=47.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++...... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998777654322 22344566678777655432 23344444555555554
No 147
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=75.87 E-value=21 Score=29.38 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=48.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|..-.+.|.++++....... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998887554432 22344567778877665432 23444455555555554
No 148
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=75.83 E-value=16 Score=31.04 Aligned_cols=72 Identities=18% Similarity=0.149 Sum_probs=48.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------CCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------SMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEI 98 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~-----------~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~ 98 (285)
..|||..+|--|.++|..-...|.+++++-.. .........++..|.++..+..+ .+.++..+...+.
T Consensus 29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 108 (322)
T 3qlj_A 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA 108 (322)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 67888888889999999999999988877432 11123455677789888877643 2334444445555
Q ss_pred HHhC
Q 023227 99 LAKT 102 (285)
Q Consensus 99 ~~~~ 102 (285)
.++.
T Consensus 109 ~~~~ 112 (322)
T 3qlj_A 109 VETF 112 (322)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5543
No 149
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=75.74 E-value=19 Score=29.55 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=48.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER----RIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++.....+..+ ...++..|.++..+..+ .+.++..+..++..++.
T Consensus 13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67888888889999999999999998887554333333 34456668888766532 23444455555555554
No 150
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=75.71 E-value=16 Score=30.08 Aligned_cols=73 Identities=18% Similarity=0.112 Sum_probs=45.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
...|||..+|--|.++|......|.+++++...... ......++..|.++..+..+ .+.++..+...+..++.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 367899999999999999999999997776543211 11233455667766555432 23333444445555544
No 151
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.63 E-value=14 Score=26.85 Aligned_cols=49 Identities=24% Similarity=0.248 Sum_probs=36.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
.++....|..|.++|......|.+++++-. ++.+.+.++..|.+++..+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd 56 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIAD 56 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECC
Confidence 455566799999999999999999887743 3566666666676655544
No 152
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=75.55 E-value=13 Score=32.03 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=42.5
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
..|.++ | .+|+.... +|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 161 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 161 NFGRLK-G-VKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp HHSCST-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred HhCCcC-C-cEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 446543 2 34444444 69999999999999999999999843 333334443 7899888776
No 153
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=75.24 E-value=20 Score=29.24 Aligned_cols=72 Identities=10% Similarity=-0.001 Sum_probs=45.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999987776543211 11233455567777655432 23333444445554443
No 154
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=75.19 E-value=26 Score=29.08 Aligned_cols=72 Identities=10% Similarity=0.102 Sum_probs=48.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--------LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--------~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++
T Consensus 11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 90 (285)
T 3sc4_A 11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQ 90 (285)
T ss_dssp EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67899988999999999999999988877654321 23455667778888776532 2334444455555554
Q ss_pred C
Q 023227 102 T 102 (285)
Q Consensus 102 ~ 102 (285)
.
T Consensus 91 ~ 91 (285)
T 3sc4_A 91 F 91 (285)
T ss_dssp H
T ss_pred c
Confidence 3
No 155
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=74.96 E-value=11 Score=32.84 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=38.5
Q ss_pred HHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEE
Q 023227 19 DAEAKGLIT-PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~Ga~v~ 80 (285)
.+.++..+. +|...+|.+ +|.-|.+++..|+.+|.+++++.+. +.+++.++ .+|++.+
T Consensus 177 ~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v 236 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSF 236 (366)
T ss_dssp HHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEE
T ss_pred HHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceE
Confidence 344444455 776666655 5889999999999999976655443 24455544 7888644
No 156
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=74.71 E-value=17 Score=30.06 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=44.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++...... ......++..|.++..+..+ .+.++..+...+..++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999987776543211 11234455567666554332 23334444445555554
No 157
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=74.58 E-value=35 Score=28.09 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=30.1
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
.+++++ ...||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 179 ~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 223 (294)
T 3qk7_A 179 SRLLAL-EVPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYD 223 (294)
T ss_dssp HHHHHS-SSCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEET
T ss_pred HHHHcC-CCCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeec
Confidence 344443 2569999986 5677789999999986 367898885
No 158
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=74.56 E-value=14 Score=32.08 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=39.1
Q ss_pred EEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 32 VLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 32 ~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
+|+.... .|.++++..+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 157 ~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 157 TLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 4444444 59999999999999999999999843 333334343 8899988876
No 159
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=74.56 E-value=14 Score=30.35 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=47.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
...|||..+|--|.++|......|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 367888888999999999999999998887664322 22344566778777665432 2334444445555444
No 160
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=74.55 E-value=19 Score=29.57 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=47.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|.++++....+.. ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 67889999999999999999999998776554322 22344566778888776542 2333444444555444
No 161
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=74.52 E-value=39 Score=28.65 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=80.4
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--------------CCHH-----HHHHH-
Q 023227 13 GYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MSLE-----RRIIL- 72 (285)
Q Consensus 13 a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~--------------~~~~-----~~~~~- 72 (285)
+...+....+++. .+.|+-..+.....+++-.+...+++.+...... .+.. -.+.+
T Consensus 69 ~~~~~~~l~~~~~----v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~ 144 (366)
T 3td9_A 69 AANAAARAIDKEK----VLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAY 144 (366)
T ss_dssp HHHHHHHHHHTSC----CSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC----eEEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 3444555555542 2567766667778888888999999988664210 1111 12334
Q ss_pred HHcCC-EEEEe-CCCCChH-HHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH
Q 023227 73 RAFGA-ELVLT-DPAKGMK-GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI 149 (285)
Q Consensus 73 ~~~Ga-~v~~~-~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~ 149 (285)
+.+|. +|.++ .....+. ...+..++..++.+.......+. +. ..-+.....+|.+ ..||.||++ +++..+
T Consensus 145 ~~~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~-~~--~~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 217 (366)
T 3td9_A 145 KNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFR-SG--DQDFSAQLSVAMS---FNPDAIYIT-GYYPEI 217 (366)
T ss_dssp HTSCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEEC-TT--CCCCHHHHHHHHH---TCCSEEEEC-SCHHHH
T ss_pred HhcCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeC-CC--CccHHHHHHHHHh---cCCCEEEEc-cchhHH
Confidence 44575 55555 3222332 23334455555553322111111 10 0112222233322 358998885 567788
Q ss_pred HHHHHHHHhhCCCcEEEEEec
Q 023227 150 TGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 150 aGi~~~~k~~~~~~~vigv~~ 170 (285)
.++.+.+++.+.++++++...
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~ 238 (366)
T 3td9_A 218 ALISRQARQLGFTGYILAGDG 238 (366)
T ss_dssp HHHHHHHHHTTCCSEEEECGG
T ss_pred HHHHHHHHHcCCCceEEeeCC
Confidence 899999999988888887643
No 162
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=74.39 E-value=12 Score=30.69 Aligned_cols=72 Identities=11% Similarity=0.044 Sum_probs=46.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899988999999999988999997776543211 22344566778877665432 23334444445554443
No 163
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=74.38 E-value=16 Score=30.25 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=46.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899988999999999999999997776543211 12234556678887765432 23344444445554443
No 164
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=74.37 E-value=14 Score=31.61 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=42.4
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
+.|.++ | .+|+.... +|.++++..+++++|++++++.|+.- ++.-+..++ ..|+++..+.
T Consensus 142 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 142 RKGALR-G-LRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 446543 2 34554444 59999999999999999999999854 333333343 7898887776
No 165
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=74.03 E-value=11 Score=31.28 Aligned_cols=72 Identities=13% Similarity=0.049 Sum_probs=46.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHH----HHHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLE----RRIILRAFGAELVLTDPA-KGMKGAVQKAE 96 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---------~~~----~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 96 (285)
..|||..+|--|.++|..-...|.+++++-.... ... ....++..|.++..+..+ .+.++..+..+
T Consensus 12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 91 (281)
T 3s55_A 12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVA 91 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 6789998898999999999999999877654311 122 234456778877766432 23344444445
Q ss_pred HHHHhC
Q 023227 97 EILAKT 102 (285)
Q Consensus 97 ~~~~~~ 102 (285)
+..++.
T Consensus 92 ~~~~~~ 97 (281)
T 3s55_A 92 EAEDTL 97 (281)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 554443
No 166
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=73.99 E-value=16 Score=29.58 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=47.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67899989999999999999999998887654322 22344566778877665432 23344444455554543
No 167
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=73.95 E-value=13 Score=30.27 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=43.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS---LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~---~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-..... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 67899999999999999988899997776543221 12233455557666655432 2333333444444444
No 168
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=73.92 E-value=37 Score=28.07 Aligned_cols=34 Identities=9% Similarity=-0.055 Sum_probs=26.6
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
..||+|||. +..++.|+..++++.+ .++.|+|.+
T Consensus 201 ~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 201 HMPSVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 568999975 5667789999999886 357888885
No 169
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=73.83 E-value=10 Score=32.61 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=43.9
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM--SLERRIILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~-G~~~~iv~p~~~--~~~~~~~~~~~Ga~v~~~~ 83 (285)
+.|.++ | .+|+.... +|.+++++.+++++ |++++++.|+.- ++..++.++..|+++..+.
T Consensus 148 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 148 TQGRLD-N-LHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HHSCSS-S-CEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 446544 2 34544444 69999999999999 999999999843 4445577778898876655
No 170
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=73.75 E-value=14 Score=30.61 Aligned_cols=72 Identities=13% Similarity=0.080 Sum_probs=46.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 6788888899999999999999998665533211 112344556678887776543 23344455555555554
No 171
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.75 E-value=10 Score=33.07 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=39.4
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+...+++|.+.+|.+ +|.-|..++..|+.+|..-++.+.. ++.+++.++.+|++.+
T Consensus 184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~--~~~~~~~~~~lGa~~v 239 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI--NKDKFARAKEFGATEC 239 (373)
T ss_dssp TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHHTCSEE
T ss_pred hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHcCCceE
Confidence 456778886666655 6889999999999999843333332 3456777788898543
No 172
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=73.66 E-value=39 Score=28.34 Aligned_cols=146 Identities=10% Similarity=0.022 Sum_probs=79.0
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-------------CCH-----HHHHHHHH
Q 023227 14 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-------------MSL-----ERRIILRA 74 (285)
Q Consensus 14 ~~~~~~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-------------~~~-----~~~~~~~~ 74 (285)
...+....++ +. +.|+-..+.....+++-.+...+++++.+.... .+. .-.+.+..
T Consensus 58 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (362)
T 3snr_A 58 TTNARRFVTESKA-----DVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKK 132 (362)
T ss_dssp HHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCc-----eEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHh
Confidence 3344555555 44 667766666677777888889999988754210 011 12445566
Q ss_pred cCC-EEEEeCCCCCh-HHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHH
Q 023227 75 FGA-ELVLTDPAKGM-KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGA 152 (285)
Q Consensus 75 ~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi 152 (285)
+|. +|.++..+..+ .+..+..++..++.+..........+. ...+.....+|.+ ..||.||++ +.+..+.++
T Consensus 133 ~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~l~~---~~~dav~~~-~~~~~a~~~ 206 (362)
T 3snr_A 133 NNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFARP--DTSVAGQALKLVA---ANPDAILVG-ASGTAAALP 206 (362)
T ss_dssp TTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTT--CSCCHHHHHHHHH---HCCSEEEEE-CCHHHHHHH
T ss_pred cCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecCCC--CCCHHHHHHHHHh---cCCCEEEEe-cCcchHHHH
Confidence 775 55555432222 233444455555553221110000000 0111222223322 258998875 457778899
Q ss_pred HHHHHhhCCCcEEEEEec
Q 023227 153 GKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 153 ~~~~k~~~~~~~vigv~~ 170 (285)
.+.+++.+-+++++++..
T Consensus 207 ~~~~~~~g~~~p~i~~~g 224 (362)
T 3snr_A 207 QTTLRERGYNGLIYQTHG 224 (362)
T ss_dssp HHHHHHTTCCSEEEECGG
T ss_pred HHHHHHcCCCccEEeccC
Confidence 999999987778777643
No 173
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=73.65 E-value=19 Score=29.77 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=47.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899988999999999999999998777544321 22345566778877665432 23344444455555544
No 174
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=73.48 E-value=35 Score=27.66 Aligned_cols=34 Identities=6% Similarity=-0.122 Sum_probs=26.2
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 180 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d 217 (276)
T 3jy6_A 180 DQKTVAFAL--KERWLLEFFPNLIISGLIDNQTVTATGFA 217 (276)
T ss_dssp SSCEEEEES--SHHHHHHHSHHHHHSSSCCSSSEEEEEBC
T ss_pred CCCcEEEEe--CcHHHHHHHHHHHHcCCCCCCcEEEEEEC
Confidence 568999874 5677789999999886 357788875
No 175
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=73.27 E-value=17 Score=29.85 Aligned_cols=72 Identities=19% Similarity=0.128 Sum_probs=47.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....+.. ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999998777655432 23345566677766655432 23344444455554443
No 176
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=73.09 E-value=13 Score=30.79 Aligned_cols=72 Identities=15% Similarity=0.122 Sum_probs=47.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....+.. ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67888888889999999999999998877654322 22344566778877665432 23334444455555543
No 177
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=73.01 E-value=17 Score=29.73 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....+.. ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998886444322 12244556678777665432 23334444445554443
No 178
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=72.97 E-value=37 Score=27.95 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=26.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++-..
T Consensus 29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899988989999999988899987776543
No 179
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=72.93 E-value=20 Score=29.14 Aligned_cols=72 Identities=10% Similarity=0.069 Sum_probs=44.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999987776543211 11223445567666554332 23334444445555554
No 180
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=72.56 E-value=37 Score=27.60 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=74.0
Q ss_pred HHHHHHcCCCCCCCeEEEeeCCC-hHHHHHHHHHHHcCCeEEEEecCCCC--------HH-----HHHHHHH--cCC-EE
Q 023227 17 ISDAEAKGLITPGESVLIEPTSG-NTGIGLAFMAAAKQYRLIITMPASMS--------LE-----RRIILRA--FGA-EL 79 (285)
Q Consensus 17 ~~~a~~~g~~~~g~~~vv~~ssG-N~g~a~A~~a~~~G~~~~iv~p~~~~--------~~-----~~~~~~~--~Ga-~v 79 (285)
+..+..++. +.|+..... .........+...|+|++.+-..... .. -.+.+.. .|. +|
T Consensus 54 ~~~l~~~~v-----dgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~i 128 (291)
T 3l49_A 54 IQTLIAQKP-----DAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNV 128 (291)
T ss_dssp HHHHHHHCC-----SEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCC-----CEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCceE
Confidence 444445554 556654432 34444455566778887666322110 00 1223333 454 55
Q ss_pred EEeCCCCCh---HHHHHHHHHHHHhCCCeEecCCC-C--CCCchHhHHhchHHHHHhhhCC---CCCEEEEccCCcccHH
Q 023227 80 VLTDPAKGM---KGAVQKAEEILAKTPNAYMLQQF-E--NPANPKIHYETTGPELWKGSGG---RIDALVSGIGTGGTIT 150 (285)
Q Consensus 80 ~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~-~--~~~~~~~g~~t~~~EI~~q~~~---~~d~iv~~vG~Gg~~a 150 (285)
.++.+..+. .++.+-.++..++.++.-.+... . .......++ ....+++++- + .||+||+. +...+.
T Consensus 129 ~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~ai~~~--~d~~a~ 204 (291)
T 3l49_A 129 LVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAY-SNVTDMLTKY-PNEGDVGAIWAC--WDVPMI 204 (291)
T ss_dssp EEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHH-HHHHHHHHHC-CSTTSCCEEEES--SHHHHH
T ss_pred EEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHH-HHHHHHHHhC-CCcCCcCEEEEC--CCchHH
Confidence 556542222 12333344555555333322211 1 111212232 3444555554 4 69999875 567888
Q ss_pred HHHHHHHhhCC-CcEEEEEe
Q 023227 151 GAGKFLKEKNP-NIKLYGIE 169 (285)
Q Consensus 151 Gi~~~~k~~~~-~~~vigv~ 169 (285)
|+..++++.+- ++.|+|.+
T Consensus 205 g~~~al~~~g~~di~vvg~d 224 (291)
T 3l49_A 205 GATQALQAAGRTDIRTYGVD 224 (291)
T ss_dssp HHHHHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHHcCCCCeEEEEec
Confidence 99999999875 78888885
No 181
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=72.53 E-value=11 Score=31.29 Aligned_cols=72 Identities=15% Similarity=0.231 Sum_probs=47.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..+.. ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57889988989999999999999998877643322 22344566778877665432 23334444455554443
No 182
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=72.51 E-value=15 Score=30.85 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=44.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|.+++++-..... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 68899999999999999999999987776544211 12234456667776655432 2333444444555444
No 183
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=72.39 E-value=11 Score=30.16 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=40.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC-EEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA-ELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga-~v~~~~~ 84 (285)
+.+|++.+|.-|.+++......|.+++++.... .+...+...+. +++..+-
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 688999999999999999999999998887653 23445556688 8777764
No 184
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=72.26 E-value=20 Score=29.05 Aligned_cols=70 Identities=11% Similarity=0.111 Sum_probs=44.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|.-|.++|..-...|.+++++-... .......++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 9 LAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999877765432 122222556678776655432 2333333444444444
No 185
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=72.18 E-value=31 Score=28.02 Aligned_cols=71 Identities=11% Similarity=0.032 Sum_probs=43.6
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCC---EEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGA---ELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN--~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|. -|.++|..-...|.+++++-........+.. .+.++. .++.++-. +.++..+..++..++.
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQV 85 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHHh
Confidence 6788888877 9999999999999998777655333333333 344443 44445542 3344444555555543
No 186
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=72.09 E-value=14 Score=32.11 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=39.2
Q ss_pred EEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 32 VLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 32 ~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
+|+.... .|.++++..+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 157 ~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 157 SYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp EEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4444444 59999999999999999999999843 333334443 7899988876
No 187
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=72.06 E-value=14 Score=30.09 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=37.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ---YRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G---~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|......| .+++++.........+..+...+.++..+.
T Consensus 23 ~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~ 78 (267)
T 1sny_A 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILE 78 (267)
T ss_dssp EEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEE
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEE
Confidence 67899999999999999999999 888887765433334555544455555443
No 188
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=72.00 E-value=18 Score=25.03 Aligned_cols=50 Identities=16% Similarity=0.272 Sum_probs=34.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G-~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+|++. |..|.+++......| .+++++-+ ++.+...++..|.+++..+.
T Consensus 7 ~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d~ 57 (118)
T 3ic5_A 7 NICVVGA-GKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVDA 57 (118)
T ss_dssp EEEEECC-SHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECCT
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEecC
Confidence 4555655 999999999999999 66655543 34566666666766655543
No 189
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=71.90 E-value=26 Score=27.92 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=45.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.++++....+... .....++..|.++..+..+ .+.++..+..++..++.
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 578899999999999999999999988754443211 1123455567777665432 23333344444554544
No 190
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.58 E-value=13 Score=32.10 Aligned_cols=56 Identities=16% Similarity=0.197 Sum_probs=39.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G-~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
+.+.+++|...+|.+.+|..|.+++..|+..| .+++... +..+.+.++ +|++.++.
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 55778888666666677999999999999885 4444443 235666677 88865544
No 191
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=71.57 E-value=15 Score=30.56 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=45.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999997766543211 12344556667777665432 23334444445554443
No 192
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=71.57 E-value=9.4 Score=31.28 Aligned_cols=72 Identities=21% Similarity=0.237 Sum_probs=44.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67888888999999999999999997776443211 11233344567676655432 23344444455555543
No 193
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=71.55 E-value=30 Score=27.87 Aligned_cols=52 Identities=12% Similarity=0.196 Sum_probs=35.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHc--CCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAF--GAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~-~~iv~p~~~~~~~~~~~~~~--Ga~v~~~~ 83 (285)
..|||..+|--|.++|......|.+ ++++ ..+.....++.++.. +.++..+.
T Consensus 7 ~vlVtGas~gIG~~~a~~l~~~G~~~v~~~-~r~~~~~~~~~l~~~~~~~~~~~~~ 61 (254)
T 1sby_A 7 NVIFVAALGGIGLDTSRELVKRNLKNFVIL-DRVENPTALAELKAINPKVNITFHT 61 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCCSEEEEE-ESSCCHHHHHHHHHHCTTSEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCcEEEEE-ecCchHHHHHHHHHhCCCceEEEEE
Confidence 6788988899999999999999997 5554 333334445555444 55665443
No 194
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=71.45 E-value=14 Score=31.02 Aligned_cols=54 Identities=13% Similarity=0.026 Sum_probs=40.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|+.|.+++......|.+++++.+... ....+..++..|.+++..+-
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl 67 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL 67 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence 5789999999999999999889999988876543 33334445567777776653
No 195
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=71.35 E-value=9.2 Score=31.89 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=39.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CH-HHHH---HHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SL-ERRI---ILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~--~~-~~~~---~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|.-|.+++......|.+++++.+.. . .+ .+.. .++..|.+++..+-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 64 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence 578999999999999999888899988877653 1 12 3332 34456888877664
No 196
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=70.98 E-value=32 Score=27.54 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=39.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCCH-HHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-SMSL-ERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~-~~~~-~~~~~~~~~Ga~v~~~~~ 84 (285)
..|||..+|--|.++|..-...|.+++++... .... .....++..|.++..+..
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (258)
T 3afn_B 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64 (258)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence 67899999999999999999999998877655 3222 233455666877766543
No 197
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=70.94 E-value=57 Score=29.01 Aligned_cols=90 Identities=12% Similarity=-0.050 Sum_probs=56.3
Q ss_pred HHHHHHHHHcCCCCC-CCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCH-------------HHHHHHHHcCCE
Q 023227 14 YSMISDAEAKGLITP-GESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSL-------------ERRIILRAFGAE 78 (285)
Q Consensus 14 ~~~~~~a~~~g~~~~-g~~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~-------------~~~~~~~~~Ga~ 78 (285)
...+...+.++.+.. +...|||.+++--|+|+|...+. .|.+++++-...... ...+.++..|.+
T Consensus 31 ~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~ 110 (405)
T 3zu3_A 31 KKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY 110 (405)
T ss_dssp HHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc
Confidence 344555666676633 34578888888899999999888 999988765432211 123356778887
Q ss_pred EEEeCCC-CChHHHHHHHHHHHHhCC
Q 023227 79 LVLTDPA-KGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 79 v~~~~~~-~~~~~~~~~a~~~~~~~~ 103 (285)
++.+..+ .+.++..+...+..++.+
T Consensus 111 a~~i~~Dvtd~~~v~~~v~~i~~~~G 136 (405)
T 3zu3_A 111 AKSINGDAFSDEIKQLTIDAIKQDLG 136 (405)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHHTS
T ss_pred eEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 7655432 233444555566666663
No 198
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=70.87 E-value=10 Score=32.80 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=38.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcC
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFG 76 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~G 76 (285)
.+.+...+++|...+|.+ +|.-|.++...|+.+|.+.++.+.. ++.|++.++.++
T Consensus 170 ~~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~--~~~~~~~a~~l~ 224 (363)
T 3m6i_A 170 AGLQRAGVRLGDPVLICG-AGPIGLITMLCAKAAGACPLVITDI--DEGRLKFAKEIC 224 (363)
T ss_dssp HHHHHHTCCTTCCEEEEC-CSHHHHHHHHHHHHTTCCSEEEEES--CHHHHHHHHHHC
T ss_pred HHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHhc
Confidence 344556678886666655 4889999999999999984544433 456777777763
No 199
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=70.59 E-value=14 Score=30.74 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=45.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+...+..++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999988776543211 12233445567777655432 23344444455555543
No 200
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=70.57 E-value=20 Score=30.05 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=43.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|......|.+++++...... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999987776543211 11233455556555443321 23334444445555554
No 201
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=70.37 E-value=39 Score=26.92 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=38.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|.-|.++|......|.+++++...+... .....++..|.++..+.
T Consensus 7 ~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (247)
T 2hq1_A 7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEE
Confidence 678999999999999999999999887774433222 22345566677766554
No 202
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=70.30 E-value=28 Score=28.80 Aligned_cols=53 Identities=15% Similarity=0.061 Sum_probs=39.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|..-...|.+++++-... ........++..|.++..+.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 88 (275)
T 4imr_A 35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA 88 (275)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 678888889999999999999999987776543 23444556677787776654
No 203
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=69.91 E-value=22 Score=29.46 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=45.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|......|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999998777554321 12234566778777655432 2333333444444443
No 204
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=69.88 E-value=16 Score=32.08 Aligned_cols=60 Identities=27% Similarity=0.297 Sum_probs=42.3
Q ss_pred HcCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
+.|.++ | .+|+.... +|.+++++.+++++|++++++-|+.- ++.-+..++ ..|+++..+.
T Consensus 170 ~~g~l~-g-l~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 170 NFGKLQ-G-LTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HHSCCT-T-CEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-eEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 346543 2 34544444 59999999999999999999999843 333334343 7898888776
No 205
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=69.86 E-value=21 Score=28.84 Aligned_cols=71 Identities=13% Similarity=0.080 Sum_probs=43.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|.-|.++|......|.+++++-..... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999987776544211 12234455667666554432 2333333334444333
No 206
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=69.82 E-value=21 Score=29.12 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=45.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|.-|.++|..-...|.+++++...+... .....++..|.++..+..+ .+.++..+..++..++.
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999987776533211 1234456668777655432 23333333344444443
No 207
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=69.66 E-value=18 Score=30.23 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++..... .......++..|.++..+..+ .+.++..+..++..++.
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 6789998898999999999999999777644321 112234456778888877643 23333444445554443
No 208
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=69.63 E-value=45 Score=27.29 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=27.9
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEec
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 170 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~~ 170 (285)
+.||+||+. +..++.|+..++++.+ .++.|+|.+-
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~ 222 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDD 222 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 569999986 5667789999999886 3688999864
No 209
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=69.62 E-value=22 Score=28.79 Aligned_cols=71 Identities=11% Similarity=0.158 Sum_probs=44.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++...+.+. ...+.++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999989999987776522211 1233455667777665432 2333333444444443
No 210
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=69.62 E-value=18 Score=29.18 Aligned_cols=71 Identities=10% Similarity=0.156 Sum_probs=44.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++...+... ...+.++..|.++..+..+ .+.++..+..++..++
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999988776533211 1233455567766554332 2333334444444444
No 211
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=69.27 E-value=25 Score=28.85 Aligned_cols=69 Identities=9% Similarity=-0.032 Sum_probs=47.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||.+++--|+++|..-...|.++++.-. +..+...+...+.++..+..+ .+.++..+..++..+++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789998888999999999999999877633 355666666667666554432 23444555555555554
No 212
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=69.23 E-value=23 Score=28.59 Aligned_cols=71 Identities=18% Similarity=0.086 Sum_probs=43.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|.-|+++|..-...|.+++++-..... ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 67999999999999999999999987776543211 11223445567766554332 2333333444444443
No 213
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=69.20 E-value=25 Score=28.68 Aligned_cols=71 Identities=15% Similarity=0.069 Sum_probs=45.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+...+..++
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 67888888989999999999999997766443211 12244556678887766532 2333444444444444
No 214
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=69.13 E-value=19 Score=29.42 Aligned_cols=71 Identities=14% Similarity=0.165 Sum_probs=43.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-...... .....++..|.++..+..+ .+.++..+...+..++
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999977765432111 1123445557666554322 2333334444444444
No 215
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=68.88 E-value=14 Score=30.65 Aligned_cols=73 Identities=16% Similarity=0.090 Sum_probs=44.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
...|||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 367899999999999999988889988774432111 11233455567776655432 23333444445554444
No 216
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=68.86 E-value=16 Score=32.58 Aligned_cols=73 Identities=19% Similarity=0.003 Sum_probs=48.1
Q ss_pred CeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCH-------------HHHHHHHHcCCEEEEeCCCCChHH-HHHH
Q 023227 30 ESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSL-------------ERRIILRAFGAELVLTDPAKGMKG-AVQK 94 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~-~~G~~~~iv~p~~~~~-------------~~~~~~~~~Ga~v~~~~~~~~~~~-~~~~ 94 (285)
.+.||+..|+-.|+|.|.+.+ ..|-.++++..+..+. ...+.++..|.+.+.+..+-.-++ ..+.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 378999988889999988866 6798888776543221 234677888988877765332233 4444
Q ss_pred HHHHHHhC
Q 023227 95 AEEILAKT 102 (285)
Q Consensus 95 a~~~~~~~ 102 (285)
..+..++.
T Consensus 131 i~~i~~~~ 138 (401)
T 4ggo_A 131 IEEAKKKG 138 (401)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 45555554
No 217
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=68.68 E-value=24 Score=29.16 Aligned_cols=71 Identities=15% Similarity=0.121 Sum_probs=44.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC---EEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGA---ELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga---~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-..... ....+.++..|. ++..+..+ .+.++..+..++..++
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999997776543211 223445566665 66655432 2333444444555444
No 218
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=68.66 E-value=20 Score=29.03 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=34.3
Q ss_pred eEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMS-LERRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~ 82 (285)
..|||..+|--|.++|..-.. .|.+++++...... ......++..|.++..+
T Consensus 6 ~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 59 (276)
T 1wma_A 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 59 (276)
T ss_dssp EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEE
Confidence 678999999999999999888 89987776553211 12233445556544433
No 219
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=68.53 E-value=47 Score=27.15 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=42.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE--EEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL--VLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-......... .+.+|.++ +.++- .+.++..+..++..++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA--AASVGRGAVHHVVDL-TNEVSVRALIDFTIDTF 83 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH--HHHHCTTCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--HHHhCCCeEEEECCC-CCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999987775554333322 23335444 44443 23344444445554443
No 220
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=68.18 E-value=26 Score=32.31 Aligned_cols=59 Identities=14% Similarity=0.001 Sum_probs=43.9
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCC---------------CHHHHHHHHHcCCEEEEeCC
Q 023227 26 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM-PASM---------------SLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 26 ~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~-p~~~---------------~~~~~~~~~~~Ga~v~~~~~ 84 (285)
++++...|||..+|--|.++|..-...|.+.++++ ..+. ....+..++..|+++..+.-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 322 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTC 322 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEEC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEEC
Confidence 45666788999999999999998888899877766 4432 13446667888998877654
No 221
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=68.17 E-value=21 Score=30.82 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=41.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIIL----RAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~----~~~Ga~v~~~~ 83 (285)
..|.++ |.+..+.+-.+|.+++++.+++++|++++++.|+.- ++.-++.+ +..|+.+..+.
T Consensus 151 ~~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 151 NFGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 446543 324334444489999999999999999999999853 33333333 45788887776
No 222
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=67.90 E-value=18 Score=30.35 Aligned_cols=72 Identities=10% Similarity=0.130 Sum_probs=46.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHH----HHHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLE----RRIILRAFGAELVLTDPA-KGMKGAVQKAE 96 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~---------~~~~----~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 96 (285)
..|||..+|--|.++|..-...|.+++++-... .... ....++..|.++..+..+ .+.++..+..+
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 109 (299)
T 3t7c_A 30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD 109 (299)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 678999888899999999999999988775431 1122 244567778877665432 23344444455
Q ss_pred HHHHhC
Q 023227 97 EILAKT 102 (285)
Q Consensus 97 ~~~~~~ 102 (285)
+..++.
T Consensus 110 ~~~~~~ 115 (299)
T 3t7c_A 110 DGVTQL 115 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 554443
No 223
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=67.85 E-value=47 Score=26.86 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=20.7
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhCC----CcEEEEE
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGI 168 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~~----~~~vigv 168 (285)
+.||+||+. +..++.|+..++++.+- ++.|+|.
T Consensus 176 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~ 212 (277)
T 3cs3_A 176 TEPVDVFAF--NDEMAIGVYKYVAETNYQMGKDIRIIGF 212 (277)
T ss_dssp CSSEEEEES--SHHHHHHHHHHHTTSSCCBTTTEEEECS
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 357777764 45666778888877652 3455554
No 224
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=67.74 E-value=17 Score=29.97 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=46.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDPA-KGMKGAVQKAE 96 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 96 (285)
..|||..+|--|.++|..-...|.+++++-... ....+ ...++..|.++..+..+ .+.++..+..+
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 94 (278)
T 3sx2_A 15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQ 94 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 678999999999999999999999987765431 11222 33456678777765432 23344444455
Q ss_pred HHHHhC
Q 023227 97 EILAKT 102 (285)
Q Consensus 97 ~~~~~~ 102 (285)
+..++.
T Consensus 95 ~~~~~~ 100 (278)
T 3sx2_A 95 AGLDEL 100 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 555543
No 225
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=67.73 E-value=14 Score=31.64 Aligned_cols=54 Identities=22% Similarity=0.102 Sum_probs=40.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHH---HHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSLERRI---ILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~~~~~---~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|..|.+++......|.+++++.+.. ..+.+.. .++..|.+++..+-
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl 69 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec
Confidence 578999999999999999999999999888754 3344433 44556777776654
No 226
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=67.68 E-value=56 Score=27.66 Aligned_cols=119 Identities=20% Similarity=0.169 Sum_probs=68.2
Q ss_pred EEeeCCChHHHHHHHHHHHcC----CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQ----YRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 108 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G----~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 108 (285)
|..-..||.|.++|..-.+.| .+++++-+ +....+.+.++.+|.++ .. +.. +..++- +..++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r-~~~~~~~~~l~~~G~~~--~~---~~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP-DMDLATVSALRKMGVKL--TP---HNK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS-CTTSHHHHHHHHHTCEE--ES---CHH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECC-CccHHHHHHHHHcCCEE--eC---ChH-------HHhccC-CEEEE
Confidence 555678999999999988999 56665533 32213556666788764 22 111 222333 45554
Q ss_pred CCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEecCCC
Q 023227 109 QQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 173 (285)
Q Consensus 109 ~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~ 173 (285)
.-- | .....+..+|...+ .++.+|+.+.+|-...-+...+....+..+++..-|..+
T Consensus 91 av~--~----~~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p 147 (322)
T 2izz_A 91 AVK--P----HIIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTP 147 (322)
T ss_dssp CSC--G----GGHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGG
T ss_pred EeC--H----HHHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcH
Confidence 221 1 12233333443333 357788888777666555556655545668888766443
No 227
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=67.64 E-value=28 Score=31.39 Aligned_cols=73 Identities=8% Similarity=0.094 Sum_probs=48.2
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 29 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 29 g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
+...|||..+|--|.++|..-...|.+++++-............+..+.+++.++-. +.++..+...+..++.
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 346788888888999999998888998666544332333344556778888888753 3334444555555554
No 228
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=67.22 E-value=22 Score=29.82 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=45.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~G-a~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
...|||..+|--|.++|..-...|.+++++-..... ......++..| .++..+..+ .+.++..+..++..++.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 367888888999999999999999988877654322 23344555555 455544321 23344444455554543
No 229
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=67.19 E-value=46 Score=26.52 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=25.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
..|||..+|--|.++|..-...|.+++++-.
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence 6788888898999999998888888666543
No 230
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=66.74 E-value=39 Score=27.68 Aligned_cols=71 Identities=11% Similarity=-0.030 Sum_probs=45.0
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+ |--|.++|......|.+++++-........++.++. .| ..++.++- .+.++..+..++..++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV-SKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 67888876 789999999999999998777655433445555543 34 34444453 23444445555555555
No 231
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=66.70 E-value=24 Score=29.47 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=46.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~~ 103 (285)
..|||.+++--|+++|..-...|.++++.-.. ..++ +..+.+|.+++.+..+ .+.++..+..++..++++
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 67999988889999999999999987766433 2333 3346667766554322 344555555666666653
No 232
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=66.58 E-value=46 Score=26.64 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=40.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~~~~~Ga~v~~~~~ 84 (285)
..|||..+|--|.++|..-...|.+++++...+.. ......++..+.++..+..
T Consensus 9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (255)
T 3icc_A 9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64 (255)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEec
Confidence 67888888889999999999999988886555433 2335566778888876653
No 233
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=66.33 E-value=20 Score=30.66 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=37.8
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCE
Q 023227 19 DAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQY-RLIITMPASMSLERRIILRAFGAE 78 (285)
Q Consensus 19 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~-~~~iv~p~~~~~~~~~~~~~~Ga~ 78 (285)
.+.. ...+ +|.+.+|.+. |.-|.+++..|+..|. +++++.+ ++.+++.++.+ ++
T Consensus 155 ~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~ 210 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-AD 210 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CS
T ss_pred HHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HH
Confidence 3444 5667 7766666666 8899999999999998 6665543 35666666666 54
No 234
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=66.04 E-value=31 Score=31.36 Aligned_cols=59 Identities=22% Similarity=0.190 Sum_probs=41.5
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-----HHHHHHHHHcCCEEEEeCC
Q 023227 26 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 26 ~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-----~~~~~~~~~~Ga~v~~~~~ 84 (285)
++++...|||..+|.-|.++|......|.+.++++..+.+ ......++..|+++..+..
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 286 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAAC 286 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEe
Confidence 4556678999999999999999988889974444433221 2334567788998876654
No 235
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=65.95 E-value=18 Score=29.74 Aligned_cols=72 Identities=19% Similarity=0.180 Sum_probs=43.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHH-cCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRA-FGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~-~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-...... .....++. .|.++..+..+ .+.++..+..++..++.
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 678888889999999999999999977665432111 11223333 57776655432 23334444445554443
No 236
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=65.93 E-value=20 Score=29.56 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=46.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---------SLER----RIILRAFGAELVLTDPA-KGMKGAVQKAE 96 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---------~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 96 (285)
..|||..+|--|.++|..-...|.+++++-.... ...+ ...++..|.++..+..+ .+.++..+..+
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 91 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA 91 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 6789999999999999999999999877654311 1222 33456678777665432 23344444555
Q ss_pred HHHHhC
Q 023227 97 EILAKT 102 (285)
Q Consensus 97 ~~~~~~ 102 (285)
+..++.
T Consensus 92 ~~~~~~ 97 (287)
T 3pxx_A 92 NAVAEF 97 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 555543
No 237
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=65.87 E-value=19 Score=31.61 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHcCCeEEEEecC-CC--CHHHHHHH----HHcCCEEEEeC
Q 023227 40 NTGIGLAFMAAAKQYRLIITMPA-SM--SLERRIIL----RAFGAELVLTD 83 (285)
Q Consensus 40 N~g~a~A~~a~~~G~~~~iv~p~-~~--~~~~~~~~----~~~Ga~v~~~~ 83 (285)
|.+++++.+++++|++++++.|+ .- ++.-++.+ +..|+.+..+.
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999998 43 33334333 37788888776
No 238
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=65.81 E-value=21 Score=28.65 Aligned_cols=53 Identities=9% Similarity=0.092 Sum_probs=36.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus 13 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 66 (255)
T 1fmc_A 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR 66 (255)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEE
Confidence 67899999999999999998999987776543211 112344555677666554
No 239
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=65.69 E-value=20 Score=29.33 Aligned_cols=72 Identities=13% Similarity=0.089 Sum_probs=43.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~G-a~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..| .++..+..+ .+.++..+..++..++.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 67888888889999999999999987776543211 12234455555 455544322 23344444445554543
No 240
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=65.63 E-value=16 Score=30.44 Aligned_cols=72 Identities=13% Similarity=0.045 Sum_probs=44.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++..+..+ .+.++..+...+..++.
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67889888889999999999999986654332111 11233444567777776543 23334444445554443
No 241
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=65.59 E-value=40 Score=25.24 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=38.6
Q ss_pred EecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCE
Q 023227 59 TMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDA 138 (285)
Q Consensus 59 v~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~ 138 (285)
++...........+...|++|++...............+..++.+..+..-+.+-..........+..++.++. +. |.
T Consensus 23 ~~s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dV 100 (157)
T 3gxh_A 23 LSSGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DV 100 (157)
T ss_dssp EEEBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CE
T ss_pred eEcCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CE
Confidence 33334455666677778888777643211111000011222333233332233211110133444555555556 44 88
Q ss_pred EEEccCC
Q 023227 139 LVSGIGT 145 (285)
Q Consensus 139 iv~~vG~ 145 (285)
+|-+.|+
T Consensus 101 LVnnAgg 107 (157)
T 3gxh_A 101 LVHCLAN 107 (157)
T ss_dssp EEECSBS
T ss_pred EEECCCC
Confidence 8888865
No 242
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=65.58 E-value=20 Score=29.65 Aligned_cols=72 Identities=13% Similarity=0.045 Sum_probs=45.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC----------CCCHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA----------SMSLER----RIILRAFGAELVLTDPA-KGMKGAVQKA 95 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~----------~~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a 95 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+..+ ...++..|.++..+..+ .+.++..+..
T Consensus 17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 96 (280)
T 3pgx_A 17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV 96 (280)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence 67899999999999999999999998877542 112333 33456667777665432 2334444444
Q ss_pred HHHHHhC
Q 023227 96 EEILAKT 102 (285)
Q Consensus 96 ~~~~~~~ 102 (285)
++..++.
T Consensus 97 ~~~~~~~ 103 (280)
T 3pgx_A 97 ADGMEQF 103 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 5554443
No 243
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.54 E-value=48 Score=26.09 Aligned_cols=49 Identities=18% Similarity=0.144 Sum_probs=34.5
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCC
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDP 84 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~Ga~v~~~~~ 84 (285)
++....|+.|..+|......|.+++++-. ++.+.+.+ +.+|.+++.-+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 44555799999999999999999888743 34555554 346777655554
No 244
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=65.51 E-value=49 Score=26.60 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=44.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|.-|.++|..-...|.+++++....... ..++.+ +.++.++..+..+ .+.++..+..++..++.
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999888776543332 222233 3346666554332 23334444455555554
No 245
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=65.21 E-value=13 Score=30.30 Aligned_cols=52 Identities=8% Similarity=-0.007 Sum_probs=37.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
..|||..+|--|.++|......|.+++++-...........++..|.+++.+
T Consensus 3 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 54 (254)
T 1zmt_A 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM 54 (254)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE
Confidence 4688988888999999999999998776654433333333356667777666
No 246
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=65.16 E-value=30 Score=28.39 Aligned_cols=72 Identities=13% Similarity=-0.035 Sum_probs=44.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++-..... ......++..|.++..+..+ .+.++..+..++..++.
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999987776543211 11233445567766554322 23334444445554443
No 247
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=65.05 E-value=11 Score=30.92 Aligned_cols=25 Identities=12% Similarity=0.194 Sum_probs=22.9
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecC
Q 023227 38 SGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 38 sGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
||-.|.++|.++...|.+++++-..
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 8999999999999999999988754
No 248
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=65.02 E-value=23 Score=29.17 Aligned_cols=53 Identities=15% Similarity=0.060 Sum_probs=42.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
+..|||.+++--|+++|..-...|.++++.-. +......+.++..|.++..+.
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~g~~~~~~~ 62 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAAR-RAPDETLDIIAKDGGNASALL 62 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCCHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeC-CcHHHHHHHHHHhCCcEEEEE
Confidence 37889998888999999999999999877643 445677888899998877654
No 249
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=64.79 E-value=35 Score=27.67 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=47.4
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIIL-RAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+ +--|.++|......|.+++++....... ..++.+ +.+|.++..+..+ .+.++..+..++..++.
T Consensus 22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 67888877 6799999999999999988876654433 333444 3558777766542 23444555556665654
No 250
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=64.78 E-value=27 Score=28.81 Aligned_cols=71 Identities=17% Similarity=0.125 Sum_probs=41.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++-...... .....++..| ++..+..+ .+.++..+..++..++.
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 678999999999999999999999877664331111 1122333345 55555432 23333344445554544
No 251
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=64.61 E-value=63 Score=27.12 Aligned_cols=133 Identities=8% Similarity=0.044 Sum_probs=68.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC---------------CCCHH-----HHH-HHHHcCC-EEEEeCCCCCh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA---------------SMSLE-----RRI-ILRAFGA-ELVLTDPAKGM 88 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~---------------~~~~~-----~~~-~~~~~Ga-~v~~~~~~~~~ 88 (285)
+.|+-..+.....+++-.+...+++++..... ..+.. -.+ .++.+|. +|.++..+..+
T Consensus 71 ~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~iaii~~~~~~ 150 (356)
T 3ipc_A 71 KFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPY 150 (356)
T ss_dssp CEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCTTCCEEEEECSSHH
T ss_pred cEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcCCCEEEEEeCCChH
Confidence 56666666667777777888889987653211 01111 122 2344465 45444432222
Q ss_pred H-HHHHHHHHHHHhCCCeE-ecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEE
Q 023227 89 K-GAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLY 166 (285)
Q Consensus 89 ~-~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vi 166 (285)
. ...+..++..++.+... ....+ .+. ...+.....+|.+ ..||.||++ +++..+.++.+.+++.+-+++++
T Consensus 151 ~~~~~~~~~~~l~~~g~~v~~~~~~-~~~--~~d~~~~~~~l~~---~~~d~v~~~-~~~~~a~~~~~~~~~~g~~~~~~ 223 (356)
T 3ipc_A 151 GQGLADETKKAANAAGVTEVMYEGV-NVG--DKDFSALISKMKE---AGVSIIYWG-GLHTEAGLIIRQAADQGLKAKLV 223 (356)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEC-CTT--CCCCHHHHHHHHH---TTCCEEEEE-SCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEEee-CCC--CCCHHHHHHHHHh---cCCCEEEEc-cCchHHHHHHHHHHHCCCCCcEE
Confidence 2 23333444445542211 00011 000 0112222223322 358988865 46677789999999998888888
Q ss_pred EEec
Q 023227 167 GIEP 170 (285)
Q Consensus 167 gv~~ 170 (285)
+...
T Consensus 224 ~~~~ 227 (356)
T 3ipc_A 224 SGDG 227 (356)
T ss_dssp ECGG
T ss_pred Eecc
Confidence 7653
No 252
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=64.56 E-value=34 Score=31.42 Aligned_cols=59 Identities=27% Similarity=0.224 Sum_probs=41.9
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---C--HHHHHHHHHcCCEEEEeCC
Q 023227 26 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---S--LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 26 ~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---~--~~~~~~~~~~Ga~v~~~~~ 84 (285)
++++...|||..+|--|.++|......|.+.++++..+. + ......++..|+++..+..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 319 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAAC 319 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEe
Confidence 455667899999999999999998889996444443322 1 2345667788998877643
No 253
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=64.53 E-value=62 Score=27.07 Aligned_cols=42 Identities=17% Similarity=0.130 Sum_probs=29.2
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-CCcEEEEEe
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 169 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-~~~~vigv~ 169 (285)
..+++++ .+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 225 ~~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~g~~di~vvg~D 267 (342)
T 1jx6_A 225 AKASLAK-HPDVDFIYAC--STDVALGAVDALAELGREDIMINGWG 267 (342)
T ss_dssp HHHHHHH-CCCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred HHHHHHh-CCCccEEEEC--CChhHHHHHHHHHHcCCCCcEEEEeC
Confidence 3455554 3568999975 5667889999998876 356666653
No 254
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=64.48 E-value=37 Score=27.35 Aligned_cols=70 Identities=16% Similarity=0.093 Sum_probs=43.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++-... ....+..+.+|.++..+..+ .+.++..+..++..++.
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAADGATVIVSDINA--EGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH--HHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 678999889999999999999999877653321 22223334557777766542 23334444445554443
No 255
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=64.45 E-value=29 Score=28.17 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=36.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|......|.+++++-..... ......++..|.++..+.
T Consensus 16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 69 (260)
T 2zat_A 16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 67899999999999999999999987776543211 112334555676665443
No 256
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=64.31 E-value=21 Score=29.55 Aligned_cols=72 Identities=8% Similarity=0.083 Sum_probs=45.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-------------CCCHHHH----HHHHHcCCEEEEeCCC-CChHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-------------SMSLERR----IILRAFGAELVLTDPA-KGMKGAV 92 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~-------------~~~~~~~----~~~~~~Ga~v~~~~~~-~~~~~~~ 92 (285)
..|||..+|--|.++|..-...|.+++++-.. .....++ ..++..|.++..+..+ .+.++..
T Consensus 13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 92 (286)
T 3uve_A 13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALK 92 (286)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH
Confidence 67899999999999999999999998876432 1123333 3445567777665432 2344444
Q ss_pred HHHHHHHHhC
Q 023227 93 QKAEEILAKT 102 (285)
Q Consensus 93 ~~a~~~~~~~ 102 (285)
+..++..++.
T Consensus 93 ~~~~~~~~~~ 102 (286)
T 3uve_A 93 AAVDSGVEQL 102 (286)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4455555543
No 257
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=64.28 E-value=31 Score=27.98 Aligned_cols=70 Identities=13% Similarity=0.017 Sum_probs=43.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILA 100 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~ 100 (285)
..|||..+|--|.++|..-...|.+++++...... ......++..|.++..+..+ .+.++..+...+..+
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR 78 (260)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999987776543211 11233445557777665432 233333344444433
No 258
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=64.00 E-value=48 Score=29.94 Aligned_cols=51 Identities=12% Similarity=-0.164 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 10 DRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 10 ~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
-||..+.+..+.+........++|+....||-|..+|.....+|.+++.+-
T Consensus 215 g~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 367777777766543334445689999999999999999999999988764
No 259
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=63.61 E-value=30 Score=30.04 Aligned_cols=54 Identities=13% Similarity=0.210 Sum_probs=38.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~----~~~~Ga~v~~~~~ 84 (285)
+..+.+-.+|.+++++.+++++|++++++.|+.- ++.-++. .+..|+.+..+..
T Consensus 177 kva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 236 (339)
T 4a8t_A 177 KVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 236 (339)
T ss_dssp EEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECC
Confidence 3334444489999999999999999999999853 3333332 3567888877763
No 260
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=63.53 E-value=25 Score=29.35 Aligned_cols=71 Identities=14% Similarity=0.060 Sum_probs=42.3
Q ss_pred eEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCC-EEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGA-ELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssG--N~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+| --|+++|..-...|.+++++-........+..+ +..|. ..+.++- .+.++..+..++..++.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDV-SDAESVDNMFKVLAEEW 106 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 578888775 689999999889999987776553333333333 33343 3344443 23444445555555553
No 261
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=63.51 E-value=34 Score=28.30 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=42.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAF-GAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~-Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++....... .....++.. |.++..+..+ .+.++..+..++..++.
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 678999999999999999999999877765442111 112223222 6666555432 23334444445554444
No 262
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=63.49 E-value=25 Score=28.92 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=46.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------CCHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS----------MSLER----RIILRAFGAELVLTDPA-KGMKGAVQKA 95 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~----------~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a 95 (285)
..|||..+|--|.++|..-...|.+++++-... .+..+ ...++..|.++..+..+ .+.++..+..
T Consensus 13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 92 (277)
T 3tsc_A 13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVV 92 (277)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 678999888899999999999999988774421 12222 33456667777665432 2444444555
Q ss_pred HHHHHhC
Q 023227 96 EEILAKT 102 (285)
Q Consensus 96 ~~~~~~~ 102 (285)
++..++.
T Consensus 93 ~~~~~~~ 99 (277)
T 3tsc_A 93 DDGVAAL 99 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 5555543
No 263
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=63.46 E-value=22 Score=30.18 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=46.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCC-CChHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---------MSLER----RIILRAFGAELVLTDPA-KGMKGAVQKAE 96 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~ 96 (285)
..|||..+|--|.++|..-...|.+++++-... ....+ ...++..|.++..+..+ .+.++..+..+
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 127 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD 127 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 678899889999999999999999988874321 11222 34456678877765432 23344444455
Q ss_pred HHHHhC
Q 023227 97 EILAKT 102 (285)
Q Consensus 97 ~~~~~~ 102 (285)
+..++.
T Consensus 128 ~~~~~~ 133 (317)
T 3oec_A 128 EALAEF 133 (317)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 554443
No 264
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=63.29 E-value=20 Score=29.64 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=43.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE--eCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVL--TDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~--~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-..... ......++..|.++.. ++- .+.++..+..++..++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-NDATAVDALVESTLKEF 103 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-CCHHHHHHHHHHHHHHc
Confidence 67888888889999999999999988776553211 1223445556655544 443 23344444445554443
No 265
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=63.09 E-value=48 Score=26.77 Aligned_cols=70 Identities=11% Similarity=0.037 Sum_probs=38.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-........ ..+.++.++..+..+ .+.++..+..++..++.
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEE--PAAELGAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998777554322211 223345555544322 23344444445554443
No 266
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=62.98 E-value=62 Score=26.49 Aligned_cols=42 Identities=14% Similarity=-0.012 Sum_probs=29.9
Q ss_pred HHHHhhhC--CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 126 PELWKGSG--GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~--~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
.+++++.. ..||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 181 ~~~l~~~~~~~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 181 QNLHTRLKDPNIKQAIISL--DAMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp HHHHHHHTCTTSCEEEEES--SHHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred HHHHhhcccCCCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 34444442 268998874 6677889999999986 357888885
No 267
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=62.74 E-value=56 Score=25.91 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=42.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHH-cCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRA-FGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~-~~~~~~-~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++........+ ...++. .|.++..+..+ .+.++..+..++..++.
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 67899999999999999988999987777553211111 122222 46666554432 23333344445554444
No 268
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=62.54 E-value=33 Score=27.51 Aligned_cols=32 Identities=6% Similarity=0.119 Sum_probs=27.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|......|.+++++-..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 67899999999999999999999987776543
No 269
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=62.52 E-value=40 Score=28.54 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=44.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC--EEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA--ELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~Ga--~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|......|.+++++....... .....++..|. ++..+..+ .+.++..+...+..++.
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 678999888899999999999999977776543211 22334444554 45444321 23344445555555555
No 270
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=62.51 E-value=85 Score=27.94 Aligned_cols=83 Identities=10% Similarity=-0.080 Sum_probs=47.9
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHH--HHHHHHHcCCeEEEEecCCCC-------------HHHHHHHHHcCCEEEEeCC
Q 023227 20 AEAKGLITPGESVLIEPTSGNTGIG--LAFMAAAKQYRLIITMPASMS-------------LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 20 a~~~g~~~~g~~~vv~~ssGN~g~a--~A~~a~~~G~~~~iv~p~~~~-------------~~~~~~~~~~Ga~v~~~~~ 84 (285)
...++.+..+...|||.+++--|++ +|.+.+..|.+++++-..... ....+.++..|.++..+..
T Consensus 51 ~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (418)
T 4eue_A 51 CKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIE 130 (418)
T ss_dssp HHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred HhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEe
Confidence 3345555555567888877778888 444444449888776543221 2223345778877765543
Q ss_pred C-CChHHHHHHHHHHHHhC
Q 023227 85 A-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 85 ~-~~~~~~~~~a~~~~~~~ 102 (285)
+ .+.++..+..++..++.
T Consensus 131 Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 131 DAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp CTTCHHHHHHHHHHHHHTT
T ss_pred eCCCHHHHHHHHHHHHHHc
Confidence 2 23344455556666665
No 271
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=62.33 E-value=60 Score=26.15 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=51.4
Q ss_pred HHHHcCC-EEEEeCCCCC-hHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCccc
Q 023227 71 ILRAFGA-ELVLTDPAKG-MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 148 (285)
Q Consensus 71 ~~~~~Ga-~v~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~ 148 (285)
.+...|. +|.++.+... ..++.+-.++..++.+-...............++. ...+++++- +.||+||+. +..+
T Consensus 112 ~L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~~ai~~~--~d~~ 187 (280)
T 3gyb_A 112 HLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYT-ETLALLKEH-PEVTAIFSS--NDIT 187 (280)
T ss_dssp HHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHH-HHHHHHHHC-TTCCEEEES--SHHH
T ss_pred HHHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHH-HHHHHHhCC-CCCCEEEEC--ChHH
Confidence 3444554 5666665322 22333334444455422111111222223233443 344555543 569999986 5667
Q ss_pred HHHHHHHHHhhC----CCcEEEEEe
Q 023227 149 ITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 149 ~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.|+..++++.+ .++.|+|.+
T Consensus 188 a~g~~~al~~~g~~vP~di~vvg~d 212 (280)
T 3gyb_A 188 AIGALGAARELGLRVPEDLSIIGYD 212 (280)
T ss_dssp HHHHHHHHHHHTCCTTTTCEEEEES
T ss_pred HHHHHHHHHHcCCCCCCeeEEEEEC
Confidence 889999999986 367888885
No 272
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=62.08 E-value=4.5 Score=30.43 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=57.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 109 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 109 (285)
..++....|..|..+|...+..|.+++++-+. +.+.+.++ ..|..++..+.. + .
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~~d~~-~-~-------------------- 74 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVVGDAA-E-F-------------------- 74 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEESCTT-S-H--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEEecCC-C-H--------------------
Confidence 34566678999999999999999987777543 23333344 455554332211 0 0
Q ss_pred CCCCCCchHhHHhchHHHHHhh--hCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEe
Q 023227 110 QFENPANPKIHYETTGPELWKG--SGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIE 169 (285)
Q Consensus 110 ~~~~~~~~~~g~~t~~~EI~~q--~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~ 169 (285)
+.+++ + ...|.||++++.-....-+....+...+..++++..
T Consensus 75 -----------------~~l~~~~~-~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 75 -----------------ETLKECGM-EKADMVFAFTNDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp -----------------HHHHTTTG-GGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred -----------------HHHHHcCc-ccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 01111 2 236889998887665555555566556777777653
No 273
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=62.00 E-value=34 Score=29.90 Aligned_cols=54 Identities=13% Similarity=0.210 Sum_probs=38.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~----~~~~Ga~v~~~~~ 84 (285)
+..+.+-.+|.++++..+++++|++++++.|+.- ++.-++. .+..|+.+..+..
T Consensus 155 kva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d 214 (355)
T 4a8p_A 155 KVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDD 214 (355)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECC
T ss_pred EEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 3334444489999999999999999999999853 3333332 3567888877763
No 274
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=61.88 E-value=31 Score=27.84 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=41.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCC--EEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGA--ELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga--~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-... .+.+. .+.++. ..+.++- .+.++..+..++..++.
T Consensus 11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 11 VALVTGASRGIGKAIAELLAERGAKVIGTATSE---SGAQAISDYLGDNGKGMALNV-TNPESIEAVLKAITDEF 81 (248)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHhcccceEEEEeC-CCHHHHHHHHHHHHHHc
Confidence 678998888899999999999999987765432 22222 223333 3344443 23444445555555543
No 275
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=61.72 E-value=61 Score=25.97 Aligned_cols=67 Identities=24% Similarity=0.128 Sum_probs=43.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCCCCChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAFGAELVLTDPAKGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++... ..+++.+ +.+|...+.++-. +.++..+..++..++
T Consensus 7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 7 AVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALAH 74 (245)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecCC-CHHHHHHHHHHHHHH
Confidence 67899999999999999999999998877543 2333332 3447666666643 333333444444444
No 276
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=61.65 E-value=25 Score=27.53 Aligned_cols=51 Identities=8% Similarity=0.145 Sum_probs=38.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+|+..+|.-|.+++......|.+++++... ..+...+...+.+++..+-
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D~ 52 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKEP 52 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECCG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEeccc
Confidence 46899999999999999999999998888764 3444444445677776653
No 277
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=61.52 E-value=34 Score=28.05 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=42.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIIL-RAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
...|||..+|--|+++|..-...|.+++++....... .....+ +..|.++..+..+ .+.++..+..++..++
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999877765432111 112222 4457766554322 2333333444444444
No 278
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=61.51 E-value=39 Score=27.67 Aligned_cols=68 Identities=16% Similarity=0.122 Sum_probs=43.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-.. ..++ +..+.+|.++..+..+ .+.++..+..++..++
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTR---EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE 98 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 67889888889999999999999987776433 2332 2345567766655432 2333444444555444
No 279
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=61.42 E-value=62 Score=25.98 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=42.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|.-|.++|..-...|.+++++......... ..+.++.++..+..+ .+.++..+..++..++
T Consensus 14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (265)
T 2o23_A 14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFAPADVTSEKDVQTALALAKGK 83 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 68899999999999999999999998877655433322 223346555544322 2333333344444443
No 280
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=61.37 E-value=70 Score=27.04 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=65.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=+.. .. ...+.+|++. + +.+ ++.++- +...+.-
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~ 204 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLE-------TLLKES-DVVTIHV 204 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHH-------HHHHHC-SEEEECC
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHH-------HHHhhC-CEEEEec
Confidence 467777889999999999999999987664432 33 2345678753 1 122 233343 4554432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHH--HHHHHHHhh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKEK 159 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~a--Gi~~~~k~~ 159 (285)
..++.. ...+..+.++++ +++.+++-+|+|+..- .+..+++..
T Consensus 205 p~~~~t----~~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 205 PLVEST----YHLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp CCSTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred CCChHH----hhhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 222221 122335677777 4688999999998644 667777653
No 281
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=61.33 E-value=68 Score=26.72 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=40.6
Q ss_pred HHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 12 IGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 12 ~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+.+.+..++. .+.--++ +++..-..|+.|+++|..++.+|.+++++-+. ..+...++.+|++++
T Consensus 137 vae~a~~~~l~~~~~~l~g-~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 137 TAEGTIMMAIQHTDFTIHG-ANVAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp HHHHHHHHHHHHCSSCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHhcCCCCCC-CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 34444444443 2321223 46666778999999999999999976665443 334445566787653
No 282
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=61.25 E-value=61 Score=25.90 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=29.3
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC--CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN--PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~--~~~~vigv~ 169 (285)
.+++++- ++||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 179 ~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~p~di~vig~d 221 (276)
T 3ksm_A 179 LRLLKET-PTIDGLFTP--NESTTIGALVAIRQSGMSKQFGFIGFD 221 (276)
T ss_dssp HHHHHHC-SCCCEEECC--SHHHHHHHHHHHHHTTCTTSSEEEEES
T ss_pred HHHHHhC-CCceEEEEC--CchhhhHHHHHHHHcCCCCCeEEEEeC
Confidence 3444443 568999876 5667789999999886 367788874
No 283
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=61.22 E-value=33 Score=27.82 Aligned_cols=53 Identities=11% Similarity=-0.044 Sum_probs=36.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|......|.+++++...... ......++..|.++..+.
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 69 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEE
Confidence 67888899999999999999999987776543211 112334455676665543
No 284
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=60.93 E-value=19 Score=30.16 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=39.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CHHHHH---HHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-M--SLERRI---ILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~--~~~~~~---~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|+.|.+++......|.+++++.+.. . .+.+.. .++..|.+++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~ 65 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecC
Confidence 578999999999999999888999988887653 1 123322 33456777777664
No 285
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=60.72 E-value=43 Score=27.13 Aligned_cols=71 Identities=14% Similarity=0.214 Sum_probs=41.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HH-HHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LE-RRIILRAF-GAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~-~~~~~~~~-Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|.+++++-..... .. ....++.. |.++..+..+ .+.++..+..++..++
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 67888888999999999999999987766443211 11 12223332 7677665532 2333333344444444
No 286
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=60.37 E-value=21 Score=29.24 Aligned_cols=72 Identities=11% Similarity=0.103 Sum_probs=44.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++....... .....++..|.++..+..+ .+.++..+..++..++.
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 568888889999999999999999987775443221 1233445566666554322 23444445555555543
No 287
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=60.37 E-value=37 Score=27.98 Aligned_cols=71 Identities=15% Similarity=0.057 Sum_probs=43.3
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+ |--|.++|......|.+++++.........++.++. .| ..++.++- .+.++..+..++..++.
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDV-SLDEDIKNLKKFLEENW 97 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 67888876 779999999988999998777654322334444443 34 33444443 23344444455555554
No 288
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=59.99 E-value=61 Score=27.46 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=45.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC--CCCHHHHHH----HHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA--SMSLERRII----LRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~--~~~~~~~~~----~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||.++|--|.++|......|.++++.... .....+++. ++..|.++..+..+ .+.++..+..++..++.
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998887654 333444433 34557666555432 23333344444444443
No 289
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=59.88 E-value=45 Score=26.50 Aligned_cols=72 Identities=19% Similarity=0.177 Sum_probs=42.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCC-------eEEEEecCCCCHH-HHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQY-------RLIITMPASMSLE-RRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~-------~~~iv~p~~~~~~-~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|. +++++........ ....++..|.++..+..+ .+.++..+..+++.++
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 83 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHh
Confidence 578899999999999999888898 6655544311111 122334457777665432 2333334444555554
Q ss_pred C
Q 023227 102 T 102 (285)
Q Consensus 102 ~ 102 (285)
.
T Consensus 84 ~ 84 (244)
T 2bd0_A 84 Y 84 (244)
T ss_dssp T
T ss_pred C
Confidence 4
No 290
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=59.82 E-value=47 Score=26.90 Aligned_cols=71 Identities=13% Similarity=0.038 Sum_probs=42.7
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FG-AELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+ |--|+++|..-...|.+++++-........++.++. .| ..++.++-. +.++..+..++..++.
T Consensus 10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVT-QDEELDALFAGVKEAF 84 (261)
T ss_dssp EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 67888876 789999999988889997777554322334444433 34 344444532 3334444445554443
No 291
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=59.75 E-value=75 Score=26.39 Aligned_cols=42 Identities=14% Similarity=0.294 Sum_probs=29.2
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-CCcEEEEEe
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 169 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-~~~~vigv~ 169 (285)
..+++++- ++||.||++ +..++.|+..++++.+ .++.|+|.+
T Consensus 180 ~~~ll~~~-~~~~aI~~~--nD~~A~g~~~al~~~G~~dv~VvG~D 222 (316)
T 1tjy_A 180 AEGIIKAY-PDLDAIIAP--DANALPAAAQAAENLKRNNLAIVGFS 222 (316)
T ss_dssp HHHHHHHC-SSCCEEEEC--STTHHHHHHHHHHHTTCCSCEEEEBC
T ss_pred HHHHHHhC-CCCCEEEEC--CCccHHHHHHHHHHcCCCCEEEEEeC
Confidence 34444443 468999987 4567788999998887 457777774
No 292
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=59.54 E-value=22 Score=28.33 Aligned_cols=71 Identities=18% Similarity=0.190 Sum_probs=42.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHH-HHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE-RRIIL-RAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~-~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++........ ....+ +..|.++..+..+ .+.++..+..++..++
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 6789999999999999999999999766654321111 12222 2567777665432 2333333333444443
No 293
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=59.34 E-value=81 Score=26.65 Aligned_cols=145 Identities=13% Similarity=0.056 Sum_probs=77.7
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------------CCCH-----HHHH
Q 023227 14 YSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA-----------------SMSL-----ERRI 70 (285)
Q Consensus 14 ~~~~~~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~-----------------~~~~-----~~~~ 70 (285)
...+....++ +. +.|+-..+.....+++-.+...+++.+..... ..+. .-.+
T Consensus 78 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (386)
T 3sg0_A 78 AQNARKLLSEEKV-----DVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGK 152 (386)
T ss_dssp HHHHHHHHHTSCC-----SEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHH
T ss_pred HHHHHHHHhhcCc-----eEEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHH
Confidence 3344455554 44 56776666667778888899999998875421 0111 1244
Q ss_pred HHHHcCC-EEEEeCCCCChH-HHHHHHHHHHHhCCCeEecC-CCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcc
Q 023227 71 ILRAFGA-ELVLTDPAKGMK-GAVQKAEEILAKTPNAYMLQ-QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGG 147 (285)
Q Consensus 71 ~~~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg 147 (285)
.+..+|. +|.++..+..+. +..+..++..++. +.-.+. ....+.. .-+.....+|.+ ..||.||++ +.+.
T Consensus 153 ~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~--~d~~~~~~~~~~---~~~dav~~~-~~~~ 225 (386)
T 3sg0_A 153 YIAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKL-GFELTTHEVYARSD--ASVTGQVLKIIA---TKPDAVFIA-SAGT 225 (386)
T ss_dssp HHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHH-TCEECCCEEECTTC--SCCHHHHHHHHH---TCCSEEEEE-CCSG
T ss_pred HHHhcCCCEEEEEecCchHHHHHHHHHHHHHHHc-CCEEEEEEeeCCCC--CcHHHHHHHHHh---cCCCEEEEe-cCcc
Confidence 4556675 555554322222 3334444444444 222221 1001000 011222223322 358998875 4567
Q ss_pred cHHHHHHHHHhhCCCcEEEEEec
Q 023227 148 TITGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 148 ~~aGi~~~~k~~~~~~~vigv~~ 170 (285)
.+.++.+.+++.+-++++++...
T Consensus 226 ~a~~~~~~~~~~g~~~~~~~~~~ 248 (386)
T 3sg0_A 226 PAVLPQKALRERGFKGAIYQTHG 248 (386)
T ss_dssp GGHHHHHHHHHTTCCSEEECCGG
T ss_pred hHHHHHHHHHHcCCCCcEEeccc
Confidence 78899999999887778876643
No 294
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=59.26 E-value=20 Score=29.12 Aligned_cols=69 Identities=7% Similarity=-0.046 Sum_probs=38.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ--YRLIITMPASMSLERRII-LRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G--~~~~iv~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...| ..++++-.. ..+++. .+.+|.++..+..+ .+.++..+..++..++.
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC---HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC---HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 67888888889999998877765 444443332 233332 23446655554322 23344444455555543
No 295
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=59.15 E-value=23 Score=29.41 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=38.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHH---HHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS--LERRII---LRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~--~~~~~~---~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|.-|.+++......|.+++++.+...+ +.+... ++..|.+++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 64 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCS
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCC
Confidence 57899999999999999988899998888765332 444433 3345777665553
No 296
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=59.05 E-value=50 Score=26.72 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=43.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+. +..+.++.++..+..+ .+.++..+..++..++.
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999997776433 2222 2334455555444321 23344445555555554
No 297
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=58.85 E-value=55 Score=26.76 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=35.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcC--CEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFG--AELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~G--a~v~~~~ 83 (285)
..|||..+|.-|.++|......|.+++++....... .....++..| .++..+.
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEE
Confidence 678999999999999999999999977775532111 1223445555 4555443
No 298
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=58.78 E-value=43 Score=27.16 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=27.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++...
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 67899999999999999999999987776543
No 299
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=58.78 E-value=43 Score=27.35 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=38.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~-~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|.-|.++|......|.+++++........+ .+.++.+|.++..+.
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK 89 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEE
Confidence 67888889999999999988899998877655433332 334455677665554
No 300
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=58.70 E-value=48 Score=27.29 Aligned_cols=69 Identities=13% Similarity=0.072 Sum_probs=43.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+. +..+.+|.++..+..+ .+.++..+..++..++.
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 67899988999999999999999988776543 2222 2334456666554432 23334444445554443
No 301
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=58.68 E-value=25 Score=29.16 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=38.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHH---HHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM---SLERRI---ILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~---~~~~~~---~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|+-|.+++......|.+++++.+... .+.+.. .++..|.+++..+-
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~ 65 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCT
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEecc
Confidence 5789999999999999999899999888776532 134433 23445777665553
No 302
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.60 E-value=75 Score=26.07 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCc
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 146 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~G 146 (285)
.-.+.+...|++|+.++.+ .+...+.++++.+......+ .+. |-.. ......+..++.+++ +.+|.+|..+|..
T Consensus 24 aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g~~~~~-~~~-Dv~~-~~~v~~~~~~~~~~~-G~iDiLVNNAG~~ 97 (255)
T 4g81_D 24 AYAEGLAAAGARVILNDIR--ATLLAESVDTLTRKGYDAHG-VAF-DVTD-ELAIEAAFSKLDAEG-IHVDILINNAGIQ 97 (255)
T ss_dssp HHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTTCCEEE-CCC-CTTC-HHHHHHHHHHHHHTT-CCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEE-EEe-eCCC-HHHHHHHHHHHHHHC-CCCcEEEECCCCC
Confidence 4567778899999999863 23344445555554433333 233 3333 345566777888887 5799999998864
No 303
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=58.60 E-value=72 Score=25.85 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=26.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
..|||..+|--|.++|..-...|.+++++-.
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 6788988888999999999899998766643
No 304
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=58.49 E-value=62 Score=28.09 Aligned_cols=115 Identities=12% Similarity=0.038 Sum_probs=70.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=+. .+.......|.+. ++ +.+ ++.++- +...+.-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~-------ell~~a-DiV~l~~ 223 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKD-------ALFEQS-DVLSVHL 223 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHH-------HHHhhC-CEEEEec
Confidence 46777788999999999999999998877433 2334556678752 22 222 333443 4444432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHhhCCCcEEEEEec
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~~~~~~~vigv~~ 170 (285)
..++.. ...+..+.++++ +++.+++-+|.|+.. ..+..++++.. +.-.+.++
T Consensus 224 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g~--i~gA~lDV 277 (352)
T 3gg9_A 224 RLNDET----RSIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRGR--PGMAAIDV 277 (352)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHTS--SSEEEECC
T ss_pred cCcHHH----HHhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhCC--ccEEEecc
Confidence 222221 122345677777 478999999998864 34566666532 33344443
No 305
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=58.29 E-value=77 Score=26.07 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=25.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
..|||..+|--|.++|..-...|.+++++-.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 6788888888999999998888988766643
No 306
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=57.93 E-value=11 Score=29.81 Aligned_cols=28 Identities=14% Similarity=0.075 Sum_probs=25.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
|+.-.+|-.|.++|...++.|++++||=
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 6777999999999999999999999984
No 307
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=57.80 E-value=47 Score=27.33 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=34.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC-EEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAFGA-ELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~Ga-~v~~~~ 83 (285)
..|||+.+|--|.++|......|.+++++....... .....++..|. ++..+.
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEe
Confidence 678899889999999999999999877765432111 11223444454 555443
No 308
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=57.70 E-value=25 Score=28.15 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=27.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|.-|.++|......|.+++++...
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999987776543
No 309
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=57.35 E-value=78 Score=25.84 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=29.3
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-----CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-----~~~~vigv~ 169 (285)
.+++++- +.+|+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 180 ~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 180 KSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 3444443 568999885 4667789999998875 368888885
No 310
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=57.30 E-value=66 Score=25.51 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=31.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..++....|..|..+|......|. ++ ++..+ +.+.+.++ .|.+++.-+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~-vid~~--~~~~~~~~-~~~~~i~gd 57 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FV-LAEDE--NVRKKVLR-SGANFVHGD 57 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EE-EESCG--GGHHHHHH-TTCEEEESC
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EE-EEECC--HHHHHHHh-cCCeEEEcC
Confidence 356677789999999998877787 44 44433 33445555 666665544
No 311
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=57.19 E-value=76 Score=26.07 Aligned_cols=72 Identities=6% Similarity=0.035 Sum_probs=44.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHc-CCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAF-GAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~-Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|..-...|.+++++-...... .....++.. +.++..+..+ .+.++..+..++..++.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 678999999999999999999999877664422111 112233333 6677666542 23344455555665654
No 312
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=57.14 E-value=51 Score=27.78 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=32.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHHH---HHHHHcCCEEEEeCCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAK---QYRLIITMPASMSLERR---IILRAFGAELVLTDPA 85 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~---G~~~~iv~p~~~~~~~~---~~~~~~Ga~v~~~~~~ 85 (285)
+.++..++|..+..++..+-.. +-.-.|+++........ ..++..|++++.++.+
T Consensus 61 ~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC
T ss_pred CeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC
Confidence 4577778877777766654421 22234555554444333 3445679999998753
No 313
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=56.89 E-value=46 Score=28.68 Aligned_cols=45 Identities=13% Similarity=-0.023 Sum_probs=34.6
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC----CHHHHHHHHH------cCCEEEEeC
Q 023227 39 GNTGIGLAFMAAAKQYRLIITMPASM----SLERRIILRA------FGAELVLTD 83 (285)
Q Consensus 39 GN~g~a~A~~a~~~G~~~~iv~p~~~----~~~~~~~~~~------~Ga~v~~~~ 83 (285)
.|.+++++.+++++|++++++.|+.- ++.-++.++. .|+.+..+.
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 59999999999999999999999853 3333333333 688888776
No 314
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=56.75 E-value=45 Score=26.88 Aligned_cols=68 Identities=16% Similarity=0.119 Sum_probs=42.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|.+++++-.. ..+++ ..+.++.++..+..+ .+.++..+..++..++
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 67889988999999999999999987766443 23322 234456655554432 2334444444555444
No 315
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=56.74 E-value=46 Score=32.40 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=42.2
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCC---CC--HHHHHHHHHcCCEEEEeCC
Q 023227 27 TPGESVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPAS---MS--LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 27 ~~g~~~vv~~ssGN~g~a~A~~a~-~~G~~~~iv~p~~---~~--~~~~~~~~~~Ga~v~~~~~ 84 (285)
+++...||+..+|-.|+++|..-. ..|.+.++++..+ .+ ...++.++..|++++.+.-
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~ 591 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQAC 591 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEe
Confidence 455567888888889999998776 7899866666543 22 3456778889999887654
No 316
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=56.72 E-value=44 Score=27.55 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=40.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ-YRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G-~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
..+|++.+|+.|.+++......| .+++++.+..... +...+...|.+++..+-
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~~~l~~~~~~~~~~D~ 60 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQ 60 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HHHHHHHTTCEEEECCT
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HHHHHHHCCCEEEEecC
Confidence 67899999999999999988888 8988887654332 23445567888877664
No 317
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=56.64 E-value=57 Score=29.15 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
||..+.+..+.+ .|. +...++|+....||-|..+|.....+|.+++.+...+
T Consensus 199 ~Gv~~~~~~~~~~~g~-~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~ 251 (419)
T 3aoe_E 199 LGALLVLEALAKRRGL-DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSM 251 (419)
T ss_dssp HHHHHHHHHHHHHHTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 677777776554 443 3333678888899999999999999998888776553
No 318
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=56.33 E-value=17 Score=29.60 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHcCCeEEEEec
Q 023227 38 SGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 38 sGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
||-.|.++|.++...|.+++++-.
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHHCCCEEEEEEC
Confidence 699999999999999999988754
No 319
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=56.05 E-value=48 Score=26.96 Aligned_cols=71 Identities=20% Similarity=0.121 Sum_probs=41.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHc--CCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLE-RRIILRAF--GAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~-~~~~~~~~--Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-....... ....++.. |.++..+..+ .+.++..+..++..++
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 6789999999999999999999998777654321111 12223333 6666554322 2333333444444444
No 320
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=55.87 E-value=27 Score=31.09 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 023227 40 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 83 (285)
Q Consensus 40 N~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~----~~~~Ga~v~~~~ 83 (285)
|.++++..+++++|++++++.|+.- ++.-+.. .+..|+.+..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7899999999999999999999843 4544433 356798887776
No 321
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=55.50 E-value=61 Score=26.20 Aligned_cols=69 Identities=6% Similarity=-0.005 Sum_probs=43.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+++. .+.+|.++..+..+ .+.++..+..++..++.
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 67899999999999999999999987776543 233332 23446555554332 23344444445554444
No 322
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=55.48 E-value=22 Score=31.48 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=34.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVL 81 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~ 81 (285)
.+|+.-..|+.|.+++..++.+|.+++++ .. ...+++.++.+|++.+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~-D~--~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAF-DT--RPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CS--CGGGHHHHHHTTCEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-cC--CHHHHHHHHHcCCEEEE
Confidence 35666678999999999999999875444 33 23455566788998653
No 323
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=55.37 E-value=27 Score=28.33 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=43.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++....... ...+.++..+.++..+..+ .+.++..+..++..++
T Consensus 9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 678888888899999999999999988875553221 1122334445555554322 2334444445555444
No 324
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=55.36 E-value=83 Score=25.53 Aligned_cols=41 Identities=10% Similarity=0.271 Sum_probs=28.7
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-CCcEEEEEe
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 169 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-~~~~vigv~ 169 (285)
..+++++- +.||+||+.-.. +.|+..++++.+ .++.|+|.+
T Consensus 191 ~~~~l~~~-~~~~ai~~~~d~---a~g~~~al~~~g~~di~vig~d 232 (304)
T 3gbv_A 191 LDDFFREH-PDVKHGITFNSK---VYIIGEYLQQRRKSDFSLIGYD 232 (304)
T ss_dssp HHHHHHHC-TTCCEEEESSSC---THHHHHHHHHTTCCSCEEEEES
T ss_pred HHHHHHhC-CCeEEEEEcCcc---hHHHHHHHHHcCCCCcEEEEeC
Confidence 34444443 468999987644 568999999887 477888874
No 325
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=55.22 E-value=41 Score=28.40 Aligned_cols=51 Identities=8% Similarity=0.025 Sum_probs=35.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
.++..++|..+..++..+- +.-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 5666677677777776654 32234566666556666666899999999988
No 326
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=55.19 E-value=44 Score=27.35 Aligned_cols=69 Identities=19% Similarity=0.120 Sum_probs=42.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++........ +..+.++.++..+..+ .+.+...+...+..++
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD--DLVAAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH--HHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 6789999999999999999999998887765432222 2234455555444321 2333333444444444
No 327
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=55.11 E-value=56 Score=28.55 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHc--CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 11 RIGYSMISDAEAK--GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 11 R~a~~~~~~a~~~--g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
++..+.+..+.++ |.-....++|+....||.|..+|.....+|.+++ +..
T Consensus 152 ~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVv-v~D 203 (364)
T 1leh_A 152 YGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLV-VTD 203 (364)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred hHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEE-EEc
Confidence 4555555554432 5211123578888889999999999999999866 443
No 328
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=55.06 E-value=26 Score=30.19 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=41.1
Q ss_pred HcCCCCCCCeEEEeeC-CChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPT-SGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILR----AFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~----~~Ga~v~~~~ 83 (285)
..|.++ | .+|+... ..|.+++++.+++++|++++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 149 ~~g~l~-g-l~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 149 HYSSLK-G-LTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp HHSCCT-T-CEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HhCCcC-C-cEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 346543 2 2344433 368999999999999999999999854 444334333 5788887776
No 329
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=55.00 E-value=68 Score=27.14 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=34.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC------------CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ------------YRLIITMPASMSLERRIILRAFGAELVLTDPA 85 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G------------~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~ 85 (285)
..++..++|..+..++..+...- -.-.|+++...-......++.+|++++.++.+
T Consensus 87 ~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 87 AYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 35666777777776666543221 12345555544455677788899999999854
No 330
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=54.71 E-value=96 Score=26.09 Aligned_cols=132 Identities=13% Similarity=0.140 Sum_probs=68.5
Q ss_pred eEEEeeCCChHHHHHHH--HHHHcCCeEEEEecCCC-------------CH-----HHHHHHHHcCC-EEEEeCCCCChH
Q 023227 31 SVLIEPTSGNTGIGLAF--MAAAKQYRLIITMPASM-------------SL-----ERRIILRAFGA-ELVLTDPAKGMK 89 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~--~a~~~G~~~~iv~p~~~-------------~~-----~~~~~~~~~Ga-~v~~~~~~~~~~ 89 (285)
+.|+-..+.....+++- .+...++|.+....... +. .-.+.+..+|. +|.++..+..+.
T Consensus 75 ~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~iaii~~~~~~g 154 (364)
T 3lop_A 75 VALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVTRIGVLYQEDALG 154 (364)
T ss_dssp EEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCCCEEEEEETTHHH
T ss_pred EEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCceEEEEEeCchhh
Confidence 55555555666777777 88888888775432110 11 12344556675 444443322222
Q ss_pred -HHHHHHHHHHHhCCCeEe-cCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEE
Q 023227 90 -GAVQKAEEILAKTPNAYM-LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYG 167 (285)
Q Consensus 90 -~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vig 167 (285)
+..+..++..++.+.... ...+ .+. ..-+.....+|.+ ..||.||++ +++..+.++.+.+++.+-++++++
T Consensus 155 ~~~~~~~~~~~~~~G~~v~~~~~~-~~~--~~d~~~~~~~l~~---~~~d~v~~~-~~~~~a~~~~~~~~~~g~~~~~i~ 227 (364)
T 3lop_A 155 KEAITGVERTLKAHALAITAMASY-PRN--TANVGPAVDKLLA---ADVQAIFLG-ATAEPAAQFVRQYRARGGEAQLLG 227 (364)
T ss_dssp HHHHHHHHHHHHTTTCCCSEEEEE-CTT--SCCCHHHHHHHHH---SCCSEEEEE-SCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEe-cCC--CccHHHHHHHHHh---CCCCEEEEe-cCcHHHHHHHHHHHHcCCCCeEEE
Confidence 233334444455422110 0001 000 0011222222222 358988885 466778899999999888888877
Q ss_pred Ee
Q 023227 168 IE 169 (285)
Q Consensus 168 v~ 169 (285)
..
T Consensus 228 ~~ 229 (364)
T 3lop_A 228 LS 229 (364)
T ss_dssp CT
T ss_pred ec
Confidence 64
No 331
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=54.66 E-value=48 Score=30.34 Aligned_cols=97 Identities=14% Similarity=0.113 Sum_probs=60.9
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
+...+| ++|+....|+-|..+|..++.+|.+++++-+ ++.+....+.+|+++ + ++++ +.+.-
T Consensus 269 ~~~l~G-ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~---~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGG-KKVLICGYGDVGKGCAEAMKGQGARVSVTEI---DPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCc-CEEEEEccCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 334555 4677777899999999999999997555422 356666778899974 2 2222 22332
Q ss_pred CeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCccc
Q 023227 104 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 148 (285)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~ 148 (285)
+..+... .++. .+..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~at-gt~~-------~i~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTAT-GNKD-------IIMLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECS-SSSC-------SBCHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECC-CCHH-------HHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 4444432 1222 1223566666 46789999998875
No 332
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=54.49 E-value=89 Score=25.66 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=25.1
Q ss_pred HHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCC--CcEEEEE
Q 023227 127 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGI 168 (285)
Q Consensus 127 EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~--~~~vigv 168 (285)
+++++.++.||+||+. +...+.|+..++++.+- ++.|+|.
T Consensus 180 ~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~ 221 (313)
T 3m9w_A 180 NALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQ 221 (313)
T ss_dssp HHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCC
T ss_pred HHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEec
Confidence 3444332468888876 45566788888887753 3555554
No 333
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=54.47 E-value=65 Score=26.68 Aligned_cols=30 Identities=27% Similarity=0.321 Sum_probs=22.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCC---eEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQY---RLIITM 60 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~---~~~iv~ 60 (285)
..|||..+|--|+++|..-...|. +++++-
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~ 67 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASNGDMKLILAA 67 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEEecCCChHHHHHHHHHHHcCCCCceEEEEE
Confidence 678999888899999988766665 555443
No 334
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=54.19 E-value=68 Score=25.69 Aligned_cols=68 Identities=9% Similarity=-0.039 Sum_probs=41.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE--EEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE--LVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~--v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|..-...|.+++++-.. ..+...+.....+ .+.++- .+.++..+..++..++.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDID---EKRSADFAKERPNLFYFHGDV-ADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTCTTEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcccCCeEEeeC-CCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999987776432 3444444433333 333343 23344444445554443
No 335
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=54.02 E-value=98 Score=25.97 Aligned_cols=133 Identities=13% Similarity=0.037 Sum_probs=71.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--------------CCH-----HHHHHHHHcCC-EEEEeCCCCChH-
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS--------------MSL-----ERRIILRAFGA-ELVLTDPAKGMK- 89 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~--------------~~~-----~~~~~~~~~Ga-~v~~~~~~~~~~- 89 (285)
+.|+-..++....+++-.+...+++++...... .+. .-.+.+..+|. +|.++..+..+.
T Consensus 74 ~~iiG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~~g~ 153 (368)
T 4eyg_A 74 NVIAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNGIKKVATLTSDYAPGN 153 (368)
T ss_dssp SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHHH
T ss_pred EEEECCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcCCCEEEEEecCchHhH
Confidence 566756666777888888999999987653211 111 12345556675 554444322222
Q ss_pred HHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCC---cEEE
Q 023227 90 GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPN---IKLY 166 (285)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~---~~vi 166 (285)
+..+..++..++.+..........+. ..-+.....+|.+ ..||.||+.. ++..+.++.+.+++.+-. +.++
T Consensus 154 ~~~~~~~~~l~~~g~~v~~~~~~~~~--~~d~~~~~~~l~~---~~~d~v~~~~-~~~~a~~~~~~~~~~g~~~~~v~~~ 227 (368)
T 4eyg_A 154 DALAFFKERFTAGGGEIVEEIKVPLA--NPDFAPFLQRMKD---AKPDAMFVFV-PAGQGGNFMKQFAERGLDKSGIKVI 227 (368)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSS--SCCCHHHHHHHHH---HCCSEEEEEC-CTTCHHHHHHHHHHTTGGGTTCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEEeCCCC--CCcHHHHHHHHHh---cCCCEEEEec-cchHHHHHHHHHHHcCCCcCCceEE
Confidence 23444455555553222110000000 0112223333332 2589998854 444889999999987644 6788
Q ss_pred EEe
Q 023227 167 GIE 169 (285)
Q Consensus 167 gv~ 169 (285)
+..
T Consensus 228 ~~~ 230 (368)
T 4eyg_A 228 GPG 230 (368)
T ss_dssp EET
T ss_pred ecC
Confidence 764
No 336
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=53.92 E-value=50 Score=29.97 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 11 RIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
||..+.+..+.+.--......+|+....||-|..+|.....+|.+++.+...
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~ 284 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDS 284 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEET
T ss_pred HHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeC
Confidence 6777777766543223333367888889999999999999999888866543
No 337
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=53.72 E-value=50 Score=27.20 Aligned_cols=69 Identities=7% Similarity=0.059 Sum_probs=41.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+. ...+.+|.++..+..+ .+.++..+..++..++.
T Consensus 31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 67888888889999999999999988776443 2222 2234445544444321 23344444445554443
No 338
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=53.68 E-value=95 Score=26.63 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=65.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=|. .+.. ..+.+|++. + +. .++.++- +...+.-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~-~~~~---~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 227 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPI-ISPE---VSASFGVQQ--L----PL-------EEIWPLC-DFITVHT 227 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSS-SCHH---HHHHTTCEE--C----CH-------HHHGGGC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCC-cchh---hhhhcCcee--C----CH-------HHHHhcC-CEEEEec
Confidence 46777788999999999999999998776543 2332 356678753 1 22 2333443 4444432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHH--HHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~a--Gi~~~~k~ 158 (285)
..++.. ..-+..++++++ +++.+++-+|+|+..- .+..+++.
T Consensus 228 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 228 PLLPST----TGLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCCTTT----TTSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH----HHhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 222221 122335677777 4789999999998655 66777765
No 339
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=53.63 E-value=86 Score=25.24 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=24.6
Q ss_pred eEEEeeCCC-hHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSG-NTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssG-N~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+| --|.++|......|.+++++-..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 567777766 49999999988899987666443
No 340
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=53.29 E-value=45 Score=26.43 Aligned_cols=51 Identities=25% Similarity=0.227 Sum_probs=34.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILRAFGAELVL 81 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~~~Ga~v~~ 81 (285)
..|||..+|--|.++|..-...|.+++++...+.+. .....++..|.++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~ 55 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVA 55 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEE
Confidence 578999999999999999999999887764433221 112334555665443
No 341
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=53.06 E-value=89 Score=25.22 Aligned_cols=71 Identities=14% Similarity=0.037 Sum_probs=43.2
Q ss_pred eEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCC-EEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTS--GNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGA-ELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ss--GN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~Ga-~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+ |--|.++|..-...|.+++++-........++.++. .|. .++.++- .+.++..+..++..++.
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV-AEDASIDTMFAELGKVW 85 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccC-CCHHHHHHHHHHHHHHc
Confidence 57888876 789999999999999998777654433344454433 332 3344443 23334444445555554
No 342
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=52.94 E-value=1e+02 Score=28.81 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=47.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCCh-HHHHHHHHHHHHhC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM-KGAVQKAEEILAKT 102 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~-~~~~~~a~~~~~~~ 102 (285)
...|||..++--|+++|...++.|.++++. .........+.++..|.+++.+.. +. .+..+..++..+++
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~~~i~~~g~~~~~~~~--Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKDATKTVDEIKAAGGEAWPDQH--DVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCccHHHHHHHHHhcCCeEEEEEc--ChHHHHHHHHHHHHHhc
Confidence 357888888889999999999999987665 322334556667778888877664 34 34334444544444
No 343
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=52.89 E-value=92 Score=25.35 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=29.8
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCC---CcEEEEEe
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP---NIKLYGIE 169 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~---~~~vigv~ 169 (285)
..+++++- +++|.+++-+.+-..+.|+..++++.+- ++.|+|.+
T Consensus 186 ~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D 232 (306)
T 8abp_A 186 ANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGIN 232 (306)
T ss_dssp HHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEES
T ss_pred HHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeC
Confidence 33444433 4688844445567778899999998864 67888885
No 344
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=52.76 E-value=48 Score=26.40 Aligned_cols=49 Identities=27% Similarity=0.289 Sum_probs=35.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
..|||..+|--|.++|..-...|.+++++.... .. ..+.+|...+.++-
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--~~---~~~~~~~~~~~~D~ 52 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNP--EE---AAQSLGAVPLPTDL 52 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HH---HHHHHTCEEEECCT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HH---HHHhhCcEEEecCC
Confidence 678999999999999999999999877765442 21 12333666666664
No 345
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=52.62 E-value=64 Score=27.91 Aligned_cols=104 Identities=16% Similarity=0.111 Sum_probs=65.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++.+=+...+.... .|++. ++ +. .++.++- +...+.-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l-------~ell~~s-DvV~l~~ 235 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TL-------DSLLGAS-DIFLIAA 235 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SH-------HHHHHTC-SEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CH-------HHHHhhC-CEEEEec
Confidence 467777889999999999999999988775554333221 15532 22 22 2334443 4554432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
-.++. -+..+..+.++++ +++.+++-++.|+.. ..+..+++.
T Consensus 236 Plt~~----T~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 236 PGRPE----LKGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp CCCGG----GTTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHH----HHHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 22222 1233456778888 479999999999975 445556654
No 346
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=52.43 E-value=85 Score=25.73 Aligned_cols=73 Identities=14% Similarity=0.063 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCC
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 145 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~ 145 (285)
...+.+...|++|+.++.+ .+...+.++++.+......++ +. |-.. ......+..++.+++ +.+|.+|-.+|.
T Consensus 22 aiA~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g~~~~~~-~~-Dvt~-~~~v~~~~~~~~~~~-G~iDiLVNNAGi 94 (254)
T 4fn4_A 22 AIAKKFALNDSIVVAVELL--EDRLNQIVQELRGMGKEVLGV-KA-DVSK-KKDVEEFVRRTFETY-SRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 3456677899999999863 233344445554433222222 22 2233 345566777888888 579999999884
No 347
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=52.38 E-value=89 Score=25.00 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=42.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++...... +..|...+.++-. +.++..+..++..++.
T Consensus 9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQYPFATEVMDVA-DAAQVAQVCQRLLAET 72 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SCCSSEEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hcCCceEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998877654321 2245566666642 3344444455555554
No 348
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=52.19 E-value=92 Score=26.22 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=72.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------------CCH-----HHHHHHHHcCC-EEEEeCCCCC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS----------------MSL-----ERRIILRAFGA-ELVLTDPAKG 87 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~----------------~~~-----~~~~~~~~~Ga-~v~~~~~~~~ 87 (285)
.+.|+-..+.....+++-.+...++|.+...... .+. .-.+.+...|. +|.++..+..
T Consensus 83 v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~~~~~ 162 (375)
T 4evq_A 83 ADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTWKYA 162 (375)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSH
T ss_pred ceEEEcCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCCcEEEEEecCch
Confidence 3566666666677788888889999987543110 011 12344555665 5555543222
Q ss_pred hH-HHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEE
Q 023227 88 MK-GAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLY 166 (285)
Q Consensus 88 ~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vi 166 (285)
+. +..+..++..++.+..........+. ..-+.....+|.+ ..||.||+. +++..+.++.+.+++.+-++.++
T Consensus 163 ~~~~~~~~~~~~l~~~G~~v~~~~~~~~~--~~d~~~~~~~l~~---~~~dai~~~-~~~~~a~~~~~~~~~~g~~vp~~ 236 (375)
T 4evq_A 163 AGEEMVSGFKKSFTAGKGEVVKDITIAFP--DVEFQSALAEIAS---LKPDCVYAF-FSGGGALKFIKDYAAANLGIPLW 236 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECTT--CCCCHHHHHHHHH---HCCSEEEEE-CCTHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEEecCCC--CccHHHHHHHHHh---cCCCEEEEe-cCcchHHHHHHHHHHcCCCceEE
Confidence 22 33444455555553322110000000 0011222223322 258998885 45678899999999998888888
Q ss_pred EEe
Q 023227 167 GIE 169 (285)
Q Consensus 167 gv~ 169 (285)
+..
T Consensus 237 ~~~ 239 (375)
T 4evq_A 237 GPG 239 (375)
T ss_dssp EEG
T ss_pred ecC
Confidence 863
No 349
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=51.82 E-value=54 Score=28.55 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=36.7
Q ss_pred EEEeeC-CChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHH------cCCEEEEeC
Q 023227 32 VLIEPT-SGNTGIGLAFMAAAKQYRLIITMPASM--SLERRIILRA------FGAELVLTD 83 (285)
Q Consensus 32 ~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~~~~------~Ga~v~~~~ 83 (285)
+|+... .-|.+++++.+++++|++++++.|+.- ++.-++.++. .|+.+..+.
T Consensus 190 kva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 190 KIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp EEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred EEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 344433 357899999999999999999999854 5554555543 366776665
No 350
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=51.81 E-value=1e+02 Score=27.00 Aligned_cols=60 Identities=13% Similarity=0.173 Sum_probs=41.1
Q ss_pred HcCCCCCCCeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCC----CHHHHH----HHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTSG--NTGIGLAFMAAAKQYRLIITMPASM----SLERRI----ILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssG--N~g~a~A~~a~~~G~~~~iv~p~~~----~~~~~~----~~~~~Ga~v~~~~ 83 (285)
..|.++ | .+|+....+ |.+.++..+++++|++++++-|+.- ++.-++ ..+..|+.+..+.
T Consensus 174 ~~G~l~-g-lkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 174 KFGNLK-N-KKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp HHSSCT-T-CEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred HhCCCC-C-CEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 345543 2 345544444 8899999999999999999999853 233322 2466788887776
No 351
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=51.75 E-value=66 Score=26.56 Aligned_cols=32 Identities=6% Similarity=0.047 Sum_probs=27.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|......|.+++++...
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999987776543
No 352
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=51.56 E-value=77 Score=28.91 Aligned_cols=55 Identities=20% Similarity=0.213 Sum_probs=40.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS---M--SLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~---~--~~~~~~~~~~~Ga~v~~~~~ 84 (285)
...|||..+|--|.++|..-...|.+.++++..+ . .......++..|+++..+.-
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 299 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAAC 299 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEc
Confidence 5789999999999999999888998655554332 1 13445677889999887654
No 353
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=51.47 E-value=28 Score=30.55 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=34.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.+|+.-..|+.|++++..++.+|.+++++ ..+ +.+++.++.+|++++
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~-d~~--~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMAT-DVR--AATKEQVESLGGKFI 219 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSC--STTHHHHHHTTCEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE-eCC--HHHHHHHHHcCCeEE
Confidence 45666678999999999999999974443 332 234555677999864
No 354
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=51.42 E-value=51 Score=26.64 Aligned_cols=67 Identities=10% Similarity=0.048 Sum_probs=40.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHc--CCEEEEeCCCCChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RAF--GAELVLTDPAKGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~~--Ga~v~~~~~~~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|......|.+++++... ..+.+.+ +.+ ....+.++-. +.++..+..++..++
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~-d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLD---VMAAQAVVAGLENGGFAVEVDVT-KRASVDAAMQKAIDA 83 (263)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCTTCCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHHhcCCeEEEEeCC-CHHHHHHHHHHHHHH
Confidence 67899999999999999999999987776443 2333332 223 3445555532 333333334444443
No 355
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=51.36 E-value=65 Score=26.44 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=41.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEE--eCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVL--TDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~-~~~~~Ga~v~~--~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+++ ..+.++.++.. ++- .+.++..+..++..++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDV-TDPDSVRALFTATVEKF 100 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecC-CCHHHHHHHHHHHHHHc
Confidence 57888888889999999999999987766443 22322 23444544444 343 23334444445554443
No 356
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=51.35 E-value=53 Score=26.66 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=27.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|.-|+++|......|.+++++-..
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999987776543
No 357
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=51.33 E-value=46 Score=27.31 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++-..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67889999999999999999999987776543
No 358
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=51.09 E-value=49 Score=27.24 Aligned_cols=69 Identities=22% Similarity=0.148 Sum_probs=44.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+++ ..+.+|.++..+..+ .+.++..+..++..++.
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 67899999999999999999999987776443 23333 334566666554432 23444444555555543
No 359
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=51.07 E-value=38 Score=30.35 Aligned_cols=51 Identities=24% Similarity=0.127 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 11 RIGYSMISDAEAK-GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
|+..+.+..+.+. |. +....+|+....||-|..+|.....+|.+++.+...
T Consensus 202 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~ 253 (424)
T 3k92_A 202 QGVTICIEEAVKKKGI-KLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDA 253 (424)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5677777665543 43 333467888888999999999988888888777654
No 360
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=50.96 E-value=34 Score=30.59 Aligned_cols=44 Identities=14% Similarity=0.240 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 023227 40 NTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 83 (285)
Q Consensus 40 N~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~----~~~~Ga~v~~~~ 83 (285)
|.+++++.+++++|++++++.|+.- .+..+.. ++..|+.+..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 6999999999999999999999854 4544433 456888888776
No 361
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=50.89 E-value=78 Score=28.46 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
||+.+.+..+.+ .|. +....+|+....||-|..+|.....+|.+++.+...+
T Consensus 216 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 216 RGVFITAAAAAEKIGL-QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp HHHHHHHHHHHHHHTC-CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 677777766553 443 3333678888899999999999999998888776543
No 362
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=50.83 E-value=73 Score=25.97 Aligned_cols=68 Identities=15% Similarity=0.000 Sum_probs=43.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||+.+|--|.++|..-...|.+++++-.. ..+++.+.......+.++-. +.++..+...+..++.
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARR---VERLKALNLPNTLCAQVDVT-DKYTFDTAITRAEKIY 85 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESC---HHHHHTTCCTTEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHhhcCCceEEEecCC-CHHHHHHHHHHHHHHC
Confidence 67899999999999999999999998877543 33444333233444555542 3344444455555544
No 363
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=50.66 E-value=69 Score=25.79 Aligned_cols=68 Identities=15% Similarity=0.039 Sum_probs=41.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|......|.+++++-.. ..+.+. .+.+|.++..+..+ .+.++..+..++..++
T Consensus 7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 7 TVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999997776543 233332 33345555443321 2333333444444444
No 364
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=50.61 E-value=44 Score=28.15 Aligned_cols=111 Identities=15% Similarity=0.156 Sum_probs=66.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+.|.++|..++.+|++++++=+...+... . ..+. +. .++.++- +...+.-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~--~~~~---~l-------~ell~~a-DiV~l~~ 181 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV--------D--VISE---SP-------ADLFRQS-DFVLIAI 181 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC--------S--EECS---SH-------HHHHHHC-SEEEECC
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc--------c--cccC---Ch-------HHHhhcc-CeEEEEe
Confidence 56777788999999999999999999888554322111 1 1121 22 2233443 4444433
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCccc--HHHHHHHHHhhCCCcEEEEEec
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT--ITGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~--~aGi~~~~k~~~~~~~vigv~~ 170 (285)
..++.. ...+..+.++.+ +++.+++-+|.|+. -..+..++++.. +.-.+.++
T Consensus 182 P~t~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~g~--i~ga~lDV 235 (290)
T 3gvx_A 182 PLTDKT----RGMVNSRLLANA--RKNLTIVNVARADVVSKPDMIGFLKERS--DVWYLSDV 235 (290)
T ss_dssp CCCTTT----TTCBSHHHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHHCT--TCEEEESC
T ss_pred eccccc----hhhhhHHHHhhh--hcCceEEEeehhcccCCcchhhhhhhcc--ceEEeecc
Confidence 222222 122345677777 47899999999985 455666666532 34445544
No 365
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=50.33 E-value=97 Score=24.86 Aligned_cols=32 Identities=16% Similarity=0.078 Sum_probs=27.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|.-|.++|..-...|.+++++-..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 8 GVLVTGGARGIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999987776544
No 366
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=50.27 E-value=71 Score=26.08 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=41.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRI-ILRAFGAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+.+ ..+.++.++..+..+ .+.++..+..++. ++.
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~ 101 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQL 101 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHh
Confidence 57888888889999999999999987766443 23322 234456655554432 2333334444444 443
No 367
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=49.97 E-value=1.1e+02 Score=27.28 Aligned_cols=51 Identities=16% Similarity=0.110 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~ 62 (285)
||+.+.+..+.+ .|. +....+|+....||-|..+|..... +|.+++.+...
T Consensus 190 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGI-DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTC-CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCC-CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 678878777654 444 4334678888889999999987777 88888866554
No 368
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=49.83 E-value=24 Score=29.50 Aligned_cols=93 Identities=11% Similarity=0.071 Sum_probs=54.8
Q ss_pred chhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH-----HHHHHHHHHcCCeEEEEe--cCCCCHHHHHHHHHcCCEEE
Q 023227 8 VKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG-----IGLAFMAAAKQYRLIITM--PASMSLERRIILRAFGAELV 80 (285)
Q Consensus 8 ~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g-----~a~A~~a~~~G~~~~iv~--p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+..+....++...+++..- ..++.-+--|-- -..+..|+..|+..+++. |......-...++.+|-+++
T Consensus 79 ~~~~~~~~~v~~~r~~~~~----~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 79 TTPDICFELIAQIRARNPE----TPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPI 154 (271)
T ss_dssp CCHHHHHHHHHHHHHHCTT----SCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHhcCCC----CCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEE
Confidence 4445566667666654321 235555555532 335777888999998884 33445667788899999866
Q ss_pred -EeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023227 81 -LTDPAKGMKGAVQKAEEILAKTPNAYML 108 (285)
Q Consensus 81 -~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 108 (285)
++.+... .+ +.++.++...+..|.
T Consensus 155 ~lvap~t~-~e---ri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 155 FIAPPTAS-DE---TLRAVAQLGKGYTYL 179 (271)
T ss_dssp EEECTTCC-HH---HHHHHHHHCCSCEEE
T ss_pred EEECCCCC-HH---HHHHHHHHCCCeEEE
Confidence 5554332 23 344444444455554
No 369
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=49.78 E-value=1.2e+02 Score=25.73 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=21.6
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g---~a~A~~a~~~G~~~~iv~p~ 62 (285)
+.+|.+..||.| .++|...+..|+++.++++.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 456667777665 34444455679999998765
No 370
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=49.59 E-value=82 Score=25.90 Aligned_cols=51 Identities=14% Similarity=0.179 Sum_probs=36.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERR-IILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~-~~~~~~Ga~v~~~~~ 84 (285)
..|||.++|--|.++|..-...|.+++++... ..+. ...+.++.++..+..
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~ 69 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVREL 69 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEEEC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEEEc
Confidence 67899999999999999999999987776543 2332 233455777766653
No 371
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.50 E-value=56 Score=27.19 Aligned_cols=32 Identities=28% Similarity=0.264 Sum_probs=27.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++...
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999997776543
No 372
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=49.40 E-value=1e+02 Score=24.84 Aligned_cols=31 Identities=16% Similarity=0.136 Sum_probs=26.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
..|||..+|.-|.++|......|.+++++-.
T Consensus 18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 18 VAIITGGAGGIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 6789999999999999999999998777644
No 373
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=49.29 E-value=16 Score=31.19 Aligned_cols=58 Identities=12% Similarity=0.029 Sum_probs=41.0
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 023227 22 AKGLITPGESVLIEPTS---GNTGIGLAFMAAAK-QYRLIITMPASM-SLERRIILRAFGAELVLTD 83 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~-G~~~~iv~p~~~-~~~~~~~~~~~Ga~v~~~~ 83 (285)
..|.++ | .+|+.... +|.+++++.+++++ |++++++.|+.- ++..+ ++..|+++..+.
T Consensus 143 ~~g~l~-g-l~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 143 HFNTID-G-LVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVE 205 (299)
T ss_dssp HHSCST-T-CEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEES
T ss_pred HhCCcC-C-cEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeC
Confidence 346543 3 23444433 79999999999999 999999999854 33333 567898877765
No 374
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=49.24 E-value=1.1e+02 Score=27.91 Aligned_cols=123 Identities=14% Similarity=0.046 Sum_probs=70.4
Q ss_pred HHHHHHHcCCeEEE---------EecCCCC--HHHHHHHHHcCCEEEEeCCCC---Ch-HHHHHHHHHHHHhCCCeEe-c
Q 023227 45 LAFMAAAKQYRLII---------TMPASMS--LERRIILRAFGAELVLTDPAK---GM-KGAVQKAEEILAKTPNAYM-L 108 (285)
Q Consensus 45 ~A~~a~~~G~~~~i---------v~p~~~~--~~~~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~-~ 108 (285)
+..+|+..|.++++ .-|.-+. -......-..|++.+....+. .| .++.+...+.+.+-...++ -
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 55679999999764 2222221 124455566899999886532 22 3555555554443322111 0
Q ss_pred ------CC-CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEecCCC
Q 023227 109 ------QQ-FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTES 173 (285)
Q Consensus 109 ------~~-~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~ 173 (285)
.. ...+......-...+.++.++++ ..+|++..-||.|+-=++ ...|...|+++.+...
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta~~is----r~RP~~pI~a~t~~~~ 428 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTPRLVS----KYRPNCPIILVTRCPR 428 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHHHHHH----HTCCSSCEEEEESCTT
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHHHHHH----hhCCCCCEEEEcCCHH
Confidence 00 01111222333444557777774 568999999998765444 3469999999987544
No 375
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=49.18 E-value=1.1e+02 Score=25.06 Aligned_cols=70 Identities=11% Similarity=0.089 Sum_probs=41.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEE--eCCCCCh-HHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAFG-AELVL--TDPAKGM-KGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~G-a~v~~--~~~~~~~-~~~~~~a~~~~~~ 101 (285)
..|||+.+|--|.++|..-...|.+++++...... ...+..++..+ .++.. ++-. +. +...+.++++.++
T Consensus 14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVT-DPIATMSSLADFIKTH 88 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTT-SCHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCC-CcHHHHHHHHHHHHHh
Confidence 67888888889999999988899987776654221 12234444444 34444 4432 32 3333444444444
No 376
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=49.12 E-value=1.2e+02 Score=25.75 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=63.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
.+|..-..|+.|.++|..++.+|++++++-+.. .. ...+.+|.+. . +.+ ++.++- +...+.-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~---~---~l~-------~~l~~a-DvVil~v 212 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR-KE---EVERELNAEF---K---PLE-------DLLRES-DFVVLAV 212 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHHCCEE---C---CHH-------HHHHHC-SEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc-ch---hhHhhcCccc---C---CHH-------HHHhhC-CEEEECC
Confidence 467777889999999999999999977764433 22 2334567532 1 222 222333 4444432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHH--HHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTIT--GAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~a--Gi~~~~k~ 158 (285)
-.++.. ...+..++.+.+ +++.+++-++.|+... .+..+++.
T Consensus 213 p~~~~t----~~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 213 PLTRET----YHLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222211 112224666776 3678999999998765 57777765
No 377
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=49.11 E-value=1.1e+02 Score=24.95 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=40.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc-CCEEEEeCCCCChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AF-GAELVLTDPAKGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~-Ga~v~~~~~~~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-.. ..+.+.+. .+ +...+.++-. +.++..+..++..++
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKD---ESGGRALEQELPGAVFILCDVT-QEDDVKTLVSETIRR 79 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHCTTEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCCeEEEcCCC-CHHHHHHHHHHHHHH
Confidence 67899999999999999999999987766433 33333332 22 3344445532 333334444444444
No 378
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=49.00 E-value=12 Score=36.64 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=31.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 22 AKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 22 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
+.+.+++|.+.+|.+.+|--|.+....|+.+|.++++..
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~ 377 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA 377 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe
Confidence 456788887777777779999999999999999876654
No 379
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=48.99 E-value=1.1e+02 Score=25.04 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=26.5
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 196 ~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 196 DGPTAVVVA--SVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp TSCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 468999986 4667789999999886 257888885
No 380
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=48.84 E-value=45 Score=28.03 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=34.4
Q ss_pred eEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDPA 85 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~ 85 (285)
+.++..++|..+..++..+-. -|= .|+++...-......++..|++++.++.+
T Consensus 69 ~~i~~~~g~~~a~~~~~~~l~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 69 PSILLTAGSSEGIRAAIEAYASLEA--QLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred HHEEEeCChHHHHHHHHHHHhCCCC--eEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 356777777777777766542 232 34444433445567788999999999854
No 381
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=48.79 E-value=59 Score=26.77 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=35.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCH-HHHHHHH-HcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS-MSL-ERRIILR-AFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~-~~~-~~~~~~~-~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|..-...|.+++++.... ... .....++ ..|.++..+.
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 80 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEE
Confidence 678898889999999999889999877765543 111 1123333 5676665554
No 382
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=48.71 E-value=89 Score=23.98 Aligned_cols=50 Identities=10% Similarity=0.062 Sum_probs=37.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+|+..+|.-|.+++......|.+++++.+.. .+...+. .+.+++..+-
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~-~~~~~~~~D~ 51 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA---GKITQTH-KDINILQKDI 51 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS---HHHHHHC-SSSEEEECCG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc---hhhhhcc-CCCeEEeccc
Confidence 468999999999999999999999998887653 3333333 5677776663
No 383
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=48.58 E-value=31 Score=28.67 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=19.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLII 58 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~i 58 (285)
..+|+..+|-.|++++......|.++++
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i 148 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVL 148 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEE
Confidence 5566665666777777777777776333
No 384
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=48.54 E-value=41 Score=28.65 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=41.9
Q ss_pred eEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCCeEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAK-TPNAYML 108 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~-~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~ 108 (285)
+.|+..++|..+..++..+- .-|= .|+++...-......++..|++++.++.+.++.-..+..++..++ .....++
T Consensus 93 ~~v~~~~G~~~al~~~~~~l~~~gd--~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~ 170 (369)
T 3cq5_A 93 DNLWAANGSNEILQQLLQAFGGPGR--TALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFV 170 (369)
T ss_dssp GGEEEESHHHHHHHHHHHHHCSTTC--EEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEE
T ss_pred HhEEECCChHHHHHHHHHHhcCCCC--EEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEE
Confidence 34666777777776655543 2342 333333223344567788999999887432211111122222222 3466666
Q ss_pred CCCCCC
Q 023227 109 QQFENP 114 (285)
Q Consensus 109 ~~~~~~ 114 (285)
....||
T Consensus 171 ~~~~np 176 (369)
T 3cq5_A 171 TTPNNP 176 (369)
T ss_dssp ESSCTT
T ss_pred eCCCCC
Confidence 544454
No 385
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=48.31 E-value=61 Score=27.36 Aligned_cols=82 Identities=15% Similarity=0.087 Sum_probs=45.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC-CCChHHHHHHHHHHHHhCCCeEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP-AKGMKGAVQKAEEILAKTPNAYMLQ 109 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~ 109 (285)
+.|+..++|..+..++..+- +.-.-.|+++...-..-...++..|++++.++. ..++ -..+..++.........++.
T Consensus 83 ~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~ 160 (365)
T 3get_A 83 ENIIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLC 160 (365)
T ss_dssp GGEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEE
T ss_pred ceEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEc
Confidence 35777777877777766553 222234455554444556678889999999984 2333 22333333333333455553
Q ss_pred CCCCC
Q 023227 110 QFENP 114 (285)
Q Consensus 110 ~~~~~ 114 (285)
...||
T Consensus 161 ~p~np 165 (365)
T 3get_A 161 LPNNP 165 (365)
T ss_dssp SSCTT
T ss_pred CCCCC
Confidence 33344
No 386
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=48.20 E-value=24 Score=29.42 Aligned_cols=93 Identities=11% Similarity=-0.002 Sum_probs=55.3
Q ss_pred chhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH-----HHHHHHHHHcCCeEEEEecC--CCCHHHHHHHHHcCCEEE
Q 023227 8 VKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTG-----IGLAFMAAAKQYRLIITMPA--SMSLERRIILRAFGAELV 80 (285)
Q Consensus 8 ~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g-----~a~A~~a~~~G~~~~iv~p~--~~~~~~~~~~~~~Ga~v~ 80 (285)
+..+....++...+++..- ..++.-+--|-- -..+..|+..|++.+++.+. .....-+..++.+|.+.+
T Consensus 77 ~~~~~~~~~v~~ir~~~~~----~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPD----MPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPI 152 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTT----CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHhcCCC----CCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEE
Confidence 4445556666666654321 235555555532 33567788889999988533 445667888999999866
Q ss_pred -EeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023227 81 -LTDPAKGMKGAVQKAEEILAKTPNAYML 108 (285)
Q Consensus 81 -~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 108 (285)
++.+... .+ +.+++++...+..|.
T Consensus 153 ~liaP~t~-~e---ri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 153 FIAPPNAD-AD---TLKMVSEQGEGYTYL 177 (267)
T ss_dssp CEECTTCC-HH---HHHHHHHHCCSCEEE
T ss_pred EEECCCCC-HH---HHHHHHHhCCCcEEE
Confidence 5555332 23 344455554455554
No 387
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=48.18 E-value=79 Score=25.45 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=27.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|+++|..-...|.+++++...
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999987776543
No 388
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=48.15 E-value=1.2e+02 Score=25.18 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=30.6
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-C-CcEEEEEec
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-P-NIKLYGIEP 170 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-~-~~~vigv~~ 170 (285)
..+++++- +.||+||+. +...+.|+..++++.+ | ++.|+|++-
T Consensus 179 ~~~ll~~~-~~~~aI~~~--nd~~A~g~~~al~~~Gip~dv~vig~D~ 223 (325)
T 2x7x_A 179 MDSMLRRH-PKIDAVYAH--NDRIAPGAYQAAKMAGREKEMIFVGIDA 223 (325)
T ss_dssp HHHHHHHC-SCCCEEEES--STTHHHHHHHHHHHTTCTTSSEEEEEEC
T ss_pred HHHHHHhC-CCCCEEEEC--CCchHHHHHHHHHHcCCCCCeEEEEECC
Confidence 34454443 469999976 5567789999998875 3 588988864
No 389
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.09 E-value=64 Score=23.63 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=57.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH---HcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEec
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR---AFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML 108 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~---~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 108 (285)
.++....|..|..++..-...|.+++++-+.. ..+.+.++ ..|.+++.-+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~--~~~~~~~~~~~~~~~~~i~gd~------------------------ 58 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP--EDDIKQLEQRLGDNADVIPGDS------------------------ 58 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC--HHHHHHHHHHHCTTCEEEESCT------------------------
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC--hHHHHHHHHhhcCCCeEEEcCC------------------------
Confidence 35555689999999999888899988886542 23322222 22333333221
Q ss_pred CCCCCCCchHhHHhchHHHHHhhhC-CCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEE
Q 023227 109 QQFENPANPKIHYETTGPELWKGSG-GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGI 168 (285)
Q Consensus 109 ~~~~~~~~~~~g~~t~~~EI~~q~~-~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv 168 (285)
..+ +.+++.+ ...|.|+++++.-..-.-+....|..+|..+++..
T Consensus 59 ------~~~---------~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 59 ------NDS---------SVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp ------TSH---------HHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred ------CCH---------HHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 110 1122211 34788888888766555566677777788787774
No 390
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=48.09 E-value=97 Score=26.74 Aligned_cols=105 Identities=21% Similarity=0.215 Sum_probs=63.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
.+|..-..|+.|.++|..++.+|++++++=+...+ . ..+.+|++. +. +. .++.++- +...+.-
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~---~~~~~g~~~--~~---~l-------~ell~~a-DvV~l~~ 231 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-G---VERALGLQR--VS---TL-------QDLLFHS-DCVTLHC 231 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-T---HHHHHTCEE--CS---SH-------HHHHHHC-SEEEECC
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-h---hHhhcCCee--cC---CH-------HHHHhcC-CEEEEcC
Confidence 56777789999999999999999998776443222 1 124567642 22 22 2333443 4444432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
..++.. ...+..+.++++ +++.+++-+++|+.. ..+..++++
T Consensus 232 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 232 GLNEHN----HHLINDFTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp CCCTTC----TTSBSHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhHHHHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 222221 122335667777 478999999999864 456666665
No 391
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=48.08 E-value=39 Score=24.09 Aligned_cols=45 Identities=7% Similarity=-0.022 Sum_probs=29.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
+.+|++ .|..|..++...+..|.+++++-+ ++.+.+.++..|.++
T Consensus 8 ~v~I~G-~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~ 52 (144)
T 2hmt_A 8 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHA 52 (144)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEE
T ss_pred cEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEE
Confidence 344554 599999999999999998776643 234444444444443
No 392
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=47.99 E-value=64 Score=28.77 Aligned_cols=51 Identities=18% Similarity=0.138 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHH-cCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 023227 11 RIGYSMISDAEA-KGLIT-PGESVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~ 62 (285)
|++.+.+..+.+ .|. + ...++|.....||-|+.+|..++. +|++++.+-+.
T Consensus 192 ~Gv~~~~~~~~~~~G~-~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGW-DTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTC-SCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCC-cccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 677777776654 443 2 223678888999999999999999 99998877544
No 393
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=47.91 E-value=54 Score=29.60 Aligned_cols=51 Identities=12% Similarity=-0.074 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
||+.+.+..+.+ .| .....++|+....||-|..+|.....+|.+++.+...
T Consensus 211 ~Gv~~~~~~~~~~~G-~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~ 262 (449)
T 1bgv_A 211 YGSVYYVEAVMKHEN-DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 262 (449)
T ss_dssp HHHHHHHHHHHHHTT-CCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHHHHcc-CCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeC
Confidence 788888877654 44 3433467888889999999999999999998876553
No 394
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=47.87 E-value=32 Score=30.32 Aligned_cols=49 Identities=14% Similarity=0.013 Sum_probs=37.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.+|+.-..|..|..+|..++.+|.+++++ .. .+.+++.++.+|++.+.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~-D~--~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGY-DV--RPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEE-CS--SGGGHHHHHHTTCEECCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEE-eC--CHHHHHHHHHcCCeEEec
Confidence 35777788999999999999999986554 32 245677778899986643
No 395
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=47.86 E-value=1.2e+02 Score=25.32 Aligned_cols=44 Identities=16% Similarity=-0.061 Sum_probs=35.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM-SLERRIILRA 74 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~-~~~~~~~~~~ 74 (285)
+.+||+++|--|..++......|.+++++..... ...++..++.
T Consensus 27 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~ 71 (351)
T 3ruf_A 27 TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKT 71 (351)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhh
Confidence 7899999999999999999999999988876533 4555555554
No 396
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=47.58 E-value=1.1e+02 Score=26.31 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=64.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
.+|..-.-|+-|.++|..++.+|++++++=+.. ... . ...|.+. ++ . .++.++- +...++-
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~-~~~-~---~~~g~~~--~~----l-------~ell~~a-DvV~l~~ 202 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVK-RED-L---KEKGCVY--TS----L-------DELLKES-DVISLHV 202 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CHH-H---HHTTCEE--CC----H-------HHHHHHC-SEEEECC
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCc-chh-h---HhcCcee--cC----H-------HHHHhhC-CEEEEeC
Confidence 467777889999999999999999988775543 222 1 1356643 11 2 2333443 5555433
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
-.++.. ...+..+.++++ ++..+++-+|.|+.. ..+..+++.
T Consensus 203 P~t~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 203 PYTKET----HHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCChHH----HHhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222222 223455777887 479999999999964 445555653
No 397
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=47.54 E-value=58 Score=26.23 Aligned_cols=48 Identities=4% Similarity=0.098 Sum_probs=34.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~ 83 (285)
..|||..+|--|.++|..-...|.+++++-... .. ..+.++.++..+.
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--~~---~~~~~~~~~~~~~ 58 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--ED---VVADLGDRARFAA 58 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--HH---HHHHTCTTEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--HH---HHHhcCCceEEEE
Confidence 678999888899999999999999988775532 22 2344566665544
No 398
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=47.39 E-value=1.2e+02 Score=24.88 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=29.7
Q ss_pred HHHHhhh--CCCCCEEEEccCCcccHHHHHHHHHhhCC----CcEEEEEec
Q 023227 126 PELWKGS--GGRIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIEP 170 (285)
Q Consensus 126 ~EI~~q~--~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~----~~~vigv~~ 170 (285)
.+++++- ++.||+||+. +..++.|+..++++.+- ++.|+|.+-
T Consensus 180 ~~ll~~~~~~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~ 228 (306)
T 2vk2_A 180 ESFIKAENNGKNICMVYAH--NDDMVIGAIQAIKEAGLKPGKDILTGSIDG 228 (306)
T ss_dssp HHHHHHTTTTTTCCEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEEEC
T ss_pred HHHHHhCCCCCCeeEEEEC--CchHHHHHHHHHHHcCCCCCCCeEEEeecC
Confidence 4444442 1468999885 56678899999988752 577888853
No 399
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=46.98 E-value=68 Score=25.76 Aligned_cols=68 Identities=4% Similarity=0.026 Sum_probs=41.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|+++|..-...|.+++++-.. ..+.+. .+.+|.++..+..+ .+.++..+..++..++
T Consensus 8 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999987666432 233332 23346666655432 2333333344444443
No 400
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=46.92 E-value=57 Score=26.57 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=27.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
..|||..+|--|.++|..-...|.+++++..
T Consensus 13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 6789998999999999999999998887765
No 401
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=46.85 E-value=66 Score=29.44 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=32.5
Q ss_pred eEEEeeCCChHH-HHHHH--HHHHcCCeEEEEecCCC-CH---HHHHHHHHcCCEEE
Q 023227 31 SVLIEPTSGNTG-IGLAF--MAAAKQYRLIITMPASM-SL---ERRIILRAFGAELV 80 (285)
Q Consensus 31 ~~vv~~ssGN~g-~a~A~--~a~~~G~~~~iv~p~~~-~~---~~~~~~~~~Ga~v~ 80 (285)
+.+|.+..||.| -+++. .-+..|.++.++++... +. ..++.++.+|..+.
T Consensus 54 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 54 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 566777777766 44444 34456999999987642 32 34667788887664
No 402
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=46.78 E-value=1e+02 Score=24.81 Aligned_cols=63 Identities=24% Similarity=0.183 Sum_probs=41.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|+++|......|.+++++........ ....+.++-. +.++..+..++..++.
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~-d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDIT-DTEQVEQAYKEIEETH 85 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTT-SHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCC-CHHHHHHHHHHHHHHc
Confidence 6889999999999999999999999887765422111 1455555542 3344444445555554
No 403
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=46.59 E-value=39 Score=29.97 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=29.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 26 ITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 26 ~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
+.|+ ++|..-.+|..|+.++.+|+++|++++++-+.
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4565 45667788999999999999999999887554
No 404
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.48 E-value=44 Score=26.44 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=27.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC--CeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQ--YRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G--~~~~iv~p~ 62 (285)
..|||..+|--|.++|......| .+++++...
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 67899999999999999998999 887777654
No 405
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=46.41 E-value=82 Score=25.01 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=27.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|......|.+++++...
T Consensus 13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999997777543
No 406
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=46.40 E-value=70 Score=26.82 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=27.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
+.+||+.+|.-|.+++......|.+++++..
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 6789999999999999998889999888764
No 407
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=46.34 E-value=56 Score=29.53 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=55.5
Q ss_pred EecCCCCCCCchHhHHhchHHHHHhhhC----------CCCCEE--EEccCCcccHHHHHHH----HHhhCCCcEEEEEe
Q 023227 106 YMLQQFENPANPKIHYETTGPELWKGSG----------GRIDAL--VSGIGTGGTITGAGKF----LKEKNPNIKLYGIE 169 (285)
Q Consensus 106 ~~~~~~~~~~~~~~g~~t~~~EI~~q~~----------~~~d~i--v~~vG~Gg~~aGi~~~----~k~~~~~~~vigv~ 169 (285)
++..+.+...|+..||.+.|.|+.+++- ..++.+ +.+.| |||=+|++.. +++.+|+..++.+.
T Consensus 92 ~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlg-GGTGSG~gs~lle~L~~ey~kk~~~~~~ 170 (451)
T 3ryc_A 92 LITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFG-GGTGSGFTSLLMERLSVDYGKKSKLEFS 170 (451)
T ss_dssp EEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESS-SHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred eeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccC-CCCCccHHHHHHHHHHHhcCcceEEEEE
Confidence 4455555566777798899988876531 124434 44444 4444555444 55567775555443
Q ss_pred cCCCCccCCCCCCCccccccCCCCCccC------cccccCCeEEEeCHHHHHHHHHH
Q 023227 170 PTESPVLSGGKPGPHKIQGIGAGFVPGV------LEVNIIDEVVQVSSDEAIETAKL 220 (285)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~gl~~~~~~~~------~~~~~~d~~~~v~d~e~~~a~~~ 220 (285)
...++.... .. .-|++ -..+..|..+.++++.+.+.+..
T Consensus 171 v~P~~~~s~-----~v-------vepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~ 215 (451)
T 3ryc_A 171 IYPAPQVST-----AV-------VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215 (451)
T ss_dssp EECCTTTCC-----CT-------THHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHH
T ss_pred EecCCCccc-----cc-------ceehHHHHHHHHHHhcccceeEeccHHHHHHHHH
Confidence 222221100 00 01221 12466788999999988877744
No 408
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=46.25 E-value=88 Score=26.74 Aligned_cols=52 Identities=17% Similarity=0.113 Sum_probs=31.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
.++..++|..+..++..+- ++-.-.|+++...-......++..|++++.++.
T Consensus 104 ~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 155 (407)
T 3nra_A 104 GLIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL 155 (407)
T ss_dssp SEEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEB
T ss_pred cEEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccchHHHHHHcCCEEEEeec
Confidence 4666677777766665542 222223444443334556778899999988764
No 409
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=45.60 E-value=67 Score=26.11 Aligned_cols=70 Identities=13% Similarity=0.051 Sum_probs=40.7
Q ss_pred eEEEeeC--CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE--EeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPT--SGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV--LTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~s--sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~--~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||.. +|--|.++|......|.+++++-... ........+.++.++. .++- .+.++..+..++..++.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-LRLIQRITDRLPAKAPLLELDV-QNEEHLASLAGRVTEAI 82 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-HHHHHHHHTTSSSCCCEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-HHHHHHHHHhcCCCceEEEccC-CCHHHHHHHHHHHHHHh
Confidence 6788886 77899999999999999877664432 1111222334454443 3443 23334444445555544
No 410
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=45.54 E-value=44 Score=29.75 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=37.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~ 82 (285)
.+|+.-..|..|..+|..++.+|.+++++ ..+ +.+++.++.+|++.+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~-D~~--~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSAT-DVR--PAAKEQVASLGAKFIAV 239 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSS--TTHHHHHHHTTCEECCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEE-cCC--HHHHHHHHHcCCceeec
Confidence 35777788999999999999999976554 332 34577778899986544
No 411
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=45.41 E-value=54 Score=27.80 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=31.8
Q ss_pred eEEEeeCCChHHHHHHHHHHH----cCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAA----KQYRLIITMPASMSLER-RIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~----~G~~~~iv~p~~~~~~~-~~~~~~~Ga~v~~~~~ 84 (285)
+.++..++|..+..++..+-. -|=+ +++......... ...++..|++++.++.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd~-vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNKN-VLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCCE-EEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCCe-EEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 467777888888877776543 3432 223322222222 3567889999998875
No 412
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=44.92 E-value=74 Score=26.27 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=21.7
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTG---IGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g---~a~A~~a~~~G~~~~iv~p~ 62 (285)
+.+|.+..||.| .++|...+..|.++.++++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 456777777765 34444455679999998764
No 413
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=44.92 E-value=97 Score=26.90 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=64.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQ 109 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~-~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 109 (285)
++|..-.-|+-|.++|..++.+|++ ++++=+...+.. ..+.+|++. +. +.+ ++.++- +...+.
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~ 228 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NIE-------ELVAQA-DIVTVN 228 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SHH-------HHHHTC-SEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CHH-------HHHhcC-CEEEEC
Confidence 5677778899999999999999997 776644332332 345677542 22 222 233343 444443
Q ss_pred CCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 110 QFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 110 ~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
--.++.. ...+..+.++++ +++.+++-+|.|+.. ..+..++++
T Consensus 229 ~P~t~~t----~~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 229 APLHAGT----KGLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp CCCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCChHH----HHHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 2222221 122335667777 478999999999854 456666665
No 414
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=44.76 E-value=30 Score=26.77 Aligned_cols=37 Identities=14% Similarity=-0.055 Sum_probs=29.1
Q ss_pred CCCCCCeEEEeeCCChH--HHHHHHHHHHcCCeEEEEec
Q 023227 25 LITPGESVLIEPTSGNT--GIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 25 ~~~~g~~~vv~~ssGN~--g~a~A~~a~~~G~~~~iv~p 61 (285)
.++|++.-++.+.||+. ...+|..++..|++++.+.+
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 57888666666666655 46777789999999999998
No 415
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=44.71 E-value=1.4e+02 Score=25.25 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=28.8
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEec
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~ 170 (285)
..||.||++. ++..+.++.+.+++.+.++++++...
T Consensus 197 ~~~dav~~~~-~~~~a~~~~~~~~~~g~~~~~~~~~~ 232 (392)
T 3lkb_A 197 AGVEYVVHQN-VAGPVANILKDAKRLGLKMRHLGAHY 232 (392)
T ss_dssp TTCCEEEEES-CHHHHHHHHHHHHHTTCCCEEEECGG
T ss_pred cCCCEEEEec-CcchHHHHHHHHHHcCCCceEEEecC
Confidence 3589988754 67788899999999988888888743
No 416
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=44.71 E-value=45 Score=27.17 Aligned_cols=71 Identities=17% Similarity=0.181 Sum_probs=40.2
Q ss_pred eEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcC---CEEEEeCCCCChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGN--TGIGLAFMAAAKQYRLIITMPASMSLER-RIILRAFG---AELVLTDPAKGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN--~g~a~A~~a~~~G~~~~iv~p~~~~~~~-~~~~~~~G---a~v~~~~~~~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|+ -|+++|..-++.|.++++.-........ .+.++..| +..+.++- .+.++..+..++..+++
T Consensus 8 ~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 8 TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDV-QSDEEVINGFEQIGKDV 84 (256)
T ss_dssp EEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence 6788875543 7788888888899988776554333322 33344443 23344443 23344445555555554
No 417
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=44.66 E-value=1.3e+02 Score=25.72 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=64.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=+...... ..+.+|++. + +. .++.++- +...+.-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 208 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ---TEQRLGLRQ--V----AC-------SELFASS-DFILLAL 208 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH---HHHHHTEEE--C----CH-------HHHHHHC-SEEEECC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh---HHHhcCcee--C----CH-------HHHHhhC-CEEEEcC
Confidence 4677778899999999999999999877754432332 234456532 1 12 2233443 4554432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
-.++.. ...+..|.++.+ +++.+++-+|.|+.. ..+..+++.
T Consensus 209 P~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 209 PLNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 222221 223445777887 479999999999864 455666654
No 418
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=44.51 E-value=41 Score=27.11 Aligned_cols=32 Identities=9% Similarity=0.046 Sum_probs=27.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|......|.+++++...
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999987776543
No 419
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=44.19 E-value=71 Score=27.29 Aligned_cols=53 Identities=9% Similarity=-0.059 Sum_probs=34.5
Q ss_pred EEEeeCCChHHHHHHHH-HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 32 VLIEPTSGNTGIGLAFM-AAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~-a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
.|+..++|..+..++.- .+.++-.-.|+++...-..-...++..|++++.++.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 57778888888877742 222222223445554455667778899999999875
No 420
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=43.91 E-value=1.4e+02 Score=24.78 Aligned_cols=44 Identities=14% Similarity=0.175 Sum_probs=28.8
Q ss_pred hHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCC--CcEEEEEe
Q 023227 124 TGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGIE 169 (285)
Q Consensus 124 ~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~--~~~vigv~ 169 (285)
...+++++..+.||+||+. +..++.|+..++++.+- ++.|+|.+
T Consensus 186 ~~~~ll~~~~~~~~aI~~~--nd~~A~g~~~al~~~G~~~di~vvg~D 231 (332)
T 2rjo_A 186 IMQAWMTRFNSKIKGVWAA--NDDMALGAIEALRAEGLAGQIPVTGMD 231 (332)
T ss_dssp HHHHHHHHHGGGEEEEEES--SHHHHHHHHHHHHHTTCBTTBCEECSB
T ss_pred HHHHHHHhcCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCCEEEeec
Confidence 3345555412458888875 56678889999988764 56666664
No 421
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.80 E-value=62 Score=25.22 Aligned_cols=49 Identities=10% Similarity=-0.021 Sum_probs=34.3
Q ss_pred eEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAA-AKQYRLIITMPASMSLE-RRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~-~~G~~~~iv~p~~~~~~-~~~~~~~~Ga~v~~~ 82 (285)
..+|+..+|.-|.+++.... ..|.+++++... +. ++..+...+.++..+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 57 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ---LKTRIPPEIIDHERVTVI 57 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS---HHHHSCHHHHTSTTEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC---ccccchhhccCCCceEEE
Confidence 47899999999999999988 899998887654 33 444442234444443
No 422
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=43.79 E-value=37 Score=24.72 Aligned_cols=30 Identities=13% Similarity=0.114 Sum_probs=21.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
.+..-.+|+.|.+++...+..|.+ +.+...
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 455556799999999988888888 444433
No 423
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=43.62 E-value=1.3e+02 Score=24.30 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC--eEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEcc
Q 023227 66 LERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN--AYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGI 143 (285)
Q Consensus 66 ~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~v 143 (285)
..--+.+...|++|+.++... +..+.+.+..++.++ ..++ +. |-.. ......+..++.+++ +.+|.+|..+
T Consensus 22 ~aiA~~la~~Ga~Vvi~~r~~---~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~-~~~v~~~~~~~~~~~-G~iD~lvnnA 94 (256)
T 4fs3_A 22 FGVAKVLDQLGAKLVFTYRKE---RSRKELEKLLEQLNQPEAHLY-QI-DVQS-DEEVINGFEQIGKDV-GNIDGVYHSI 94 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESSG---GGHHHHHHHHGGGTCSSCEEE-EC-CTTC-HHHHHHHHHHHHHHH-CCCSEEEECC
T ss_pred HHHHHHHHHCCCEEEEEECCH---HHHHHHHHHHHhcCCCcEEEE-Ec-cCCC-HHHHHHHHHHHHHHh-CCCCEEEecc
Confidence 445667778999999988632 233334444444322 2221 11 2222 234455666777777 5799999888
Q ss_pred CCc
Q 023227 144 GTG 146 (285)
Q Consensus 144 G~G 146 (285)
|..
T Consensus 95 g~~ 97 (256)
T 4fs3_A 95 AFA 97 (256)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 424
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=43.43 E-value=71 Score=26.41 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=34.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHH-HcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL--ERRIILR-AFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~--~~~~~~~-~~Ga~v~~~ 82 (285)
..|||..+|--|.++|..-...|.+++++...+... ...+.++ ..|.++..+
T Consensus 11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 65 (291)
T 1e7w_A 11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65 (291)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEE
Confidence 678888888899999999999999877775132111 1122333 557666554
No 425
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=43.19 E-value=81 Score=23.20 Aligned_cols=45 Identities=9% Similarity=-0.136 Sum_probs=17.6
Q ss_pred EeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 023227 34 IEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 78 (285)
Q Consensus 34 v~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~ 78 (285)
+.+........+.-.|...|++.+++.+......-.+..+..|.+
T Consensus 82 vi~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 82 DLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLI 126 (144)
T ss_dssp EECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCE
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCE
Confidence 333333344444444444444444333333233333334444443
No 426
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=43.17 E-value=68 Score=27.18 Aligned_cols=30 Identities=17% Similarity=0.194 Sum_probs=26.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
..|||..+|--|.++|..-...|.+++++.
T Consensus 48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 678888889999999999999999987775
No 427
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=43.11 E-value=1.3e+02 Score=24.10 Aligned_cols=72 Identities=15% Similarity=0.065 Sum_probs=43.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHc---CCEEEEeCCC-CChHHHHHHHHHHHHhC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-ERRIILRAF---GAELVLTDPA-KGMKGAVQKAEEILAKT 102 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-~~~~~~~~~---Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 102 (285)
..|||..+|--|.++|..-...|.+++++-...... .....++.. ....+.++-. .+.++..+...+..++.
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 678999889899999999999999877765432111 112223322 3455555531 23344455556666655
No 428
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=42.92 E-value=1.4e+02 Score=26.08 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=36.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-----------------HHHHHHHHcCCEEEEeCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSL-----------------ERRIILRAFGAELVLTDP 84 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~-----------------~~~~~~~~~Ga~v~~~~~ 84 (285)
.|+...+|..|+.++.+++++|++++++-+....+ .-++.++..+.++++...
T Consensus 21 ~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~ 90 (433)
T 2dwc_A 21 KILLLGSGELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEI 90 (433)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence 45556668899999999999999998876542221 223344556777777654
No 429
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=42.90 E-value=1.3e+02 Score=24.26 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=28.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
..|||..+|.-|.++|......|.+++++....
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD 42 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCc
Confidence 678999999999999999999999988776543
No 430
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=42.89 E-value=1.5e+02 Score=24.91 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=26.5
Q ss_pred HHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 127 ELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 127 EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+++++ .+.||+|||. +..++.|+..++++.+ .++.|+|.+
T Consensus 243 ~ll~~-~~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 243 LILQE-YPDTDCIFCV--SDMPAFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp HHHHH-CTTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred HHHcC-CCCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 34443 2468888875 5667778888888876 246666663
No 431
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=42.86 E-value=40 Score=29.34 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=27.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
++|..-.+|..|+.++.+|+++|++++++-+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46777788999999999999999999988654
No 432
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=42.82 E-value=1.7e+02 Score=25.52 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=34.7
Q ss_pred EEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 33 LIEPTSGNTGIGLAFMAAAK--QYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~--G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
++...+|+.+..++..+-.. . + .|+++.-.-..-...++..|++++.++-
T Consensus 100 i~~t~G~~~al~~~~~~l~~~~~-d-~Vlv~~P~y~~~~~~~~~~g~~~~~v~~ 151 (405)
T 3k7y_A 100 TIQCIGGTGAIFVLLEFLKMLNV-E-TLYVTNPPYINHVNMIESRGFNLKYINF 151 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTTC-C-EEEEESSCCHHHHHHHHTTTCEEEEECC
T ss_pred EEEcCchHHHHHHHHHHHHhcCC-C-EEEEeCCCCHhHHHHHHHcCCeEEEEec
Confidence 56667778887777655443 5 4 4455554556667788999999998863
No 433
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=42.53 E-value=65 Score=25.68 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=27.6
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 29 GESVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 29 g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
+...|||..+|--|.++|......|.+++++-.
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence 346788888999999999999999998777654
No 434
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=42.30 E-value=59 Score=28.38 Aligned_cols=45 Identities=22% Similarity=0.244 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 023227 39 GNTGIGLAFMAAAKQYRLIITMPASM--SLERRII----LRAFGAELVLTD 83 (285)
Q Consensus 39 GN~g~a~A~~a~~~G~~~~iv~p~~~--~~~~~~~----~~~~Ga~v~~~~ 83 (285)
+|.++++..+++++|++++++.|+.- ++..+.. .+..|+++..+.
T Consensus 192 ~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~ 242 (358)
T 4h31_A 192 NNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTE 242 (358)
T ss_dssp SHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred cccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceecc
Confidence 58999999999999999999999843 3333333 356789998887
No 435
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=42.21 E-value=2.1e+02 Score=26.32 Aligned_cols=124 Identities=11% Similarity=-0.003 Sum_probs=65.6
Q ss_pred EEEeeCCChHHHHHHHHHHHc------CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCe
Q 023227 32 VLIEPTSGNTGIGLAFMAAAK------QYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNA 105 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~------G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~ 105 (285)
+|..-..||.|.++|...+.. |+++++..+..... .+..+..|..+. +. ...+. .+.+++- +.
T Consensus 56 kIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks--~e~A~e~G~~v~--d~--ta~s~----aEAa~~A-DV 124 (525)
T 3fr7_A 56 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKS--FDEARAAGFTEE--SG--TLGDI----WETVSGS-DL 124 (525)
T ss_dssp EEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSC--HHHHHHTTCCTT--TT--CEEEH----HHHHHHC-SE
T ss_pred EEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhh--HHHHHHCCCEEe--cC--CCCCH----HHHHhcC-CE
Confidence 566677999999999999998 99887776653222 333456776420 10 00011 1222332 44
Q ss_pred EecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhCCCcEEEEEecCCCCc
Q 023227 106 YMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKNPNIKLYGIEPTESPV 175 (285)
Q Consensus 106 ~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~~~~~vigv~~~~~~~ 175 (285)
..+.- +..-+..+..||...++ ++.+ +....|-++.=+-.......++++||-|-|..+..
T Consensus 125 VILaV------P~~~~~eVl~eI~p~LK--~GaI-Ls~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~ 185 (525)
T 3fr7_A 125 VLLLI------SDAAQADNYEKIFSHMK--PNSI-LGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGP 185 (525)
T ss_dssp EEECS------CHHHHHHHHHHHHHHSC--TTCE-EEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHH
T ss_pred EEECC------ChHHHHHHHHHHHHhcC--CCCe-EEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCch
Confidence 44311 12223345557777763 4544 33333332221111111233568999999988754
No 436
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=42.18 E-value=30 Score=29.76 Aligned_cols=31 Identities=6% Similarity=0.150 Sum_probs=26.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMP 61 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p 61 (285)
++|..-.+|-.|+.++.+|+++|++++++-+
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3566667888999999999999999998854
No 437
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=41.97 E-value=90 Score=25.05 Aligned_cols=70 Identities=14% Similarity=0.085 Sum_probs=40.3
Q ss_pred eEEEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeCCC-CChHHHHHHHHHHHH
Q 023227 31 SVLIEPTSGNTGIGLAFMAAA---KQYRLIITMPASMS-LERRIILRAF--GAELVLTDPA-KGMKGAVQKAEEILA 100 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~---~G~~~~iv~p~~~~-~~~~~~~~~~--Ga~v~~~~~~-~~~~~~~~~a~~~~~ 100 (285)
..|||..+|--|+++|..-.. .|.+++++-..... ......++.. |.++..+..+ .+.++..+...+..+
T Consensus 8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 578888888899999998877 79987776543211 1112233332 6677655432 233333444444444
No 438
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=41.96 E-value=92 Score=25.95 Aligned_cols=47 Identities=17% Similarity=0.076 Sum_probs=33.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
+++..-..|+.|+++|..++.+|.+++++-+. ..+...++.+|.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~~ 204 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVPF 204 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeEE
Confidence 45666678999999999999999977666443 344555556777643
No 439
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=41.94 E-value=40 Score=29.35 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=29.1
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 27 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 27 ~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
.++ ++|..-.+|..|+.++.+++.+|++++++-+.
T Consensus 12 ~~~-k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 12 LPG-KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 344 46777888999999999999999999988654
No 440
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=41.47 E-value=96 Score=25.43 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=41.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE-EEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE-LVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~-v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
+..|||..++--|+++|....+.|.++++.-..... ..... .+.++- .+.++..+..++..++++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--------GLPEELFVEADL-TTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--------TSCTTTEEECCT-TSHHHHHHHHHHHHHHTS
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--------CCCcEEEEEcCC-CCHHHHHHHHHHHHHHcC
Confidence 367899888889999999999999998877654321 11111 233343 344555556666666663
No 441
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=41.33 E-value=1.4e+02 Score=24.11 Aligned_cols=68 Identities=15% Similarity=0.071 Sum_probs=41.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChHHHHHHHHHHHHh
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRII-LRAFGAELVLTDPA-KGMKGAVQKAEEILAK 101 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 101 (285)
..|||..+|--|.++|..-...|.+++++-.. ..+++. .+.++.++..+..+ .+.++..+..++..++
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 77 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999987776543 233333 23444444443321 2333333444444444
No 442
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=41.22 E-value=1.5e+02 Score=24.36 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=24.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
.|..-..|+.|.++|...+..|++++++-
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 45556889999999999999999988763
No 443
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=40.81 E-value=45 Score=30.14 Aligned_cols=53 Identities=9% Similarity=-0.146 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 10 DRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 10 ~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
-||..+.+..+.+.-..+....+|+....||-|..+|.....+|.+++.+...
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~ 271 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDS 271 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECS
T ss_pred chHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 46777777776654333433467888888999999999988889888766543
No 444
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=40.63 E-value=37 Score=28.77 Aligned_cols=54 Identities=17% Similarity=-0.050 Sum_probs=34.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPA 85 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~ 85 (285)
+.++..++|..+..++..+- +.-.-.|+++...-..-...++..|++++.++..
T Consensus 85 ~~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 85 EELIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp GGEEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred hhEEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 35677778777777776654 2222244444444555667788899999988753
No 445
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=40.62 E-value=1.8e+02 Score=25.11 Aligned_cols=116 Identities=15% Similarity=0.135 Sum_probs=70.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=+...+.. ..+..|++. ++ +. .++.++- +...++-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~---~~~~~g~~~--~~---~l-------~ell~~a-DvV~l~~ 228 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPE---LEKETGAKF--VE---DL-------NEMLPKC-DVIVINM 228 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHH---HHHHHCCEE--CS---CH-------HHHGGGC-SEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHH---HHHhCCCeE--cC---CH-------HHHHhcC-CEEEECC
Confidence 5777788999999999999999999776654433333 334456642 22 22 2333443 4554432
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHhhCCCcEEEEEec
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEP 170 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~~~~~~~vigv~~ 170 (285)
-.++.. ...+..+.++++ +++.+++-++.|+.. ..+..++++. .+.-.+.++
T Consensus 229 Plt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~g--~i~ga~lDV 282 (351)
T 3jtm_A 229 PLTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVESG--HIGGYSGDV 282 (351)
T ss_dssp CCCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHHT--SEEEEEESC
T ss_pred CCCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHhC--CccEEEeCC
Confidence 222222 223456778888 479999999999864 4556666542 244445544
No 446
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=40.51 E-value=1.6e+02 Score=24.51 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=25.6
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
+.||+|||. +...+.|+..++++.+ .++.|+|.+
T Consensus 238 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvvgfD 275 (339)
T 3h5o_A 238 PDCDALFCC--NDDLAIGALARSQQLGIAVPERLAIAGFN 275 (339)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCCcEEEEC--ChHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 468999975 5667889999999876 256777764
No 447
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=40.27 E-value=2e+02 Score=32.13 Aligned_cols=58 Identities=17% Similarity=0.187 Sum_probs=42.1
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-----HHHHHHHHHcCCEEEEeCC
Q 023227 27 TPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-----LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 27 ~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-----~~~~~~~~~~Ga~v~~~~~ 84 (285)
+++...|||+.+|--|+++|..-...|.+.++++..+.. ...++.++..|.+++.+..
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~ 1944 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTS 1944 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEec
Confidence 345567888888889999999999999987666654321 2335556778999887654
No 448
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=40.27 E-value=1.5e+02 Score=24.00 Aligned_cols=42 Identities=10% Similarity=0.140 Sum_probs=30.5
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEec
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 170 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~~ 170 (285)
.+++++ .+.||+||+. +..++.|+..++++.+ .++.|+|.+-
T Consensus 181 ~~~l~~-~~~~~ai~~~--~d~~A~g~~~al~~~G~~vP~di~vvg~D~ 226 (290)
T 2rgy_A 181 CQLLES-KAPFTGLFCA--NDTMAVSALARFQQLGISVPGDVSVIGYDD 226 (290)
T ss_dssp HHHHHH-TCCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHhC-CCCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEeCC
Confidence 444444 2569999974 6677889999999886 3578998864
No 449
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=40.15 E-value=1.5e+02 Score=23.99 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=22.4
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhCC--CcEEEEE
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKNP--NIKLYGI 168 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~~--~~~vigv 168 (285)
+.||+ |++ +...+.|+..++++.+- ++.|+|.
T Consensus 193 ~~~~a-i~~--~d~~a~g~~~al~~~g~~~di~vvg~ 226 (304)
T 3o1i_D 193 GNIDY-IVG--SAVAIEAAISELRSADKTHDIGLVSV 226 (304)
T ss_dssp SCCSE-EEE--CHHHHHHHHHHHTTTTCGGGSEEBCS
T ss_pred CCCCE-EEe--cCcchHHHHHHHHhcCCCCCeEEEEe
Confidence 46888 654 56777888888888764 5666654
No 450
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=40.04 E-value=1e+02 Score=23.94 Aligned_cols=37 Identities=5% Similarity=-0.032 Sum_probs=24.5
Q ss_pred HHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEE
Q 023227 45 LAFMAAAKQYRLIITMPASM---SLERRIILRAFGAELVL 81 (285)
Q Consensus 45 ~A~~a~~~G~~~~iv~p~~~---~~~~~~~~~~~Ga~v~~ 81 (285)
.+..+...|.+.+++..... ...-++.++.+|.++..
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 46677888888887754432 13345667888888764
No 451
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=39.83 E-value=1e+02 Score=24.99 Aligned_cols=53 Identities=19% Similarity=0.111 Sum_probs=35.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMS-LERRIILRAF--GAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~-~~~~~~~~~~--Ga~v~~~~ 83 (285)
..|||..+|--|+++|..-...|.+++++-..... ......++.. +..+..+.
T Consensus 12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEe
Confidence 67888888889999999999999997776543211 1223334433 45665544
No 452
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=39.82 E-value=1.1e+02 Score=22.36 Aligned_cols=15 Identities=7% Similarity=-0.168 Sum_probs=6.7
Q ss_pred HHHHHHcCCEEEEeC
Q 023227 69 RIILRAFGAELVLTD 83 (285)
Q Consensus 69 ~~~~~~~Ga~v~~~~ 83 (285)
++.+...|...+.+.
T Consensus 86 ~~~~~~~g~~~i~~~ 100 (138)
T 1y81_A 86 AKEAVEAGFKKLWFQ 100 (138)
T ss_dssp HHHHHHTTCCEEEEC
T ss_pred HHHHHHcCCCEEEEc
Confidence 333444555444444
No 453
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=39.64 E-value=84 Score=24.91 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=27.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++...
T Consensus 8 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 67889999999999999998999997776543
No 454
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=39.53 E-value=1.9e+02 Score=25.12 Aligned_cols=114 Identities=16% Similarity=0.138 Sum_probs=70.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++.+=|. .+. ......|++. . +. .++.++- +...+.-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~-~~~---~~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~ 238 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPW-LPR---SMLEENGVEP--A----SL-------EDVLTKS-DFIFVVA 238 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSS-SCH---HHHHHTTCEE--C----CH-------HHHHHSC-SEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCC-CCH---HHHhhcCeee--C----CH-------HHHHhcC-CEEEEcC
Confidence 57777888999999999999999998877554 232 2345577652 1 22 2344443 5554433
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHhhCCCcEEEEEecC
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKEKNPNIKLYGIEPT 171 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~~~~~~~vigv~~~ 171 (285)
-.++.. ..-+..+.++++ +++.+++-++.|+.. ..+..+++. ..+. .+.++.
T Consensus 239 Plt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLDV~ 292 (365)
T 4hy3_A 239 AVTSEN----KRFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASDVY 292 (365)
T ss_dssp CSSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEESCC
T ss_pred cCCHHH----HhhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEeeCC
Confidence 223322 123445777887 478999999999875 445566654 3456 566543
No 455
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=39.49 E-value=1.7e+02 Score=24.67 Aligned_cols=106 Identities=16% Similarity=0.073 Sum_probs=64.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++++=+.+.... ..+.+|++. ++ +.+ ++.++- +...+.-
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvVil~~ 210 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS---DEASYQATF--HD---SLD-------SLLSVS-QFFSLNA 210 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh---hhhhcCcEE--cC---CHH-------HHHhhC-CEEEEec
Confidence 4677778899999999999999998777655133332 345578753 22 222 233343 4444433
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
..++.. ...+..++++.+ +++.+++-+|+|+.. ..+..+++.
T Consensus 211 p~~~~t----~~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 211 PSTPET----RYFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCTTT----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred cCchHH----HhhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 222221 122334566776 478999999999753 466777765
No 456
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=39.28 E-value=1.7e+02 Score=24.42 Aligned_cols=41 Identities=22% Similarity=0.251 Sum_probs=28.2
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
.+++++- +.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 239 ~~ll~~~-~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 239 QAMLERS-PDLDFLYYS--NDMIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp HHHHHHS-TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred HHHHhcC-CCCCEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 3444443 468999965 5667789999998876 246677764
No 457
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=39.28 E-value=1.4e+02 Score=23.61 Aligned_cols=73 Identities=19% Similarity=0.161 Sum_probs=43.4
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCC
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGT 145 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~ 145 (285)
.-.+.+...|++|+.++.. .+...+...++.+.. ......+. |..+ ......+..++.++. +.+|.+|..+|.
T Consensus 24 ~~a~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~-~~~~~~~~-D~~~-~~~~~~~~~~~~~~~-g~id~li~~Ag~ 96 (253)
T 3qiv_A 24 AYAEALAREGAAVVVADIN--AEAAEAVAKQIVADG-GTAISVAV-DVSD-PESAKAMADRTLAEF-GGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTT-CEEEEEEC-CTTS-HHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEcCC--HHHHHHHHHHHHhcC-CcEEEEEc-cCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCc
Confidence 4566677789999998863 233333444444333 32222222 3233 334556666777777 579999999986
No 458
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=39.21 E-value=29 Score=29.57 Aligned_cols=28 Identities=18% Similarity=0.141 Sum_probs=25.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
|+.-.+|-.|.++|...++.|++++|+=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 6778899999999999999999999884
No 459
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=39.18 E-value=60 Score=29.04 Aligned_cols=51 Identities=10% Similarity=-0.126 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
||+.+.+..+.+ .|. ....++|+....||-|..+|.....+|.+++.+...
T Consensus 191 ~Gv~~~~~~~~~~~g~-~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 191 FGVAVATREMAKKLWG-GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHS-CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCC-CcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 677777766543 343 332357888888999999999999999998866554
No 460
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=39.09 E-value=1.5e+02 Score=23.78 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=26.4
Q ss_pred CCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEec
Q 023227 134 GRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIEP 170 (285)
Q Consensus 134 ~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~~ 170 (285)
..||+||+. +...+.|+..++++.+ .++.|+|.+-
T Consensus 199 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 237 (296)
T 3brq_A 199 AKFSALVAS--NDDMAIGAMKALHERGVAVPEQVSVIGFDD 237 (296)
T ss_dssp -CCSEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEeecC
Confidence 468999986 5667789999999876 3577888853
No 461
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=38.98 E-value=1.3e+02 Score=25.80 Aligned_cols=54 Identities=11% Similarity=0.047 Sum_probs=36.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC----------------C-HHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASM----------------S-LERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~----------------~-~~~~~~~~~~Ga~v~~~~~ 84 (285)
..|+..++|..|+.++.+++++|++++++-+... + ..-++.++..+.++++...
T Consensus 12 ~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~ 82 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEI 82 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECC
Confidence 3455567788999999999999999887764311 1 1224445566777777654
No 462
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=38.81 E-value=1.5e+02 Score=25.15 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=33.5
Q ss_pred eEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDPA 85 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~ 85 (285)
+.|+..++|..+..++..+-. -|.+ .|+++...-..-...++..|++++.++.+
T Consensus 100 ~~i~~~~g~~~al~~~~~~l~~~g~d-~vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 100 DNLYMTMGAAASLSICFRALTSDAYD-EFITIAPYFPEYKVFVNAAGARLVEVPAD 154 (398)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCSTTC-EEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred HHEEEccCHHHHHHHHHHHHcCCCCC-EEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 356767777777777666542 2412 33344433444566778899999998753
No 463
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=38.62 E-value=1.5e+02 Score=23.72 Aligned_cols=75 Identities=28% Similarity=0.283 Sum_probs=44.1
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCc
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 146 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~G 146 (285)
.-.+.+...|++|+.++.. .+...+...++.+..+...++ +. |... ......+..++.++. +.+|.+|..+|..
T Consensus 27 ~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~-~~-Dv~d-~~~v~~~~~~~~~~~-g~id~lv~nAg~~ 100 (256)
T 3gaf_A 27 AIAGTFAKAGASVVVTDLK--SEGAEAVAAAIRQAGGKAIGL-EC-NVTD-EQHREAVIKAALDQF-GKITVLVNNAGGG 100 (256)
T ss_dssp HHHHHHHHHTCEEEEEESS--HHHHHHHHHHHHHTTCCEEEE-EC-CTTC-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEE-EC-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCCC
Confidence 3456667789999998863 223333344443333233332 22 2223 344566667777777 5799999999864
Q ss_pred c
Q 023227 147 G 147 (285)
Q Consensus 147 g 147 (285)
.
T Consensus 101 ~ 101 (256)
T 3gaf_A 101 G 101 (256)
T ss_dssp C
T ss_pred C
Confidence 3
No 464
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=38.58 E-value=1.4e+02 Score=24.24 Aligned_cols=75 Identities=19% Similarity=0.214 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCC-eEe-cCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccC
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPN-AYM-LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 144 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~-~~~-~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG 144 (285)
.-.+.+...|++|+.+... .....+...++.+..+. ..+ .....++ ......+..++.++. +.+|.+|..+|
T Consensus 27 ~~a~~L~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~---~~~v~~~~~~~~~~~-g~iD~lv~nAg 100 (311)
T 3o26_A 27 EICKQLSSNGIMVVLTCRD--VTKGHEAVEKLKNSNHENVVFHQLDVTDP---IATMSSLADFIKTHF-GKLDILVNNAG 100 (311)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCSEEEEECCTTSC---HHHHHHHHHHHHHHH-SSCCEEEECCC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCCceEEEEccCCCc---HHHHHHHHHHHHHhC-CCCCEEEECCc
Confidence 4466667789999999863 22333444555444322 222 2222222 133455556666666 57999999998
Q ss_pred Ccc
Q 023227 145 TGG 147 (285)
Q Consensus 145 ~Gg 147 (285)
..+
T Consensus 101 ~~~ 103 (311)
T 3o26_A 101 VAG 103 (311)
T ss_dssp CCS
T ss_pred ccc
Confidence 764
No 465
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=38.47 E-value=70 Score=25.31 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=36.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HH-cCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIIL-RA-FGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~-~~-~Ga~v~~~~~ 84 (285)
..|||..+|--|.++|......|.+++++... ..+++.+ +. .+.+++.++-
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRT---QADLDSLVRECPGIEPVCVDL 61 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCCCEEEEeC
Confidence 67899999999999999999999987776543 2333332 22 2667765554
No 466
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=38.44 E-value=1.7e+02 Score=24.24 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=28.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 30 ESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 30 ~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
.+.+||..+|--|.+++..-...|.+++++...
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 367899999999999999999999998887654
No 467
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=38.43 E-value=1.7e+02 Score=24.24 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=25.2
Q ss_pred CCCEEEEccCCcccHHHHHHHHHhhCC----CcEEEEEe
Q 023227 135 RIDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 169 (285)
Q Consensus 135 ~~d~iv~~vG~Gg~~aGi~~~~k~~~~----~~~vigv~ 169 (285)
.||+|||. +..++.|+..++++.+- ++.|+|.+
T Consensus 239 ~~~ai~~~--~d~~A~g~~~al~~~G~~vP~disvig~D 275 (332)
T 2o20_A 239 GATSAVVS--HDTVAVGLLSAMMDKGVKVPEDFEIISGA 275 (332)
T ss_dssp TCCEEEES--CHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred CCCEEEEC--ChHHHHHHHHHHHHcCCCCccCEEEEEeC
Confidence 68999985 56677899999998762 46777774
No 468
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=38.39 E-value=1.6e+02 Score=23.82 Aligned_cols=48 Identities=8% Similarity=0.178 Sum_probs=33.2
Q ss_pred HhHHhchHHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC--CCcEEEEEe
Q 023227 118 KIHYETTGPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN--PNIKLYGIE 169 (285)
Q Consensus 118 ~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~--~~~~vigv~ 169 (285)
..||. ...+++++- +.||+|||. +..++.|+..++++.+ .++.|+|.+
T Consensus 178 ~~~~~-~~~~ll~~~-~~~~ai~~~--nD~~A~g~~~al~~~G~~~dv~vvGfD 227 (288)
T 1gud_A 178 IKALD-VATNVLQRN-PNIKAIYCA--NDTMAMGVAQAVANAGKTGKVLVVGTD 227 (288)
T ss_dssp HHHHH-HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTTSEEEEES
T ss_pred HHHHH-HHHHHHHhC-CCceEEEEC--CCchHHHHHHHHHhcCCCCCeEEEEeC
Confidence 33443 334555543 468999987 5667889999999875 357888884
No 469
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=38.32 E-value=1.5e+02 Score=23.55 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=28.2
Q ss_pred HHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC----CCcEEEEEe
Q 023227 126 PELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN----PNIKLYGIE 169 (285)
Q Consensus 126 ~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~----~~~~vigv~ 169 (285)
.+++++ .+.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 173 ~~~l~~-~~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 217 (275)
T 3d8u_A 173 AKLLLR-DSSLNALVCS--HEEIAIGALFECHRRVLKVPTDIAIICLE 217 (275)
T ss_dssp HHHHTT-CTTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred HHHHhC-CCCCCEEEEc--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 344443 2458999975 5667889999998876 246777774
No 470
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=38.31 E-value=1.5e+02 Score=23.72 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=24.0
Q ss_pred CCEEEEccCCcccHHHHHHHHHhhCC----CcEEEEEe
Q 023227 136 IDALVSGIGTGGTITGAGKFLKEKNP----NIKLYGIE 169 (285)
Q Consensus 136 ~d~iv~~vG~Gg~~aGi~~~~k~~~~----~~~vigv~ 169 (285)
||+||+. +..++.|+..++++.+- ++.|+|.+
T Consensus 202 ~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 202 PTAILCY--NDEIALKVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp CSEEECS--SHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CeEEEEe--CcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 8999876 56677799999998762 46677664
No 471
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=38.28 E-value=80 Score=27.33 Aligned_cols=45 Identities=20% Similarity=0.221 Sum_probs=31.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAEL 79 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~Ga~v 79 (285)
+++.-..|.-|.++|..++.+|.+++++-+ ++.+++.++. +|+++
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~~~~~~g~~~ 213 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQYLDDVFGGRV 213 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHhcCceE
Confidence 444444599999999999999997666533 3455555544 77764
No 472
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=38.21 E-value=76 Score=25.68 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=28.7
Q ss_pred HHHHHhhhCCCCCEEEEccCCcccHHHHHHHHHhhC-CCcEEEEEe
Q 023227 125 GPELWKGSGGRIDALVSGIGTGGTITGAGKFLKEKN-PNIKLYGIE 169 (285)
Q Consensus 125 ~~EI~~q~~~~~d~iv~~vG~Gg~~aGi~~~~k~~~-~~~~vigv~ 169 (285)
..+++++- +.||+||+. +..++.|+..++++.+ .++.|+|.+
T Consensus 182 ~~~ll~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~dv~vig~d 224 (290)
T 2fn9_A 182 TEQILQAH-PEIKAIWCG--NDAMALGAMKACEAAGRTDIYIFGFD 224 (290)
T ss_dssp HHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHTTCTTCEEECCB
T ss_pred HHHHHHhC-CCCcEEEEC--CchHHHHHHHHHHHCCCCCeEEEEeC
Confidence 34444442 468999975 5667789999998876 367777664
No 473
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.06 E-value=84 Score=26.85 Aligned_cols=52 Identities=19% Similarity=0.165 Sum_probs=36.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc-CCEEEEeC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAF-GAELVLTD 83 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~-Ga~v~~~~ 83 (285)
+.+|+..+|.-|.+++......|.+++++....... +...+... +.+++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~l~~~~~v~~v~~D 59 (352)
T 1xgk_A 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL-IAEELQAIPNVTLFQGP 59 (352)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH-HHHHHHTSTTEEEEESC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh-hHHHHhhcCCcEEEECC
Confidence 578999999999999999888899988887654332 22333333 55665555
No 474
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.93 E-value=1e+02 Score=21.58 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=30.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR-AFGAELVL 81 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~-~~Ga~v~~ 81 (285)
++....|+.|..+|......|.+++++-+ ++.+.+.++ .+|.+++.
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~ 53 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVIN 53 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEEE
Confidence 44446799999999998888988777643 234444444 24555433
No 475
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=37.84 E-value=36 Score=29.25 Aligned_cols=29 Identities=17% Similarity=0.005 Sum_probs=26.1
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITM 60 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~ 60 (285)
.|+...+|-.|.++|...++.|++++||=
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 37778999999999999999999999983
No 476
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=37.77 E-value=78 Score=27.56 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=32.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRA-FGAEL 79 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~-~Ga~v 79 (285)
++|+.-..|+-|.++|..++.+|.+++++-+ ++.+++.++. +|+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~~~~~~g~~~ 215 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQLDAEFCGRI 215 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHHHhcCCee
Confidence 3555556699999999999999997555532 3456655554 78764
No 477
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=37.77 E-value=73 Score=25.16 Aligned_cols=51 Identities=16% Similarity=0.099 Sum_probs=35.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH--HcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILR--AFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~--~~Ga~v~~~~~ 84 (285)
..|||..+|--|.++|......|.+++++... ..+...+. ..+.+++.++-
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~ 61 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLVSLAKECPGIEPVCVDL 61 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHSTTCEEEECCT
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhccCCCcEEecC
Confidence 68899999999999999999999987776543 23333222 23667765554
No 478
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=37.71 E-value=1e+02 Score=27.82 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=61.0
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
+..-.| ++++....|+-|+++|..++.+|.+++++=+ .+.+.......|.++. + ++ ++.++-
T Consensus 242 g~~L~G-KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~---dp~~a~~A~~~G~~vv--~----Le-------ElL~~A- 303 (464)
T 3n58_A 242 DVMMAG-KVAVVCGYGDVGKGSAQSLAGAGARVKVTEV---DPICALQAAMDGFEVV--T----LD-------DAASTA- 303 (464)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCEEC--C----HH-------HHGGGC-
T ss_pred CCcccC-CEEEEECcCHHHHHHHHHHHHCCCEEEEEeC---CcchhhHHHhcCceec--c----HH-------HHHhhC-
Confidence 333344 6788899999999999999999998666522 3344444456787652 2 22 222332
Q ss_pred CeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCccc
Q 023227 104 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 148 (285)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~ 148 (285)
+.+.... .+ ...+..|.++++ ++..|++-+|.|..
T Consensus 304 DIVv~at-gt-------~~lI~~e~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 304 DIVVTTT-GN-------KDVITIDHMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp SEEEECC-SS-------SSSBCHHHHHHS--CTTEEEEECSSSTT
T ss_pred CEEEECC-CC-------ccccCHHHHhcC--CCCeEEEEcCCCCc
Confidence 4444321 11 123456777887 47899999998874
No 479
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=37.70 E-value=83 Score=27.45 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=28.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
+.++.-.+|+.|.-+|...+.+|.+++++.+..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 457777899999999999999999999987653
No 480
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=37.68 E-value=75 Score=22.86 Aligned_cols=49 Identities=16% Similarity=0.055 Sum_probs=22.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV 80 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~ 80 (285)
.++.+.-..+...+.-.|..+|.+.+++-+...+++-.+..+.+|.+++
T Consensus 61 lavi~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 61 TVTLYINPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp EEEECSCHHHHGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred EEEEEeCHHHHHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEE
Confidence 3444444444444444455555555443333334444444455555444
No 481
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=37.63 E-value=1.3e+02 Score=25.82 Aligned_cols=102 Identities=16% Similarity=0.080 Sum_probs=62.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQ 110 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 110 (285)
++|..-.-|+-|.++|..++.+|++++.+=+...+ .. ..+. ..+ +. .++.++- +...+.-
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-----~~-~~~~--~~~----~l-------~ell~~a-DvV~l~~ 208 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-----EF-EPFL--TYT----DF-------DTVLKEA-DIVSLHT 208 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-----GG-TTTC--EEC----CH-------HHHHHHC-SEEEECC
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-----hh-hccc--ccc----CH-------HHHHhcC-CEEEEcC
Confidence 46777788999999999999999998887554322 01 1122 111 12 2333443 4444433
Q ss_pred CCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCcccH--HHHHHHHHh
Q 023227 111 FENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGTI--TGAGKFLKE 158 (285)
Q Consensus 111 ~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~~--aGi~~~~k~ 158 (285)
-.++.. +.-+..+.++++ +++.+++-+|.|+.. ..+..+++.
T Consensus 209 Plt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 252 (343)
T 2yq5_A 209 PLFPST----ENMIGEKQLKEM--KKSAYLINCARGELVDTGALIKALQD 252 (343)
T ss_dssp CCCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCCHHH----HHHhhHHHHhhC--CCCcEEEECCCChhhhHHHHHHHHHc
Confidence 222222 123445777887 478999999999865 345556654
No 482
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=37.54 E-value=92 Score=25.12 Aligned_cols=32 Identities=13% Similarity=0.045 Sum_probs=27.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|.-|+++|......|.+++++...
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence 67899999999999999999999998776543
No 483
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=37.48 E-value=89 Score=25.75 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=34.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
+.+|++.+|.-|..++......|.+++++... ..... ++ +.+++..+-
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~---~~--~~~~~~~Dl 51 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA---IN--DYEYRVSDY 51 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC----------CCEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc---CC--ceEEEEccc
Confidence 67899999999999999999999999888776 22222 22 666655553
No 484
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=37.42 E-value=1e+02 Score=25.96 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=34.1
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 78 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~ 78 (285)
.|..-..|+.|.++|......|.+++++ +.++.+.+.+...|++
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~l~~~g~~ 76 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVW---NRTPARAASLAALGAT 76 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHTTTCE
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHCCCE
Confidence 5666688999999999999999998776 3345677777666654
No 485
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=37.34 E-value=58 Score=29.13 Aligned_cols=52 Identities=8% Similarity=-0.048 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 11 RIGYSMISDAEA-KGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 11 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
||+.+.+..+.+ .|. +....+|+....||-|..+|.....+|.+++.+...+
T Consensus 193 ~Gv~~~~~~~~~~~g~-~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 193 FGVAVVVRESAKRFGI-KMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHTTC-CGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred HHHHHHHHHHHHhcCC-CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 677777777654 343 3223568888899999999999999998888776554
No 486
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=37.23 E-value=53 Score=27.44 Aligned_cols=36 Identities=25% Similarity=0.258 Sum_probs=29.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 28 PGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 28 ~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
|+.+.+||+.+|.-|.+++......|.+++++....
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCC
Confidence 445789999999999999999888999988887653
No 487
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=37.21 E-value=1.2e+02 Score=25.59 Aligned_cols=51 Identities=12% Similarity=0.123 Sum_probs=31.6
Q ss_pred EEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAA-KQYRLIITMPASMSLERRIILRAFGAELVLTDP 84 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~-~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~ 84 (285)
.|+..++|..+..++..+-. -|- .|+++...-......++.+|++++.++.
T Consensus 92 ~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 143 (388)
T 1j32_A 92 NILVTNGGKQSIFNLMLAMIEPGD--EVIIPAPFWVSYPEMVKLAEGTPVILPT 143 (388)
T ss_dssp GEEEESHHHHHHHHHHHHHCCTTC--EEEEESSCCTHHHHHHHHTTCEEEEECC
T ss_pred hEEEcCCHHHHHHHHHHHhcCCCC--EEEEcCCCChhHHHHHHHcCCEEEEecC
Confidence 46666777777777766542 242 3444443333445667889999988875
No 488
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=37.15 E-value=1.3e+02 Score=24.38 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=43.1
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC-CeEe-cCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccC
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP-NAYM-LQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIG 144 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~-~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG 144 (285)
.-.+.+...|++|+.++.. .+...+..+++.++.+ ...+ .....++ .....+..++.++. +.+|.+|..+|
T Consensus 35 aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~----~~v~~~~~~~~~~~-g~id~lv~nAg 107 (266)
T 4egf_A 35 DIARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTVAIDLAEP----DAPAELARRAAEAF-GGLDVLVNNAG 107 (266)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEEECCTTST----THHHHHHHHHHHHH-TSCSEEEEECC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEEEecCCCH----HHHHHHHHHHHHHc-CCCCEEEECCC
Confidence 4566677889999999863 2333334444443222 2222 2222232 23355666777777 57999999998
Q ss_pred Ccc
Q 023227 145 TGG 147 (285)
Q Consensus 145 ~Gg 147 (285)
...
T Consensus 108 ~~~ 110 (266)
T 4egf_A 108 ISH 110 (266)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 489
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=37.06 E-value=1.4e+02 Score=22.92 Aligned_cols=58 Identities=16% Similarity=0.079 Sum_probs=37.3
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHH-HHHHHHHHcCCeEEEEecC--CCCH----HHHHHHHHcCCEEE
Q 023227 19 DAEAKGLITPGESVLIEPTSGNTGI-GLAFMAAAKQYRLIITMPA--SMSL----ERRIILRAFGAELV 80 (285)
Q Consensus 19 ~a~~~g~~~~g~~~vv~~ssGN~g~-a~A~~a~~~G~~~~iv~p~--~~~~----~~~~~~~~~Ga~v~ 80 (285)
..+++|. ...++++-..+.+. ++|.-+..+|++++++... ..++ .-++.|+..|++|+
T Consensus 119 ~L~~~gi----~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 119 WLRQRGV----DEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhcCC----CEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 3344555 24556665566654 5666688899999988654 2222 24778888998875
No 490
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=37.05 E-value=37 Score=27.07 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=26.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 33 LIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 33 vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
|+.-.+|..|..+|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 677889999999999999999999998654
No 491
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=36.89 E-value=1.1e+02 Score=27.40 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=36.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC-----CHHHHHHHHHcCCEEEEe
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYR-LIITMPASM-----SLERRIILRAFGAELVLT 82 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~-~~iv~p~~~-----~~~~~~~~~~~Ga~v~~~ 82 (285)
+.|+.-.+||.|.-+|..+.++|.+ ++++.+... ....+..++..|.+++.-
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~ 322 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQ 322 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEECC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEeC
Confidence 4677789999999999999999985 777765432 233355566667665543
No 492
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=36.88 E-value=64 Score=27.26 Aligned_cols=51 Identities=10% Similarity=0.019 Sum_probs=32.4
Q ss_pred EEEeeCCChHHHHHHHHHHH-----cCCeEEEEecCCCCHHH---HHHHHHcCCEEEEeCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAA-----KQYRLIITMPASMSLER---RIILRAFGAELVLTDP 84 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~-----~G~~~~iv~p~~~~~~~---~~~~~~~Ga~v~~~~~ 84 (285)
.++..++|..+..++..+-. -| -.|+++...-... ...++..|++++.++.
T Consensus 63 ~v~~~~g~t~a~~~~~~~~~~~~~~~g--d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 63 EIFFTSCATESINWILKTVAETFEKRK--RTIITTPIEHKAVLETMKYLSMKGFKVKYVPV 121 (384)
T ss_dssp GEEEESCHHHHHHHHHHHHHHHTTTTC--CEEEECTTSCHHHHHHHHHHHHTTCEEEECCB
T ss_pred eEEEECCHHHHHHHHHHhhhhhccCCC--CEEEECCCCchHHHHHHHHHHhcCCEEEEEcc
Confidence 46777777777777766554 34 3455555444433 2334788999999875
No 493
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.57 E-value=65 Score=26.21 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=27.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|......|.+++++...
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67889999999999999998999987776543
No 494
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=36.33 E-value=1.5e+02 Score=24.14 Aligned_cols=84 Identities=20% Similarity=0.145 Sum_probs=50.3
Q ss_pred eEEEEecCC----CCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHh
Q 023227 55 RLIITMPAS----MSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK 130 (285)
Q Consensus 55 ~~~iv~p~~----~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~ 130 (285)
+.++|.-.. .-..-.+.+...|++|+.++... ..+..+++.++.+...++ +. |..+ ......+..++.+
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~l~~~~~~~~~~-~~-Dl~~-~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ----FKDRVEKLCAEFNPAAVL-PC-DVIS-DQEIKDLFVELGK 99 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT----CHHHHHHHHGGGCCSEEE-EC-CTTC-HHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch----HHHHHHHHHHhcCCceEE-Ee-ecCC-HHHHHHHHHHHHH
Confidence 455665532 22455677778899999988642 223445555554332222 11 2233 3445666677777
Q ss_pred hhCCCCCEEEEccCCc
Q 023227 131 GSGGRIDALVSGIGTG 146 (285)
Q Consensus 131 q~~~~~d~iv~~vG~G 146 (285)
+. +.+|.+|..+|..
T Consensus 100 ~~-g~id~li~nAg~~ 114 (280)
T 3nrc_A 100 VW-DGLDAIVHSIAFA 114 (280)
T ss_dssp HC-SSCCEEEECCCCC
T ss_pred Hc-CCCCEEEECCccC
Confidence 76 5799999999875
No 495
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=36.15 E-value=1.2e+02 Score=27.28 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=59.0
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCC
Q 023227 24 GLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTP 103 (285)
Q Consensus 24 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 103 (285)
+..-.| ++++....|+-|+++|..++.+|.+++++ . .++.+.......|.++. ++++ +.++-
T Consensus 215 ~~~L~G-ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~-D--~dp~ra~~A~~~G~~v~------~Lee-------al~~A- 276 (435)
T 3gvp_A 215 DMMFGG-KQVVVCGYGEVGKGCCAALKAMGSIVYVT-E--IDPICALQACMDGFRLV------KLNE-------VIRQV- 276 (435)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHTTCEEEEE-C--SCHHHHHHHHHTTCEEC------CHHH-------HTTTC-
T ss_pred CceecC-CEEEEEeeCHHHHHHHHHHHHCCCEEEEE-e--CChhhhHHHHHcCCEec------cHHH-------HHhcC-
Confidence 333344 67888999999999999999999985554 2 23445545566776542 1222 22222
Q ss_pred CeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCccc
Q 023227 104 NAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTGGT 148 (285)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~Gg~ 148 (285)
+.+.... .++ ..+..|.++++ +++.+++-+|.|..
T Consensus 277 DIVi~at-gt~-------~lI~~e~l~~M--K~gailINvgrg~~ 311 (435)
T 3gvp_A 277 DIVITCT-GNK-------NVVTREHLDRM--KNSCIVCNMGHSNT 311 (435)
T ss_dssp SEEEECS-SCS-------CSBCHHHHHHS--CTTEEEEECSSTTT
T ss_pred CEEEECC-CCc-------ccCCHHHHHhc--CCCcEEEEecCCCc
Confidence 4444321 111 23445677777 36789999988764
No 496
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=36.06 E-value=91 Score=25.25 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=28.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPA 62 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~ 62 (285)
..|||..+|--|.++|..-...|.+++++-..
T Consensus 30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999998887654
No 497
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=36.05 E-value=1.1e+02 Score=27.85 Aligned_cols=46 Identities=20% Similarity=0.208 Sum_probs=33.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 023227 31 SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL 79 (285)
Q Consensus 31 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~v 79 (285)
++++....|.-|+++|...+.+|.+++++ +.++.+.......|.++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~---D~~~~~a~~Aa~~g~dv 311 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVT---EIDPICALQATMEGLQV 311 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEE---cCCHHHHHHHHHhCCcc
Confidence 45555566799999999999999976654 23456666666778754
No 498
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.01 E-value=56 Score=24.46 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=27.9
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPAS 63 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 63 (285)
.++.-.+|..|..+|...++.|.+++++-+..
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46778899999999999999999999997653
No 499
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=35.75 E-value=1.7e+02 Score=23.42 Aligned_cols=76 Identities=17% Similarity=0.171 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhCCCeEecCCCCCCCchHhHHhchHHHHHhhhCCCCCEEEEccCCc
Q 023227 67 ERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSGIGTG 146 (285)
Q Consensus 67 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~~d~iv~~vG~G 146 (285)
.-.+.+...|++|+.+..... ....+..+++.++.+......+. |... ......+..++.++. +.+|.+|..+|..
T Consensus 37 ~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~-Dl~~-~~~v~~~~~~~~~~~-g~id~li~nAg~~ 112 (267)
T 3gdg_A 37 EAARGCAEMGAAVAITYASRA-QGAEENVKELEKTYGIKAKAYKC-QVDS-YESCEKLVKDVVADF-GQIDAFIANAGAT 112 (267)
T ss_dssp HHHHHHHHTSCEEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBC-CTTC-HHHHHHHHHHHHHHT-SCCSEEEECCCCC
T ss_pred HHHHHHHHCCCeEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEec-CCCC-HHHHHHHHHHHHHHc-CCCCEEEECCCcC
Confidence 446677788999998875321 12234445554443333333232 2233 344566677787777 5799999998864
No 500
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=35.65 E-value=1e+02 Score=25.48 Aligned_cols=44 Identities=20% Similarity=0.061 Sum_probs=34.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 023227 32 VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAE 78 (285)
Q Consensus 32 ~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~~~~~~~~~Ga~ 78 (285)
.|..-..|+.|.++|......|.+++++ +.++.+.+.++..|..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~---d~~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVF---DLVQSAVDGLVAAGAS 48 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEE---CSSHHHHHHHHHTTCE
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHCCCe
Confidence 4556688999999999999999988777 3346677777777754
Done!