BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023246
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R448|DCAF8_PONAB DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2
SV=1
Length = 597
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 137/222 (61%), Gaps = 26/222 (11%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ G++
Sbjct: 332 VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRK---IDENENNGVLKKFCPHHLVNGESKA 388
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + +ELL SYNDE +YLF + G + KR Y GHRN+
Sbjct: 389 NITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----YKGHRNNA 435
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT
Sbjct: 436 TVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLAT 495
Query: 181 CGIEKTVKLWAPMP---TDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+WAP T+ L D ++K NK+ R++ S
Sbjct: 496 SGLDHDVKIWAPTAEASTELTGLKD----VIKKNKRERDEDS 533
>sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1
SV=1
Length = 591
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 135/219 (61%), Gaps = 20/219 (9%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N + FAVGG D+Y R+YD RK ++ + FCP HL+ ++
Sbjct: 326 VGLYTIYVNPANTHQFAVGGRDQYVRIYDQRK---IDENENNGVLKKFCPHHLVNSESKA 382
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + +ELL SYNDE +YLF + G + KR Y GHRN+
Sbjct: 383 NITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----YKGHRNNA 429
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT
Sbjct: 430 TVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLAT 489
Query: 181 CGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+WAP L ++++K NK+ R++ S
Sbjct: 490 SGLDHDVKIWAPTAEASTELT-GLKEVIKKNKRERDEDS 527
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 136/222 (61%), Gaps = 26/222 (11%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ ++
Sbjct: 332 VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRK---IDENENNGVLKKFCPHHLVNSESKA 388
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + +ELL SYNDE +YLF + G + KR Y GHRN+
Sbjct: 389 NITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYV--------KR-----YKGHRNNA 435
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT
Sbjct: 436 TVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLAT 495
Query: 181 CGIEKTVKLWAPMP---TDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+WAP T+ L D ++K NK+ R++ S
Sbjct: 496 SGLDHDVKIWAPTAEASTELTGLKD----VIKKNKRERDEDS 533
>sp|Q6NRH1|DCAF8_XENLA DDB1- and CUL4-associated factor 8 OS=Xenopus laevis GN=dcaf8 PE=2
SV=1
Length = 601
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 134/219 (61%), Gaps = 20/219 (9%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N FAVGG D++ R+YD RK + ++ + FCP HL+ +
Sbjct: 335 VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRK---INENVNNGVLKKFCPHHLVTSEAKA 391
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + SELL SYNDE +YLF + G E + Y GHRN+
Sbjct: 392 NITCLVYSHDGSELLASYNDEDIYLFNSSHSDGA-------------EYIKRYKGHRNNA 438
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++V+ M GD+ VVN LEPHPH+P+ AT
Sbjct: 439 TVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLAT 498
Query: 181 CGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+W P + P D ++++K NK+ R++ S
Sbjct: 499 SGLDYDVKIWLPTAKE-PTELDGLKEVIKKNKRERDEDS 536
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 136/222 (61%), Gaps = 26/222 (11%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N + FAVGG D++ R+YD RK ++ + FCP HL+ ++
Sbjct: 326 VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRK---IDENENNGVLKKFCPHHLVNSESKA 382
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + +ELL SYNDE +YLF + G + KR Y GHRN+
Sbjct: 383 NITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYI--------KR-----YKGHRNNA 429
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++++ M GD+ VVN LEPHPH+P+ AT
Sbjct: 430 TVKGVNFYGPKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLPVLAT 489
Query: 181 CGIEKTVKLWAPMP---TDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+WAP T+ L D ++K NK+ R++ S
Sbjct: 490 SGLDHDVKIWAPTAEASTELTGLKD----VIKKNKRERDEDS 527
>sp|Q28I90|DCAF8_XENTR DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis GN=dcaf8
PE=2 SV=1
Length = 604
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 134/219 (61%), Gaps = 20/219 (9%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNI 62
+ L I ++P N FAVGG D++ R+YD RK + ++ + FCP HL+ +
Sbjct: 338 VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRK---INENVNNGVLKKFCPHHLVTSEAKA 394
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT L YS + SELL SYNDE +YLF + G E + Y GHRN+
Sbjct: 395 NITCLVYSHDGSELLASYNDEDIYLFNSSHSDGA-------------EYIKRYKGHRNNA 441
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F+W+K ++V+ M GD+ VVN LEPHPH+P+ AT
Sbjct: 442 TVKGVNFYGPRSEFVVSGSDCGHIFLWEKSSCQIVQFMDGDKGGVVNCLEPHPHLPVLAT 501
Query: 181 CGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+W P + P + ++++K NK+ R++ S
Sbjct: 502 SGLDYDVKIWLPTAKE-PTELNGLKEVIKKNKRERDEDS 539
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 30/263 (11%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-I 62
+ L I ++P N FAVGG D++ R+YD R+ ++ + F P HL+ +
Sbjct: 335 VGLYTISMNPANIYQFAVGGHDQFVRIYDQRR---IDKKENNGVLKKFTPHHLVYCDFPT 391
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT + YS + +ELL SYNDE +YLF ++ G + KR Y GHRN+
Sbjct: 392 NITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQYV--------KR-----YKGHRNND 438
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-HVVNQLEPHPHIPMFAT 180
T+K VNF+GP E+V+SGSDCGH+F W+K ++++ M GDR +VN LEPHP++P+ AT
Sbjct: 439 TIKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLAT 498
Query: 181 CGIEKTVKLWAP---MPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237
G+++ V++W P T+ L D ++K NKQ R D + T +LR R
Sbjct: 499 SGLDQHVRIWTPTAKTATELTGLKD----VIKKNKQER-DEDNLNYTDSFDNRMLRFFVR 553
Query: 238 QTLAYRER---RYNAADFESDEE 257
L + R + A+F +EE
Sbjct: 554 HLLQRAHQPGWRDHGAEFPDEEE 576
>sp|P0C7V8|DC8L2_HUMAN DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens
GN=DCAF8L2 PE=2 SV=1
Length = 602
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 20/219 (9%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-I 62
+ L I ++P N FAVGG D++ R+YD RK ++ + F P HL+ +
Sbjct: 338 VGLYTITVNPANTYQFAVGGQDQFVRIYDQRKI---DKKENNGVLKKFTPHHLVNCDFPT 394
Query: 63 HITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ 121
+IT + YS + +ELL SYND+ +YLF + G KR + GHRN+
Sbjct: 395 NITCVVYSHDGTELLASYNDDDIYLFNSSHSDGAQ--------YSKR-----FKGHRNNT 441
Query: 122 TVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-VVNQLEPHPHIPMFAT 180
TVKGVNF+GP E+V+SGSDCGH+F W+K ++++ + G R +N LEPHP++P+ A
Sbjct: 442 TVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLKGSREGTINCLEPHPYLPVLAC 501
Query: 181 CGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHS 219
G++ VK+W P L +K++K NK R++ S
Sbjct: 502 SGLDHDVKIWTPTAKAATELT-GLKKVIKKNKWERDEDS 539
>sp|Q58WW2|DCAF6_HUMAN DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1
SV=1
Length = 860
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 113 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 172 HPHIPMFATCGIEKTVKLWAPM 193
HP P+ A+ GI+ +K+W+P+
Sbjct: 770 HPFDPILASSGIDYDIKIWSPL 791
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 8 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 62
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SC 254
Query: 63 HITGLAYS-NTSELLISYNDELVYLFE 88
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|Q5R9B8|DCAF6_PONAB DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2
SV=2
Length = 860
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 113 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 712 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 769
Query: 172 HPHIPMFATCGIEKTVKLWAPM 193
HP P+ A+ GI+ +K+W+P+
Sbjct: 770 HPFDPILASSGIDYDIKIWSPL 791
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 8 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 62
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNK-SC 254
Query: 63 HITGLAYS-NTSELLISYNDELVYLFE 88
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1
SV=1
Length = 876
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 3/82 (3%)
Query: 113 VYSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
VY GHRNS+T +K NF+G N +VMSGSDCGH+FIW + + + L+ D HVVN L+P
Sbjct: 728 VYKGHRNSRTMIKEANFWGAN--FVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQP 785
Query: 172 HPHIPMFATCGIEKTVKLWAPM 193
HP P+ A+ GI+ +K+W+P+
Sbjct: 786 HPFDPILASSGIDYDIKIWSPL 807
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 8 AIVIDPRNPNYFAVGGSDEYARVYD-----IRKCHWYSPISSDTPVDTFCPRHLIGKNNI 62
++ I P P Y AVG SD R+YD R Y+ + V F P HL K +
Sbjct: 196 SVAICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLSNK-SC 254
Query: 63 HITGLAYS-NTSELLISYNDELVYLFE 88
+T L YS + E+L+SY+ + +YLF+
Sbjct: 255 RVTSLCYSEDGQEILVSYSSDYIYLFD 281
>sp|O94527|IQW1_SCHPO WD repeat protein iqw1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iqw1 PE=1 SV=1
Length = 809
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 94 GPSPLSLSPEDLQKREEPQV--------YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 145
GP+ LSL + +K EP V Y GH N +++K VNF+G NDEYVMSGSD G
Sbjct: 637 GPTLLSLRMKK-RKAVEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRF 695
Query: 146 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL----- 200
FIW K ++ ++ GD VN +E HP P A GI+ TVK++ T PP
Sbjct: 696 FIWDKLNASILAIIHGDSEAVNVIEGHPRCPTLAVSGIDSTVKIFNTENT--PPSGCSRN 753
Query: 201 -PDNAEKIMKANKQGREDHSRIT-LTPDVIMHV 231
N+ KI+ N+ R+ SR + +T ++ H+
Sbjct: 754 HTSNSYKIIATNEMNRQQGSRDSYITSRMLSHL 786
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 14/119 (11%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH------W---YSPISSDTPVDTFCPR 54
I L I + P NP YFA+GG+ YA +YD R W SP V F P
Sbjct: 196 INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPEKDCRCVRKFSPD 255
Query: 55 HLIGKNNI---HITGLAYS--NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKR 108
I +IT +S N +ELL+S+N + VYLF + +P ED K+
Sbjct: 256 GSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLFHVHEDKSYTPTFNKIEDSNKK 314
>sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1
PE=1 SV=2
Length = 677
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 114 YSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 172
Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+ LVR++ GD +VN L+PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 173 PHIPMFATCGIEKTVKLWAPMP 194
P AT GI+ V+LW P P
Sbjct: 590 PSYCFLATSGIDPVVRLWNPRP 611
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPR------ 54
+ + ++P++ N AVG S + R+YDIR H + +P V TFC R
Sbjct: 185 VEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPD 244
Query: 55 ---------HLIGK-----NNIHITGLAYS----NTSELLISYNDELVYLFE 88
HL K N + + Y N +ELL++ E VYLF+
Sbjct: 245 GAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
>sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1
PE=1 SV=1
Length = 677
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 114 YSGHRNSQT-VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPH 172
Y GH N+ T +K NFFG N +Y++SGSD G FIW+K+ LVR++ GD +VN L+PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 173 PHIPMFATCGIEKTVKLWAPMP 194
P AT GI+ V+LW P P
Sbjct: 590 PSYCFLATSGIDPVVRLWNPRP 611
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP---VDTFCPRHL---I 57
+ + ++P++ N AVG S + R+YDIR H + +P V TFC R
Sbjct: 185 VEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPD 244
Query: 58 GKNNIHITG--------------------LAYS-NTSELLISYNDELVYLFE 88
G ++ G + +S N +ELL++ E VYLF+
Sbjct: 245 GAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFD 296
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL 67
+ + P N N FA D ++DIR+ P F H + N + L
Sbjct: 147 GLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAF---HSVMFNPVEPRLL 203
Query: 68 AYSNTSE------------LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY- 114
A +N+ E L+ Y L ++ + L L++R P +Y
Sbjct: 204 ATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLA--LRRRLPPVLYD 261
Query: 115 ------------SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-------GKL 155
G+ NS T+K F G D+Y++SGSD +L++WK G++
Sbjct: 262 IHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRV 321
Query: 156 VR----LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 192
V ++ G R +VNQ+ +PH M + G+EK +K+W+P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL 67
+ + P N N FA D ++DIR+ P F H + N + L
Sbjct: 147 GLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLANYPSAF---HSVMFNPVEPRLL 203
Query: 68 AYSNTSE------------LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY- 114
A +N+ E L+ Y L ++ + L L++R P +Y
Sbjct: 204 ATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLLA--LRRRLPPVLYD 261
Query: 115 ------------SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-------GKL 155
G+ NS T+K F G D+Y++SGSD +L++W+ G++
Sbjct: 262 IHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRV 321
Query: 156 VR----LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 192
V ++ G R +VNQ+ +PH M + G+EK +K+W+P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q9UT85|YIPC_SCHPO Uncharacterized WD repeat-containing protein C343.04c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC343.04c PE=4 SV=1
Length = 507
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163
DL++ + Y GH+ + G F G +D +V+SGS+ + IW ++ GKL+ + G
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHV 470
Query: 164 HVVNQLEPHPHIP-MFATCGIEKTVKLWA 191
VN + +P P FA+ G + TV++W+
Sbjct: 471 KCVNYVAYNPVDPYQFASAGDDNTVRIWS 499
>sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=3
Length = 641
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 534 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHT 593
Query: 164 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 194
VN + +P IP M A+ + TV++W P P
Sbjct: 594 RTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 625
>sp|Q9H7D7|WDR26_HUMAN WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3
Length = 661
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 554 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHT 613
Query: 164 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 194
VN + +P IP M A+ + TV++W P P
Sbjct: 614 RTVNCVSWNPQIPSMMASASDDGTVRIWGPAP 645
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNF--FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161
D++K+ Y GH +GVN F P+ +V+SG + + +W GKL+
Sbjct: 129 DIRKKGCIHTYKGH-----TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLW 190
+ L+ HPH + AT ++TVK W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F ++ V +G+ G + +W + K+VR + G R ++ HP FA+ ++ +K
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
Query: 189 LW 190
+W
Sbjct: 127 IW 128
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 233 TLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 292
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 293 LQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 86 LFEKNMGLGPSPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVM 137
+ K G + L+LS Q +E P+ GH ++ V V F PN E++
Sbjct: 1 MATKESGDAKAQLALSSSANQSKEVPENPNYALKCTLVGH--TEAVSSVKF-SPNGEWLA 57
Query: 138 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 190
S S + IW GK R + G ++ + + +KT+KLW
Sbjct: 58 SSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLW 110
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D + + Y+GH+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 233 TLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 292
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 293 LQGHTDVVISAACHPTENLIASAALENDKTIKLW 326
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 94 GPSPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 145
+ L+LS Q +E P+ GH ++ V V F PN E++ S S +
Sbjct: 9 AKAQLALSSSANQSKEVPENPNYALKCTLVGH--TEAVSSVKF-SPNGEWLASSSADRLI 65
Query: 146 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 190
IW GK + + G ++ + + +KT+KLW
Sbjct: 66 IIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLW 110
>sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1
Length = 313
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 19 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 77
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 78 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 137
S N + L + G+ + G+ NS+ V F P+ +++M
Sbjct: 212 STNGSFIRLIDAFKGV----------------VMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 138 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 195
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 196 D 196
D
Sbjct: 313 D 313
>sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1
Length = 313
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 19 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 77
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 78 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 137
S N + L + G+ + G+ NS+ V F P+ +++M
Sbjct: 212 STNGSFIRLIDAFKGV----------------VMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 138 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 195
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 196 D 196
D
Sbjct: 313 D 313
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 49/206 (23%)
Query: 17 NYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTF----------------------- 51
N G DE R++D+R KC P SD PV
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDT 227
Query: 52 ----CPRHLIGKNNIHITGLAYS-NTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQ 106
C + LI +N ++ + +S N +L + D + L+ D
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW----------------DYS 271
Query: 107 KREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV 166
K + + Y+GH+N + NF ++++SGS+ ++IW + ++V+ + G V
Sbjct: 272 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Query: 167 NQLEPHPHIPMFATCGIE--KTVKLW 190
HP + A+ +E KT+KLW
Sbjct: 332 LCTACHPTENIIASAALENDKTIKLW 357
>sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2
SV=2
Length = 614
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163
DLQ R + Y G F G N++++ SGS+ +++W K+ + + G
Sbjct: 507 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYVWHKRSELPIAELTGHT 566
Query: 164 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 194
VN + +P IP + A+ + TV++W P P
Sbjct: 567 RTVNCVSWNPQIPSLMASASDDGTVRIWGPAP 598
>sp|Q5ZMV7|WDR82_CHICK WD repeat-containing protein 82 OS=Gallus gallus GN=WDR82 PE=2 SV=1
Length = 313
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 19 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LI 77
FA G + E ++YD+R P TF ++ TGL +SN +L LI
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKMQY---DRTCEWTGLKFSNDGKLILI 211
Query: 78 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM 137
S N + L D K + G+ NS+ V F P+ +++M
Sbjct: 212 STNGGFIRLI----------------DAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIM 255
Query: 138 SGSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPT 195
GS+ G + +W + G V ++ G +H + L+ +P FA+ + W P
Sbjct: 256 IGSEDGKIHVWNGESGMKVAVLDG-KHTGPITCLQFNPKFMTFASAC--SNMAFWLPTID 312
Query: 196 D 196
D
Sbjct: 313 D 313
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
SL D +K + + Y+GH+N + N P ++++SGS+ G + +W + ++V++
Sbjct: 405 SLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQI 464
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G V + HP + + A+ G+E +++W
Sbjct: 465 LEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIW 498
>sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1
Length = 313
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 30/180 (16%)
Query: 19 FAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 78
FA G + E ++YD+R P TF ++ + TGL +SN +L+
Sbjct: 162 FAAGVNSEMVKLYDLRSF-------DKGPFATFKLQY---ERTCEWTGLKFSNDGKLI-- 209
Query: 79 YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS 138
L N G +L D K + G+ NS+ V F P+ +++M
Sbjct: 210 -------LVSTNGG------TLRVLDAFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMI 256
Query: 139 GSDCGHLFIWKKKGGKLVRLMVGDRHV--VNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
GS+ G + +W + G V L+ G +H V L+ +P FA+ + W P D
Sbjct: 257 GSEDGKIHVWNAESGMKVALLDG-KHTGPVTCLQFNPKFMTFASAC--SNMAFWLPTIDD 313
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F ++E +++GS G L IW + K++R ++G + V+ L+ HP+ A+ ++ +K
Sbjct: 71 FNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIK 130
Query: 189 LW 190
LW
Sbjct: 131 LW 132
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 114 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 173
Y GH +Q V+ + F P+ +++ S SD + +W GK++ + + VN +E HP
Sbjct: 143 YKGH--TQAVRCLRF-SPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHP 199
Query: 174 HIPMFATCGIEKTVKLW 190
+ + A+ ++TV+ W
Sbjct: 200 NEYLLASGSADRTVRFW 216
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 112 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
+ Y+GH+N + +F ++V+SGS+ ++IW + ++V+ + G VV
Sbjct: 244 KTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC 303
Query: 172 HPHIPMFATCGIE--KTVKLWA 191
HP + A+ +E KT+K+W+
Sbjct: 304 HPTKNIIASAALENDKTIKVWS 325
>sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1
Length = 576
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 104 DLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163
DLQ R + Y G F G N++++ SGS+ ++IW K+ + + G
Sbjct: 466 DLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHT 525
Query: 164 HVVNQLEPHPHIP-MFATCGIEKTVKLWAPMP 194
VN + +P IP + A+ + TV++W P P
Sbjct: 526 RTVNCVSWNPCIPSLMASASDDGTVRIWGPAP 557
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 112 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
+ Y+GH+N + +F ++V+SGS+ ++IW + ++V+ + G VV
Sbjct: 244 KTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAAC 303
Query: 172 HPHIPMFATCGIE--KTVKLWA 191
HP + A+ +E KT+K+W+
Sbjct: 304 HPTENIIASAALENDKTIKIWS 325
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 96 SPLSLSPEDLQKREEPQ--------VYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFI 147
SPLS +P Q+ EEPQ +GH S + V F PN E++ S + + I
Sbjct: 13 SPLS-AP---QRVEEPQKPNYALRLTLAGH--SAAISSVKF-SPNGEWLASSAADALIII 65
Query: 148 WKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 190
W GK + + G ++ + + +KT+KLW
Sbjct: 66 WGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLW 108
>sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
Length = 720
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 19 FAVGGSDEYARVYDIRK---CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 75
+ G D +V+D+RK + P+ S + +G +++ + S + L
Sbjct: 228 ISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTSTRKLGYSSLVLD----STGANL 283
Query: 76 LISYNDELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE 134
+ D+ +Y+F NM L P++ V+SGH+NS T + P+D+
Sbjct: 284 FANCTDDSIYMF--NMTSLKTFPVA-------------VFSGHQNS-TFYIKSSISPDDQ 327
Query: 135 YVMSGSDCGHLFIWKKKGGKL-VRLMVGDRHVVNQLEPHPH-IPMFATCGIEKTVKLW 190
+++SGS + +IWK L R++VG V + P ATC + TV++W
Sbjct: 328 FLVSGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIW 385
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
+L D K + + Y+ H+N + NF ++++SGS+ ++IW + ++V+
Sbjct: 237 TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQK 296
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLW 190
+ G VV HP + A+ +E KT+KLW
Sbjct: 297 LQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E + + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC ++T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E + + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC ++T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E + + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC ++T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F ++E V++GS G L +W + K++R ++G + ++ L+ HP A+ ++ +K
Sbjct: 71 FNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIK 130
Query: 189 LW 190
LW
Sbjct: 131 LW 132
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 114 YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP 173
Y GH +Q V+ + F P+ +++ S SD + +W GK++ VN ++ HP
Sbjct: 143 YKGH--TQAVRCLAF-SPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP 199
Query: 174 HIPMFATCGIEKTVKLW 190
+ + A+ ++TVKLW
Sbjct: 200 NEYLLASGSADRTVKLW 216
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 99 SLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158
SL DL+ + + GH+ S + ++F P EY+ SGS ++ +W + V
Sbjct: 86 SLRLWDLEAAKILRTLMGHKAS--ISSLDFH-PMGEYLASGSVDSNIKLWDVRRKGCVFR 142
Query: 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW----APMPTDF 197
G V L P A+ + TVKLW M T+F
Sbjct: 143 YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEF 185
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E + + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC ++T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E + + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC ++T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
SGH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 SGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
KN+ S S+ D + +GH S V V F P+ + + +GS+ + +W
Sbjct: 1168 KNLASASSDHSIKLWDTTSGQLLMTLTGH--SAGVITVRF-SPDGQTIAAGSEDKTVKLW 1224
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 190
++ GKL++ + G + VN L P A+ +KT+KLW
Sbjct: 1225 HRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F P + + S + + IW+ + GK ++ ++G + VN++ P A+ + TVK
Sbjct: 1412 FTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVK 1471
Query: 189 LW 190
LW
Sbjct: 1472 LW 1473
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F P+ + + SG + +W+ G L++ + G VN + P A+ + ++K
Sbjct: 1121 FSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIK 1180
Query: 189 LW 190
LW
Sbjct: 1181 LW 1182
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F P+ + + S S + +W G L++ + +V + +P M A+ +KTVK
Sbjct: 1496 FSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVK 1555
Query: 189 LW 190
LW
Sbjct: 1556 LW 1557
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 112 QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEP 171
+ +GH QTV V +F P+ + + S S + +W G+L+ + G V +
Sbjct: 1149 KTITGHE--QTVNNV-YFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRF 1205
Query: 172 HPHIPMFATCGIEKTVKLW 190
P A +KTVKLW
Sbjct: 1206 SPDGQTIAAGSEDKTVKLW 1224
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 129 FGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVK 188
F P+ + S S + +W+ G L+ G +VV P A+ +KTVK
Sbjct: 1538 FNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVK 1597
Query: 189 LWAPMPTDFPPLPDNAEKIMKA 210
+W LP + +M A
Sbjct: 1598 IWQIDGHLLTTLPQHQAGVMSA 1619
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 116 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 175
GH N V VNF P+ + + S S + +W GK + + G V + P
Sbjct: 1444 GHDNE--VNKVNF-SPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDG 1500
Query: 176 PMFATCGIEKTVKLW 190
+ A+ +KT++LW
Sbjct: 1501 KIIASASADKTIRLW 1515
>sp|B4KT48|LIS1_DROMO Lissencephaly-1 homolog OS=Drosophila mojavensis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E V + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-VKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC + T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
+GH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 NGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + ++++VK+W
Sbjct: 393 HPYVISGSVDQSVKVW 408
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + LS+ D Q+ E V + H + V V F P +YV+S S + +W
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-VKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMW 220
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
+ G V+ G R V + H +FATC + T+++W D
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
+GH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 NGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 116 GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 175
GH N V+ V F P ++++S SD L IW K + + +V H V L+ H
Sbjct: 335 GHDN--WVRAV-MFHPGGKFIVSCSDDKTLRIWDYKNKRCAKTLVAHEHFVTTLDFHKSA 391
Query: 176 PMFATCGIEKTVKLW 190
P AT ++ T+K+W
Sbjct: 392 PFVATGSVDLTLKVW 406
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148
K + + +++ D Q E + GH V ++F P+ ++++S S + +W
Sbjct: 161 KFLASSSADMTIKLWDFQGFECIRTLHGH--DHNVSSISFL-PSGDHLVSASRDKTIKMW 217
Query: 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWA 191
+ G V+ G V ++ P+ + A+C ++T+++W
Sbjct: 218 EIATGYCVKTFQGHGEWVRRVRPNADGSLIASCSNDQTIRVWV 260
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 96 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 155
+ LS+ D Q+ E V + H + V V F P +YV+S S + +W+ G
Sbjct: 170 ADLSIKLWDFQQSYEC-VKTMHGHDHNVSSVAFV-PAGDYVLSASRDRTIKMWEVATGYC 227
Query: 156 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196
V+ G R V + H +FATC + T+++W D
Sbjct: 228 VKTYTGHREWVRMVRVHIEGSIFATCSNDHTIRVWLTNSKD 268
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPH 174
+GH N V+G+ F P +Y++S SD + +W + + ++ + +H ++ H
Sbjct: 336 NGHDN--WVRGLAFH-PGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKA 392
Query: 175 IPMFATCGIEKTVKLW 190
P + +++TVK+W
Sbjct: 393 HPYVISGSVDQTVKVW 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,190,519
Number of Sequences: 539616
Number of extensions: 5209893
Number of successful extensions: 13527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 12491
Number of HSP's gapped (non-prelim): 1120
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)