Citrus Sinensis ID: 023239

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
cccHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccc
ccHHHHHHHHHHccHHHHHcccHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccc
MQTEARVGVVVeggqrglssgngsvsvdKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAhrlpyssvnfYAYEHYKKLLHAIPvvesqgenmssDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGatllgvgpsiAISFSVYETLRSFWQsrrqndspvLVSLACGslsgiasstetEDVGLALHQVFNQSDPY
mqtearvgvvveggqrglssgngSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQvfnqsdpy
MQTEArvgvvveggqrgLSSGNGSVSVDKITLqqqqkqmlqnqsqIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
*********************************************IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIA*******VGLALH*********
***EARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQG***********SIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQ****
MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQ**********SQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
*QTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query285 2.2.26 [Sep-21-2011]
Q54MZ4434 Mitochondrial substrate c yes no 0.821 0.539 0.367 3e-36
Q6NUK1477 Calcium-binding mitochond yes no 0.687 0.410 0.408 1e-35
Q8BMD8475 Calcium-binding mitochond yes no 0.677 0.406 0.406 5e-34
A5PJZ1477 Calcium-binding mitochond yes no 0.687 0.410 0.403 6e-34
O18757475 Calcium-binding mitochond yes no 0.680 0.408 0.399 9e-33
O04619352 Mitochondrial adenine nuc no no 0.740 0.599 0.372 3e-32
Q5XHA0473 Calcium-binding mitochond no no 0.687 0.414 0.369 2e-31
Q7T0U6473 Calcium-binding mitochond N/A no 0.687 0.414 0.364 5e-31
Q7ZYD5514 Calcium-binding mitochond N/A no 0.733 0.406 0.357 5e-31
Q7ZY36473 Calcium-binding mitochond N/A no 0.687 0.414 0.359 8e-31
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function desciption
 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 32  LQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMH--SDTATLR 89
           LQ   K ++   + + +   LL+GGVAGA+S+TCT+PL RL IL QV  M+   +    +
Sbjct: 122 LQYSTKPIVHAPADVPSWKLLLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYK 181

Query: 90  KASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGE 149
              I +    + + EGF  F+KGN   +    PYS++ F +YE YK  L       +  +
Sbjct: 182 GRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLL------NNND 235

Query: 150 NMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIW 209
                 + +   GG AG+T+   TYPLDL+R+RL  Q     Y GI    + I R+EG+ 
Sbjct: 236 QTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVA 295

Query: 210 GLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLV-SLACGSLSGIASSTET 268
           GLYKGL A+ LGV P +AI+F+ YE L+  +  +  + +P +V SL  G++SG  + T T
Sbjct: 296 GLYKGLFASALGVAPYVAINFTTYENLKKTFIPK--DTTPTVVQSLTFGAISGATAQTLT 353

Query: 269 EDVGL 273
             + L
Sbjct: 354 YPIDL 358
Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZYD5|SCMC2_XENLA Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
296086165277 unnamed protein product [Vitis vinifera] 0.964 0.992 0.798 1e-120
225449356346 PREDICTED: mitochondrial substrate carri 0.954 0.786 0.8 1e-118
449464462348 PREDICTED: mitochondrial substrate carri 0.957 0.784 0.770 1e-112
224109442337 predicted protein [Populus trichocarpa] 0.915 0.774 0.775 1e-111
449448592349 PREDICTED: mitochondrial substrate carri 0.954 0.779 0.750 1e-111
449516015349 PREDICTED: mitochondrial substrate carri 0.954 0.779 0.747 1e-110
118481007267 unknown [Populus trichocarpa] 0.926 0.988 0.759 1e-110
224101051337 predicted protein [Populus trichocarpa] 0.915 0.774 0.764 1e-109
225440510336 PREDICTED: mitochondrial substrate carri 0.922 0.782 0.740 1e-107
255566518248 Mitochondrial deoxynucleotide carrier, p 0.863 0.991 0.759 1e-106
>gi|296086165|emb|CBI31606.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/278 (79%), Positives = 239/278 (85%), Gaps = 3/278 (1%)

Query: 1   MQTEARVGVVVEGGQRGLSSGNGSVSVDKIT--LQQQQKQMLQNQSQIGTISQLLAGGVA 58
           MQTEARVGVVVEGGQR L+SG+G V+VD     L QQQK + Q QSQIGTI QLLAGG+A
Sbjct: 1   MQTEARVGVVVEGGQRALNSGHGGVAVDGTARKLAQQQKSLHQ-QSQIGTIPQLLAGGIA 59

Query: 59  GALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIA 118
           GALSKTCTAPLARLTILFQVQGMHSD ATL KASIW+EASRII EEGFRAFWKGNLVTIA
Sbjct: 60  GALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGEEGFRAFWKGNLVTIA 119

Query: 119 HRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDL 178
           HRLPYSSV+FYAYE YK +LH +P +ES   N S+DL VHFV+GGLAG+TAAS TYPLDL
Sbjct: 120 HRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGGLAGLTAASATYPLDL 179

Query: 179 VRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRS 238
           VRTRLAAQT VIYYRGI H LQTI R+EGIWGLYKGLGATLLGVGPSIAI+FSVYETLRS
Sbjct: 180 VRTRLAAQTKVIYYRGIGHTLQTIVREEGIWGLYKGLGATLLGVGPSIAINFSVYETLRS 239

Query: 239 FWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALH 276
            W S+R NDS VLVSL CGSLSGIASSTE +D    LH
Sbjct: 240 SWHSQRPNDSTVLVSLTCGSLSGIASSTEKQDEVQDLH 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225449356|ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449464462|ref|XP_004149948.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] gi|449513191|ref|XP_004164257.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224109442|ref|XP_002315196.1| predicted protein [Populus trichocarpa] gi|222864236|gb|EEF01367.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448592|ref|XP_004142050.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516015|ref|XP_004165043.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|118481007|gb|ABK92457.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101051|ref|XP_002312122.1| predicted protein [Populus trichocarpa] gi|222851942|gb|EEE89489.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225440510|ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297740295|emb|CBI30477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255566518|ref|XP_002524244.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223536521|gb|EEF38168.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
TAIR|locus:2078951332 AT3G55640 [Arabidopsis thalian 0.782 0.671 0.762 1.4e-87
TAIR|locus:2084460365 AT3G53940 [Arabidopsis thalian 0.778 0.608 0.720 8e-85
TAIR|locus:2065598337 AT2G37890 [Arabidopsis thalian 0.8 0.676 0.662 4.8e-78
UNIPROTKB|Q6NUK1477 SLC25A24 "Calcium-binding mito 0.684 0.408 0.411 3.6e-34
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.750 0.493 0.408 4.6e-34
UNIPROTKB|F6Q4L6416 SLC25A24 "Uncharacterized prot 0.684 0.468 0.406 2.5e-33
UNIPROTKB|F1PEX8397 SLC25A24 "Uncharacterized prot 0.684 0.491 0.401 3.2e-33
MGI|MGI:1917160475 Slc25a24 "solute carrier famil 0.677 0.406 0.406 8.5e-33
UNIPROTKB|A5PJZ1477 SLC25A24 "Calcium-binding mito 0.684 0.408 0.406 1.1e-32
RGD|1311982475 Slc25a24 "solute carrier famil 0.677 0.406 0.401 2.9e-32
TAIR|locus:2078951 AT3G55640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 170/223 (76%), Positives = 195/223 (87%)

Query:    46 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEG 105
             I + SQLLAGG+AGA SKTCTAPL+RLTILFQVQGMH++ A LRK SI  EASRI++EEG
Sbjct:    32 IESASQLLAGGLAGAFSKTCTAPLSRLTILFQVQGMHTNAAALRKPSILHEASRILNEEG 91

Query:   106 FRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLA 165
              +AFWKGNLVTIAHRLPYSSVNFYAYEHYKK ++ +  +E+  E +SS+LFVHFV+GGLA
Sbjct:    92 LKAFWKGNLVTIAHRLPYSSVNFYAYEHYKKFMYMVTGMENHKEGISSNLFVHFVAGGLA 151

Query:   166 GITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPS 225
             GITAAS TYPLDLVRTRLAAQT VIYY GI H L++I  DEGI GLYKGLG TL+GVGPS
Sbjct:   152 GITAASATYPLDLVRTRLAAQTKVIYYSGIWHTLRSITTDEGILGLYKGLGTTLVGVGPS 211

Query:   226 IAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTET 268
             IAISFSVYE+LRS+W+S R +DSP++VSLACGSLSGIASST T
Sbjct:   212 IAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTAT 254
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2084460 AT3G53940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065598 AT2G37890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NUK1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEX8 SLC25A24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJZ1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018399001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (346 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 7e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 155 LFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNV--IYYRGICHALQTICRDEGIWGLY 212
                ++GG+AG  AA+VTYPLD+V+TRL +        Y+GI    + I ++EGI GLY
Sbjct: 5   FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 213 KGLGATLLGVGPSIAISFSVYETLRSFWQSR 243
           KGL   LL V P+ AI F  YETL+     +
Sbjct: 65  KGLLPNLLRVAPAAAIYFGTYETLKKLLLKK 95

Length = 96
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 285
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.98
KOG0766297 consensus Predicted mitochondrial carrier protein 99.98
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.98
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0769308 consensus Predicted mitochondrial carrier protein 99.96
KOG1519297 consensus Predicted mitochondrial carrier protein 99.81
KOG2745321 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
KOG1519297 consensus Predicted mitochondrial carrier protein 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG2745321 consensus Mitochondrial carrier protein [General f 99.65
KOG2954427 consensus Mitochondrial carrier protein [General f 99.56
KOG2954427 consensus Mitochondrial carrier protein [General f 98.45
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1e-46  Score=317.29  Aligned_cols=230  Identities=43%  Similarity=0.680  Sum_probs=207.4

Q ss_pred             chhHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcCCCCcccccccccHHHHHHHHHhhhhhhhhhhchhhhhhccchhhh
Q 023239           46 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSS  125 (285)
Q Consensus        46 ~~~~~~~~~g~~a~~~~~~i~~Pld~vk~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~  125 (285)
                      ....+.+++|++||+++..++.|+|++|+|+|++...  .+..++.|.++.+++|+++||++|||||-.+.+++.+|+.+
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~--~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~a  102 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP--SKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGA  102 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEecccc--ccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecch
Confidence            3667889999999999999999999999999999865  34567889999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHhcCCcccccCCCCchhhHHHHHhhhHHHHHHHHhhccHHHHHHHHHhccCccccccHHHHHHHHHHh
Q 023239          126 VNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRD  205 (285)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~~~~~~~~~~~~~~i~~~  205 (285)
                      ++|..||..++......      .....++..+++||++||.++++++||+|++|+|+-.+.....|+++.+++++||++
T Consensus       103 vqf~aye~~k~~~~~~~------~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~  176 (320)
T KOG0752|consen  103 VQFSAYEQYKKLVLGVD------PNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYRE  176 (320)
T ss_pred             hhhhHHHHhhhhhhccC------cccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHh
Confidence            99999999998643321      111568889999999999999999999999999999988777899999999999999


Q ss_pred             hCccccccchhHhhhhhhhhHHHHHHHHHHHHH-HHhccCC-CCchhHHHHHhHHHHhHhhhcccchHHHHHHHhccCCC
Q 023239          206 EGIWGLYKGLGATLLGVGPSIAISFSVYETLRS-FWQSRRQ-NDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSD  283 (285)
Q Consensus       206 ~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~k~-~~~~~~~-~~~~~~~~~~~~~~a~~~a~~~~~p~~~~r~~~~~~~~  283 (285)
                      ||++|||||+.|++++.+|+.++.|..||.+|+ .+.+..+ ++.+.+..+.||++||++++++|||+|.+|.|||....
T Consensus       177 eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~  256 (320)
T KOG0752|consen  177 EGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGL  256 (320)
T ss_pred             cchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCc
Confidence            999999999999999999999999999999999 5444443 46688999999999999999999999999999998764

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-22
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-12
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 49  ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFR 107
           +   LAGGVA A+SKT  AP+ R+ +L QVQ      +A  +   I     RI  E+GF 
Sbjct: 8   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 108 AFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHF----VSGG 163
           +FW+GNL  +    P  ++NF   + YK++          G +     + +F     SGG
Sbjct: 68  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG-------GVDRHKQFWRYFAGNLASGG 120
Query: 164 LAGITAASVTYPLDLVRTRLAAQTNV----IYYRGICHALQTICRDEGIWGLYKGLGATL 219
            AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G   ++
Sbjct: 121 AAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSV 180
Query: 220 LGVGPSIAISFSVYETLR 237
            G+    A  F VY+T +
Sbjct: 181 QGIIIYRAAYFGVYDTAK 198
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-84
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-42
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-12
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-33
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  254 bits (652), Expect = 1e-84
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 10/230 (4%)

Query: 42  NQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRI 100
           +   +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI
Sbjct: 1   SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 60

Query: 101 ISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFV 160
             E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  
Sbjct: 61  PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW---RYFAGNLA 117

Query: 161 SGGLAGITAASVTYPLDLVRTRLAAQTNVI----YYRGICHALQTICRDEGIWGLYKGLG 216
           SGG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G  
Sbjct: 118 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 177

Query: 217 ATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASST 266
            ++ G+    A  F VY+T +         +  ++VS          +  
Sbjct: 178 VSVQGIIIYRAAYFGVYDTAKGMLP--DPKNVHIIVSWMIAQTVTAVAGL 225
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=5e-44  Score=308.28  Aligned_cols=233  Identities=29%  Similarity=0.473  Sum_probs=200.4

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcCCCCc-ccccccccHHHHHHHHHhhhhhhhhhhchhhhhhccchh
Q 023239           45 QIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPY  123 (285)
Q Consensus        45 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~r~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  123 (285)
                      ..+....+++|++|++++.++++|+|++|+|+|++..... ....+|++.++++++++++||++|||||+.+++++.+++
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~   83 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   83 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence            3466789999999999999999999999999999864321 124468999999999999999999999999999999999


Q ss_pred             hhHHHHhHHHHHHHHhcCCcccccCCCCchhhHHHHHhhhHHHHHHHHhhccHHHHHHHHHhccC----ccccccHHHHH
Q 023239          124 SSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHAL  199 (285)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~----~~~~~~~~~~~  199 (285)
                      .+++|.+||.+|+.+.....   ............+++|++||++++++++|+|+||+|+|.+..    ..+|.++++++
T Consensus        84 ~~~~f~~ye~~k~~~~~~~~---~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~  160 (297)
T 1okc_A           84 QALNFAFKDKYKQIFLGGVD---RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI  160 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC---TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccC---cccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHH
Confidence            99999999999996543211   111112345678999999999999999999999999999853    34689999999


Q ss_pred             HHHHHhhCccccccchhHhhhhhhhhHHHHHHHHHHHHHHHhccCCCCchhHHHHHhHHHHhHhhhcccchHHHHHHHhc
Q 023239          200 QTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVF  279 (285)
Q Consensus       200 ~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~r~~~~  279 (285)
                      ++++++||++|||||+.+++++.+|+.+++|.+||.+|+.+.+.  .+.+.+..+++|++||++++++++|+|++|+|+|
T Consensus       161 ~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~--~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q  238 (297)
T 1okc_A          161 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM  238 (297)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC--CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence            99999999999999999999999999999999999999977543  2345688899999999999999999999999998


Q ss_pred             cCC
Q 023239          280 NQS  282 (285)
Q Consensus       280 ~~~  282 (285)
                      .+.
T Consensus       239 ~~~  241 (297)
T 1okc_A          239 MQS  241 (297)
T ss_dssp             TTT
T ss_pred             hcC
Confidence            764
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 285
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 94.0 bits (232), Expect = 4e-23
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 8/213 (3%)

Query: 43  QSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRII 101
              +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI 
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 60

Query: 102 SEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVS 161
            E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  S
Sbjct: 61  KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRY---FAGNLAS 117

Query: 162 GGLAGITAASVTYPLDLVRTRLAAQTNVIY----YRGICHALQTICRDEGIWGLYKGLGA 217
           GG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G   
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNV 177

Query: 218 TLLGVGPSIAISFSVYETLRSFWQSRRQNDSPV 250
           ++ G+    A  F VY+T +      +     V
Sbjct: 178 SVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV 210
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=2.1e-40  Score=282.81  Aligned_cols=235  Identities=29%  Similarity=0.464  Sum_probs=206.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHhhhccHHHHHHHHHhcCCCCc-ccccccccHHHHHHHHHhhhhhhhhhhchhhhhhccch
Q 023239           44 SQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLP  122 (285)
Q Consensus        44 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~r~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~  122 (285)
                      ...++.+.+++|++|++++.+++||||+||+|+|+++.... .....+++.++++++++++||+++||||+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            34678899999999999999999999999999999876442 23567899999999999999999999999999999999


Q ss_pred             hhhHHHHhHHHHHHHHhcCCcccccCCCCchhhHHHHHhhhHHHHHHHHhhccHHHHHHHHHhccC----ccccccHHHH
Q 023239          123 YSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHA  198 (285)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~P~d~ik~r~q~~~~----~~~~~~~~~~  198 (285)
                      +..++|.+||.+++.+.+....   .++........+++|.+|++++.++++|+|++|+|+|.+..    ...+.+..++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~  158 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDR---HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCT---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHH
T ss_pred             ccchhHHHHHHHHHHHhccccc---ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHH
Confidence            9999999999999998764321   22333456677889999999999999999999999998854    3467899999


Q ss_pred             HHHHHHhhCccccccchhHhhhhhhhhHHHHHHHHHHHHHHHhccCCCCchhHHHHHhHHHHhHhhhcccchHHHHHHHh
Q 023239          199 LQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQV  278 (285)
Q Consensus       199 ~~~i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~p~~~~r~~~  278 (285)
                      +++++++||+++||+|+.+++++.+++.+++|..||.+|+.+.+.  ...+....+.++.+++++++++++|+|++|+|+
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~  236 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  236 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--cccchHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence            999999999999999999999999999999999999999977553  344568889999999999999999999999999


Q ss_pred             ccCCC
Q 023239          279 FNQSD  283 (285)
Q Consensus       279 ~~~~~  283 (285)
                      |.++.
T Consensus       237 q~~~~  241 (292)
T d1okca_         237 MMQSG  241 (292)
T ss_dssp             HTTTT
T ss_pred             HhcCC
Confidence            98764
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure