Query         023242
Match_columns 285
No_of_seqs    259 out of 1348
Neff          5.0 
Searched_HMMs 29240
Date          Mon Mar 25 03:30:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023242hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2ej7_A HCG3 gene; HCG3 protein  99.5 7.9E-14 2.7E-18  105.8   6.9   70   56-127     1-77  (82)
  2 2guz_A Mitochondrial import in  99.4 3.5E-14 1.2E-18  106.0   3.4   61   57-117     7-70  (71)
  3 2dn9_A DNAJ homolog subfamily   99.4 2.4E-13 8.3E-18  102.4   7.0   66   60-127     3-74  (79)
  4 2och_A Hypothetical protein DN  99.4 1.7E-13 5.7E-18  102.2   6.0   64   61-126     5-71  (73)
  5 2yua_A Williams-beuren syndrom  99.4 2.4E-13 8.1E-18  107.2   6.8   66   56-121     9-80  (99)
  6 2ctp_A DNAJ homolog subfamily   99.4 2.2E-13 7.5E-18  102.6   6.1   65   61-127     4-73  (78)
  7 2o37_A Protein SIS1; HSP40, J-  99.4 2.1E-13   7E-18  106.3   5.0   64   61-126     5-71  (92)
  8 2ctw_A DNAJ homolog subfamily   99.4 2.6E-13   9E-18  108.9   5.4   69   59-129    12-86  (109)
  9 2dmx_A DNAJ homolog subfamily   99.4 3.8E-13 1.3E-17  104.3   5.9   69   57-127     2-77  (92)
 10 2ctr_A DNAJ homolog subfamily   99.4 4.7E-13 1.6E-17  103.3   6.1   61   61-121     4-69  (88)
 11 1hdj_A Human HSP40, HDJ-1; mol  99.4 5.8E-13   2E-17  100.0   6.1   63   63-127     2-69  (77)
 12 2cug_A Mkiaa0962 protein; DNAJ  99.4 7.7E-13 2.6E-17  102.1   6.9   65   61-127    14-83  (88)
 13 2ys8_A RAB-related GTP-binding  99.4 2.6E-13 8.8E-18  105.5   3.9   55   63-117    26-85  (90)
 14 1wjz_A 1700030A21RIK protein;   99.4 3.5E-13 1.2E-17  104.5   4.7   63   59-121    11-85  (94)
 15 1faf_A Large T antigen; J doma  99.3 6.8E-13 2.3E-17  101.1   5.4   58   63-120    10-71  (79)
 16 2ctq_A DNAJ homolog subfamily   99.3 3.9E-12 1.3E-16  102.4   7.8   61   61-121    17-83  (112)
 17 1bq0_A DNAJ, HSP40; chaperone,  99.3 1.8E-12   6E-17  102.8   4.7   64   63-128     2-71  (103)
 18 2lgw_A DNAJ homolog subfamily   99.2   1E-11 3.5E-16   98.3   6.8   58   64-121     2-66  (99)
 19 1gh6_A Large T antigen; tumor   99.2 1.7E-12 5.7E-17  105.8   2.2   58   63-120     7-68  (114)
 20 2qsa_A DNAJ homolog DNJ-2; J-d  99.2 1.2E-11   4E-16   98.8   6.0   59   62-120    13-81  (109)
 21 1iur_A KIAA0730 protein; DNAJ   99.2 2.8E-12 9.6E-17  100.0   1.8   59   57-115     9-74  (88)
 22 2pf4_E Small T antigen; PP2A,   99.2 2.4E-12 8.2E-17  112.2   1.5   63   63-127    10-76  (174)
 23 3apq_A DNAJ homolog subfamily   99.2 1.7E-11 5.8E-16  105.6   5.5   62   64-127     2-69  (210)
 24 2l6l_A DNAJ homolog subfamily   99.2 1.9E-11 6.6E-16  103.1   5.6   63   59-121     5-79  (155)
 25 3lz8_A Putative chaperone DNAJ  99.1 3.7E-12 1.3E-16  120.3   0.0   67   58-126    22-93  (329)
 26 2qwo_B Putative tyrosine-prote  99.1 5.8E-11   2E-15   93.6   3.1   50   64-113    33-91  (92)
 27 3ag7_A Putative uncharacterize  99.0   2E-10 6.9E-15   92.3   2.8   52   63-115    40-104 (106)
 28 1n4c_A Auxilin; four helix bun  98.9 4.8E-10 1.6E-14   98.3   3.2   54   64-117   117-179 (182)
 29 3apo_A DNAJ homolog subfamily   98.9 3.3E-10 1.1E-14  115.0   1.5   70   56-127    13-88  (780)
 30 3hho_A CO-chaperone protein HS  98.9   2E-09 6.7E-14   93.1   6.2   59   63-121     3-74  (174)
 31 2guz_B Mitochondrial import in  98.9 9.9E-10 3.4E-14   81.4   3.1   54   61-114     1-59  (65)
 32 3bvo_A CO-chaperone protein HS  98.8 4.6E-09 1.6E-13   93.3   6.2   59   63-121    42-113 (207)
 33 1fpo_A HSC20, chaperone protei  98.8 2.9E-09 9.8E-14   91.9   4.6   57   65-121     2-71  (171)
 34 3uo3_A J-type CO-chaperone JAC  98.7 1.6E-08 5.4E-13   88.2   5.0   60   62-121     9-78  (181)
 35 2y4t_A DNAJ homolog subfamily   97.7 2.6E-05 9.1E-10   70.4   5.1   59   63-121   381-448 (450)
 36 2pzi_A Probable serine/threoni  89.6     0.2 6.9E-06   49.9   3.6   45   64-110   629-675 (681)
 37 2gqb_A Conserved hypothetical   23.6      61  0.0021   26.6   3.3   51   64-122    71-121 (130)
 38 2hgm_A HNRPF protein, heteroge  20.8      57  0.0019   25.8   2.6   20   69-88     47-66  (126)

No 1  
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46  E-value=7.9e-14  Score=105.81  Aligned_cols=70  Identities=30%  Similarity=0.409  Sum_probs=55.0

Q ss_pred             CCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCCc-----HHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           56 GSSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND-----EATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        56 g~~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~gd-----e~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      |+++.....|+|++|||+++||.+|||+|||++++.  ++..++     +++|++|++||++|+++.  +|+.++.+|.
T Consensus         1 g~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~--~R~~YD~~g~   77 (82)
T 2ej7_A            1 GSSGSSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAK--KRDIYDRYGS   77 (82)
T ss_dssp             CCSCCSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTT--HHHHHHHTCC
T ss_pred             CCCCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHcCc
Confidence            344555678999999999999999999999999984  333322     579999999999999998  4555545553


No 2  
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.44  E-value=3.5e-14  Score=106.04  Aligned_cols=61  Identities=15%  Similarity=0.111  Sum_probs=53.8

Q ss_pred             CCCCCCCCCcccccCCCC-CCCHHHHHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhhcHHHH
Q 023242           57 SSNSDSELNPYEVLGVNP-IEGFDMVKAVYAKKRK--EAERNNDEATAARLEKAYDKLMMEQLS  117 (285)
Q Consensus        57 ~~~~~~~~dpYevLGV~~-~AS~eEIk~AYRrl~l--~~~~~gde~~f~~Ie~AYd~L~~~~lr  117 (285)
                      -...|+..++|++|||++ ++|.+|||+|||++++  |+|.++++++|++|++|||+|++..+|
T Consensus         7 ~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A            7 FDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence            345688899999999999 7999999999999999  466788999999999999999997643


No 3  
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42  E-value=2.4e-13  Score=102.41  Aligned_cols=66  Identities=30%  Similarity=0.403  Sum_probs=53.4

Q ss_pred             CCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC----cHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           60 SDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        60 ~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g----de~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      .+...|+|++|||+++|+.+|||+|||++++.  ++..+    .+++|++|++||++|+|+.  +|+.++.+|.
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~--~R~~YD~~g~   74 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV--KRKQYDAYGS   74 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHH--HHHHHHHSCC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHH--HHHHHHhccC
Confidence            35678999999999999999999999999984  33322    2789999999999999998  4555555554


No 4  
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.42  E-value=1.7e-13  Score=102.15  Aligned_cols=64  Identities=28%  Similarity=0.368  Sum_probs=51.9

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC-CcHHHHHHHHHHHHHhhcHHHHhhhhccCCC
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN-NDEATAARLEKAYDKLMMEQLSKRKKGVTFG  126 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~-gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~G  126 (285)
                      +...|+|++|||+++||.+|||+|||++++.  ++.. +++++|++|++||++|+++.  +|+.++.+|
T Consensus         5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~--~R~~YD~~g   71 (73)
T 2och_A            5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEK--KRQIYDQGG   71 (73)
T ss_dssp             -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHH--HHHHHHHTC
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHH--HHHHHHhcC
Confidence            3467999999999999999999999999984  3333 34799999999999999998  455554444


No 5  
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41  E-value=2.4e-13  Score=107.24  Aligned_cols=66  Identities=24%  Similarity=0.296  Sum_probs=55.1

Q ss_pred             CCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC----cHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           56 GSSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN----DEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        56 g~~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g----de~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ++...+...|+|++|||+++|+.+|||+|||++++.  ++..+    .+++|++|++||++|+|+..|+.++
T Consensus         9 ~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD   80 (99)
T 2yua_A            9 QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYD   80 (99)
T ss_dssp             CCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred             CCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            444568889999999999999999999999999984  33332    2789999999999999999666555


No 6  
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41  E-value=2.2e-13  Score=102.57  Aligned_cols=65  Identities=26%  Similarity=0.323  Sum_probs=53.0

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC---CcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~---gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      ++..|+|++|||+++|+.+|||+|||++++.  ++..   +++++|++|++||++|+|+..  |+.++.+|.
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~~~   73 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEK--RKQYDQFGS   73 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHH--HHHHHHTCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHH--HHHHHHcCc
Confidence            5678999999999999999999999999984  3332   347899999999999999984  555544444


No 7  
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.39  E-value=2.1e-13  Score=106.26  Aligned_cols=64  Identities=23%  Similarity=0.340  Sum_probs=53.1

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcC-CCcHHHHHHHHHHHHHhhcHHHHhhhhccCCC
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AER-NNDEATAARLEKAYDKLMMEQLSKRKKGVTFG  126 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~-~gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~G  126 (285)
                      +...|+|++|||+++||.+|||+|||++++.  ++. .+++++|++|++||++|+++..  |+.++.+|
T Consensus         5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~~   71 (92)
T 2o37_A            5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQK--REIYDQYG   71 (92)
T ss_dssp             CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHH--HHHHHHHC
T ss_pred             ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHH--HHHHHHHC
Confidence            4678999999999999999999999999984  333 3678999999999999999984  44444443


No 8  
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.39  E-value=2.6e-13  Score=108.94  Aligned_cols=69  Identities=26%  Similarity=0.276  Sum_probs=55.5

Q ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCCc----HHHHHHHHHHHHHhhcHHHHhhhhccCCCCcc
Q 023242           59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND----EATAARLEKAYDKLMMEQLSKRKKGVTFGSFK  129 (285)
Q Consensus        59 ~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~gd----e~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk~~  129 (285)
                      ..+...|+|++|||+++|+.+|||+|||++++.  ++..++    +++|++|++||++|+|+.  +|+.++.+|...
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~--~R~~YD~~g~~~   86 (109)
T 2ctw_A           12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT--KRNIYDKYGSLG   86 (109)
T ss_dssp             TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHH--HHHHHHHTCHHH
T ss_pred             cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHH--HHHHHHHhcccc
Confidence            346678999999999999999999999999984  443332    689999999999999998  455555566543


No 9  
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38  E-value=3.8e-13  Score=104.33  Aligned_cols=69  Identities=29%  Similarity=0.302  Sum_probs=53.8

Q ss_pred             CCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCCc-----HHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND-----EATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        57 ~~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~gd-----e~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      ++......|+|++|||+++|+.+|||+|||++++.  ++..++     +++|++|++||++|+++..|  +.++.+|.
T Consensus         2 ~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R--~~Yd~~~~   77 (92)
T 2dmx_A            2 SSGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR--SLYDRAGC   77 (92)
T ss_dssp             CCCCCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHH--HHHHHHCS
T ss_pred             CCCCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHhCc
Confidence            34445668999999999999999999999999984  333322     67999999999999999854  44444443


No 10 
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38  E-value=4.7e-13  Score=103.30  Aligned_cols=61  Identities=23%  Similarity=0.315  Sum_probs=50.7

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCCc---HHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND---EATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~gd---e~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ++..|+|++|||+++|+.+|||+|||++++.  ++..++   +++|++|++||++|+++..|+...
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd   69 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYD   69 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            4578999999999999999999999999984  333333   789999999999999998544443


No 11 
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.37  E-value=5.8e-13  Score=100.02  Aligned_cols=63  Identities=21%  Similarity=0.308  Sum_probs=51.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC---CcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~---gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      ..|+|++|||+++||.+|||+|||++++.  ++..   ++++.|++|++||++|+++..  |+.++.+|.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~--R~~Yd~~~~   69 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK--REIFDRYGE   69 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHH--HHHHHHTCG
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHH--HHHHHHHcc
Confidence            36899999999999999999999999984  3332   347999999999999999984  444444553


No 12 
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.37  E-value=7.7e-13  Score=102.08  Aligned_cols=65  Identities=31%  Similarity=0.492  Sum_probs=52.7

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC---CcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~---gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      ....|+|++|||+++|+.+|||+|||++++.  ++..   +++++|++|++||++|+|+..  |+.++.+|.
T Consensus        14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~--R~~YD~~g~   83 (88)
T 2cug_A           14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEK--RTNYDHYGS   83 (88)
T ss_dssp             SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHH--HHHHHHHTT
T ss_pred             cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHH--HHHHHHcCC
Confidence            4568999999999999999999999999984  3332   357999999999999999984  444444443


No 13 
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36  E-value=2.6e-13  Score=105.54  Aligned_cols=55  Identities=22%  Similarity=0.273  Sum_probs=48.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC---CcHHHHHHHHHHHHHhhcHHHH
Q 023242           63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN---NDEATAARLEKAYDKLMMEQLS  117 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~---gde~~f~~Ie~AYd~L~~~~lr  117 (285)
                      ..|+|++|||+++|+.+|||+|||++++.  +|..   +++++|++|++||++|+|+..|
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R   85 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKS   85 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccc
Confidence            58999999999999999999999999993  4433   5689999999999999998733


No 14 
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.36  E-value=3.5e-13  Score=104.50  Aligned_cols=63  Identities=17%  Similarity=0.250  Sum_probs=51.9

Q ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC----------CcHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN----------NDEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        59 ~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~----------gde~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ..+...|+|++|||+++|+.+|||+|||++++.  ++..          +++++|++|++||++|+|+..|+...
T Consensus        11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD   85 (94)
T 1wjz_A           11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYD   85 (94)
T ss_dssp             SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHH
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            346788999999999999999999999999983  3332          13589999999999999998555444


No 15 
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.35  E-value=6.8e-13  Score=101.14  Aligned_cols=58  Identities=14%  Similarity=0.228  Sum_probs=51.8

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhhcHHHHhhh
Q 023242           63 ELNPYEVLGVNPI--EGFDMVKAVYAKKRK--EAERNNDEATAARLEKAYDKLMMEQLSKRK  120 (285)
Q Consensus        63 ~~dpYevLGV~~~--AS~eEIk~AYRrl~l--~~~~~gde~~f~~Ie~AYd~L~~~~lr~R~  120 (285)
                      ..++|++|||+++  +|.+|||+|||++++  +++.++++++|++|++||++|++...|.|.
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~~   71 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRM   71 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence            3679999999999  999999999999999  467788899999999999999998766653


No 16 
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31  E-value=3.9e-12  Score=102.40  Aligned_cols=61  Identities=20%  Similarity=0.317  Sum_probs=50.8

Q ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC----cHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           61 DSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN----DEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        61 ~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g----de~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      +...|+|++|||+++|+.+|||+|||++++.  ++..+    .+++|++|++||++|+|+..|+.++
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD   83 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYD   83 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            4568999999999999999999999999994  33333    2799999999999999998544433


No 17 
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.29  E-value=1.8e-12  Score=102.78  Aligned_cols=64  Identities=27%  Similarity=0.404  Sum_probs=52.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC----cHHHHHHHHHHHHHhhcHHHHhhhhccCCCCc
Q 023242           63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN----DEATAARLEKAYDKLMMEQLSKRKKGVTFGSF  128 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g----de~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk~  128 (285)
                      ..|+|++|||+++||.+|||+|||++++.  ++..+    .+++|++|++||++|+++.  +|+.++.+|..
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~--~R~~YD~~~~~   71 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ--KRAAYDQYGHA   71 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSH--HHHHTTTSTTT
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHhhh
Confidence            47999999999999999999999999984  33322    3789999999999999998  55566666654


No 18 
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.24  E-value=1e-11  Score=98.31  Aligned_cols=58  Identities=22%  Similarity=0.308  Sum_probs=48.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC-----cHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           64 LNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN-----DEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        64 ~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g-----de~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      .|+|++|||+++||.+|||+|||++++.  +|..+     .+++|++|++||++|+|+..|+..+
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD   66 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYD   66 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            5899999999999999999999999994  33332     2579999999999999998544433


No 19 
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.24  E-value=1.7e-12  Score=105.79  Aligned_cols=58  Identities=19%  Similarity=0.304  Sum_probs=50.8

Q ss_pred             CCCcccccCCCCCCCH--HHHHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhhcHHHHhhh
Q 023242           63 ELNPYEVLGVNPIEGF--DMVKAVYAKKRK--EAERNNDEATAARLEKAYDKLMMEQLSKRK  120 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~--eEIk~AYRrl~l--~~~~~gde~~f~~Ie~AYd~L~~~~lr~R~  120 (285)
                      ..|+|++|||+++|+.  +|||+|||++++  |++.++++++|++|++||++|+++..|+++
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~   68 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQ   68 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCS
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHh
Confidence            3589999999999999  999999999999  456677799999999999999999854443


No 20 
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.21  E-value=1.2e-11  Score=98.81  Aligned_cols=59  Identities=22%  Similarity=0.280  Sum_probs=49.4

Q ss_pred             CCCCcccccCCCCCC-CHHHHHHHHHHHhhh--hcCCCc-------HHHHHHHHHHHHHhhcHHHHhhh
Q 023242           62 SELNPYEVLGVNPIE-GFDMVKAVYAKKRKE--AERNND-------EATAARLEKAYDKLMMEQLSKRK  120 (285)
Q Consensus        62 ~~~dpYevLGV~~~A-S~eEIk~AYRrl~l~--~~~~gd-------e~~f~~Ie~AYd~L~~~~lr~R~  120 (285)
                      ...|+|++|||+++| |.+|||+|||++++.  ++..++       +++|++|++||++|+++..|+..
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~Y   81 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNY   81 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence            368999999999999 999999999999984  443332       68999999999999999854443


No 21 
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.20  E-value=2.8e-12  Score=99.99  Aligned_cols=59  Identities=8%  Similarity=0.005  Sum_probs=49.6

Q ss_pred             CCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCCc-----HHHHHHHHHHHHHhhcHH
Q 023242           57 SSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNND-----EATAARLEKAYDKLMMEQ  115 (285)
Q Consensus        57 ~~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~gd-----e~~f~~Ie~AYd~L~~~~  115 (285)
                      +...++..++|++|||+++||.+|||+|||++++.  +|..++     +++|++|++||++|++..
T Consensus         9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~   74 (88)
T 1iur_A            9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA   74 (88)
T ss_dssp             CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            33456778999999999999999999999999994  443332     689999999999999975


No 22 
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.20  E-value=2.4e-12  Score=112.16  Aligned_cols=63  Identities=22%  Similarity=0.392  Sum_probs=52.6

Q ss_pred             CCCcccccCCCCCCC--HHHHHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           63 ELNPYEVLGVNPIEG--FDMVKAVYAKKRK--EAERNNDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        63 ~~dpYevLGV~~~AS--~eEIk~AYRrl~l--~~~~~gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      ..|+|++|||+++|+  .+|||+|||++++  |+|.++++++|++|++||++|+|+.  +|+.++.||.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~--kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV--KYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHH--HHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHH--HHHHHhccCC
Confidence            368999999999999  6999999999999  4566677899999999999999998  5666667775


No 23 
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.18  E-value=1.7e-11  Score=105.56  Aligned_cols=62  Identities=26%  Similarity=0.417  Sum_probs=50.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC----CcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           64 LNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        64 ~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~----gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      .|+|++|||+++||.+|||+|||++++.  +|..    ..+++|++|++||++|+|+..|  +.++.+|.
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r--~~yd~~~~   69 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR--KKYDKYGE   69 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHH--HHHHHHTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHH--HHHHHhcc
Confidence            5899999999999999999999999993  4333    2478999999999999999854  44445554


No 24 
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.17  E-value=1.9e-11  Score=103.09  Aligned_cols=63  Identities=17%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             CCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCCC-c---------HHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           59 NSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERNN-D---------EATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        59 ~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~g-d---------e~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ..+...|+|++|||+++|+.+|||+|||++++.  +|..+ +         +++|++|++||++|+|+..|+.+.
T Consensus         5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd   79 (155)
T 2l6l_A            5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYD   79 (155)
T ss_dssp             CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHH
T ss_pred             ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence            346678999999999999999999999999994  33322 1         489999999999999998655443


No 25 
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.15  E-value=3.7e-12  Score=120.28  Aligned_cols=67  Identities=25%  Similarity=0.393  Sum_probs=0.0

Q ss_pred             CCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC---CcHHHHHHHHHHHHHhhcHHHHhhhhccCCC
Q 023242           58 SNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN---NDEATAARLEKAYDKLMMEQLSKRKKGVTFG  126 (285)
Q Consensus        58 ~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~---gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~G  126 (285)
                      +..|+..|||++|||+++||.+|||+|||++++.  +|..   .++++|++|++|||+|+|+.  +|+.++.|+
T Consensus        22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~--~R~~YD~~~   93 (329)
T 3lz8_A           22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQ--RRAEYDQLW   93 (329)
T ss_dssp             --------------------------------------------------------------------------
T ss_pred             cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhh--hhcccchhh
Confidence            3457889999999999999999999999999984  3322   23789999999999999998  566665553


No 26 
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.06  E-value=5.8e-11  Score=93.62  Aligned_cols=50  Identities=16%  Similarity=0.203  Sum_probs=42.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHhhh--hcC-CC------cHHHHHHHHHHHHHhhc
Q 023242           64 LNPYEVLGVNPIEGFDMVKAVYAKKRKE--AER-NN------DEATAARLEKAYDKLMM  113 (285)
Q Consensus        64 ~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~-~g------de~~f~~Ie~AYd~L~~  113 (285)
                      .+.|++|||+++||.+|||+|||++++.  +|. ++      .+++|++|++|||+|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999993  322 12      26799999999999975


No 27 
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=98.96  E-value=2e-10  Score=92.30  Aligned_cols=52  Identities=13%  Similarity=0.050  Sum_probs=43.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHhhh--hcC----CCc-------HHHHHHHHHHHHHhhcHH
Q 023242           63 ELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AER----NND-------EATAARLEKAYDKLMMEQ  115 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~----~gd-------e~~f~~Ie~AYd~L~~~~  115 (285)
                      +.|+|++||++. ||.+|||+|||++++.  +|.    +.+       +++|++|++||++|+|+.
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            379999999996 9999999999999993  322    222       689999999999999864


No 28 
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.90  E-value=4.8e-10  Score=98.32  Aligned_cols=54  Identities=15%  Similarity=0.215  Sum_probs=45.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC--C-----cHHHHHHHHHHHHHhhcHHHH
Q 023242           64 LNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN--N-----DEATAARLEKAYDKLMMEQLS  117 (285)
Q Consensus        64 ~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~--g-----de~~f~~Ie~AYd~L~~~~lr  117 (285)
                      .|+|++|||+++|+.+|||+|||++++.  +|..  .     .+++|++|++||++|+|+..|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR  179 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK  179 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhh
Confidence            6999999999999999999999999993  3321  1     357999999999999998743


No 29 
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.88  E-value=3.3e-10  Score=115.01  Aligned_cols=70  Identities=24%  Similarity=0.402  Sum_probs=37.1

Q ss_pred             CCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHhhh--hcCC----CcHHHHHHHHHHHHHhhcHHHHhhhhccCCCC
Q 023242           56 GSSNSDSELNPYEVLGVNPIEGFDMVKAVYAKKRKE--AERN----NDEATAARLEKAYDKLMMEQLSKRKKGVTFGS  127 (285)
Q Consensus        56 g~~~~~~~~dpYevLGV~~~AS~eEIk~AYRrl~l~--~~~~----gde~~f~~Ie~AYd~L~~~~lr~R~~g~~~Gk  127 (285)
                      |+.....+.|||++|||+++||.+|||+|||++++.  +|..    +.+++|++|++||++|+|+.  +|+.++.||.
T Consensus        13 ~~~~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~--~r~~yd~~~~   88 (780)
T 3apo_A           13 GHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDED--LRKKYDKYGE   88 (780)
T ss_dssp             ----------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHH--HHHHHTTC--
T ss_pred             CCCCCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChH--HHHHHHhhcc
Confidence            333445678999999999999999999999999983  3332    23679999999999999998  4555555554


No 30 
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=98.88  E-value=2e-09  Score=93.10  Aligned_cols=59  Identities=15%  Similarity=0.178  Sum_probs=48.4

Q ss_pred             CCCcccccCCCCCCC--HHHHHHHHHHHhh--hhcCCC---------cHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           63 ELNPYEVLGVNPIEG--FDMVKAVYAKKRK--EAERNN---------DEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        63 ~~dpYevLGV~~~AS--~eEIk~AYRrl~l--~~~~~g---------de~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ..|||++|||+++++  .+|||+|||++++  |++..+         ..++|++|++||++|+|+..|..+.
T Consensus         3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd   74 (174)
T 3hho_A            3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYL   74 (174)
T ss_dssp             -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence            479999999999998  9999999999999  343321         1378999999999999998665554


No 31 
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.86  E-value=9.9e-10  Score=81.43  Aligned_cols=54  Identities=11%  Similarity=0.152  Sum_probs=48.3

Q ss_pred             CCCCCcccccCCCCC---CCHHHHHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhhcH
Q 023242           61 DSELNPYEVLGVNPI---EGFDMVKAVYAKKRK--EAERNNDEATAARLEKAYDKLMME  114 (285)
Q Consensus        61 ~~~~dpYevLGV~~~---AS~eEIk~AYRrl~l--~~~~~gde~~f~~Ie~AYd~L~~~  114 (285)
                      |+..++|+||||+++   ++.+||+++||+++.  +++.+|+.....+|++|+|.|..+
T Consensus         1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            556789999999999   999999999999998  466789999999999999998764


No 32 
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.80  E-value=4.6e-09  Score=93.33  Aligned_cols=59  Identities=10%  Similarity=0.134  Sum_probs=47.9

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHhh--hhcCCC---c------HHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           63 ELNPYEVLGVNPI--EGFDMVKAVYAKKRK--EAERNN---D------EATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        63 ~~dpYevLGV~~~--AS~eEIk~AYRrl~l--~~~~~g---d------e~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ..|+|++|||+++  +|.+|||+|||++++  |+|..+   +      +++|++|++||++|+|+..|..+.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd  113 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYL  113 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            5799999999987  799999999999999  343321   1      357899999999999999666654


No 33 
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.80  E-value=2.9e-09  Score=91.92  Aligned_cols=57  Identities=7%  Similarity=0.190  Sum_probs=47.0

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHhhh--hcCC-C--c------HHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           65 NPYEVLGVNPIE--GFDMVKAVYAKKRKE--AERN-N--D------EATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        65 dpYevLGV~~~A--S~eEIk~AYRrl~l~--~~~~-g--d------e~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      |||++|||++++  |.+|||+|||++++.  ++.. +  +      .++|++|++||++|+|+..|..+.
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd   71 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYL   71 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence            799999999999  999999999999983  3321 1  1      258999999999999998665554


No 34 
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.66  E-value=1.6e-08  Score=88.19  Aligned_cols=60  Identities=12%  Similarity=0.130  Sum_probs=49.1

Q ss_pred             CCCCccccc------CCCC-CCCHHHHHHHHHHHhhh--hcCCC-cHHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           62 SELNPYEVL------GVNP-IEGFDMVKAVYAKKRKE--AERNN-DEATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        62 ~~~dpYevL------GV~~-~AS~eEIk~AYRrl~l~--~~~~g-de~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ...|+|++|      |+.+ +||.+|||+|||++++.  +|..+ ++++|++|++||++|+|+..|..+.
T Consensus         9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd   78 (181)
T 3uo3_A            9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYM   78 (181)
T ss_dssp             CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHH
T ss_pred             CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHH
Confidence            457999999      4655 99999999999999983  43333 5789999999999999999666554


No 35 
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.72  E-value=2.6e-05  Score=70.41  Aligned_cols=59  Identities=17%  Similarity=0.204  Sum_probs=45.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHhh--hhcCCCc-------HHHHHHHHHHHHHhhcHHHHhhhh
Q 023242           63 ELNPYEVLGVNPIEGFDMVKAVYAKKRK--EAERNND-------EATAARLEKAYDKLMMEQLSKRKK  121 (285)
Q Consensus        63 ~~dpYevLGV~~~AS~eEIk~AYRrl~l--~~~~~gd-------e~~f~~Ie~AYd~L~~~~lr~R~~  121 (285)
                      ..+.|++||+.+.++.+||+++|+++.+  ++++..+       +++|++|.+||++|.|++.|.|.+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd  448 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFD  448 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhcc
Confidence            3589999999999999999999998776  3333332       569999999999999999555543


No 36 
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.63  E-value=0.2  Score=49.88  Aligned_cols=45  Identities=11%  Similarity=-0.031  Sum_probs=36.8

Q ss_pred             CCcccccCCCCCCCH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHH
Q 023242           64 LNPYEVLGVNPIEGF--DMVKAVYAKKRKEAERNNDEATAARLEKAYDK  110 (285)
Q Consensus        64 ~dpYevLGV~~~AS~--eEIk~AYRrl~l~~~~~gde~~f~~Ie~AYd~  110 (285)
                      .|+|++||++-++..  .+|++|||++++.  .++++++++-|..|+.+
T Consensus       629 ~~~~~~lG~~~~~~~lr~~~~~ayr~la~~--~~~~~~r~~lvd~a~~v  675 (681)
T 2pzi_A          629 ASTNHILGFPFTSHGLRLGVEASLRSLARV--APTQRHRYTLVDMANKV  675 (681)
T ss_dssp             CSSSEETTEESSHHHHHHHHHHHHHHHHHH--CSSHHHHHHHHHHHHHH
T ss_pred             CCCcccCCCCCChHHHHHHHHHHHHHHHHh--CCChHHHHHHHHHhccc
Confidence            349999999777766  7799999999875  57778899889888754


No 37 
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=23.60  E-value=61  Score=26.62  Aligned_cols=51  Identities=18%  Similarity=0.218  Sum_probs=31.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhhcHHHHhhhhc
Q 023242           64 LNPYEVLGVNPIEGFDMVKAVYAKKRKEAERNNDEATAARLEKAYDKLMMEQLSKRKKG  122 (285)
Q Consensus        64 ~dpYevLGV~~~AS~eEIk~AYRrl~l~~~~~gde~~f~~Ie~AYd~L~~~~lr~R~~g  122 (285)
                      -|-.+.|||+.+-      .+.++|+.+-++.+|..--+..|-+.-.-.|++|.  .+|
T Consensus        71 VDLmKlLglDsSl------~~RkeLA~eL~~~~~~~dSA~mNiwLHk~vm~kLa--~NG  121 (130)
T 2gqb_A           71 VDLMKALDIDSSL------SARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV--ANG  121 (130)
T ss_dssp             HHHHHHTCCCCSH------HHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG--GGS
T ss_pred             HHHHHHhCCCccH------HHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH--HhC
Confidence            4678899997653      23335666656776655555666666556666654  565


No 38 
>2hgm_A HNRPF protein, heterogeneous nuclear ribonucleoprotein F; RNA recognition motif, G-tract, G-quadruplex, alternative splicing, RNA binding protein; NMR {Homo sapiens} PDB: 2kg0_A
Probab=20.78  E-value=57  Score=25.76  Aligned_cols=20  Identities=5%  Similarity=-0.057  Sum_probs=17.1

Q ss_pred             ccCCCCCCCHHHHHHHHHHH
Q 023242           69 VLGVNPIEGFDMVKAVYAKK   88 (285)
Q Consensus        69 vLGV~~~AS~eEIk~AYRrl   88 (285)
                      |=||+.+++++||++.+...
T Consensus        47 VgnLp~~~te~dL~~~F~~~   66 (126)
T 2hgm_A           47 LRGLPFGCTKEEIVQFFSGL   66 (126)
T ss_dssp             EECCCTTCCHHHHHHHTTTS
T ss_pred             EeCCCCCCCHHHHHHHHhcC
Confidence            56999999999999988653


Done!