Query 023246
Match_columns 285
No_of_seqs 391 out of 1577
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 03:35:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 6E-37 2E-41 244.5 26.6 233 3-270 13-261 (304)
2 1vyh_C Platelet-activating fac 100.0 1.2E-36 4.2E-41 252.4 27.2 234 2-270 107-371 (410)
3 4gqb_B Methylosome protein 50; 100.0 1.8E-36 6.1E-41 245.4 24.1 204 3-239 127-334 (344)
4 4gqb_B Methylosome protein 50; 100.0 2.4E-36 8.3E-41 244.6 23.7 234 4-269 83-332 (344)
5 3ow8_A WD repeat-containing pr 100.0 7.9E-36 2.7E-40 239.7 25.1 205 3-243 80-286 (321)
6 4ery_A WD repeat-containing pr 100.0 5.8E-35 2E-39 233.7 28.5 233 3-270 23-270 (312)
7 3ow8_A WD repeat-containing pr 100.0 2.6E-35 8.8E-40 236.7 25.8 235 2-269 31-280 (321)
8 1vyh_C Platelet-activating fac 100.0 2.9E-35 9.8E-40 244.2 25.8 228 2-265 149-408 (410)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-35 1.6E-39 237.6 25.3 201 4-235 17-224 (345)
10 1got_B GT-beta; complex (GTP-b 100.0 1.1E-34 3.7E-39 235.0 26.9 234 3-269 55-302 (340)
11 2pm7_B Protein transport prote 100.0 5E-34 1.7E-38 226.8 27.5 235 2-267 8-284 (297)
12 3frx_A Guanine nucleotide-bind 100.0 1.8E-34 6E-39 231.7 24.5 211 2-243 16-234 (319)
13 2pbi_B Guanine nucleotide-bind 100.0 6.8E-34 2.3E-38 231.5 27.7 239 2-270 63-317 (354)
14 1got_B GT-beta; complex (GTP-b 100.0 5E-34 1.7E-38 231.1 26.0 209 2-242 96-307 (340)
15 3iz6_a 40S ribosomal protein R 100.0 1.1E-34 3.7E-39 238.4 22.3 249 3-269 66-376 (380)
16 2ynn_A Coatomer subunit beta'; 100.0 2.1E-34 7.1E-39 229.8 22.0 206 3-243 55-266 (304)
17 4g56_B MGC81050 protein; prote 100.0 7.6E-34 2.6E-38 231.4 25.0 240 3-269 42-302 (357)
18 4g56_B MGC81050 protein; prote 100.0 2.5E-34 8.6E-39 234.2 22.1 204 3-239 139-346 (357)
19 2hes_X YDR267CP; beta-propelle 100.0 5.5E-34 1.9E-38 229.9 23.8 240 2-267 57-327 (330)
20 3frx_A Guanine nucleotide-bind 100.0 1.1E-33 3.6E-38 227.2 24.1 227 3-268 65-317 (319)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-33 1E-37 227.0 26.5 238 3-271 61-338 (345)
22 2hes_X YDR267CP; beta-propelle 100.0 2.2E-33 7.4E-38 226.4 25.5 209 2-237 13-231 (330)
23 4e54_B DNA damage-binding prot 100.0 2.7E-33 9.3E-38 234.1 26.5 207 4-243 120-334 (435)
24 1erj_A Transcriptional repress 100.0 5.2E-33 1.8E-37 229.4 25.7 202 5-243 125-348 (393)
25 2pbi_B Guanine nucleotide-bind 100.0 7.5E-33 2.6E-37 225.3 26.1 232 2-263 105-352 (354)
26 3bg1_A Protein SEC13 homolog; 100.0 4.2E-34 1.4E-38 229.2 18.2 235 2-267 12-292 (316)
27 4ery_A WD repeat-containing pr 100.0 1.5E-32 5.2E-37 219.7 26.6 206 3-243 65-275 (312)
28 2xzm_R RACK1; ribosome, transl 100.0 1.7E-32 5.7E-37 222.4 26.7 239 2-270 20-287 (343)
29 2xzm_R RACK1; ribosome, transl 100.0 1.3E-32 4.3E-37 223.1 25.0 227 3-268 76-340 (343)
30 1erj_A Transcriptional repress 100.0 2.5E-32 8.4E-37 225.4 26.9 244 3-270 64-343 (393)
31 4aow_A Guanine nucleotide-bind 100.0 1.1E-32 3.6E-37 222.8 23.5 253 2-269 37-338 (340)
32 1nr0_A Actin interacting prote 100.0 2.4E-32 8.2E-37 237.6 27.0 201 3-239 59-273 (611)
33 3ei3_B DNA damage-binding prot 100.0 6.6E-32 2.3E-36 222.0 27.1 208 3-243 73-289 (383)
34 1nr0_A Actin interacting prote 100.0 4E-32 1.4E-36 236.2 26.8 197 3-235 147-396 (611)
35 3dwl_C Actin-related protein 2 100.0 2.9E-33 9.8E-38 229.6 15.9 232 3-267 11-280 (377)
36 3iz6_a 40S ribosomal protein R 100.0 6.5E-32 2.2E-36 221.9 23.0 208 3-239 157-378 (380)
37 3dm0_A Maltose-binding peripla 100.0 7.7E-32 2.6E-36 237.8 24.9 237 2-269 381-633 (694)
38 2pm7_B Protein transport prote 100.0 3.9E-31 1.3E-35 210.1 26.3 204 3-237 53-286 (297)
39 3jrp_A Fusion protein of prote 100.0 3.1E-31 1E-35 217.1 24.9 233 2-267 10-286 (379)
40 1gxr_A ESG1, transducin-like e 100.0 5.5E-31 1.9E-35 212.3 25.7 238 3-270 51-298 (337)
41 3vl1_A 26S proteasome regulato 100.0 1.2E-31 4.2E-36 222.9 21.4 205 2-240 138-369 (420)
42 3k26_A Polycomb protein EED; W 100.0 2.1E-31 7.1E-36 217.1 21.9 237 2-270 17-320 (366)
43 3dm0_A Maltose-binding peripla 100.0 2.7E-31 9.2E-36 234.3 24.0 225 3-266 430-691 (694)
44 3vl1_A 26S proteasome regulato 100.0 1.3E-30 4.3E-35 216.7 26.1 227 8-269 102-366 (420)
45 1gxr_A ESG1, transducin-like e 100.0 2.6E-30 8.9E-35 208.3 27.0 206 3-243 97-303 (337)
46 2ymu_A WD-40 repeat protein; u 100.0 3.6E-31 1.2E-35 228.6 22.8 192 3-233 385-577 (577)
47 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-30 6.3E-35 214.8 25.7 210 2-239 80-302 (402)
48 4h5i_A Guanine nucleotide-exch 100.0 6.7E-31 2.3E-35 214.6 22.7 196 5-237 135-344 (365)
49 3gre_A Serine/threonine-protei 100.0 7.3E-31 2.5E-35 219.4 23.1 239 3-271 63-362 (437)
50 2ymu_A WD-40 repeat protein; u 100.0 1E-30 3.6E-35 225.8 24.7 194 3-235 344-538 (577)
51 2xyi_A Probable histone-bindin 100.0 5.2E-31 1.8E-35 219.9 21.7 250 3-269 128-411 (430)
52 3dw8_B Serine/threonine-protei 100.0 8E-31 2.7E-35 219.6 22.8 258 3-271 28-376 (447)
53 2pm9_A Protein WEB1, protein t 100.0 3.2E-30 1.1E-34 213.9 25.9 248 3-272 67-341 (416)
54 3bg1_A Protein SEC13 homolog; 100.0 3.5E-31 1.2E-35 212.2 19.2 205 3-237 57-294 (316)
55 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-30 1.1E-34 208.4 24.9 214 2-237 10-250 (351)
56 2pm9_A Protein WEB1, protein t 100.0 5.5E-31 1.9E-35 218.5 20.4 212 3-239 113-340 (416)
57 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-30 1.2E-34 210.6 24.5 232 2-268 7-274 (372)
58 3i2n_A WD repeat-containing pr 100.0 6.2E-31 2.1E-35 213.7 19.3 237 3-271 18-294 (357)
59 4aez_A CDC20, WD repeat-contai 100.0 1.3E-29 4.3E-34 209.7 27.2 233 3-272 134-384 (401)
60 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-30 9.2E-35 231.6 24.7 232 3-269 13-260 (814)
61 3ei3_B DNA damage-binding prot 100.0 9.1E-30 3.1E-34 209.2 24.7 205 2-243 117-346 (383)
62 3k26_A Polycomb protein EED; W 100.0 6.8E-31 2.3E-35 214.1 17.8 227 3-266 69-364 (366)
63 3i2n_A WD repeat-containing pr 100.0 6.4E-30 2.2E-34 207.7 23.1 237 3-269 65-354 (357)
64 4e54_B DNA damage-binding prot 100.0 1.2E-30 4.2E-35 218.1 19.3 233 2-269 163-431 (435)
65 3zwl_B Eukaryotic translation 100.0 1.1E-29 3.6E-34 207.2 24.1 207 2-245 31-258 (369)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-29 3.7E-34 210.2 23.6 241 6-270 37-301 (402)
67 2j04_B YDR362CP, TAU91; beta p 100.0 2.9E-30 1E-34 219.2 20.3 162 3-197 266-431 (524)
68 2j04_B YDR362CP, TAU91; beta p 100.0 2.1E-30 7.2E-35 220.1 19.4 210 3-237 207-429 (524)
69 3v7d_B Cell division control p 100.0 3.5E-29 1.2E-33 210.8 26.2 245 2-272 161-425 (464)
70 4a11_B DNA excision repair pro 100.0 9.7E-29 3.3E-33 204.2 28.5 213 2-238 42-278 (408)
71 3dwl_C Actin-related protein 2 100.0 4.3E-30 1.5E-34 210.6 19.7 201 3-235 55-280 (377)
72 3jro_A Fusion protein of prote 100.0 7.2E-30 2.5E-34 226.8 22.6 237 2-269 8-286 (753)
73 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-29 4.4E-34 207.2 22.3 222 3-240 96-365 (372)
74 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-29 5E-34 211.4 22.0 238 4-270 16-290 (588)
75 4aez_A CDC20, WD repeat-contai 100.0 5.8E-29 2E-33 205.8 25.6 227 5-269 95-337 (401)
76 1r5m_A SIR4-interacting protei 100.0 4.4E-29 1.5E-33 207.2 24.9 241 3-270 45-363 (425)
77 1r5m_A SIR4-interacting protei 100.0 1.2E-29 3.9E-34 210.8 21.0 214 3-238 149-363 (425)
78 1sq9_A Antiviral protein SKI8; 100.0 3E-29 1E-33 206.9 23.1 212 2-244 61-330 (397)
79 3dw8_B Serine/threonine-protei 100.0 1.5E-29 5E-34 211.9 21.5 218 4-240 94-377 (447)
80 1sq9_A Antiviral protein SKI8; 100.0 1.8E-29 6.1E-34 208.2 21.3 210 3-237 121-396 (397)
81 3jrp_A Fusion protein of prote 100.0 1.5E-28 5.2E-33 201.1 25.6 209 2-241 54-292 (379)
82 3f3f_A Nucleoporin SEH1; struc 100.0 7E-29 2.4E-33 200.5 22.7 216 2-243 56-344 (351)
83 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.6E-29 2.3E-33 208.4 22.5 220 4-244 5-279 (450)
84 3sfz_A APAF-1, apoptotic pepti 100.0 9.4E-29 3.2E-33 230.8 25.8 229 3-267 615-912 (1249)
85 3zwl_B Eukaryotic translation 100.0 3.2E-28 1.1E-32 198.3 25.3 244 2-269 73-347 (369)
86 2xyi_A Probable histone-bindin 100.0 1.7E-28 5.8E-33 204.8 23.9 211 3-237 181-411 (430)
87 3mmy_A MRNA export factor; mRN 100.0 9E-29 3.1E-33 201.6 21.7 209 2-243 38-311 (368)
88 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-28 5.9E-33 198.8 21.9 236 4-267 77-332 (343)
89 1yfq_A Cell cycle arrest prote 100.0 5.1E-29 1.7E-33 201.4 18.7 231 2-270 10-284 (342)
90 1pgu_A Actin interacting prote 100.0 1.4E-28 4.8E-33 213.8 22.2 235 3-268 63-328 (615)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-28 5.9E-33 205.9 22.0 197 5-234 104-337 (450)
92 4gga_A P55CDC, cell division c 100.0 5.8E-28 2E-32 201.0 24.4 233 3-271 147-398 (420)
93 3odt_A Protein DOA1; ubiquitin 100.0 7.3E-28 2.5E-32 192.1 23.3 228 2-270 17-257 (313)
94 3gre_A Serine/threonine-protei 100.0 1E-28 3.5E-33 206.4 18.9 216 3-243 111-366 (437)
95 4ggc_A P55CDC, cell division c 100.0 5.4E-28 1.8E-32 193.4 22.3 245 6-269 28-316 (318)
96 4gq1_A NUP37; propeller, trans 100.0 1.5E-28 5.3E-33 202.7 19.5 215 16-259 101-381 (393)
97 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-27 4.7E-32 199.6 25.4 225 3-273 173-419 (435)
98 2w18_A PALB2, fancn, partner a 100.0 2.7E-28 9.1E-33 192.2 19.5 211 2-234 110-355 (356)
99 4gga_A P55CDC, cell division c 100.0 2.2E-27 7.7E-32 197.4 26.1 227 6-269 108-354 (420)
100 3v7d_B Cell division control p 100.0 1.5E-27 5.2E-32 200.8 24.4 223 6-269 125-382 (464)
101 2oaj_A Protein SNI1; WD40 repe 100.0 1.8E-28 6.2E-33 221.0 19.6 198 3-240 17-246 (902)
102 4a11_B DNA excision repair pro 100.0 1.5E-27 5.1E-32 197.1 23.4 160 2-196 98-278 (408)
103 1pgu_A Actin interacting prote 100.0 5.5E-28 1.9E-32 210.0 21.4 237 2-269 17-284 (615)
104 3odt_A Protein DOA1; ubiquitin 100.0 4E-27 1.4E-31 187.8 24.4 232 3-275 59-303 (313)
105 3jro_A Fusion protein of prote 100.0 1E-27 3.5E-32 213.0 23.0 206 2-238 52-287 (753)
106 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-27 6.2E-32 222.2 25.5 199 2-236 656-913 (1249)
107 3mkq_A Coatomer beta'-subunit; 100.0 7.4E-28 2.5E-32 215.8 21.6 207 2-243 54-266 (814)
108 1p22_A F-BOX/WD-repeat protein 100.0 2.9E-27 9.8E-32 197.6 23.5 221 4-270 134-367 (435)
109 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7.6E-27 2.6E-31 195.6 25.2 219 6-270 122-350 (445)
110 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-27 4.3E-32 193.7 19.5 222 16-269 48-293 (343)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.9E-27 3.1E-31 195.2 25.2 218 5-268 201-442 (445)
112 1yfq_A Cell cycle arrest prote 100.0 2.2E-27 7.6E-32 191.8 20.5 224 3-270 56-315 (342)
113 2j04_A TAU60, YPL007P, hypothe 100.0 8.6E-28 2.9E-32 200.8 18.0 194 3-235 85-296 (588)
114 4aow_A Guanine nucleotide-bind 100.0 1.4E-26 4.9E-31 186.8 24.7 199 3-238 128-339 (340)
115 3vu4_A KMHSV2; beta-propeller 100.0 4.2E-27 1.4E-31 191.5 20.8 195 3-237 19-272 (355)
116 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-27 4.6E-32 215.4 18.6 228 5-242 437-738 (902)
117 4h5i_A Guanine nucleotide-exch 100.0 4.3E-27 1.5E-31 192.1 19.3 162 3-194 176-343 (365)
118 4ggc_A P55CDC, cell division c 100.0 5.4E-26 1.8E-30 181.7 23.9 217 3-237 67-316 (318)
119 3vu4_A KMHSV2; beta-propeller 100.0 1.7E-25 5.9E-30 181.9 26.3 214 5-239 60-339 (355)
120 2w18_A PALB2, fancn, partner a 99.9 1E-26 3.5E-31 183.2 16.9 154 4-192 179-355 (356)
121 3mmy_A MRNA export factor; mRN 99.9 4.1E-26 1.4E-30 185.8 17.4 198 3-235 86-345 (368)
122 4gq1_A NUP37; propeller, trans 99.9 4E-26 1.4E-30 188.2 17.1 215 3-237 136-390 (393)
123 1l0q_A Surface layer protein; 99.9 1.3E-24 4.3E-29 179.0 24.1 228 4-269 32-276 (391)
124 3bws_A Protein LP49; two-domai 99.9 7.3E-25 2.5E-29 182.7 21.4 208 5-243 124-341 (433)
125 1l0q_A Surface layer protein; 99.9 1.2E-23 4E-28 173.2 24.6 201 4-243 74-282 (391)
126 2oit_A Nucleoporin 214KDA; NH2 99.9 3.3E-24 1.1E-28 178.6 18.4 224 2-237 35-279 (434)
127 3bws_A Protein LP49; two-domai 99.9 2E-23 6.9E-28 174.0 22.7 204 3-244 169-398 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.5E-22 2.6E-26 163.7 21.8 195 3-237 178-388 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-21 4.4E-26 163.0 23.1 167 4-195 93-279 (434)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-20 3.9E-25 156.6 24.2 219 17-273 144-392 (415)
131 2ojh_A Uncharacterized protein 99.9 7E-20 2.4E-24 144.3 24.3 230 3-269 41-294 (297)
132 3vgz_A Uncharacterized protein 99.9 6.1E-20 2.1E-24 148.7 24.2 239 5-271 90-338 (353)
133 2ecf_A Dipeptidyl peptidase IV 99.9 2.9E-20 1E-24 165.1 21.8 218 3-243 36-328 (741)
134 1ri6_A Putative isomerase YBHE 99.8 1.5E-18 5.1E-23 139.8 24.4 199 4-235 38-261 (343)
135 1nir_A Nitrite reductase; hemo 99.8 3.8E-19 1.3E-23 152.1 21.9 197 10-244 144-363 (543)
136 1xfd_A DIP, dipeptidyl aminope 99.8 9.3E-20 3.2E-24 161.5 18.0 197 5-240 18-293 (723)
137 3u4y_A Uncharacterized protein 99.8 1.9E-18 6.3E-23 138.9 23.7 193 10-239 4-210 (331)
138 3u4y_A Uncharacterized protein 99.8 1.8E-18 6.3E-23 138.9 22.0 198 5-239 42-255 (331)
139 3vgz_A Uncharacterized protein 99.8 2.3E-18 8E-23 139.4 22.3 206 4-244 41-270 (353)
140 1nir_A Nitrite reductase; hemo 99.8 1.2E-18 3.9E-23 149.1 20.3 210 5-244 281-522 (543)
141 1pby_B Quinohemoprotein amine 99.8 2.6E-18 8.8E-23 138.1 20.2 205 5-245 35-319 (337)
142 2z3z_A Dipeptidyl aminopeptida 99.8 6.2E-19 2.1E-23 155.8 17.3 195 4-235 82-341 (706)
143 2ecf_A Dipeptidyl peptidase IV 99.8 1.3E-18 4.3E-23 154.7 17.6 194 5-235 110-366 (741)
144 2ojh_A Uncharacterized protein 99.8 2.8E-18 9.5E-23 135.1 17.7 178 21-235 17-203 (297)
145 1xfd_A DIP, dipeptidyl aminope 99.8 2.1E-18 7.1E-23 152.8 16.7 162 5-197 62-292 (723)
146 1jmx_B Amine dehydrogenase; ox 99.8 1.1E-17 3.9E-22 135.0 18.8 202 5-244 44-333 (349)
147 3o4h_A Acylamino-acid-releasin 99.8 8.8E-18 3E-22 145.3 17.5 196 3-240 21-231 (582)
148 1jmx_B Amine dehydrogenase; ox 99.8 2.1E-17 7.3E-22 133.4 17.9 153 8-196 4-177 (349)
149 1ri6_A Putative isomerase YBHE 99.8 5E-17 1.7E-21 130.9 19.7 186 17-236 6-209 (343)
150 2z3z_A Dipeptidyl aminopeptida 99.8 1.7E-16 5.9E-21 140.2 23.9 200 6-238 183-437 (706)
151 3hfq_A Uncharacterized protein 99.8 1.2E-16 4E-21 129.3 20.9 203 5-236 41-271 (347)
152 1pby_B Quinohemoprotein amine 99.8 1.5E-16 5.2E-21 127.7 20.4 146 17-196 2-165 (337)
153 1k32_A Tricorn protease; prote 99.8 2E-17 6.7E-22 152.2 17.0 205 5-238 246-463 (1045)
154 1k32_A Tricorn protease; prote 99.8 2.7E-17 9.3E-22 151.2 17.7 191 5-235 297-501 (1045)
155 1z68_A Fibroblast activation p 99.7 2.8E-17 9.7E-22 145.5 14.3 208 5-238 61-348 (719)
156 1z68_A Fibroblast activation p 99.7 2.6E-17 9E-22 145.7 12.8 190 8-238 20-293 (719)
157 4a5s_A Dipeptidyl peptidase 4 99.7 5.1E-16 1.7E-20 137.9 20.9 199 5-238 18-296 (740)
158 3o4h_A Acylamino-acid-releasin 99.7 4.6E-16 1.6E-20 134.6 17.9 190 4-234 65-274 (582)
159 3pe7_A Oligogalacturonate lyas 99.7 4.2E-15 1.4E-19 121.9 21.3 226 9-270 41-331 (388)
160 3fvz_A Peptidyl-glycine alpha- 99.7 3.6E-14 1.2E-18 114.0 25.6 232 3-269 23-313 (329)
161 3scy_A Hypothetical bacterial 99.7 3.9E-14 1.3E-18 115.1 26.1 201 5-235 51-290 (361)
162 3hfq_A Uncharacterized protein 99.7 1.1E-14 3.8E-19 117.7 22.4 210 4-236 86-317 (347)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 6.2E-15 2.1E-19 120.1 20.1 199 5-235 41-290 (365)
164 3scy_A Hypothetical bacterial 99.7 5.1E-14 1.7E-18 114.4 22.5 216 6-236 102-337 (361)
165 4a5s_A Dipeptidyl peptidase 4 99.7 6.8E-15 2.3E-19 130.7 18.5 206 7-238 65-355 (740)
166 1q7f_A NHL, brain tumor CG1071 99.6 8.5E-14 2.9E-18 109.4 21.6 196 5-237 78-281 (286)
167 1jof_A Carboxy-CIS,CIS-muconat 99.6 3.1E-14 1.1E-18 116.0 19.1 200 6-237 85-342 (365)
168 3azo_A Aminopeptidase; POP fam 99.6 6.5E-14 2.2E-18 122.9 22.1 155 60-235 128-322 (662)
169 1q7f_A NHL, brain tumor CG1071 99.6 4.5E-13 1.5E-17 105.3 24.1 199 5-235 31-237 (286)
170 3pe7_A Oligogalacturonate lyas 99.6 4.1E-14 1.4E-18 116.0 17.2 197 6-239 83-332 (388)
171 3no2_A Uncharacterized protein 99.6 2.3E-13 8E-18 106.3 19.2 190 17-244 6-203 (276)
172 1rwi_B Serine/threonine-protei 99.6 6.6E-13 2.3E-17 103.3 20.8 197 5-237 25-223 (270)
173 1xip_A Nucleoporin NUP159; bet 99.6 3.2E-13 1.1E-17 109.5 19.4 183 2-222 36-230 (388)
174 3azo_A Aminopeptidase; POP fam 99.6 2.5E-13 8.4E-18 119.2 20.2 200 4-238 130-371 (662)
175 2dg1_A DRP35, lactonase; beta 99.6 3.1E-12 1E-16 102.7 23.9 226 5-267 46-300 (333)
176 3fvz_A Peptidyl-glycine alpha- 99.6 8.4E-13 2.9E-17 106.0 19.9 206 5-237 92-323 (329)
177 1rwi_B Serine/threonine-protei 99.5 2.2E-12 7.6E-17 100.3 21.6 198 5-239 68-267 (270)
178 3e5z_A Putative gluconolactona 99.5 1.9E-12 6.6E-17 102.2 20.4 198 6-243 30-252 (296)
179 3c5m_A Oligogalacturonate lyas 99.5 6.9E-14 2.4E-18 114.8 12.4 197 6-239 38-276 (396)
180 2xdw_A Prolyl endopeptidase; a 99.5 6.1E-13 2.1E-17 117.7 18.7 198 5-238 126-370 (710)
181 2dg1_A DRP35, lactonase; beta 99.5 5.2E-13 1.8E-17 107.2 15.9 197 1-236 3-213 (333)
182 2gop_A Trilobed protease; beta 99.5 1.1E-12 3.9E-17 105.7 18.0 181 5-237 60-292 (347)
183 3c5m_A Oligogalacturonate lyas 99.5 2.3E-13 8E-18 111.6 13.8 192 8-239 85-332 (396)
184 3e5z_A Putative gluconolactona 99.5 5E-12 1.7E-16 99.8 19.2 198 3-237 68-287 (296)
185 2bkl_A Prolyl endopeptidase; m 99.5 3.6E-12 1.2E-16 112.4 20.2 196 5-235 122-348 (695)
186 3dsm_A Uncharacterized protein 99.5 2E-11 6.9E-16 97.9 21.4 205 5-244 85-309 (328)
187 2bkl_A Prolyl endopeptidase; m 99.4 7.5E-12 2.6E-16 110.5 17.6 161 57-238 116-306 (695)
188 3dsm_A Uncharacterized protein 99.4 3.4E-11 1.2E-15 96.5 19.2 220 6-265 46-285 (328)
189 2oiz_A Aromatic amine dehydrog 99.4 6.2E-12 2.1E-16 102.2 14.9 206 8-243 54-343 (361)
190 2z2n_A Virginiamycin B lyase; 99.4 4.7E-10 1.6E-14 88.2 24.6 193 4-234 15-211 (299)
191 3hrp_A Uncharacterized protein 99.4 2.1E-10 7.3E-15 94.6 22.1 196 5-239 132-357 (409)
192 1yr2_A Prolyl oligopeptidase; 99.4 5.4E-11 1.8E-15 105.7 18.7 195 5-235 164-392 (741)
193 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-10 5.3E-15 102.3 21.6 203 5-238 172-416 (710)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2.8E-10 9.4E-15 90.3 20.9 206 5-243 19-263 (314)
195 2z2n_A Virginiamycin B lyase; 99.3 2.4E-09 8.2E-14 84.1 25.3 193 4-234 57-253 (299)
196 3g4e_A Regucalcin; six bladed 99.3 9.4E-10 3.2E-14 86.8 22.8 224 7-269 16-264 (297)
197 3no2_A Uncharacterized protein 99.3 4E-10 1.4E-14 87.9 20.2 155 5-197 38-198 (276)
198 1qks_A Cytochrome CD1 nitrite 99.3 2.1E-09 7.3E-14 92.0 25.8 196 5-236 198-421 (567)
199 2oiz_A Aromatic amine dehydrog 99.3 1.4E-09 4.7E-14 88.4 22.8 176 24-237 29-231 (361)
200 2gop_A Trilobed protease; beta 99.3 4E-11 1.4E-15 96.6 13.8 180 6-235 106-330 (347)
201 2ghs_A AGR_C_1268P; regucalcin 99.3 1.7E-09 5.9E-14 86.5 23.0 222 7-269 52-294 (326)
202 2qc5_A Streptogramin B lactona 99.3 3.7E-09 1.3E-13 83.1 23.9 193 4-234 20-216 (300)
203 1qks_A Cytochrome CD1 nitrite 99.3 9.3E-10 3.2E-14 94.2 21.6 190 17-244 168-381 (567)
204 2hz6_A Endoplasmic reticulum t 99.3 1.6E-12 5.5E-17 105.9 4.2 188 17-243 10-199 (369)
205 1xip_A Nucleoporin NUP159; bet 99.3 1.2E-10 4.2E-15 94.4 14.4 130 6-180 90-230 (388)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.2E-09 1.1E-13 84.1 22.1 199 4-237 71-300 (314)
207 1yr2_A Prolyl oligopeptidase; 99.2 4E-10 1.4E-14 100.2 17.8 157 58-237 159-351 (741)
208 2qc5_A Streptogramin B lactona 99.2 9.7E-09 3.3E-13 80.6 23.9 193 4-234 62-258 (300)
209 3sjl_D Methylamine dehydrogena 99.2 7.3E-09 2.5E-13 83.8 21.6 219 9-266 38-299 (386)
210 3dr2_A Exported gluconolactona 99.2 3E-09 1E-13 84.3 18.9 152 6-195 47-225 (305)
211 3iuj_A Prolyl endopeptidase; h 99.1 1.8E-09 6.2E-14 95.2 15.7 196 5-237 130-360 (693)
212 3g4e_A Regucalcin; six bladed 99.1 2.5E-08 8.5E-13 78.6 20.6 161 4-197 54-232 (297)
213 2qe8_A Uncharacterized protein 99.1 1.1E-08 3.8E-13 82.4 17.9 233 5-267 18-310 (343)
214 2ghs_A AGR_C_1268P; regucalcin 99.0 5.4E-08 1.8E-12 77.8 20.0 155 4-195 90-261 (326)
215 3hrp_A Uncharacterized protein 99.0 4.2E-08 1.4E-12 80.9 19.6 158 9-198 176-358 (409)
216 2mad_H Methylamine dehydrogena 99.0 2.3E-07 7.8E-12 75.5 23.1 155 8-195 70-244 (373)
217 2mad_H Methylamine dehydrogena 99.0 4.5E-07 1.5E-11 73.8 24.6 145 11-196 28-197 (373)
218 3sjl_D Methylamine dehydrogena 99.0 4.8E-08 1.6E-12 79.0 17.7 225 8-266 82-351 (386)
219 2iwa_A Glutamine cyclotransfer 99.0 1.3E-07 4.3E-12 72.6 18.7 194 6-238 23-239 (266)
220 1npe_A Nidogen, entactin; glyc 99.0 6.5E-07 2.2E-11 69.3 22.4 202 5-243 37-245 (267)
221 3c75_H MADH, methylamine dehyd 98.9 1.5E-07 5.2E-12 77.4 19.3 174 26-237 99-296 (426)
222 3iuj_A Prolyl endopeptidase; h 98.9 9.4E-08 3.2E-12 84.3 19.1 198 7-238 178-407 (693)
223 2qe8_A Uncharacterized protein 98.9 4.4E-08 1.5E-12 78.9 13.3 213 4-236 67-311 (343)
224 2hz6_A Endoplasmic reticulum t 98.9 1.8E-09 6.1E-14 87.9 5.1 145 72-243 8-156 (369)
225 3dr2_A Exported gluconolactona 98.9 2E-07 6.9E-12 73.7 16.8 159 4-198 86-271 (305)
226 2ece_A 462AA long hypothetical 98.8 3.1E-07 1.1E-11 75.2 17.5 157 13-192 93-287 (462)
227 3c75_H MADH, methylamine dehyd 98.8 1.1E-07 3.9E-12 78.1 15.0 229 8-268 122-392 (426)
228 3hxj_A Pyrrolo-quinoline quino 98.8 4.2E-07 1.4E-11 72.4 16.8 180 17-240 108-287 (330)
229 1npe_A Nidogen, entactin; glyc 98.7 1.4E-05 4.9E-10 61.6 22.6 158 62-238 36-200 (267)
230 2ece_A 462AA long hypothetical 98.7 2.4E-05 8.3E-10 64.1 24.2 156 8-193 142-351 (462)
231 3q7m_A Lipoprotein YFGL, BAMB; 98.7 4.7E-06 1.6E-10 67.7 20.0 195 17-240 54-262 (376)
232 2iwa_A Glutamine cyclotransfer 98.6 5E-06 1.7E-10 63.8 17.8 161 63-246 22-191 (266)
233 1mda_H Methylamine dehydrogena 98.6 1E-06 3.5E-11 71.2 14.7 101 17-151 33-157 (368)
234 3nok_A Glutaminyl cyclase; bet 98.6 6.5E-06 2.2E-10 62.6 18.0 150 6-197 57-213 (268)
235 3nol_A Glutamine cyclotransfer 98.6 9.4E-06 3.2E-10 61.7 18.3 151 6-197 45-204 (262)
236 1fwx_A Nitrous oxide reductase 98.6 8.2E-06 2.8E-10 69.2 19.7 186 14-236 100-361 (595)
237 1yiq_A Quinohemoprotein alcoho 98.6 3.3E-06 1.1E-10 74.3 17.8 201 25-244 182-513 (689)
238 1kb0_A Quinohemoprotein alcoho 98.6 2.3E-06 7.9E-11 75.1 16.8 209 17-244 175-515 (677)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2E-05 6.8E-10 64.0 21.3 105 133-244 239-345 (376)
240 3hxj_A Pyrrolo-quinoline quino 98.6 3.6E-06 1.2E-10 66.9 16.3 136 72-234 107-242 (330)
241 2xe4_A Oligopeptidase B; hydro 98.6 1.5E-05 5.3E-10 70.9 21.7 193 5-233 175-395 (751)
242 2fp8_A Strictosidine synthase; 98.5 3.7E-05 1.3E-09 61.1 20.8 169 6-195 21-217 (322)
243 3nol_A Glutamine cyclotransfer 98.5 6.6E-06 2.3E-10 62.5 15.4 179 63-266 44-244 (262)
244 3nok_A Glutaminyl cyclase; bet 98.5 6.8E-06 2.3E-10 62.5 14.9 178 63-266 56-254 (268)
245 1kb0_A Quinohemoprotein alcoho 98.5 5.8E-06 2E-10 72.6 16.4 54 143-197 457-510 (677)
246 3mbr_X Glutamine cyclotransfer 98.5 8.4E-05 2.9E-09 55.9 20.2 152 5-197 22-182 (243)
247 2p9w_A MAL S 1 allergenic prot 98.5 0.00018 6.1E-09 56.6 22.1 160 7-194 16-215 (334)
248 1ijq_A LDL receptor, low-densi 98.4 0.00026 8.8E-09 56.1 23.1 204 5-242 31-244 (316)
249 3v64_C Agrin; beta propeller, 98.4 0.00031 1E-08 56.5 23.3 199 5-240 74-279 (349)
250 3qqz_A Putative uncharacterize 98.4 0.00016 5.6E-09 55.0 19.6 162 5-195 28-205 (255)
251 2fp8_A Strictosidine synthase; 98.4 8.7E-05 3E-09 58.9 19.1 198 5-237 81-314 (322)
252 3p5b_L Low density lipoprotein 98.3 0.00041 1.4E-08 56.9 23.1 206 5-242 113-326 (400)
253 3v65_B Low-density lipoprotein 98.3 0.00031 1E-08 57.4 22.2 202 5-243 117-325 (386)
254 3mbr_X Glutamine cyclotransfer 98.3 4.9E-05 1.7E-09 57.2 15.8 162 62-246 21-189 (243)
255 1yiq_A Quinohemoprotein alcoho 98.3 6.4E-05 2.2E-09 66.2 19.1 204 17-242 71-344 (689)
256 1k3i_A Galactose oxidase precu 98.3 0.00012 4.1E-09 64.2 19.8 73 8-92 190-275 (656)
257 3sov_A LRP-6, low-density lipo 98.3 0.00043 1.5E-08 54.9 21.3 201 6-242 37-244 (318)
258 3v64_C Agrin; beta propeller, 98.3 0.00089 3E-08 53.8 25.2 186 63-269 74-266 (349)
259 1fwx_A Nitrous oxide reductase 98.3 8.1E-05 2.8E-09 63.2 17.1 150 17-184 16-215 (595)
260 2p4o_A Hypothetical protein; p 98.2 0.00062 2.1E-08 53.5 20.6 223 5-267 33-278 (306)
261 3v65_B Low-density lipoprotein 98.2 0.0016 5.5E-08 53.1 23.2 158 62-238 116-279 (386)
262 2ad6_A Methanol dehydrogenase 98.2 0.00026 8.8E-09 60.9 19.1 113 131-245 311-503 (571)
263 1mda_H Methylamine dehydrogena 98.1 1.5E-05 5.2E-10 64.4 9.9 127 83-236 47-194 (368)
264 1n7d_A LDL receptor, low-densi 98.1 3.5E-05 1.2E-09 67.9 12.5 206 5-242 407-620 (699)
265 4a2l_A BT_4663, two-component 98.1 0.002 6.8E-08 57.8 23.6 203 2-238 308-528 (795)
266 3m0c_C LDL receptor, low-densi 98.1 0.0023 7.9E-08 57.1 23.5 204 5-241 425-637 (791)
267 3sov_A LRP-6, low-density lipo 98.0 0.0027 9.2E-08 50.3 21.2 180 25-237 12-198 (318)
268 4a2l_A BT_4663, two-component 98.0 0.0039 1.3E-07 55.9 24.0 202 3-237 262-481 (795)
269 2xe4_A Oligopeptidase B; hydro 98.0 0.00047 1.6E-08 61.4 17.7 117 58-195 169-305 (751)
270 3p5b_L Low density lipoprotein 98.0 0.0042 1.5E-07 50.8 24.5 184 25-239 91-280 (400)
271 3tc9_A Hypothetical hydrolase; 98.0 0.00075 2.6E-08 55.9 17.3 153 6-194 139-301 (430)
272 1flg_A Protein (quinoprotein e 98.0 0.00069 2.4E-08 58.4 17.6 133 131-265 331-546 (582)
273 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0075 2.6E-07 52.4 24.9 183 24-239 13-200 (628)
274 4hw6_A Hypothetical protein, I 98.0 0.0012 4.1E-08 54.7 18.3 152 6-193 141-303 (433)
275 1ijq_A LDL receptor, low-densi 97.9 0.0044 1.5E-07 48.9 24.3 181 26-237 10-196 (316)
276 1w6s_A Methanol dehydrogenase 97.9 0.0018 6.2E-08 55.9 19.5 134 131-266 318-534 (599)
277 1kv9_A Type II quinohemoprotei 97.9 0.00075 2.6E-08 59.2 17.3 202 17-243 67-340 (668)
278 3v9f_A Two-component system se 97.9 0.0035 1.2E-07 56.1 22.0 198 3-237 362-569 (781)
279 4a0p_A LRP6, LRP-6, low-densit 97.9 0.01 3.5E-07 51.6 23.7 198 5-240 38-241 (628)
280 1kv9_A Type II quinohemoprotei 97.8 0.00068 2.3E-08 59.5 15.8 55 142-197 437-491 (668)
281 3qqz_A Putative uncharacterize 97.8 0.0051 1.7E-07 46.8 20.7 166 58-243 23-210 (255)
282 3kya_A Putative phosphatase; s 97.8 0.0014 4.7E-08 54.9 16.7 162 6-193 141-340 (496)
283 3s94_A LRP-6, low-density lipo 97.8 0.013 4.5E-07 50.9 23.9 199 5-239 41-246 (619)
284 3v9f_A Two-component system se 97.8 0.014 4.6E-07 52.3 23.7 209 3-238 257-480 (781)
285 1n7d_A LDL receptor, low-densi 97.8 0.00082 2.8E-08 59.2 15.4 160 63-237 407-572 (699)
286 3m0c_C LDL receptor, low-densi 97.8 0.019 6.4E-07 51.3 23.5 164 61-239 423-592 (791)
287 2ad6_A Methanol dehydrogenase 97.5 0.0075 2.6E-07 51.9 16.8 56 141-197 442-497 (571)
288 2p4o_A Hypothetical protein; p 97.5 0.025 8.5E-07 44.3 21.4 152 62-236 32-198 (306)
289 1flg_A Protein (quinoprotein e 97.4 0.01 3.5E-07 51.2 16.7 55 142-197 465-519 (582)
290 1w6s_A Methanol dehydrogenase 97.4 0.041 1.4E-06 47.5 20.4 204 17-244 63-350 (599)
291 3s94_A LRP-6, low-density lipo 97.4 0.057 2E-06 46.9 22.5 181 24-237 16-203 (619)
292 2xbg_A YCF48-like protein; pho 97.3 0.03 1E-06 44.4 16.7 153 4-192 163-320 (327)
293 1k3i_A Galactose oxidase precu 97.2 0.01 3.5E-07 51.9 14.7 66 131-196 409-499 (656)
294 3tc9_A Hypothetical hydrolase; 97.2 0.015 5E-07 48.2 14.7 151 63-236 138-301 (430)
295 2vpj_A Kelch-like protein 12; 97.2 0.051 1.7E-06 42.3 17.8 104 132-237 112-232 (301)
296 2vpj_A Kelch-like protein 12; 97.1 0.061 2.1E-06 41.8 17.9 104 132-237 159-279 (301)
297 3sre_A PON1, serum paraoxonase 97.1 0.065 2.2E-06 42.9 17.0 162 6-194 52-252 (355)
298 4hw6_A Hypothetical protein, I 97.1 0.018 6E-07 47.7 14.1 152 62-235 139-303 (433)
299 2p9w_A MAL S 1 allergenic prot 97.1 0.027 9.1E-07 44.4 14.2 156 64-236 15-215 (334)
300 4asc_A Kelch repeat and BTB do 97.0 0.072 2.4E-06 41.8 16.1 104 132-237 98-222 (315)
301 1zgk_A Kelch-like ECH-associat 96.9 0.045 1.5E-06 42.8 14.6 104 132-237 121-241 (308)
302 1tl2_A L10, protein (tachylect 96.9 0.058 2E-06 39.8 13.7 111 63-190 42-159 (236)
303 2xn4_A Kelch-like protein 2; s 96.9 0.1 3.4E-06 40.6 16.4 104 132-237 155-277 (302)
304 3pbp_A Nucleoporin NUP82; beta 96.9 0.098 3.4E-06 42.7 16.1 110 67-194 26-158 (452)
305 3ii7_A Kelch-like protein 7; p 96.9 0.11 3.7E-06 40.5 16.5 185 17-237 13-226 (306)
306 3amr_A 3-phytase; beta-propell 96.8 0.019 6.4E-07 45.7 11.5 101 132-235 39-161 (355)
307 3kya_A Putative phosphatase; s 96.8 0.13 4.5E-06 43.1 17.1 172 6-196 249-477 (496)
308 3ii7_A Kelch-like protein 7; p 96.8 0.13 4.4E-06 40.1 17.0 104 132-237 149-273 (306)
309 2xn4_A Kelch-like protein 2; s 96.7 0.14 4.7E-06 39.8 17.1 104 132-237 108-230 (302)
310 1tl2_A L10, protein (tachylect 96.7 0.07 2.4E-06 39.4 12.6 153 5-186 42-202 (236)
311 2xbg_A YCF48-like protein; pho 96.6 0.18 6.2E-06 39.8 20.4 150 60-233 161-319 (327)
312 3das_A Putative oxidoreductase 96.3 0.29 9.9E-06 39.0 15.9 156 6-181 34-219 (347)
313 1zgk_A Kelch-like ECH-associat 96.3 0.28 9.5E-06 38.2 17.3 63 132-196 168-242 (308)
314 2woz_A Kelch repeat and BTB do 96.3 0.18 6.2E-06 39.5 14.1 63 132-196 109-186 (318)
315 2be1_A Serine/threonine-protei 96.2 0.06 2.1E-06 42.8 10.9 146 17-191 11-181 (339)
316 1cru_A Protein (soluble quinop 95.9 0.47 1.6E-05 39.5 15.2 63 6-78 29-97 (454)
317 4asc_A Kelch repeat and BTB do 95.7 0.55 1.9E-05 36.6 15.7 63 132-196 148-223 (315)
318 2xzh_A Clathrin heavy chain 1; 95.6 0.61 2.1E-05 36.8 16.0 170 3-196 151-334 (365)
319 3pbp_A Nucleoporin NUP82; beta 95.6 0.75 2.6E-05 37.6 17.5 122 63-191 67-209 (452)
320 3a9g_A Putative uncharacterize 95.6 0.69 2.3E-05 37.0 15.4 149 6-181 31-215 (354)
321 2xzh_A Clathrin heavy chain 1; 95.5 0.68 2.3E-05 36.5 22.0 204 9-249 72-303 (365)
322 1bpo_A Protein (clathrin); cla 95.4 0.91 3.1E-05 37.3 23.6 204 9-249 71-302 (494)
323 2uvk_A YJHT; unknown function, 95.2 0.93 3.2E-05 36.0 15.5 49 143-192 168-224 (357)
324 3amr_A 3-phytase; beta-propell 94.8 1.2 4.1E-05 35.5 23.7 193 17-243 41-271 (355)
325 2ism_A Putative oxidoreductase 94.7 1.3 4.3E-05 35.4 23.5 149 6-182 33-221 (352)
326 3ei3_A DNA damage-binding prot 94.6 0.38 1.3E-05 45.0 11.8 132 82-236 864-999 (1158)
327 2ism_A Putative oxidoreductase 94.5 1.5 5.1E-05 35.0 17.9 103 63-182 32-153 (352)
328 3a9g_A Putative uncharacterize 94.4 1.6 5.4E-05 34.9 18.7 102 63-182 30-153 (354)
329 1bpo_A Protein (clathrin); cla 94.3 1.9 6.4E-05 35.6 19.0 170 3-196 150-333 (494)
330 3ei3_A DNA damage-binding prot 94.2 1.7 5.8E-05 40.8 15.1 148 11-194 839-999 (1158)
331 2uvk_A YJHT; unknown function, 94.0 0.84 2.9E-05 36.3 11.5 22 17-38 67-98 (357)
332 2woz_A Kelch repeat and BTB do 94.0 1.7 5.9E-05 33.8 17.1 65 131-197 157-234 (318)
333 2be1_A Serine/threonine-protei 93.9 0.057 1.9E-06 42.9 4.3 111 133-244 10-138 (339)
334 1xi4_A Clathrin heavy chain; a 93.7 1.6 5.3E-05 41.7 13.5 149 67-237 71-236 (1630)
335 2g8s_A Glucose/sorbosone dehyd 93.5 2.3 7.9E-05 33.9 16.4 153 6-180 20-214 (353)
336 3ott_A Two-component system se 93.5 3.9 0.00013 36.3 22.7 191 3-237 62-261 (758)
337 3ott_A Two-component system se 93.3 4.1 0.00014 36.2 22.7 169 4-200 373-551 (758)
338 1cru_A Protein (soluble quinop 93.0 2.5 8.7E-05 35.0 12.9 106 63-183 28-163 (454)
339 3qhy_B Beta-lactamase inhibito 92.2 3.1 0.00011 32.0 18.0 146 63-239 103-249 (282)
340 3sbq_A Nitrous-oxide reductase 92.2 2 6.8E-05 36.6 11.0 112 63-182 324-453 (638)
341 3sre_A PON1, serum paraoxonase 91.7 4.2 0.00015 32.5 16.2 158 63-236 51-252 (355)
342 3s25_A Hypothetical 7-bladed b 90.6 4.9 0.00017 31.2 18.2 106 67-200 109-222 (302)
343 2zwa_A Leucine carboxyl methyl 90.6 8.5 0.00029 33.9 15.8 66 131-196 499-579 (695)
344 1xi4_A Clathrin heavy chain; a 90.0 9.7 0.00033 36.6 14.2 170 3-196 150-333 (1630)
345 2g8s_A Glucose/sorbosone dehyd 88.2 8.5 0.00029 30.6 17.0 107 63-182 19-148 (353)
346 4gq2_M Nucleoporin NUP120; bet 88.1 16 0.00054 33.6 14.9 37 123-160 238-274 (950)
347 3s25_A Hypothetical 7-bladed b 87.9 8.1 0.00028 30.0 14.4 101 128-238 59-178 (302)
348 3qhy_B Beta-lactamase inhibito 87.3 8.4 0.00029 29.5 17.2 183 5-237 25-208 (282)
349 3das_A Putative oxidoreductase 87.1 9.9 0.00034 30.2 19.2 104 62-182 32-158 (347)
350 2wg3_C Hedgehog-interacting pr 84.4 17 0.00057 30.3 13.4 28 63-90 15-44 (463)
351 2zwa_A Leucine carboxyl methyl 83.4 23 0.00079 31.2 15.0 146 17-197 453-638 (695)
352 4fhn_B Nucleoporin NUP120; pro 79.4 8.6 0.00029 36.1 8.9 37 123-160 240-276 (1139)
353 2wg3_C Hedgehog-interacting pr 79.0 27 0.00091 29.0 14.3 28 7-34 17-44 (463)
354 3f7f_A Nucleoporin NUP120; nuc 78.7 8.7 0.0003 33.8 8.1 36 123-161 224-259 (729)
355 3zwu_A Alkaline phosphatase PH 71.1 23 0.0008 30.4 8.7 57 124-181 479-548 (592)
356 3sbq_A Nitrous-oxide reductase 70.3 19 0.00065 30.9 7.8 82 7-91 326-408 (638)
357 4gq2_M Nucleoporin NUP120; bet 67.2 78 0.0027 29.1 14.6 31 62-92 236-267 (950)
358 4a9v_A PHOX; hydrolase, beta-p 66.6 38 0.0013 29.1 8.9 58 123-181 478-548 (592)
359 4fhn_B Nucleoporin NUP120; pro 57.2 30 0.001 32.6 7.4 30 63-92 239-269 (1139)
360 3zwu_A Alkaline phosphatase PH 48.3 53 0.0018 28.3 6.9 18 61-78 530-547 (592)
361 3q6k_A 43.2 kDa salivary prote 46.6 1.1E+02 0.0039 24.6 15.4 153 27-194 124-306 (381)
362 4a9v_A PHOX; hydrolase, beta-p 45.7 1.2E+02 0.0042 26.0 8.6 61 62-140 476-549 (592)
363 3b7f_A Glycosyl hydrolase, BNR 32.6 1.8E+02 0.0063 23.0 17.2 24 3-26 54-77 (394)
364 1q47_A Semaphorin 3A; beta pro 32.6 1.5E+02 0.0051 24.9 7.2 55 135-189 423-487 (495)
365 3f7f_A Nucleoporin NUP120; nuc 31.6 2.8E+02 0.0095 24.7 10.1 28 63-92 223-251 (729)
366 4gz8_A Semaphorin-3A; multi-do 27.7 2.7E+02 0.0091 24.5 8.1 55 135-189 431-495 (667)
367 3nvq_A Semaphorin-7A; beta-pro 24.9 3E+02 0.01 23.8 7.7 56 134-189 381-444 (590)
368 1ukf_A Avirulence protein AVRP 24.2 67 0.0023 22.7 3.1 36 3-38 118-153 (188)
369 3al9_A Plexin-A2; beta-propell 24.0 1.8E+02 0.0061 24.7 6.3 67 123-189 402-476 (539)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6e-37 Score=244.48 Aligned_cols=233 Identities=18% Similarity=0.231 Sum_probs=190.6
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++|+.||+|++||+.+++ ....+ ..|..+|.+++|+|++++|+++ .|
T Consensus 13 ~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~--------------~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 13 SDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV--------------EVRSI-QVTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc--------------eeEEe-eccCCcEEEEEEeCCCCEEEEECCC
Confidence 4689999999986 899999999999999999876 22233 6788999999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc-eEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK-LVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~ 160 (285)
++|++||+.++ +.+..+.+|... |.+++| +|+++++++|+.|++|++||++++. ....+.
T Consensus 77 ~~i~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 77 FRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp SEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred CEEEEEECCCC----------------cEEEEEeCCCCc--EEEEEE-cCCCCEEEEECCCCeEEEEECCCCcchhhhhc
Confidence 99999999988 688889999977 999997 9999999999999999999998774 557788
Q ss_pred cccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCC-CCCcccceeeccccC-CCceEEEeCCCCeEEEEEecc
Q 023246 161 GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPL-PDNAEKIMKANKQGR-EDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 161 ~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~~~~~~s~d~~i~vwd~~~ 236 (285)
+|...|.+++|+| ++.+|++++.|++|++||++.... ..+ ..+...+....+... +..++++++.|+.|++||+++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 9999999999999 578899999999999999976543 222 233344444444332 456899999999999999988
Q ss_pred cccceeE----------eeeccccccCCCCCcCeEEEeecCCCC
Q 023246 237 RQTLAYR----------ERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 237 ~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
++.+..+ .+.|+...+++...++.|.+++...+.
T Consensus 218 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 218 KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 7654443 456666677777788889988877654
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-36 Score=252.43 Aligned_cols=234 Identities=15% Similarity=0.251 Sum_probs=197.6
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
++.+|++++|+|++ .+|++|+.||+|+|||+.+++ ....+ .+|...|++++|+|++++|+++ .
T Consensus 107 h~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l-~~h~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 107 HRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGD--------------FERTL-KGHTDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp CSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCC--------------CCEEE-CCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEEE-eccCCcEEEEEEcCCCCEEEEEeC
Confidence 35689999999985 899999999999999999886 22333 7899999999999999999986 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|++|++||+.+. +.+..+.+|... |.+++| +|+++++++|+.|+.|++||+++++++..+.
T Consensus 171 D~~i~iwd~~~~----------------~~~~~~~~h~~~--V~~v~~-~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 171 DMTIKLWDFQGF----------------ECIRTMHGHDHN--VSSVSI-MPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp TSCCCEEETTSS----------------CEEECCCCCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEeCCCC----------------ceeEEEcCCCCC--EEEEEE-eCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 999999999877 677888889876 999997 9999999999999999999999999999999
Q ss_pred cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccC-------------------CCceE
Q 023246 161 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGR-------------------EDHSR 220 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~-------------------~~~~~ 220 (285)
+|...|.+++++|++.+|++++.|++|++||++.... ..+..|...+..+.+... .+.++
T Consensus 232 ~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 311 (410)
T 1vyh_C 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEE
Confidence 9999999999999999999999999999999987753 456667776666655332 14589
Q ss_pred EEeCCCCeEEEEEeccccccee----------EeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 221 ITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
++++.|+.|++||++++..+.. +.+.+++..+.+...++.|.+++...+.
T Consensus 312 ~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred EEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999987654433 3456667777777788889998876543
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=245.38 Aligned_cols=204 Identities=12% Similarity=0.124 Sum_probs=168.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~ 80 (285)
...|++++|+|++ .+|++|+.|++|++||+.+++ +...+ .+|...|++++|++++. +|+++ .
T Consensus 127 ~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~--------------~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~ 190 (344)
T 4gqb_B 127 DDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV--------------VLSSY-RAHAAQVTCVAASPHKDSVFLSCSE 190 (344)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--------------EEEEE-CCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEEE-cCcCCceEEEEecCCCCCceeeecc
Confidence 4689999999986 899999999999999999886 33333 78999999999999985 67775 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
|++|++||+.++ +....+..+.....+.+++| +| +++++++|+.||.|++||+++++++..+
T Consensus 191 D~~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~~~-~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 191 DNRILLWDTRCP----------------KPASQIGCSAPGYLPTSLAW-HPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp TSCEEEEETTSS----------------SCEEECC----CCCEEEEEE-CSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred cccccccccccc----------------ceeeeeecceeeccceeeee-cCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 999999999887 56666544333234889997 66 5678999999999999999999999999
Q ss_pred ecccccceEeEEcCCC-CeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 160 VGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
.+|...|++++|+|++ ++|++++.|++|++||++.+++..+.+|...+..+.+......++++++.|++|++|++....
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999999999998 469999999999999999888777888999988887754455577899999999999998764
Q ss_pred c
Q 023246 239 T 239 (285)
Q Consensus 239 ~ 239 (285)
.
T Consensus 334 ~ 334 (344)
T 4gqb_B 334 L 334 (344)
T ss_dssp -
T ss_pred C
Confidence 4
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=244.60 Aligned_cols=234 Identities=10% Similarity=0.064 Sum_probs=185.6
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~ 82 (285)
.+|++++|+|+ ..|++|+.||+|+|||+.+++... .......+|...|++++|+|++++|+++ .|+
T Consensus 83 ~~v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~-----------~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~ 149 (344)
T 4gqb_B 83 AGVADLTWVGE--RGILVASDSGAVELWELDENETLI-----------VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI 149 (344)
T ss_dssp SCEEEEEEETT--TEEEEEETTSEEEEEEECTTSSCE-----------EEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEEeCC--CeEEEEECCCEEEEEeccCCCcee-----------EeeccccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 46999999996 478899999999999999886321 1122235899999999999999999996 599
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC-cEEEEecCCCeEEEEecCCCceEEEEe-
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLMV- 160 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~- 160 (285)
+|++||+.++ +.+..+.+|... |.+++| ++++ .++++++.|+.|++||+++++.+..+.
T Consensus 150 ~i~iwd~~~~----------------~~~~~~~~h~~~--V~~~~~-~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 150 CIKVWDLAQQ----------------VVLSSYRAHAAQ--VTCVAA-SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp CEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred eEEEEECCCC----------------cEEEEEcCcCCc--eEEEEe-cCCCCCceeeeccccccccccccccceeeeeec
Confidence 9999999988 788999999977 999997 8877 578999999999999999999988775
Q ss_pred -cccccceEeEEcCC-CCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 161 -GDRHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 161 -~h~~~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
.|...+.+++|+|+ +++|++|+.|++|++||+++++ +..+.+|...+..+.+......++++++.|++|++||+..+
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 45567999999995 4578999999999999998776 46678888888887664444568999999999999999877
Q ss_pred cccee---------Eeeeccccc-cCCCCCcCeEEEeecCCC
Q 023246 238 QTLAY---------RERRYNAAD-FESDEEEGETYLLGFSDS 269 (285)
Q Consensus 238 ~~~~~---------~~~~~~~~~-~~~~~~~~~v~~~~~~~~ 269 (285)
+.... +.++|+... +++...++.|.++.+...
T Consensus 291 ~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 291 ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 54432 245555544 345556677877776554
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=239.66 Aligned_cols=205 Identities=16% Similarity=0.239 Sum_probs=177.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d 81 (285)
...|.+++|+|++ .++++|+.|++|++||+.+++. ...+ ..|...+.+++|+|++++|+++. |
T Consensus 80 ~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~--------------~~~~-~~~~~~~~~~~~spdg~~l~~g~~d 143 (321)
T 3ow8_A 80 QLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQ--------------IKSI-DAGPVDAWTLAFSPDSQYLATGTHV 143 (321)
T ss_dssp SSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--------------EEEE-ECCTTCCCCEEECTTSSEEEEECTT
T ss_pred CCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCE--------------EEEE-eCCCccEEEEEECCCCCEEEEEcCC
Confidence 4679999999975 8999999999999999998862 2222 56777889999999999999975 9
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++|++..+ +....+..+... +.+++| +|++++|++|+.||.|++||+++++.+..+.+
T Consensus 144 g~v~i~~~~~~----------------~~~~~~~~~~~~--v~~~~~-spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 204 (321)
T 3ow8_A 144 GKVNIFGVESG----------------KKEYSLDTRGKF--ILSIAY-SPDGKYLASGAIDGIINIFDIATGKLLHTLEG 204 (321)
T ss_dssp SEEEEEETTTC----------------SEEEEEECSSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CcEEEEEcCCC----------------ceeEEecCCCce--EEEEEE-CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc
Confidence 99999999887 566777777755 999997 99999999999999999999999999999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
|...|.+++|+|++++|++++.|++|++||++.... ..+.+|...+..+.+ .+++.++++++.|+.|++||+.+++.+
T Consensus 205 h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF-CPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 999999999999999999999999999999987763 567778888777765 456678999999999999999887655
Q ss_pred eeE
Q 023246 241 AYR 243 (285)
Q Consensus 241 ~~~ 243 (285)
..+
T Consensus 284 ~~~ 286 (321)
T 3ow8_A 284 HTF 286 (321)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.8e-35 Score=233.73 Aligned_cols=233 Identities=16% Similarity=0.296 Sum_probs=191.0
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++|+.||.|++|++.+++ ....+ .+|...|.+++|+|++++|+++ .|
T Consensus 23 ~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 23 TKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGK--------------FEKTI-SGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcc--------------cchhh-ccCCCceEEEEEcCCCCEEEEECCC
Confidence 5689999999975 899999999999999998775 22222 7899999999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||+.++ +.+..+.+|... |.+++| +|+++++++++.|+.|++||+++++.+..+..
T Consensus 87 ~~i~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 87 KTLKIWDVSSG----------------KCLKTLKGHSNY--VFCCNF-NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp SEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CEEEEEECCCC----------------cEEEEEcCCCCC--EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 99999999887 678889999876 999997 99999999999999999999999999999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
|...|.+++|+|++++|++++.|+.|++||++.+.. ..+.......+......+++.++++++.|+.|++||+++.+.+
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 999999999999999999999999999999987653 3333233333333344667778999999999999999887655
Q ss_pred eeEee-------------eccccccCCCCCcCeEEEeecCCCC
Q 023246 241 AYRER-------------RYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 241 ~~~~~-------------~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
..+.. .++...+..+..++.|++++...++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 228 KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 44321 1233445666777888888877654
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=236.68 Aligned_cols=235 Identities=13% Similarity=0.184 Sum_probs=195.3
Q ss_pred CccceeEEEEcCC---CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE
Q 023246 2 NSIRLNAIVIDPR---NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 78 (285)
Q Consensus 2 ~~~~v~~~~~s~~---~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s 78 (285)
+..+|++++|+|+ ++.+|++|+.|++|+||++..++. .....+.+|...|.+++|++++.++++
T Consensus 31 H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-------------~~~~~l~gh~~~v~~~~~~~~~~~l~s 97 (321)
T 3ow8_A 31 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-------------DLQWSLEGHQLGVVSVDISHTLPIAAS 97 (321)
T ss_dssp SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------------eeeeeeccCCCCEEEEEECCCCCEEEE
Confidence 3578999999984 246999999999999999986642 122223789999999999999999999
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
+ .|++|++||+.++ +.+..+..+... +.+++| +|+++++++++.+|.|++|++++++...
T Consensus 98 ~s~D~~i~lWd~~~~----------------~~~~~~~~~~~~--~~~~~~-spdg~~l~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 98 SSLDAHIRLWDLENG----------------KQIKSIDAGPVD--AWTLAF-SPDSQYLATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp EETTSEEEEEETTTT----------------EEEEEEECCTTC--CCCEEE-CTTSSEEEEECTTSEEEEEETTTCSEEE
T ss_pred EeCCCcEEEEECCCC----------------CEEEEEeCCCcc--EEEEEE-CCCCCEEEEEcCCCcEEEEEcCCCceeE
Confidence 6 4999999999887 677888877765 889997 9999999999999999999999999999
Q ss_pred EEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 158 LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 158 ~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
.+..|...|.+++|+|++++|++++.|+.|++||+++++ +..+.+|...+..+.+ .+++.++++++.|+.|++||++.
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEE-CTTSCEEEEECTTSCEEEEETTT
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEE-cCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999999999999999999999999998776 4567777777766655 55677999999999999999987
Q ss_pred ccccee----------EeeeccccccCCCCCcCeEEEeecCCC
Q 023246 237 RQTLAY----------RERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 237 ~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
.+.... +.+.|++..+.+...++.|.+++...+
T Consensus 238 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 238 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 654433 356667777777777888888887654
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-35 Score=244.19 Aligned_cols=228 Identities=14% Similarity=0.222 Sum_probs=189.1
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+...|++++|+|++ .+|++|+.|++|++||+.+++ +...+ .+|...|.+++|+|++.+|+++ .
T Consensus 149 h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~--------------~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~ 212 (410)
T 1vyh_C 149 HTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFE--------------CIRTM-HGHDHNVSSVSIMPNGDHIVSASR 212 (410)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSC--------------EEECC-CCCSSCEEEEEECSSSSEEEEEET
T ss_pred cCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc--------------eeEEE-cCCCCCEEEEEEeCCCCEEEEEeC
Confidence 35689999999975 899999999999999998775 33333 7899999999999999999886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|++|++||+.++ ..+..+.+|... |.++.+ +++++++++|+.|+.|++||+.++++...+.
T Consensus 213 D~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~ 273 (410)
T 1vyh_C 213 DKTIKMWEVQTG----------------YCVKTFTGHREW--VRMVRP-NQDGTLIASCSNDQTVRVWVVATKECKAELR 273 (410)
T ss_dssp TSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCeEEEEECCCC----------------cEEEEEeCCCcc--EEEEEE-CCCCCEEEEEcCCCeEEEEECCCCceeeEec
Confidence 999999999987 688889999876 999997 9999999999999999999999999999999
Q ss_pred cccccceEeEEcCC--------------------CCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCce
Q 023246 161 GDRHVVNQLEPHPH--------------------IPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHS 219 (285)
Q Consensus 161 ~h~~~v~~~~~~p~--------------------~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 219 (285)
+|...|.+++|+|+ +.+|++|+.|++|++||++.+. +..+.+|...+..+.+ .+++.+
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~-~~~g~~ 352 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-HSGGKF 352 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSSSSC
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE-cCCCCE
Confidence 99999999999996 6689999999999999998775 4566778777766654 556778
Q ss_pred EEEeCCCCeEEEEEecccccceeE----------eeeccccccCCCCCcCeEEEee
Q 023246 220 RITLTPDVIMHVLRLQRRQTLAYR----------ERRYNAADFESDEEEGETYLLG 265 (285)
Q Consensus 220 ~~~~s~d~~i~vwd~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~ 265 (285)
+++++.|+.|++||+...+.+..+ .+.+++..++++..++.|.+++
T Consensus 353 l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 353 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 999999999999999887665444 2333444444444444554443
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=237.62 Aligned_cols=201 Identities=19% Similarity=0.308 Sum_probs=169.4
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~ 82 (285)
.+|++++|+|++ .+||+|+.|++|+|||+.+++.. +...+..+|...|++++|+|++++|++++ |+
T Consensus 17 ~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~------------~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 17 SRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWI------------CKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp SCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEE------------EEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcce------------eeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 379999999986 89999999999999999876421 22233368999999999999999999965 99
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc---eEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK---LVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~ 159 (285)
+|++|+..... .+.+..+.+|... |.+++| +|++++|++++.|+.|++||++++. ++..+
T Consensus 84 ~v~iw~~~~~~--------------~~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 84 TTCIWKKNQDD--------------FECVTTLEGHENE--VKSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp CEEEEEECCC---------------EEEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred cEEEEEccCCC--------------eEEEEEccCCCCC--ceEEEE-eCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 99999987641 1245778889877 999997 9999999999999999999998764 45677
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC---CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
.+|...|.+++|+|++++|++++.|++|++|+.+... ...+.+|...+..+.+ .+++.++++++.|+.|++|+..
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~-sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-DPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEEEE
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE-CCCCCEEEEEeCCCeEEEeccc
Confidence 8899999999999999999999999999999987653 3467778888877765 5567789999999999999974
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-34 Score=234.99 Aligned_cols=234 Identities=11% Similarity=0.126 Sum_probs=191.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++|+.||+|++||+.+++ ....+ ..|...|.+++|+|++++|+++ .|
T Consensus 55 ~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~--------------~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 55 LAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTN--------------KVHAI-PLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCC--------------EEEEE-ECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCC--------------cceEe-ecCCccEEEEEECCCCCEEEEEeCC
Confidence 5689999999985 899999999999999998876 22222 6788899999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++|++.+.. ........+.+|... +.++.| ++++. +++++.|+.|++||+++++.+..+.+
T Consensus 119 ~~v~iw~~~~~~------------~~~~~~~~~~~h~~~--v~~~~~-~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~ 182 (340)
T 1got_B 119 NICSIYNLKTRE------------GNVRVSRELAGHTGY--LSCCRF-LDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG 182 (340)
T ss_dssp CEEEEEETTTCS------------BSCEEEEEEECCSSC--EEEEEE-EETTE-EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CeEEEEECccCC------------CcceeEEEecCCCcc--EEEEEE-CCCCc-EEEEECCCcEEEEECCCCcEEEEEcC
Confidence 999999997651 011244567788866 999997 77665 88999999999999999999999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
|...|.+++|+|+++++++++.|++|++||++.+. ...+.+|...+..+.+ .+++.++++++.|+.|++||++..+.+
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF-FPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE-cCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 99999999999999999999999999999998776 4567778877776655 456778999999999999999876443
Q ss_pred e------------eEeeeccccccCCCCCcCeEEEeecCCC
Q 023246 241 A------------YRERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 241 ~------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
. .+.+++++..+..+..++.+.+++...+
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 2 2345666777777777778888876554
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-34 Score=226.84 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=184.7
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s~ 79 (285)
+...|++++|+|++ .+||+|+.|++|+|||+..... . ... .+.+|.++|.+++|+++ +++|+++
T Consensus 8 h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-------~-----~~~-~l~gH~~~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 8 HNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-------K-----LID-TLTGHEGPVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-------C-----CCE-EECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred CcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-------E-----EEE-EEccccCCeEEEEecCCCcCCEEEEE
Confidence 35789999999985 8999999999999999975421 0 222 23789999999999864 7899886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC--CcEEEEecCCCeEEEEecCCCc--
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK-- 154 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~-- 154 (285)
.|++|++||+.++. ...+..+..|... |.+++| +|+ +++|++++.|+.|++||++++.
T Consensus 74 s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 74 SYDGKVMIWKEENGR--------------WSQIAVHAVHSAS--VNSVQW-APHEYGPMLLVASSDGKVSVVEFKENGTT 136 (297)
T ss_dssp ETTTEEEEEEBSSSC--------------BCCCEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEEBCSSSCB
T ss_pred cCCCEEEEEEcCCCc--------------eEEEEEeecCCCc--eeEEEe-CcCCCCcEEEEEECCCcEEEEEecCCCce
Confidence 59999999998651 1245667778866 999997 887 8899999999999999998763
Q ss_pred eEEEEecccccceEeEEcCC-------------CCeEEEEecCCcEEEEcCCCCC-----CCCCCCCcccceeeccccCC
Q 023246 155 LVRLMVGDRHVVNQLEPHPH-------------IPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQGRE 216 (285)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~p~-------------~~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~ 216 (285)
....+.+|...|.+++|+|+ +++|++++.|++|++||++... ...+.+|...+..+.+.+..
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 24567789999999999997 4689999999999999997654 24577888888888775432
Q ss_pred --CceEEEeCCCCeEEEEEecccc------c---------ceeEeeeccccccCCCCCcCeEEEeecC
Q 023246 217 --DHSRITLTPDVIMHVLRLQRRQ------T---------LAYRERRYNAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 217 --~~~~~~~s~d~~i~vwd~~~~~------~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 267 (285)
..++++++.|+.|++||++... . +..+.+++++..++....++.|.+++..
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 4789999999999999987632 1 1123566777777777777778877654
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-34 Score=231.70 Aligned_cols=211 Identities=15% Similarity=0.234 Sum_probs=177.0
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
+.++|++++|+|+++++|++|+.|++|++|++...... .. .+...+.+|...|.+++|+|++++|++++
T Consensus 16 H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~---------~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK---------FG-VPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE---------EE-EEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc---------cc-ccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 45789999999976689999999999999999753210 00 11222378999999999999999999964
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|++|++||+.++ +.+..+.+|... |.+++| +|+++++++|+.|+.|++||++ ++++..+.
T Consensus 86 D~~v~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~ 145 (319)
T 3frx_A 86 DKTLRLWDVATG----------------ETYQRFVGHKSD--VMSVDI-DKKASMIISGSRDKTIKVWTIK-GQCLATLL 145 (319)
T ss_dssp TSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSCEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred CCEEEEEECCCC----------------CeeEEEccCCCc--EEEEEE-cCCCCEEEEEeCCCeEEEEECC-CCeEEEEe
Confidence 999999999988 678889999977 999997 9999999999999999999997 67888899
Q ss_pred cccccceEeEEcCCC------CeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEE
Q 023246 161 GDRHVVNQLEPHPHI------PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~------~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
+|...|.+++|+|.. ..+++++.|++|++||++.... ..+.+|...+..+.+ .+++.++++++.|+.|++||
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~-sp~g~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA-SPDGTLIASAGKDGEIMLWN 224 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEE-CTTSSEEEEEETTCEEEEEE
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEE-cCCCCEEEEEeCCCeEEEEE
Confidence 999999999999954 4799999999999999987653 456678887776654 55777999999999999999
Q ss_pred ecccccceeE
Q 023246 234 LQRRQTLAYR 243 (285)
Q Consensus 234 ~~~~~~~~~~ 243 (285)
+.+.+.+..+
T Consensus 225 ~~~~~~~~~~ 234 (319)
T 3frx_A 225 LAAKKAMYTL 234 (319)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCcEEEEe
Confidence 9887665544
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.8e-34 Score=231.47 Aligned_cols=239 Identities=11% Similarity=0.131 Sum_probs=193.1
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
+..+|++++|+|++ .+|++|+.||+|+|||..+++ ....+ ..|...|.+++|+|++.+|+++.
T Consensus 63 H~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~--------------~~~~~-~~~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 63 HGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTN--------------KEHAV-TMPCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------EEEEE-ECSSSCCCEEEECTTSSEEEEEST
T ss_pred CCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCC--------------cceEE-ecCCCCEEEEEECCCCCEEEEeeC
Confidence 35689999999986 899999999999999998775 22222 56778899999999999999965
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|+.+++|++...... ........+..|... |.+++| +++++.+++++.|++|++||+++++++..+.
T Consensus 127 d~~i~v~~~~~~~~~----------~~~~~~~~~~~h~~~--v~~~~~-~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNE----------NMAAKKKSVAMHTNY--LSACSF-TNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp TSEEEEEECCCCTTC----------CSGGGCEEEEECSSC--EEEEEE-CSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEeccccc----------cccccceeeeccCCc--EEEEEE-eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 999999998654100 011345667788866 999997 9999999999999999999999999999999
Q ss_pred cccccceEeEEcC--CCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 161 GDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 161 ~h~~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+|...|.+++|+| ++++|++++.|++|++||++.+. +..+..|...+..+.+ .+++.++++++.|+.|++||++..
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY-YPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE-eCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999988 46799999999999999998876 4566778877777655 456678999999999999999875
Q ss_pred ccce------------eEeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 238 QTLA------------YRERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 238 ~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
+.+. .+.+++++..+..+..++.+.+++...+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 273 REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 4332 23456666677777777788888876553
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5e-34 Score=231.08 Aligned_cols=209 Identities=15% Similarity=0.238 Sum_probs=172.1
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecC
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 81 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d 81 (285)
+...|.+++|+|++ .+|++|+.|+.|++|++.+.+.. ......+.+|...|.++.|++++.+++++.|
T Consensus 96 ~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d 163 (340)
T 1got_B 96 RSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGN-----------VRVSRELAGHTGYLSCCRFLDDNQIVTSSGD 163 (340)
T ss_dssp SSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBS-----------CEEEEEEECCSSCEEEEEEEETTEEEEEETT
T ss_pred CCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCc-----------ceeEEEecCCCccEEEEEECCCCcEEEEECC
Confidence 34578999999975 89999999999999999865411 0112223689999999999999886666779
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
++|++||+.++ +.+..+.+|... |.+++| +|+++++++|+.|+.|++||+++++++..+.+
T Consensus 164 ~~i~~wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 164 TTCALWDIETG----------------QQTTTFTGHTGD--VMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp SCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CcEEEEECCCC----------------cEEEEEcCCCCc--eEEEEE-CCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 99999999887 677888889877 999997 99999999999999999999999999999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCC--CCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP--DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
|...|.+++|+|++++|++++.|++|++||++.... ..+. .+...+..+. ..+++.++++++.|+.|++||+.+.+
T Consensus 225 h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS-FSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEE-ECCCCCEEEEECCCCeEEEEEcccCc
Confidence 999999999999999999999999999999987653 2222 1222344443 35677899999999999999988766
Q ss_pred ccee
Q 023246 239 TLAY 242 (285)
Q Consensus 239 ~~~~ 242 (285)
.+..
T Consensus 304 ~~~~ 307 (340)
T 1got_B 304 RAGV 307 (340)
T ss_dssp EEEE
T ss_pred EeeE
Confidence 5443
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-34 Score=238.42 Aligned_cols=249 Identities=12% Similarity=0.110 Sum_probs=182.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
.++|++++|+|++ .+|++|+.||+|+|||+.+++. ...+ ..|...|.+++|+|++++|+++ .|
T Consensus 66 ~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~--------------~~~~-~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 66 SGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQK--------------THAI-KLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp SSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEE--------------EEEE-ECCCTTCCCCEECTTSSEEEECCSS
T ss_pred ccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcc--------------ceEE-ecCCCCEEEEEECCCCCEEEEeeCC
Confidence 5789999999975 8999999999999999988762 2222 5677788888888888888885 48
Q ss_pred CcEEEEEcCCCCC----------------------------------CCCCCCCCccccCCCCceEe-----ecccCcee
Q 023246 82 ELVYLFEKNMGLG----------------------------------PSPLSLSPEDLQKREEPQVY-----SGHRNSQT 122 (285)
Q Consensus 82 ~~i~iwd~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 122 (285)
+.+++|++..... .....+..+++.+.+.+..+ .+|...
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~-- 207 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTAD-- 207 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSC--
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccC--
Confidence 8888888754210 00111122223333444444 456655
Q ss_pred eeeEEEecCCCcEEEEecCCCeEEEEecC-CCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCC
Q 023246 123 VKGVNFFGPNDEYVMSGSDCGHLFIWKKK-GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL 200 (285)
Q Consensus 123 i~~~~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~ 200 (285)
+.+++|.+++++++++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|++|++||++.+.. ..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 89999744588999999999999999998 4578889999999999999999999999999999999999987642 222
Q ss_pred CCCc------ccceeeccccCCCceEEEeCCCCeEEEEEecccccce--------------eEeeeccccccCCCCCcCe
Q 023246 201 PDNA------EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA--------------YRERRYNAADFESDEEEGE 260 (285)
Q Consensus 201 ~~~~------~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~ 260 (285)
..+. ...+......++++++++++.||.|++||+...+... .+.+++++..++.++.++.
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 1111 1112223345677899999999999999986554332 2356677777888888888
Q ss_pred EEEeecCCC
Q 023246 261 TYLLGFSDS 269 (285)
Q Consensus 261 v~~~~~~~~ 269 (285)
+.++++...
T Consensus 368 i~iW~~~~~ 376 (380)
T 3iz6_a 368 LKIWAFSGH 376 (380)
T ss_dssp EEEEECCSS
T ss_pred EEEEecCCC
Confidence 888887754
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-34 Score=229.78 Aligned_cols=206 Identities=18% Similarity=0.186 Sum_probs=172.0
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++|+|++ ++|++|+.|++|++||+.+++ ....+ .+|...|++++|+|++.+|+++ .|
T Consensus 55 ~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 55 ETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE--------------KVVDF-EAHPDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp SSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC--------------EEEEE-ECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCc--------------EEEEE-eCCCCcEEEEEEcCCCCEEEEECCC
Confidence 4679999999975 899999999999999999886 33333 7899999999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
++|++||+..+. .....+.+|... |.+++| +| ++.++++|+.|+.|++||++++.....+.
T Consensus 119 ~~v~lWd~~~~~---------------~~~~~~~~h~~~--v~~v~~-~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 180 (304)
T 2ynn_A 119 LTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF-NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180 (304)
T ss_dssp SCEEEEEGGGTT---------------EEEEEECCCCSC--EEEEEE-CTTCTTEEEEEETTSEEEEEETTCSSCSEEEE
T ss_pred CeEEEEECCCCc---------------chhhhhcccCCc--EEEEEE-CCCCCCEEEEEeCCCeEEEEECCCCCccceec
Confidence 999999997651 345677888876 999997 87 67899999999999999998877665554
Q ss_pred -cccccceEeEEcC--CCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 161 -GDRHVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 161 -~h~~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
.|...+..++|+| ++++|++++.|++|++||++.+. +..+.+|...+..+.+ .++..++++++.|+.|++||+.+
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~-~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF-HPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSSSSEEEEEETTSCEEEEETTT
T ss_pred cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE-CCCCCEEEEEcCCCeEEEEECCC
Confidence 5667899999987 67799999999999999998775 4667778877766654 55667899999999999999988
Q ss_pred cccceeE
Q 023246 237 RQTLAYR 243 (285)
Q Consensus 237 ~~~~~~~ 243 (285)
.+.+..+
T Consensus 260 ~~~~~~~ 266 (304)
T 2ynn_A 260 YKVEKTL 266 (304)
T ss_dssp CCEEEEE
T ss_pred Cceeeec
Confidence 7766554
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.6e-34 Score=231.40 Aligned_cols=240 Identities=12% Similarity=0.109 Sum_probs=179.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeC------CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGS------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 76 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l 76 (285)
...|++++|+||| .+||+|+. |+.|++|+..++.... .......+|...|++++|+|++.++
T Consensus 42 ~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~V~~~~~s~d~~~l 109 (357)
T 4g56_B 42 EVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNE-----------SLCTAGVQTEAGVTDVAWVSEKGIL 109 (357)
T ss_dssp CSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CG-----------GGCSEEEECSSCEEEEEEETTTEEE
T ss_pred cCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCcce-----------eEecccCCCCCCEEEEEEcCCCCEE
Confidence 4679999999986 89999997 7789999987765211 1111124688899999999999988
Q ss_pred EEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceE
Q 023246 77 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV 156 (285)
Q Consensus 77 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 156 (285)
+++.|++|+|||+.++... ........+|... |.+++| +|++++|++|+.|+.|++||+++++++
T Consensus 110 ~~s~dg~v~lWd~~~~~~~------------~~~~~~~~~h~~~--V~~v~~-spdg~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 110 VASDSGAVELWEILEKESL------------LVNKFAKYEHDDI--VKTLSV-FSDGTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp EEETTSCEEEC--------------------CCCCEEECCCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEECCCEEEEeecccccee------------EEEeeccCCCCCC--EEEEEE-CCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8888999999999876200 0112234467766 999997 999999999999999999999999999
Q ss_pred EEEecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCCC-C--CCCCCcccceeeccccCCCceEEEeCCCCeEEEE
Q 023246 157 RLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTDF-P--PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVL 232 (285)
Q Consensus 157 ~~~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vw 232 (285)
..+.+|...|.+++|+|++. ++++++.|++|++||++.++. . .+..+...+..+.+.+....++++++.|+.|++|
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 99999999999999999886 689999999999999987753 2 2333455566665544456688999999999999
Q ss_pred EecccccceeE----------eeecccc-ccCCCCCcCeEEEeecCCC
Q 023246 233 RLQRRQTLAYR----------ERRYNAA-DFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 233 d~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~v~~~~~~~~ 269 (285)
|+++.+.+..+ .++++.. .+++...++.|.+++...+
T Consensus 255 d~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 255 NIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp ESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred ECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 99887655443 3455543 4566666777888876654
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.5e-34 Score=234.24 Aligned_cols=204 Identities=12% Similarity=0.114 Sum_probs=168.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEE-ec
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLIS-YN 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s-~~ 80 (285)
...|++++|+|++ .+|++|+.|++|++||+.+++ ....+ .+|...|++++|++++. ++++ +.
T Consensus 139 ~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~--------------~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 139 DDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA--------------VLKSY-NAHSSEVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp SSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE--------------EEEEE-CCCSSCEEEEEECTTCSSCEEEEET
T ss_pred CCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEEE-cCCCCCEEEEEEccCCCceeeeecc
Confidence 4679999999985 899999999999999999886 33333 78999999999999885 6666 46
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-CcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
|++|++||+.++ +....+..+.....+.+++| +|+ +.++++|+.|+.|++||+++++++..+
T Consensus 203 dg~v~~wd~~~~----------------~~~~~~~~~~~~~~v~~v~~-sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 203 DGRILLWDTRKP----------------KPATRIDFCASDTIPTSVTW-HPEKDDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp TSCEEECCTTSS----------------SCBCBCCCTTCCSCEEEEEE-CTTSTTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred CCceEEEECCCC----------------ceeeeeeeccccccccchhh-hhcccceEEEeecccceeEEECCCCcEeEEE
Confidence 999999999877 44444443333234899997 776 578899999999999999999999999
Q ss_pred ecccccceEeEEcCCC-CeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 160 VGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
.+|...|++++|+|++ ++|++++.|++|++||++.+++....+|...+..+.+.+.++.++++++.|++|++|++.+..
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 9999999999999987 469999999999999999888766667888888887654567799999999999999997653
Q ss_pred c
Q 023246 239 T 239 (285)
Q Consensus 239 ~ 239 (285)
.
T Consensus 346 ~ 346 (357)
T 4g56_B 346 R 346 (357)
T ss_dssp -
T ss_pred c
Confidence 3
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-34 Score=229.87 Aligned_cols=240 Identities=16% Similarity=0.219 Sum_probs=172.6
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
+..+|++++|+|++ .+|++|+.|++|+|||+...... .........+.+|...|.+++|+|++++|++++
T Consensus 57 h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~--------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 57 HKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADR--------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp CCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred ccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCc--------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 35689999999985 89999999999999998643210 000012223378999999999999999999965
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCC--ceEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG--KLVRL 158 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~--~~~~~ 158 (285)
|++|++||+.... ...+.+..+.+|... |.+++| +|++++|++++.|+.|++||..++ +++..
T Consensus 128 D~~v~iwd~~~~~------------~~~~~~~~~~~h~~~--v~~v~~-~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 128 DKSVWIWETDESG------------EEYECISVLQEHSQD--VKHVIW-HPSEALLASSSYDDTVRIWKDYDDDWECVAV 192 (330)
T ss_dssp TSCEEEEECCTTC------------CCCEEEEEECCCSSC--EEEEEE-CSSSSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEeccCCC------------CCeEEEEEeccCCCc--eEEEEE-CCCCCEEEEEcCCCeEEEEECCCCCeeEEEE
Confidence 9999999995320 011345677888876 999997 999999999999999999998766 67888
Q ss_pred EecccccceEeEEcCC--CCeEEEEecCCcEEEEcCCCCC---------CCCCCC-CcccceeeccccCCCceEEEeCCC
Q 023246 159 MVGDRHVVNQLEPHPH--IPMFATCGIEKTVKLWAPMPTD---------FPPLPD-NAEKIMKANKQGREDHSRITLTPD 226 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~--~~~l~t~~~d~~i~iwd~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~d 226 (285)
+.+|...|.+++|+|+ +.+|++++.|++|++|+++... ...+.. |...+..+.+. .+.++++++.|
T Consensus 193 ~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s--~~~~l~s~~~d 270 (330)
T 2hes_X 193 LNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG--FNGLIASVGAD 270 (330)
T ss_dssp ECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC--TTSCEEEEETT
T ss_pred ccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc--CCCEEEEEeCC
Confidence 9999999999999998 6689999999999999986531 122333 66667666654 34589999999
Q ss_pred CeEEEEEeccccc--c------------eeEeeec--cccccCCCCCcCeEEEeecC
Q 023246 227 VIMHVLRLQRRQT--L------------AYRERRY--NAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 227 ~~i~vwd~~~~~~--~------------~~~~~~~--~~~~~~~~~~~~~v~~~~~~ 267 (285)
+.|++|+...++. . ..+.+.+ ++..+++...++.|.+++.+
T Consensus 271 g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 271 GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 9999999876421 1 1112333 34455566666667776654
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-33 Score=227.16 Aligned_cols=227 Identities=12% Similarity=0.166 Sum_probs=180.5
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .+|++|+.|++|++||+.+++ ....+ .+|...|.+++|+|++.+|+++ .|
T Consensus 65 ~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D 128 (319)
T 3frx_A 65 SHIVQDCTLTADG-AYALSASWDKTLRLWDVATGE--------------TYQRF-VGHKSDVMSVDIDKKASMIISGSRD 128 (319)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEECTTSCEEEEEETT
T ss_pred cccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC--------------eeEEE-ccCCCcEEEEEEcCCCCEEEEEeCC
Confidence 5689999999985 899999999999999999886 22333 7899999999999999999996 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC------CcEEEEecCCCeEEEEecCCCce
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN------DEYVMSGSDCGHLFIWKKKGGKL 155 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~l~~~~~dg~v~vwd~~~~~~ 155 (285)
++|++||+.. +.+..+.+|... +.++.+ .|. +..+++++.|+.|++||+++.+.
T Consensus 129 ~~i~vwd~~~-----------------~~~~~~~~h~~~--v~~~~~-~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 129 KTIKVWTIKG-----------------QCLATLLGHNDW--VSQVRV-VPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp SCEEEEETTS-----------------CEEEEECCCSSC--EEEEEE-CCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEECCC-----------------CeEEEEeccCCc--EEEEEE-ccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 9999999975 367788888876 999997 774 44899999999999999999999
Q ss_pred EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 156 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
...+.+|...|.+++|+|++++|++++.|++|++||++.++. ..+. +...+..+.+ .++..++++++ +..+++|++
T Consensus 189 ~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~-sp~~~~la~~~-~~~i~v~~~ 265 (319)
T 3frx_A 189 EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAF-SPNRYWLAAAT-ATGIKVFSL 265 (319)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEE-CSSSSEEEEEE-TTEEEEEEE
T ss_pred heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEE-cCCCCEEEEEc-CCCcEEEEe
Confidence 999999999999999999999999999999999999987763 3333 3344555543 44555555555 556999998
Q ss_pred cccccce------------------eEeeeccccccCCCCCcCeEEEeecCC
Q 023246 235 QRRQTLA------------------YRERRYNAADFESDEEEGETYLLGFSD 268 (285)
Q Consensus 235 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~ 268 (285)
.....+. .+.++|++..+.++..++.|.+++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 266 DPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 7653322 235566666777666677777766543
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=226.96 Aligned_cols=238 Identities=16% Similarity=0.257 Sum_probs=181.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|.+++|+|++ .+|++|+.|++++||++..+... +.. .+.+|...|.+++|+|++++|+++ .|
T Consensus 61 ~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~~------------~~~-~~~~h~~~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 61 QRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDFE------------CVT-TLEGHENEVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-EE------------EEE-EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCeE------------EEE-EccCCCCCceEEEEeCCCCEEEEEECC
Confidence 4679999999985 89999999999999999866421 222 237899999999999999999996 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc--eEEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK--LVRLM 159 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~ 159 (285)
++|++||+.... ....+..+..|... |.+++| +|++++|++++.|+.|++||.++++ +...+
T Consensus 127 ~~v~iwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~-~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 127 KSVWVWEVDEED-------------EYECVSVLNSHTQD--VKHVVW-HPSQELLASASYDDTVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SCEEEEEECTTS-------------CEEEEEEECCCCSC--EEEEEE-CSSSSCEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CeEEEEECCCCC-------------CeEEEEEecCcCCC--eEEEEE-CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe
Confidence 999999997651 11235567788866 999997 9999999999999999999998775 45788
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CC---------------CCCC-CcccceeeccccCCCceEEE
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FP---------------PLPD-NAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~---------------~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (285)
.+|...|.+++|+|++++|++++.|++|++|+..... .. .+.+ |...+..+.+ .+....+++
T Consensus 191 ~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~~~~~~l~s 269 (345)
T 3fm0_A 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW-CQLTGALAT 269 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE-CTTTCCEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE-ecCCCEEEE
Confidence 8999999999999999999999999999999963221 11 1112 4445555544 445668999
Q ss_pred eCCCCeEEEEEeccccc-------------------ceeEeeecccc-ccCCCCCcCeEEEeecCCCCC
Q 023246 223 LTPDVIMHVLRLQRRQT-------------------LAYRERRYNAA-DFESDEEEGETYLLGFSDSDA 271 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~~~-------------------~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 271 (285)
++.|+.|++|+...... +..+.+.|+.. .+++...++.|.+++...+..
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 99999999999865321 12234556553 566777778888887766543
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=226.41 Aligned_cols=209 Identities=16% Similarity=0.239 Sum_probs=162.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCccccccccc-CCCCCcceEEEEEecCCCEEEEe-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSNTSELLISY- 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~s~~~~~l~s~- 79 (285)
+..+|++++|+|+ +||+|+.|++|++||+..+... ....+ ..+|...|.+++|+|++++|+++
T Consensus 13 h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~------------~~~~~~~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 13 YKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT------------LIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp CSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE------------EEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE------------EEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence 3578999999984 9999999999999999865310 11222 13499999999999999999996
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCC----Cce
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG----GKL 155 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~----~~~ 155 (285)
.|++|++|++..... .....+.+..+.+|... |.+++| +|++++|++|+.|+.|++||++. .++
T Consensus 78 ~D~~v~iw~~~~~~~---------~~~~~~~~~~~~~h~~~--V~~v~~-sp~g~~las~s~D~~v~iwd~~~~~~~~~~ 145 (330)
T 2hes_X 78 FDSTVSIWAKEESAD---------RTFEMDLLAIIEGHENE--VKGVAW-SNDGYYLATCSRDKSVWIWETDESGEEYEC 145 (330)
T ss_dssp TTSCEEEEEC----------------CCCEEEEEEC----C--EEEEEE-CTTSCEEEEEETTSCEEEEECCTTCCCCEE
T ss_pred CCCcEEEEEcccCcC---------ccccceeEEEEcCCCCc--EEEEEE-CCCCCEEEEEeCCCEEEEEeccCCCCCeEE
Confidence 499999999854310 00011355678888876 999997 99999999999999999999943 246
Q ss_pred EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCC---CCCCCCCCcccceeeccccCC-CceEEEeCCCCeEEE
Q 023246 156 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT---DFPPLPDNAEKIMKANKQGRE-DHSRITLTPDVIMHV 231 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~d~~i~v 231 (285)
+..+.+|...|.+++|+|++.+|++++.|++|++|+.... .+..+.+|...+..+.+.... ...+++++.|++|++
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i 225 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE
Confidence 7788899999999999999999999999999999998654 345677888888777664432 457899999999999
Q ss_pred EEeccc
Q 023246 232 LRLQRR 237 (285)
Q Consensus 232 wd~~~~ 237 (285)
||+...
T Consensus 226 w~~~~~ 231 (330)
T 2hes_X 226 WKYMGD 231 (330)
T ss_dssp EEEEEE
T ss_pred EEecCC
Confidence 998764
No 23
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-33 Score=234.12 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=165.8
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEec-C
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYN-D 81 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~~-d 81 (285)
.+|+|++|+|.++.+||+|+.||+|+|||+.+++.. ......+|.+.|++++|+| ++.+|++++ |
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-------------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-------------TFIKGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-------------EEECCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-------------eEEEccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 469999999977789999999999999999877521 1112268999999999998 678888865 9
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
++|++||+.+. ....+. .+.....+.+++| ++++++|++|+.||.|++||++ ++.+..+.
T Consensus 187 ~~v~iwd~~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~ 247 (435)
T 4e54_B 187 GTTRLQDFKGN-----------------ILRVFASSDTINIWFCSLDV-SASSRMVVTGDNVGNVILLNMD-GKELWNLR 247 (435)
T ss_dssp SCEEEEETTSC-----------------EEEEEECCSSCSCCCCCEEE-ETTTTEEEEECSSSBEEEEESS-SCBCCCSB
T ss_pred CEEEEeeccCC-----------------ceeEEeccCCCCccEEEEEE-CCCCCEEEEEeCCCcEeeeccC-cceeEEEe
Confidence 99999999765 333333 3333334788997 9999999999999999999997 56777888
Q ss_pred cccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCCC----CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 161 GDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTDF----PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
+|...|.+++|+|++. +|++++.|++|++||++.... ....+|...+..+.+ .+++.++++++.|+.|++||+.
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF-SPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB-CTTSSEEEEEESSSCEEEEESS
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeE-CCCCCeeEEEcCCCEEEEEECC
Confidence 9999999999999987 588999999999999976542 233456777766654 5567799999999999999998
Q ss_pred ccccceeE
Q 023246 236 RRQTLAYR 243 (285)
Q Consensus 236 ~~~~~~~~ 243 (285)
+...+..+
T Consensus 327 ~~~~~~~~ 334 (435)
T 4e54_B 327 QWDCPLGL 334 (435)
T ss_dssp SSSSEEEE
T ss_pred CCccceEE
Confidence 87655443
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-33 Score=229.41 Aligned_cols=202 Identities=17% Similarity=0.290 Sum_probs=164.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~ 83 (285)
.|++++|+|++ .+|++|+.|++|+|||+.+++ .... +.+|...|.+++|+|++++|+++ .|++
T Consensus 125 ~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~--------------~~~~-~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 188 (393)
T 1erj_A 125 YIRSVCFSPDG-KFLATGAEDRLIRIWDIENRK--------------IVMI-LQGHEQDIYSLDYFPSGDKLVSGSGDRT 188 (393)
T ss_dssp BEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--------------EEEE-ECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--------------EEEE-EccCCCCEEEEEEcCCCCEEEEecCCCc
Confidence 38999999986 899999999999999998875 2222 27899999999999999999886 5999
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEE---
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM--- 159 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~--- 159 (285)
|++||+.++ +....+.. ... +.+++| +| +++++++|+.|+.|++||+++++.+..+
T Consensus 189 v~iwd~~~~----------------~~~~~~~~-~~~--v~~~~~-~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~ 248 (393)
T 1erj_A 189 VRIWDLRTG----------------QCSLTLSI-EDG--VTTVAV-SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 248 (393)
T ss_dssp EEEEETTTT----------------EEEEEEEC-SSC--EEEEEE-CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred EEEEECCCC----------------eeEEEEEc-CCC--cEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc
Confidence 999999877 45555553 333 889997 77 8999999999999999999999888776
Q ss_pred ----ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-------------CCCCCCcccceeeccccCCCceEEE
Q 023246 160 ----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-------------PPLPDNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 160 ----~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
.+|...|.+++|+|++++|++++.|++|++||++.... ..+.+|...+..+.+ .+++.++++
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~s 327 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT-TQNDEYILS 327 (393)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE-CGGGCEEEE
T ss_pred ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE-CCCCCEEEE
Confidence 57899999999999999999999999999999875421 223456665655544 455678999
Q ss_pred eCCCCeEEEEEecccccceeE
Q 023246 223 LTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~~~~~~~ 243 (285)
++.|+.|++||+.+++.+..+
T Consensus 328 gs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 328 GSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp EETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEE
Confidence 999999999999887665544
No 25
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.5e-33 Score=225.31 Aligned_cols=232 Identities=14% Similarity=0.168 Sum_probs=178.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+...|.+++|+|++ .+|++|+.|+.+++|++........ . .....+..|...|.+++|+|++..|+++ .
T Consensus 105 ~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~~------~---~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~ 174 (354)
T 2pbi_B 105 PCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNENM------A---AKKKSVAMHTNYLSACSFTNSDMQILTASG 174 (354)
T ss_dssp SSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCCS------G---GGCEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred CCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEeccccccc------c---ccceeeeccCCcEEEEEEeCCCCEEEEEeC
Confidence 34578999999985 8999999999999999875431100 0 1122225799999999999999988885 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC--CCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP--NDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
|++|++||+.++ +.+..+.+|... |.++++ +| ++++|++|+.||.|++||+++++++..
T Consensus 175 D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 175 DGTCALWDVESG----------------QLLQSFHGHGAD--VLCLDL-APSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp TSEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCcEEEEeCCCC----------------eEEEEEcCCCCC--eEEEEE-EeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999999999887 688899999876 888887 65 578999999999999999999999999
Q ss_pred EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC--CcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD--NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
+.+|...|.+++|+|++.+|++++.|++|++||++.... ..+.. +...+..+ ...+++.++++++.|+.|++||+.
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV-DFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE-EECTTSSEEEEEETTSCEEEEETT
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE-EEeCCCCEEEEEECCCcEEEEECC
Confidence 999999999999999999999999999999999987642 22211 11222233 235567799999999999999998
Q ss_pred ccccceeE----------eeeccccccCCCCCcCeEEE
Q 023246 236 RRQTLAYR----------ERRYNAADFESDEEEGETYL 263 (285)
Q Consensus 236 ~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~ 263 (285)
+++.+..+ .++|++..+++.+.++.|.+
T Consensus 315 ~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 315 KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp TCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEe
Confidence 76554332 33444444444444444443
No 26
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.2e-34 Score=229.24 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=182.7
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec--CCCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~--~~~~l~s~ 79 (285)
+..+|++++|+|++ .+||+|+.|++|+|||+.+++. .....+.+|...|.+++|++ ++++|+++
T Consensus 12 H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~-------------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 12 HEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQ-------------ILIADLRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp --CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEE-------------EEEEEEECCSSCEEEEEECCGGGSSCEEEE
T ss_pred ccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCc-------------EEEEEEcCCCccEEEEEeCCCCCCCEEEEE
Confidence 35689999999985 8999999999999999987641 11122378999999999986 47888886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC--CcEEEEecCCCeEEEEecCCCce-
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGKL- 155 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~~- 155 (285)
.|++|++||+.++. ......+.+|... |.+++| +|+ +.+|++|+.|+.|++||++.+..
T Consensus 78 s~D~~v~iWd~~~~~--------------~~~~~~~~~h~~~--V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 78 SYDRKVIIWREENGT--------------WEKSHEHAGHDSS--VNSVCW-APHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp ETTSCEEEECCSSSC--------------CCEEEEECCCSSC--CCEEEE-CCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred ECCCEEEEEECCCCc--------------ceEEEEccCCCCc--eEEEEE-CCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 59999999997651 1244567788866 999997 887 78999999999999999987643
Q ss_pred --EEEEecccccceEeEEcCC-----------------CCeEEEEecCCcEEEEcCCCC----CCCCCCCCcccceeecc
Q 023246 156 --VRLMVGDRHVVNQLEPHPH-----------------IPMFATCGIEKTVKLWAPMPT----DFPPLPDNAEKIMKANK 212 (285)
Q Consensus 156 --~~~~~~h~~~v~~~~~~p~-----------------~~~l~t~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~ 212 (285)
...+.+|...|.+++|+|+ +++|++++.|++|++||++.. ....+.+|...+..+.+
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 3445679999999999997 468999999999999999754 23567788888887776
Q ss_pred ccCC---CceEEEeCCCCeEEEEEecccc--------------cceeEeeeccccccCCCCCcCeEEEeecC
Q 023246 213 QGRE---DHSRITLTPDVIMHVLRLQRRQ--------------TLAYRERRYNAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 213 ~~~~---~~~~~~~s~d~~i~vwd~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 267 (285)
.... ..++++++.|+.|++|++.... .+..+.++|++..++....++.|.+++..
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 4432 3689999999999999987621 11223566777778777777888888754
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-32 Score=219.72 Aligned_cols=206 Identities=17% Similarity=0.289 Sum_probs=171.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++|+|++ .+|++|+.|+.|++||+.+++ +...+ .+|...|.+++|+|++++|+++ .|
T Consensus 65 ~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~--------------~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 65 KLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGK--------------CLKTL-KGHSNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------EEEEE-ECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCc--------------EEEEE-cCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 4679999999975 899999999999999999876 22333 6789999999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe-
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV- 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~- 160 (285)
+.|++||+.++ +.+..+..|... |.+++| +|+++++++++.||.|++||+++++.+..+.
T Consensus 129 ~~i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 189 (312)
T 4ery_A 129 ESVRIWDVKTG----------------KCLKTLPAHSDP--VSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 189 (312)
T ss_dssp SCEEEEETTTC----------------CEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CcEEEEECCCC----------------EEEEEecCCCCc--EEEEEE-cCCCCEEEEEeCCCcEEEEECCCCceeeEEec
Confidence 99999999887 677888888866 999997 9999999999999999999999999887764
Q ss_pred cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCccccee--eccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 161 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMK--ANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
.+...+..++|+|++++|++++.|+.|++||++.++. ..+.+|...... ......++.++++++.|+.|++||+.++
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 190 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 4567899999999999999999999999999987753 444445443322 2222345668999999999999999988
Q ss_pred ccceeE
Q 023246 238 QTLAYR 243 (285)
Q Consensus 238 ~~~~~~ 243 (285)
+.+..+
T Consensus 270 ~~~~~~ 275 (312)
T 4ery_A 270 EIVQKL 275 (312)
T ss_dssp CEEEEE
T ss_pred hhhhhh
Confidence 766555
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-32 Score=222.43 Aligned_cols=239 Identities=14% Similarity=0.207 Sum_probs=183.6
Q ss_pred CccceeEEEE-----cCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE
Q 023246 2 NSIRLNAIVI-----DPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 76 (285)
Q Consensus 2 ~~~~v~~~~~-----s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l 76 (285)
+...|++++| ++.++.+|++|+.|++|++||+...+..... . .+...+.+|...|.+++|+|++.++
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~-------~-~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYF-------G-IPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBS-------E-EEEEEECCCSSCEEEEEECSSTTEE
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccccc-------c-cccchhccCCCceEEEEECCCCCEE
Confidence 3568999999 7633589999999999999999865421000 0 1222337899999999999999999
Q ss_pred EEec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCce
Q 023246 77 ISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL 155 (285)
Q Consensus 77 ~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 155 (285)
++++ |++|++||+.++ +.+..+.+|... |.+++| +|+++++++++.|+.|++||+. ++.
T Consensus 92 ~s~s~D~~v~lwd~~~~----------------~~~~~~~~h~~~--v~~v~~-sp~~~~l~s~~~d~~i~~wd~~-~~~ 151 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG----------------TTYKRFVGHQSE--VYSVAF-SPDNRQILSAGAEREIKLWNIL-GEC 151 (343)
T ss_dssp EEEETTSEEEEEETTSS----------------CEEEEEECCCSC--EEEEEE-CSSTTEEEEEETTSCEEEEESS-SCE
T ss_pred EEEcCCCcEEEEECCCC----------------cEEEEEcCCCCc--EEEEEE-CCCCCEEEEEcCCCEEEEEecc-CCc
Confidence 9864 999999999887 678889999977 999997 9999999999999999999998 444
Q ss_pred EEEEe---cccccceEeEEcCCC----------CeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEE
Q 023246 156 VRLMV---GDRHVVNQLEPHPHI----------PMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 156 ~~~~~---~h~~~v~~~~~~p~~----------~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
..... .|...|.+++|+|++ .+|++++.|+.|++||........+.+|...+..+.+ .+++.++++
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~-s~~g~~l~s 230 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSI-SPNGKYIAT 230 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEE-CTTSSEEEE
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEE-CCCCCEEEE
Confidence 44443 688899999999987 6899999999999999655444556677777766655 566779999
Q ss_pred eCCCCeEEEEEecccc-c---------ceeEeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 223 LTPDVIMHVLRLQRRQ-T---------LAYRERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
++.|+.|++||+.... . +..+.+.|+...++.+. ++.+.+++...+.
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQS 287 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCC
T ss_pred EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCC
Confidence 9999999999994322 1 22234555555554433 3457777766543
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-32 Score=223.13 Aligned_cols=227 Identities=15% Similarity=0.166 Sum_probs=170.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .++++|+.|++|++||+.+++ ....+ .+|...|.+++|+|++++|+++ .|
T Consensus 76 ~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~--------------~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 76 NHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGT--------------TYKRF-VGHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp SSCEEEEEECSST-TEEEEEETTSEEEEEETTSSC--------------EEEEE-ECCCSCEEEEEECSSTTEEEEEETT
T ss_pred CCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc--------------EEEEE-cCCCCcEEEEEECCCCCEEEEEcCC
Confidence 4579999999975 899999999999999999876 22333 6899999999999999998885 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEee---cccCceeeeeEEEecCCC----------cEEEEecCCCeEEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---GHRNSQTVKGVNFFGPND----------EYVMSGSDCGHLFIW 148 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~----------~~l~~~~~dg~v~vw 148 (285)
++|++||+... ....+. .|... +.+++| +|++ .++++++.|+.|++|
T Consensus 140 ~~i~~wd~~~~-----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 199 (343)
T 2xzm_R 140 REIKLWNILGE-----------------CKFSSAEKENHSDW--VSCVRY-SPIMKSANKVQPFAPYFASVGWDGRLKVW 199 (343)
T ss_dssp SCEEEEESSSC-----------------EEEECCTTTSCSSC--EEEEEE-CCCCCSCSCCCSSCCEEEEEETTSEEEEE
T ss_pred CEEEEEeccCC-----------------ceeeeecccCCCce--eeeeee-ccccccccccCCCCCEEEEEcCCCEEEEE
Confidence 99999998743 222222 45554 999997 8876 799999999999999
Q ss_pred ecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCC-CCCCCCCCcccceeeccccCCCceEEEeCCCC
Q 023246 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT-DFPPLPDNAEKIMKANKQGREDHSRITLTPDV 227 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~ 227 (285)
|. ..+....+.+|...|.+++|+|++++|++++.|+.|++||+... .......+...+..+.+ .++.. +++++.|+
T Consensus 200 d~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~-sp~~~-~la~~~d~ 276 (343)
T 2xzm_R 200 NT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAF-NPKLQ-WVAVGTDQ 276 (343)
T ss_dssp ET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEE-CSSSC-EEEEEESS
T ss_pred cC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEE-CCCCC-EEEEECCC
Confidence 94 46778888999999999999999999999999999999999443 32222223334545544 34444 45566788
Q ss_pred eEEEEEecccccce-----------------------eEeeeccccccCCCCCcCeEEEeecCC
Q 023246 228 IMHVLRLQRRQTLA-----------------------YRERRYNAADFESDEEEGETYLLGFSD 268 (285)
Q Consensus 228 ~i~vwd~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~v~~~~~~~ 268 (285)
.+++|++.+.+... .+.+.|++..++.+..++.|.+++++.
T Consensus 277 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 277 GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 99999987654332 224455555565555666666665543
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-32 Score=225.40 Aligned_cols=244 Identities=14% Similarity=0.258 Sum_probs=183.5
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCc----ccccccccCCCCCcceEEEEEecCCCEEEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPV----DTFCPRHLIGKNNIHITGLAYSNTSELLIS 78 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s 78 (285)
...|++++|+|++ .+||+|+ ++++++|++.+++....+...... ..+. ......+...|++++|+|++++|++
T Consensus 64 ~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 64 TSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLN-TSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp SSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC------------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccc-ccccCCCceeEEEEEECCCCCEEEE
Confidence 4679999999986 8999876 789999999988754332211100 0000 0001133446999999999999999
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
+ .|++|++||+.++ +.+..+.+|... |.+++| +|++++|++++.|+.|++||++++++..
T Consensus 141 ~~~d~~i~iwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 141 GAEDRLIRIWDIENR----------------KIVMILQGHEQD--IYSLDY-FPSGDKLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EETTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EcCCCeEEEEECCCC----------------cEEEEEccCCCC--EEEEEE-cCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence 6 5999999999887 677888899877 999997 9999999999999999999999998887
Q ss_pred EEecccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCC-------CCCcccceeeccccCCCceEEEeCCCCe
Q 023246 158 LMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPL-------PDNAEKIMKANKQGREDHSRITLTPDVI 228 (285)
Q Consensus 158 ~~~~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~s~d~~ 228 (285)
.+. +...+.+++|+| ++++|++++.|+.|++||++.+.. ..+ .+|...+..+.+ .+++.++++++.|+.
T Consensus 202 ~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 202 TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE-CTTSSEEEEEETTSE
T ss_pred EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE-CCCCCEEEEEeCCCE
Confidence 776 567899999999 899999999999999999987653 222 456666766654 556778999999999
Q ss_pred EEEEEeccccc----------------------ceeEeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 229 MHVLRLQRRQT----------------------LAYRERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 229 i~vwd~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
|++||++.... +..+.+.++...+.+...++.|++++...+.
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 99999875321 1123455566667777778888888876553
No 31
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-32 Score=222.77 Aligned_cols=253 Identities=12% Similarity=0.122 Sum_probs=181.9
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+.+.|++|+|+|+++++||||+.|++|+|||+.+.+.... .+...+.+|...|.+++|+|++++|+++ .
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~----------~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG----------IPQRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE----------EEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc----------eeeEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 3578999999998778999999999999999987652111 1222337899999999999999999986 5
Q ss_pred CCcEEEEEcCCCCCCC--------------------------CCCCCCccccCCC-CceEeecccCceeeeeEEEecCC-
Q 023246 81 DELVYLFEKNMGLGPS--------------------------PLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFFGPN- 132 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~--------------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~- 132 (285)
|+.|++|+........ ...+..++..... ....+.+|... +..++| +++
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~--v~~~~~-~~~~ 183 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW--VSCVRF-SPNS 183 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC--EEEEEE-CSCS
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc--ccceEE-ccCC
Confidence 9999999997654000 0111111111111 11222345544 788886 654
Q ss_pred -CcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeec
Q 023246 133 -DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKAN 211 (285)
Q Consensus 133 -~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 211 (285)
..++++++.|+.|++||+++++.+..+.+|...|++++|+|++++|++++.|+.|++||++..+......+...+....
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 263 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 263 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeee
Confidence 4678899999999999999999999999999999999999999999999999999999998776422222333444433
Q ss_pred cccCCCceEEEeCCCCeEEEEEeccccccee-------------------EeeeccccccCCCCCcCeEEEeecCCC
Q 023246 212 KQGREDHSRITLTPDVIMHVLRLQRRQTLAY-------------------RERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 212 ~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
+ ..+..+++++.|+.|++||++....+.. +.+++++..++.+..++.|++++...|
T Consensus 264 ~--~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 264 F--SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp E--CSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred c--CCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 2 2345677888899999999886543322 345566666666667777777776655
No 32
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-32 Score=237.58 Aligned_cols=201 Identities=15% Similarity=0.251 Sum_probs=166.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d 81 (285)
...|++++|+|++ .+||+|+.|++|+|||+.+++. .....+.+|.++|.+++|+|++++|+++. +
T Consensus 59 ~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~-------------~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~ 124 (611)
T 1nr0_A 59 SHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTH-------------ILKTTIPVFSGPVKDISWDSESKRIAAVGEG 124 (611)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTC-------------CEEEEEECSSSCEEEEEECTTSCEEEEEECC
T ss_pred CCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcc-------------eeeEeecccCCceEEEEECCCCCEEEEEECC
Confidence 4679999999986 8999999999999999976542 11222367899999999999999888853 3
Q ss_pred ----CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCCCceE
Q 023246 82 ----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLV 156 (285)
Q Consensus 82 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~ 156 (285)
+.|++||. + .....+.+|... |.+++| +|++. .|++++.|++|++||..+++++
T Consensus 125 ~~~~~~v~~wd~--~----------------~~~~~l~gh~~~--v~~v~f-~p~~~~~l~s~s~D~~v~lwd~~~~~~~ 183 (611)
T 1nr0_A 125 RERFGHVFLFDT--G----------------TSNGNLTGQARA--MNSVDF-KPSRPFRIISGSDDNTVAIFEGPPFKFK 183 (611)
T ss_dssp SSCSEEEEETTT--C----------------CBCBCCCCCSSC--EEEEEE-CSSSSCEEEEEETTSCEEEEETTTBEEE
T ss_pred CCceeEEEEeeC--C----------------CCcceecCCCCC--ceEEEE-CCCCCeEEEEEeCCCeEEEEECCCCeEe
Confidence 46888874 3 355677888876 999998 99886 6999999999999999999999
Q ss_pred EEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCC-------CCCcccceeeccccCCCceEEEeCCCCe
Q 023246 157 RLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL-------PDNAEKIMKANKQGREDHSRITLTPDVI 228 (285)
Q Consensus 157 ~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~s~d~~ 228 (285)
..+.+|...|.+++|+|++++|++++.|++|++||+..+.. ..+ .+|...+..+.+ .+++.++++++.|++
T Consensus 184 ~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~-spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW-SPDGTKIASASADKT 262 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE-CTTSSEEEEEETTSE
T ss_pred eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE-CCCCCEEEEEeCCCe
Confidence 99999999999999999999999999999999999876653 222 157777777765 556778999999999
Q ss_pred EEEEEeccccc
Q 023246 229 MHVLRLQRRQT 239 (285)
Q Consensus 229 i~vwd~~~~~~ 239 (285)
|++||+.+++.
T Consensus 263 v~lWd~~~~~~ 273 (611)
T 1nr0_A 263 IKIWNVATLKV 273 (611)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEeCCCCce
Confidence 99999986543
No 33
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.6e-32 Score=221.98 Aligned_cols=208 Identities=15% Similarity=0.150 Sum_probs=168.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCccccccccc-CCCCCcceEEEEEec-CCCEEEEe-
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN-TSELLISY- 79 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~s~-~~~~l~s~- 79 (285)
...|++++|+|++..+|++|+.||.|+|||+.+++. ...+ ..+|...|.+++|+| ++++|+++
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--------------TSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--------------EEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--------------ceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 468999999998658999999999999999997762 1111 147999999999999 66888885
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC-ceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
.|+.|++||+... ....+..+.. ...|.+++| +|+++++++++.|+.|++||+ +++.+..
T Consensus 139 ~d~~i~iwd~~~~-----------------~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~i~d~-~~~~~~~ 199 (383)
T 3ei3_B 139 IRGATTLRDFSGS-----------------VIQVFAKTDSWDYWYCCVDV-SVSRQMLATGDSTGRLLLLGL-DGHEIFK 199 (383)
T ss_dssp TTTEEEEEETTSC-----------------EEEEEECCCCSSCCEEEEEE-ETTTTEEEEEETTSEEEEEET-TSCEEEE
T ss_pred CCCEEEEEECCCC-----------------ceEEEeccCCCCCCeEEEEE-CCCCCEEEEECCCCCEEEEEC-CCCEEEE
Confidence 5999999999854 4555554431 123999997 999999999999999999999 4888999
Q ss_pred EecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCC----CCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEE
Q 023246 159 MVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPT----DFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
+..|...|.+++|+|+++ +|++++.|+.|++||++.. .+.....|...+..+.+...++.++++++.|+.|++||
T Consensus 200 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 200 EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYS 279 (383)
T ss_dssp EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEE
T ss_pred eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEE
Confidence 999999999999999999 8999999999999999763 33222356677777766443677899999999999999
Q ss_pred ecccccceeE
Q 023246 234 LQRRQTLAYR 243 (285)
Q Consensus 234 ~~~~~~~~~~ 243 (285)
+++.+.+..+
T Consensus 280 ~~~~~~~~~~ 289 (383)
T 3ei3_B 280 SYDWSKPDQI 289 (383)
T ss_dssp TTBTTSCSEE
T ss_pred CCCCcccccc
Confidence 9887665544
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4e-32 Score=236.20 Aligned_cols=197 Identities=16% Similarity=0.262 Sum_probs=153.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|+++.+|++|+.|++|++||..+++ +...+ .+|...|++++|+|++++|+++ .|
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--------------~~~~l-~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--------------FKSTF-GEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--------------Eeeee-ccccCceEEEEECCCCCEEEEEECC
Confidence 46799999999875679999999999999987664 22333 7899999999999999999996 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEee-------cccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-------GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
++|++||+.++ +....+. +|... |.+++| +|++++|++++.|++|++||+++++
T Consensus 212 ~~i~lwd~~~g----------------~~~~~~~~~~~~~~~h~~~--V~~v~~-spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 212 GTIVLYNGVDG----------------TKTGVFEDDSLKNVAHSGS--VFGLTW-SPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp SCEEEEETTTC----------------CEEEECBCTTSSSCSSSSC--EEEEEE-CTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CcEEEEECCCC----------------cEeeeeccccccccccCCC--EEEEEE-CCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 99999999876 4555553 67766 999997 9999999999999999999998876
Q ss_pred eEE-------------------------------------------EEecccccceEeEEcCCCCeEEEEecCCcEEEEc
Q 023246 155 LVR-------------------------------------------LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWA 191 (285)
Q Consensus 155 ~~~-------------------------------------------~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd 191 (285)
++. .+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 543 3347889999999999999999999999999999
Q ss_pred CCCCCCCC-C-CCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 192 PMPTDFPP-L-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 192 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
+.++.... + ..|...+..+.+. .+..+++++.|+.+++|++.
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s--~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTT--SKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEEC--TTSCEEEEETTTEEEEECSS
T ss_pred CCCCceeeecccCCcceEEEEEEC--CCCcEEEEEcCCceEEeecC
Confidence 98765322 1 2344444433322 22345555555555555543
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-33 Score=229.55 Aligned_cols=232 Identities=12% Similarity=0.126 Sum_probs=172.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++|+.|+.|+|||+.++... ....+ .+|...|.+++|+|++++|+++ .|
T Consensus 11 ~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~------------~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 11 PKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWK------------HARTF-SDHDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp SSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEE------------ECCCB-CCCSSCEEEEEECTTTCCEEEEETT
T ss_pred CCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceE------------EEEEE-ecCCceEEEEEEeCCCCEEEEEeCC
Confidence 5689999999975 89999999999999999976210 22222 6899999999999999999886 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc---eEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK---LVRL 158 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~ 158 (285)
++|++||+..+. .......+..|... |.+++| +|++++|++++.|+.|++||+++++ ....
T Consensus 77 ~~v~vwd~~~~~-------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 77 RNAYVYEKRPDG-------------TWKQTLVLLRLNRA--ATFVRW-SPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp SSEEEC-------------------CCCCEEECCCCSSC--EEEEEC-CTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred CeEEEEEcCCCC-------------ceeeeeEecccCCc--eEEEEE-CCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 999999998761 01245666778766 999997 9999999999999999999999877 4677
Q ss_pred Eec-ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-------------------CCCCCCCcccceeeccccCCCc
Q 023246 159 MVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-------------------FPPLPDNAEKIMKANKQGREDH 218 (285)
Q Consensus 159 ~~~-h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 218 (285)
+.. |...|.+++|+|++++|++++.|+.|++||++... +..+ .|...+..+.+ .+++.
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~-sp~~~ 218 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF-SPSGN 218 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE-CTTSS
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE-CCCCC
Confidence 777 99999999999999999999999999999985322 1223 56666666654 55677
Q ss_pred eEEEeCCCCeEEEEEeccccc----cee----------EeeeccccccCCCCCcCeEEEeecC
Q 023246 219 SRITLTPDVIMHVLRLQRRQT----LAY----------RERRYNAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~ 267 (285)
++++++.|+.|++||+.+.+. +.. +.+.+++..++...+++ +.++...
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGN 280 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeC
Confidence 899999999999999998765 222 23455555555555443 3344443
No 36
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.5e-32 Score=221.90 Aligned_cols=208 Identities=13% Similarity=0.205 Sum_probs=169.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEe-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~-~ 80 (285)
.+.|.++.|+|+++.+|++|+.|++|++||+.+++....+ ......+|...|.+++|++ ++.+|+++ .
T Consensus 157 ~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~----------~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 157 KGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF----------GSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp SSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE----------CCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred CcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe----------ecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 4568889999976678999999999999999988643211 1112257899999999987 77888886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|++|++||++... +.+..+.+|... |.+++| +|++++|++|+.||+|++||+++++.+..+.
T Consensus 227 D~~v~~wd~~~~~---------------~~~~~~~~h~~~--v~~v~~-~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 227 DTTVRLWDLRITS---------------RAVRTYHGHEGD--INSVKF-FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp TSCEEEEETTTTC---------------CCCEEECCCSSC--CCEEEE-CTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred CCeEEEEECCCCC---------------cceEEECCcCCC--eEEEEE-ecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999999997431 567888899877 999997 9999999999999999999999999988876
Q ss_pred ccc-------ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCC----CCCcccceeeccccCCCceEEEeCCCCe
Q 023246 161 GDR-------HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL----PDNAEKIMKANKQGREDHSRITLTPDVI 228 (285)
Q Consensus 161 ~h~-------~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~s~d~~ 228 (285)
.+. ..|.+++|+|++++|++|+.||.|++||+..++. ..+ .+|...+.++.+ .+++.++++++.|+.
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~-s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGL-SSDGSALCTGSWDKN 367 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEE-CSSSSEEEEECTTSC
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEE-CCCCCEEEEeeCCCC
Confidence 543 2489999999999999999999999999876652 222 457777766654 567779999999999
Q ss_pred EEEEEeccccc
Q 023246 229 MHVLRLQRRQT 239 (285)
Q Consensus 229 i~vwd~~~~~~ 239 (285)
|++|++...+.
T Consensus 368 i~iW~~~~~~~ 378 (380)
T 3iz6_a 368 LKIWAFSGHRK 378 (380)
T ss_dssp EEEEECCSSSS
T ss_pred EEEEecCCCcc
Confidence 99999887643
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.7e-32 Score=237.76 Aligned_cols=237 Identities=15% Similarity=0.190 Sum_probs=186.8
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
+...|++++|+|++..+|++|+.|++|++|++.+..... . .....+.+|...|.+++|+|++++|++++
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---------~-~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~ 450 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---------G-VAQRRLTGHSHFVEDVVLSSDGQFALSGSW 450 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---------C-EEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---------c-cccceecCCCCcEEEEEECCCCCEEEEEeC
Confidence 467899999999877899999999999999998653110 0 11122378999999999999999999965
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEE-
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM- 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~- 159 (285)
|++|++||+.++ .....+.+|... |.+++| +|++++|++++.|++|++||+.........
T Consensus 451 Dg~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 451 DGELRLWDLAAG----------------VSTRRFVGHTKD--VLSVAF-SLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp TSEEEEEETTTT----------------EEEEEEECCSSC--EEEEEE-CTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred CCcEEEEECCCC----------------cceeEEeCCCCC--EEEEEE-eCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 999999999887 677889999977 999997 999999999999999999998744333222
Q ss_pred --ecccccceEeEEcCCC--CeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 160 --VGDRHVVNQLEPHPHI--PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 160 --~~h~~~v~~~~~~p~~--~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
.+|...|.+++|+|++ ..+++++.|++|++||++..++ ..+.+|...+..+.+ .+++.++++++.|+.|++||+
T Consensus 512 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~-spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 512 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV-SPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSBCEEEET
T ss_pred CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE-eCCCCEEEEEeCCCeEEEEEC
Confidence 3688899999999987 5799999999999999987764 557778877766655 556779999999999999999
Q ss_pred cccccceeE---------eeeccccccCCCCCcCeEEEeecCCC
Q 023246 235 QRRQTLAYR---------ERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 235 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
++++.+..+ .++++...+.... ++.+.++++..+
T Consensus 591 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 591 AEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp TTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTT
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCC
Confidence 887654332 3445544444333 334777776654
No 38
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-31 Score=210.11 Aligned_cols=204 Identities=12% Similarity=0.158 Sum_probs=161.3
Q ss_pred ccceeEEEEcCC-CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEEe
Q 023246 3 SIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLISY 79 (285)
Q Consensus 3 ~~~v~~~~~s~~-~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s~ 79 (285)
..+|++++|+|+ .+.+|++|+.|++|+|||+.+++.. .. ....+|...|.+++|+|+ +.+|+++
T Consensus 53 ~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~------------~~-~~~~~h~~~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 53 EGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS------------QI-AVHAVHSASVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC------------CC-EEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE------------EE-EEeecCCCceeEEEeCcCCCCcEEEEE
Confidence 568999999874 2489999999999999999876421 11 122678999999999997 7888885
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-------------CcEEEEecCCCeE
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-------------DEYVMSGSDCGHL 145 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~~l~~~~~dg~v 145 (285)
.|++|++||+.... ......+.+|... |.+++| +|+ +++|++|+.|+.|
T Consensus 120 s~d~~v~~wd~~~~~--------------~~~~~~~~~h~~~--v~~~~~-~p~~~~~~~~~~~~~~~~~l~sgs~D~~v 182 (297)
T 2pm7_B 120 SSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW-APATIEEDGEHNGTKESRKFVTGGADNLV 182 (297)
T ss_dssp ETTSEEEEEEBCSSS--------------CBCCEEEECCSSC--EEEEEE-CCCC------------CCEEEEEETTSCE
T ss_pred ECCCcEEEEEecCCC--------------ceeeeeeecccCc--cceEee-cCCcccccccCCCCCCcceEEEEcCCCcE
Confidence 59999999997651 0124567788866 999997 886 5799999999999
Q ss_pred EEEecCCCc----eEEEEecccccceEeEEcCCC---CeEEEEecCCcEEEEcCCCCC------CCCCCCCcccceeecc
Q 023246 146 FIWKKKGGK----LVRLMVGDRHVVNQLEPHPHI---PMFATCGIEKTVKLWAPMPTD------FPPLPDNAEKIMKANK 212 (285)
Q Consensus 146 ~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~---~~l~t~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~~ 212 (285)
++||+++++ ....+.+|...|.+++|+|++ .+|++++.|++|++||++... ......+...+..+.+
T Consensus 183 ~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 262 (297)
T 2pm7_B 183 KIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW 262 (297)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEE
T ss_pred EEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEE
Confidence 999998766 567888999999999999985 789999999999999987642 1111345555655554
Q ss_pred ccCCCceEEEeCCCCeEEEEEeccc
Q 023246 213 QGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 213 ~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
.+++.++++++.|+.|++|+....
T Consensus 263 -s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 263 -SLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp -CSSSCCEEEEETTSCEEEEEECTT
T ss_pred -CCCCCEEEEEcCCCcEEEEEECCC
Confidence 556778999999999999997643
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-31 Score=217.14 Aligned_cols=233 Identities=14% Similarity=0.156 Sum_probs=186.8
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s~ 79 (285)
+..+|++++|+|++ .+|++|+.||.|+|||+..... .....+.+|...|++++|+++ +++|+++
T Consensus 10 h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 10 HNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-------------KLIDTLTGHEGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp CCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred CcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc-------------eeeeEecCCCCcEEEEEeCCCCCCCEEEEe
Confidence 46789999999985 8999999999999999984321 122223789999999999977 8888886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCC--CceEeecccCceeeeeEEEecCC--CcEEEEecCCCeEEEEecCCCc
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
.|+.|++||+..+ + ....+..|... |.+++| +|+ ++++++++.|+.|++||++++.
T Consensus 76 ~~dg~v~iwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 76 SYDGKVLIWKEENG----------------RWSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp ETTSCEEEEEEETT----------------EEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred ccCCEEEEEEcCCC----------------ceeEeeeecCCCcc--eEEEEe-CCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 5999999999876 3 55666777766 999997 998 9999999999999999998773
Q ss_pred --eEEEEecccccceEeEEcC-------------CCCeEEEEecCCcEEEEcCCCCCC-----CCCCCCcccceeecccc
Q 023246 155 --LVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTDF-----PPLPDNAEKIMKANKQG 214 (285)
Q Consensus 155 --~~~~~~~h~~~v~~~~~~p-------------~~~~l~t~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~ 214 (285)
....+..|...|.+++|+| ++.+|++++.|+.|++||++.... ..+.+|...+..+.+..
T Consensus 137 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 137 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC
Confidence 4556778999999999999 689999999999999999976542 35666777777776643
Q ss_pred CC--CceEEEeCCCCeEEEEEeccccc---------------ceeEeeeccccccCCCCCcCeEEEeecC
Q 023246 215 RE--DHSRITLTPDVIMHVLRLQRRQT---------------LAYRERRYNAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 215 ~~--~~~~~~~s~d~~i~vwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 267 (285)
.. ..++++++.|+.|++||++.... +..+.+.+++..+.....++.++++++.
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 32 78999999999999999987521 1223566677777777677788888766
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.5e-31 Score=212.27 Aligned_cols=238 Identities=14% Similarity=0.113 Sum_probs=186.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++++ ||.|++||+.+++.... + . ......|...|.+++|+|++++|+++ .|
T Consensus 51 ~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~------~---~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 118 (337)
T 1gxr_A 51 GEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSP------V---S-QLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp SSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSC------S---E-EEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred CCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceee------e---e-cccccCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 5689999999975 8999998 99999999987652211 0 0 01113688999999999999988885 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||+..+. ......+..|... +.+++| +|+++++++++.||.|++||+++++.+..+..
T Consensus 119 ~~i~~~d~~~~~--------------~~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 119 STLSIWDLAAPT--------------PRIKAELTSSAPA--CYALAI-SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp SEEEEEECCCC----------------EEEEEEECSSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CcEEEEECCCCC--------------cceeeecccCCCc--eEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 999999998761 0145566777765 999997 99999999999999999999999999999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccce
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA 241 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~ 241 (285)
|...|.+++|+|++++|++++.|+.|++||++.++......+...+..+.+ .+++.++++++.++.|++||+...+...
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY-CPTGEWLAVGMESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE-CTTSSEEEEEETTSCEEEEETTSSCEEE
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEE-CCCCCEEEEEcCCCcEEEEECCCCCeEE
Confidence 999999999999999999999999999999987764332234445544443 4566788999999999999998764332
Q ss_pred ---------eEeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 242 ---------YRERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 242 ---------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
.+.+.+++..+.....++.+.+++...+.
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 23455666667766777788888876654
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-31 Score=222.87 Aligned_cols=205 Identities=11% Similarity=0.132 Sum_probs=163.8
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+...|++++|+|++ .+|++|+.|++|++||+.+++ ....+ .+|...|.+++|+|++++|+++ .
T Consensus 138 h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~ 201 (420)
T 3vl1_A 138 HVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS--------------NPRTL-IGHRATVTDIAIIDRGRNVLSASL 201 (420)
T ss_dssp SSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------CCEEE-ECCSSCEEEEEEETTTTEEEEEET
T ss_pred ccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc--------------CceEE-cCCCCcEEEEEEcCCCCEEEEEcC
Confidence 35689999999975 899999999999999999876 23333 6899999999999999998886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeeccc---Cc-------------------eeeeeEEEecCCCcEEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR---NS-------------------QTVKGVNFFGPNDEYVMS 138 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~i~~~~~~~~~~~~l~~ 138 (285)
|+.|++||+.++ +.+..+..+. .. ..+.+++| +|+++++++
T Consensus 202 d~~v~iwd~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~ 264 (420)
T 3vl1_A 202 DGTIRLWECGTG----------------TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF-GTYGKYVIA 264 (420)
T ss_dssp TSCEEEEETTTT----------------EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS-SCTTEEEEE
T ss_pred CCcEEEeECCCC----------------ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE-cCCCCEEEE
Confidence 999999999877 4555554322 11 12555665 899999999
Q ss_pred ecCCCeEEEEecCCCceEEEEe-cccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCC--CCCCCCCcccceeecccc
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD--FPPLPDNAEKIMKANKQG 214 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~ 214 (285)
++.||.|++||+++++.+..+. .|...|.+++|+|+++ +|++++.||.|++||++.+. +..+..+....+...+ .
T Consensus 265 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~ 343 (420)
T 3vl1_A 265 GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-F 343 (420)
T ss_dssp EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-E
T ss_pred EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-e
Confidence 9999999999999998877775 5788999999999999 89999999999999998764 3445543444444333 3
Q ss_pred CCCceEEEeCCCCeEEEEEecccccc
Q 023246 215 REDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 215 ~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
.++.++++++.|+.|++|++......
T Consensus 344 ~~~~~l~s~~~d~~v~iw~~~~~~~~ 369 (420)
T 3vl1_A 344 AAGALFVSSGFDTSIKLDIISDPESE 369 (420)
T ss_dssp ETTEEEEEETTTEEEEEEEECCTTCC
T ss_pred CCCCEEEEecCCccEEEEeccCCCCC
Confidence 45678999999999999999875433
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.1e-31 Score=217.13 Aligned_cols=237 Identities=12% Similarity=0.158 Sum_probs=184.9
Q ss_pred CccceeEEEEcCC---CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC----CC
Q 023246 2 NSIRLNAIVIDPR---NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SE 74 (285)
Q Consensus 2 ~~~~v~~~~~s~~---~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~----~~ 74 (285)
+..+|++++|+|+ +..++++++.++.|++||+.+++.... +. ......|...|++++|+|+ +.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~---------~~-~~~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRL---------LQ-SYVDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEE---------EE-EEECSCTTCCEEEEEEEECTTTCCE
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEe---------ee-eccccCCCCcEEEEEeccCCCCCCC
Confidence 3578999999984 446777777788999999997753211 11 1111347789999999999 56
Q ss_pred EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCC
Q 023246 75 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKG 152 (285)
Q Consensus 75 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~ 152 (285)
+|+++ .|+.|++||+.++ +.+..+.+|... |.+++| +| +++++++++.||.|++||+++
T Consensus 87 ~l~~~~~dg~i~v~d~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITM----------------QCIKHYVGHGNA--INELKF-HPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp EEEEEETTCEEEEECTTTC----------------CEEEEEESCCSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEEEecCCCEEEEEEchhc----------------eEeeeecCCCCc--EEEEEE-CCCCCCEEEEEeCCCeEEEEEeec
Confidence 78885 5999999999887 678888888876 999997 88 899999999999999999999
Q ss_pred CceEEEE---ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CC----------------------------C
Q 023246 153 GKLVRLM---VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PP----------------------------L 200 (285)
Q Consensus 153 ~~~~~~~---~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~----------------------------~ 200 (285)
++.+..+ ..|...|.+++|+|++++|++++.|+.|++||++.+.. .. .
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9999888 68999999999999999999999999999999976531 11 1
Q ss_pred CCCcccceeeccccCCCceEEEeCCCCeEEEEEeccccc--------------cee----------Eeeecc--ccccCC
Q 023246 201 PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT--------------LAY----------RERRYN--AADFES 254 (285)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~--------------~~~----------~~~~~~--~~~~~~ 254 (285)
..|...+..+.+. +.++++++.|+.|++||+..... +.. +.+.++ +..++.
T Consensus 228 ~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 228 DIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp SSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred cCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 1255556555553 45899999999999999987643 111 233444 666776
Q ss_pred CCCcCeEEEeecCCCC
Q 023246 255 DEEEGETYLLGFSDSD 270 (285)
Q Consensus 255 ~~~~~~v~~~~~~~~~ 270 (285)
...++.|++++...++
T Consensus 305 ~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 305 GNQVGKLYVWDLEVED 320 (366)
T ss_dssp ECTTSCEEEEECCSSS
T ss_pred EecCCcEEEEECCCCC
Confidence 7777888888887654
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-31 Score=234.30 Aligned_cols=225 Identities=17% Similarity=0.224 Sum_probs=174.5
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .+|++|+.||+|+|||+.+++ ....+ .+|...|.+++|+|++++|+++ .|
T Consensus 430 ~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~--------------~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 430 SHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV--------------STRRF-VGHTKDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc--------------ceeEE-eCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 4679999999985 899999999999999999876 23333 6899999999999999998886 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEe----ecccCceeeeeEEEecCCC--cEEEEecCCCeEEEEecCCCce
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY----SGHRNSQTVKGVNFFGPND--EYVMSGSDCGHLFIWKKKGGKL 155 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~ 155 (285)
++|++||.... ....+ .+|... |.+++| +|++ ..+++++.|+.|++||++++++
T Consensus 494 ~~i~iwd~~~~-----------------~~~~~~~~~~~h~~~--v~~~~~-~~~~~~~~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 494 RTIKLWNTLGE-----------------CKYTISEGGEGHRDW--VSCVRF-SPNTLQPTIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp SCEEEECTTSC-----------------EEEEECSSTTSCSSC--EEEEEE-CSCSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEECCCC-----------------cceeeccCCCCCCCc--EEEEEE-eCCCCcceEEEEeCCCeEEEEECCCCcE
Confidence 99999998643 22222 346655 999997 8876 6899999999999999999999
Q ss_pred EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 156 VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
...+.+|.+.|.+++|+|++++|++++.|++|++||++.++. ..+. +...+..+.+ .++. .+++++.++.|++||+
T Consensus 554 ~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~-sp~~-~~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 554 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCF-SPNR-YWLCAATEHGIKIWDL 630 (694)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEE-CSSS-SEEEEEETTEEEEEET
T ss_pred EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEE-cCCC-cEEEEEcCCCEEEEEC
Confidence 999999999999999999999999999999999999987763 3332 3334444433 3344 4555566778999999
Q ss_pred ccccccee-----------------------------EeeeccccccCCCCCcCeEEEeec
Q 023246 235 QRRQTLAY-----------------------------RERRYNAADFESDEEEGETYLLGF 266 (285)
Q Consensus 235 ~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~v~~~~~ 266 (285)
++...+.. +.+++++..+.++..+|.|.+++.
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 631 ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 87654432 234555566666666666666654
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-30 Score=216.75 Aligned_cols=227 Identities=16% Similarity=0.115 Sum_probs=180.7
Q ss_pred EEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcEEE
Q 023246 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYL 86 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~i 86 (285)
...|+|++ .+|++|+.||.|++||+.+++ .. ..+.+|...|++++|+|++++|+++ .|+.|++
T Consensus 102 ~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~--------------~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 102 VDTAKLQM-RRFILGTTEGDIKVLDSNFNL--------------QR-EIDQAHVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp EEEECSSS-CEEEEEETTSCEEEECTTSCE--------------EE-EETTSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEEecCC-CEEEEEECCCCEEEEeCCCcc--------------ee-eecccccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 34678875 899999999999999998775 22 2336899999999999999999886 5999999
Q ss_pred EEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecc----
Q 023246 87 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD---- 162 (285)
Q Consensus 87 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h---- 162 (285)
||+.++ +.+..+.+|... |.+++| +|++++|++++.|+.|++||+++++.+..+..|
T Consensus 166 wd~~~~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 226 (420)
T 3vl1_A 166 WSVKDG----------------SNPRTLIGHRAT--VTDIAI-IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPH 226 (420)
T ss_dssp EETTTC----------------CCCEEEECCSSC--EEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTT
T ss_pred EeCCCC----------------cCceEEcCCCCc--EEEEEE-cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCC
Confidence 999887 678889999877 999997 999999999999999999999999999888753
Q ss_pred --------------------cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCC-CCCcccceeeccccCCCceE
Q 023246 163 --------------------RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL-PDNAEKIMKANKQGREDHSR 220 (285)
Q Consensus 163 --------------------~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~ 220 (285)
...+.+++|+|++++|++++.||.|++||++.+.. ..+ ..|...+..+.+......++
T Consensus 227 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEE
T ss_pred CCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEE
Confidence 35566677889999999999999999999987763 333 34566666666543333389
Q ss_pred EEeCCCCeEEEEEeccccc-ceeEe----------eeccccccCCCCCcCeEEEeecCCC
Q 023246 221 ITLTPDVIMHVLRLQRRQT-LAYRE----------RRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
++++.||.|++||+++.+. +..+. ..++...+.....++.+.++++.+.
T Consensus 307 ~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 307 YAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred EEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 9999999999999988644 33322 2223445666667778888887764
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-30 Score=208.31 Aligned_cols=206 Identities=12% Similarity=0.098 Sum_probs=175.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++|+|++ .+|++++.|+.|++||+.+++. ........|...|.+++|+|++++|+++ .|
T Consensus 97 ~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 97 DNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP-------------RIKAELTSSAPACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp TSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC---------------EEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc-------------ceeeecccCCCceEEEEECCCCCEEEEEeCC
Confidence 4679999999975 8999999999999999987652 1222236788899999999999988886 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||+.++ +....+..|... +.+++| +|+++++++++.||.|++||+++++.+..+.
T Consensus 163 g~v~~~d~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~- 222 (337)
T 1gxr_A 163 GNIAVWDLHNQ----------------TLVRQFQGHTDG--ASCIDI-SNDGTKLWTGGLDNTVRSWDLREGRQLQQHD- 222 (337)
T ss_dssp SCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred CcEEEEeCCCC----------------ceeeeeecccCc--eEEEEE-CCCCCEEEEEecCCcEEEEECCCCceEeeec-
Confidence 99999999887 677888888866 999997 9999999999999999999999998887765
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccce
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLA 241 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~ 241 (285)
|...+.+++|+|+++++++++.|+.|++||++......+..|...+..+.+ .+++.++++++.|+.|++||+..++.+.
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKF-AYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEE-CCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 678899999999999999999999999999988876667777777766655 4566789999999999999998876664
Q ss_pred eE
Q 023246 242 YR 243 (285)
Q Consensus 242 ~~ 243 (285)
..
T Consensus 302 ~~ 303 (337)
T 1gxr_A 302 QS 303 (337)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.6e-31 Score=228.62 Aligned_cols=192 Identities=21% Similarity=0.370 Sum_probs=167.6
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++|+|++ .+|++++.|+.|++||.. ++ ....+ .+|...|++++|+|++++|+++ .|
T Consensus 385 ~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~--------------~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 385 SSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--------------LLQTL-TGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp SSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CC--------------EEEEE-ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CC--------------EEEEe-cCCCCCeEEEEECCCCCEEEEEcCC
Confidence 5679999999986 899999999999999964 33 22222 6799999999999999999985 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
++|++||... +.+..+.+|... |.+++| +|++++|++++.|+.|++||. +++++..+.+
T Consensus 448 ~~v~~w~~~~-----------------~~~~~~~~~~~~--v~~~~~-spd~~~las~~~d~~i~iw~~-~~~~~~~~~~ 506 (577)
T 2ymu_A 448 KTVKLWNRNG-----------------QLLQTLTGHSSS--VRGVAF-SPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 506 (577)
T ss_dssp SEEEEEETTS-----------------CEEEEEECCSSC--EEEEEE-CTTSCEEEEEETTSEEEEEET-TSCEEEEEEC
T ss_pred CEEEEEECCC-----------------CEEEEEcCCCCC--EEEEEE-cCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC
Confidence 9999999754 477888889877 999997 999999999999999999996 5889999999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEE
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
|...|++++|+|++++|++++.|+.|++||.....+..+.+|...+..+.+ .++++++++++.|++|++||
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~f-s~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAF-SPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEE-CTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEE-cCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999999999876666778888888877765 56778899999999999997
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=1.9e-30 Score=214.78 Aligned_cols=210 Identities=13% Similarity=0.151 Sum_probs=166.7
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEEEe-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY- 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~s~- 79 (285)
+..+|++++|+|+++.+|++|+.||+|+|||+.++...... .. ... .+.+|...|.+++|+|++ .+|+++
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~--~~-----~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL--RE-----PVI-TLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB--CS-----CSE-EEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc--CC-----ceE-EecCCCCeEEEEEECcCCCCEEEEEc
Confidence 35689999999944589999999999999999987532110 01 122 226899999999999998 588885
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe--ecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY--SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
.|+.|++||+.++ +.+..+ ..|... |.+++| +|++++|++++.||.|++||+++++.+.
T Consensus 152 ~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 212 (402)
T 2aq5_A 152 CDNVILVWDVGTG----------------AAVLTLGPDVHPDT--IYSVDW-SRDGALICTSCRDKRVRVIEPRKGTVVA 212 (402)
T ss_dssp TTSCEEEEETTTT----------------EEEEEECTTTCCSC--EEEEEE-CTTSSCEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCC----------------CccEEEecCCCCCc--eEEEEE-CCCCCEEEEEecCCcEEEEeCCCCceee
Confidence 5999999999887 677777 677766 999997 9999999999999999999999999999
Q ss_pred EE-eccccc-ceEeEEcCCCCeEEEE---ecCCcEEEEcCCCCCC-C-C-CCCCcccceeeccccCCCceE-EEeCCCCe
Q 023246 158 LM-VGDRHV-VNQLEPHPHIPMFATC---GIEKTVKLWAPMPTDF-P-P-LPDNAEKIMKANKQGREDHSR-ITLTPDVI 228 (285)
Q Consensus 158 ~~-~~h~~~-v~~~~~~p~~~~l~t~---~~d~~i~iwd~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~-~~~s~d~~ 228 (285)
.+ ..|.+. +.+++|+|++++|+++ +.|+.|++||++.... . . ...+...+..+.+ .+++.++ ++++.|+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 213 EKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF-DPDTNIVYLCGKGDSS 291 (402)
T ss_dssp EEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE-ETTTTEEEEEETTCSC
T ss_pred eeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE-cCCCCEEEEEEcCCCe
Confidence 88 688766 8999999999999999 7899999999987543 1 1 1134455555544 3344444 67788999
Q ss_pred EEEEEeccccc
Q 023246 229 MHVLRLQRRQT 239 (285)
Q Consensus 229 i~vwd~~~~~~ 239 (285)
|++||+...+.
T Consensus 292 i~i~d~~~~~~ 302 (402)
T 2aq5_A 292 IRYFEITSEAP 302 (402)
T ss_dssp EEEEEECSSTT
T ss_pred EEEEEecCCCc
Confidence 99999998763
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=6.7e-31 Score=214.62 Aligned_cols=196 Identities=9% Similarity=0.067 Sum_probs=159.0
Q ss_pred ceeEEEEcCCCCcEEE--EeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCC
Q 023246 5 RLNAIVIDPRNPNYFA--VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~--tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
.+.+++||||+ .+++ +++.|++|+|||+.+++. ...+ .|...|.+++|+|+|++|++++++
T Consensus 135 ~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~--------------~~~~--~~~~~V~~v~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 135 YTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTE--------------KFEI--ETRGEVKDLHFSTDGKVVAYITGS 197 (365)
T ss_dssp CEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEE--------------EEEE--ECSSCCCEEEECTTSSEEEEECSS
T ss_pred CEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcE--------------EEEe--CCCCceEEEEEccCCceEEeccce
Confidence 47789999986 6655 455799999999998862 2222 367789999999999999999888
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceE--eecccCceeeeeEEEecCCCcEEEEecCCC----eEEEEecCCCce-
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQV--YSGHRNSQTVKGVNFFGPNDEYVMSGSDCG----HLFIWKKKGGKL- 155 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg----~v~vwd~~~~~~- 155 (285)
.+++|+..++ +.... ...|.. .+.+++| +|+++++++++.|+ .+++|++.....
T Consensus 198 ~~~~~~~~~~----------------~~~~~~~~~~~~~--~v~~v~f-spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 198 SLEVISTVTG----------------SCIARKTDFDKNW--SLSKINF-IADDTVLIAASLKKGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CEEEEETTTC----------------CEEEEECCCCTTE--EEEEEEE-EETTEEEEEEEESSSCCEEEEEEEEETTEEE
T ss_pred eEEEEEeccC----------------cceeeeecCCCCC--CEEEEEE-cCCCCEEEEEecCCcceeEEeecccccceec
Confidence 8899988766 33322 334554 4999997 99999999998877 688999876653
Q ss_pred ---EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CC-CCCCcccceeeccccCCCceEEEeCCCCeEE
Q 023246 156 ---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PP-LPDNAEKIMKANKQGREDHSRITLTPDVIMH 230 (285)
Q Consensus 156 ---~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 230 (285)
...+.+|...|++++|+|++++||+|+.|++|+|||+++++. .. +.+|...+..+.+ ++++++++++|.|++|+
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f-Spdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI-SPDSTYVASVSAANTIH 337 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE-CTTSCEEEEEETTSEEE
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE-CCCCCEEEEEeCCCeEE
Confidence 356678999999999999999999999999999999988764 44 4678888877765 67788999999999999
Q ss_pred EEEeccc
Q 023246 231 VLRLQRR 237 (285)
Q Consensus 231 vwd~~~~ 237 (285)
||++...
T Consensus 338 vw~ip~~ 344 (365)
T 4h5i_A 338 IIKLPLN 344 (365)
T ss_dssp EEECCTT
T ss_pred EEEcCCC
Confidence 9999654
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.3e-31 Score=219.41 Aligned_cols=239 Identities=7% Similarity=0.129 Sum_probs=178.6
Q ss_pred ccceeEEEEcC-CCCcEEEEeeCCCcEEEEEccC---CcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE
Q 023246 3 SIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRK---CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 78 (285)
Q Consensus 3 ~~~v~~~~~s~-~~~~~l~tg~~dg~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s 78 (285)
..+|++++|+| ++ .+|++|+.||+|+|||+.+ +... .. ....+|...|++++|+|++++|++
T Consensus 63 ~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~------------~~-~~~~~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 63 PNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVY------------SS-SLTYDCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp TSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCC------------SC-SEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCccc------------ce-eeeccCCCCEEEEEEeCCCCEEEE
Confidence 47899999999 75 8999999999999999986 3210 11 111258999999999999999888
Q ss_pred e-cCCcEEEEEcC---CCCCCCCCCCCCccccCCCCceEeecc--------c--CceeeeeEEE-ecCCCcEEEEecCCC
Q 023246 79 Y-NDELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYSGH--------R--NSQTVKGVNF-FGPNDEYVMSGSDCG 143 (285)
Q Consensus 79 ~-~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~i~~~~~-~~~~~~~l~~~~~dg 143 (285)
+ .|+.|++||+. .+ +....+..+ . ....+.++.+ ++++++++++++.|+
T Consensus 129 ~s~dg~i~vwd~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 192 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQE----------------SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS 192 (437)
T ss_dssp EETTSEEEEEEEEEEEET----------------TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS
T ss_pred EeCCCEEEEEEeccccCC----------------ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC
Confidence 6 59999999995 33 233322222 1 1122555542 257899999999999
Q ss_pred eEEEEecCCCceEEEEec--ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCC-CCcccceeecccc---CC
Q 023246 144 HLFIWKKKGGKLVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP-DNAEKIMKANKQG---RE 216 (285)
Q Consensus 144 ~v~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~~~~---~~ 216 (285)
.|++||+++++++..+.. |...|.+++|+|++++|++++.||.|++||++.+.. ..+. .+...+..+.+.. ++
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKN 272 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCC
Confidence 999999999999999988 889999999999999999999999999999987764 3332 4566666664432 35
Q ss_pred CceEEEeCCCCeEEEEEecccccceeEee----------ec-------------------------cccccCCCCCcCeE
Q 023246 217 DHSRITLTPDVIMHVLRLQRRQTLAYRER----------RY-------------------------NAADFESDEEEGET 261 (285)
Q Consensus 217 ~~~~~~~s~d~~i~vwd~~~~~~~~~~~~----------~~-------------------------~~~~~~~~~~~~~v 261 (285)
+.++++++.|+.|++||+++++.+..+.. .+ +...+.....++.|
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i 352 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEE
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeE
Confidence 66899999999999999987765444321 11 12345556667788
Q ss_pred EEeecCCCCC
Q 023246 262 YLLGFSDSDA 271 (285)
Q Consensus 262 ~~~~~~~~~~ 271 (285)
.++++..++.
T Consensus 353 ~~wd~~~~~~ 362 (437)
T 3gre_A 353 VMFSLNELSS 362 (437)
T ss_dssp EEEETTCGGG
T ss_pred EEEECCCccc
Confidence 8888876653
No 50
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.98 E-value=1e-30 Score=225.76 Aligned_cols=194 Identities=21% Similarity=0.357 Sum_probs=167.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++|+|++ .+|++|+.|+.|++||.. ++ ....+ .+|...|++++|+|++++|+++ .|
T Consensus 344 ~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~-~~--------------~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 344 SSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--------------LLQTL-TGHSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETT-CC--------------EEEEE-ECCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC-CC--------------EEEEe-cCCCCCeEEEEECCCCCEEEEEeCC
Confidence 4678999999985 899999999999999964 33 22222 6789999999999999999986 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||... +.+..+.+|... |.+++| +|+++++++++.|+.|++||. +++.+..+.+
T Consensus 407 ~~v~~~~~~~-----------------~~~~~~~~~~~~--v~~~~~-s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~ 465 (577)
T 2ymu_A 407 KTVKLWNRNG-----------------QLLQTLTGHSSS--VWGVAF-SPDDQTIASASDDKTVKLWNR-NGQLLQTLTG 465 (577)
T ss_dssp SEEEEECTTC-----------------CEEEEEECCSSC--EEEEEE-CTTSSEEEEEETTSEEEEEET-TSCEEEEEEC
T ss_pred CEEEEEeCCC-----------------CEEEEecCCCCC--eEEEEE-CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcC
Confidence 9999999643 477888889876 999997 999999999999999999997 4788889999
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
|...|.+++|+|++++|++++.|++|++|+.....+..+.+|...+..+.+ .++++++++++.|+.|++||..
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~-s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAF-SPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEE-CTTSSCEEEEETTSEEEEECTT
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEE-cCCCCEEEEEECcCEEEEEeCC
Confidence 999999999999999999999999999999876666778888888877655 5677799999999999999954
No 51
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.98 E-value=5.2e-31 Score=219.95 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=187.4
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEec-
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISYN- 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~~- 80 (285)
.+.|++++|+|+++.+||+++.||.|++|++.+...... +.........+.+|...|.+++|+|++. +|+++.
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----PSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----TTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----ccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 467999999997568999999999999999986321100 0000122222368999999999999998 888864
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCC---ceE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGG---KLV 156 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~---~~~ 156 (285)
||.|++|++..... ..........+..|... |.+++| +| ++.++++++.||.|++||++++ +.+
T Consensus 203 dg~i~vwd~~~~~~---------~~~~~~~~~~~~~h~~~--v~~v~~-~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 203 DHTICLWDINATPK---------EHRVIDAKNIFTGHTAV--VEDVAW-HLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TSCEEEEETTSCCB---------GGGEEECSEEECCCSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCeEEEEeCCCCCC---------CCceeccceeecCCCCC--EeeeEE-eCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 99999999987410 00000124566678766 999997 88 7889999999999999999977 577
Q ss_pred EEEecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCC--CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEE
Q 023246 157 RLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD--FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 157 ~~~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
..+..|...|++++|+|+++ ++++++.||.|++||++... +..+..|...+..+.+......++++++.|+.|++||
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 78889999999999999988 58899999999999998743 4566678888888877555556799999999999999
Q ss_pred ecccc--------------c----------ceeEeeecccc-ccCCCCCcCeEEEeecCCC
Q 023246 234 LQRRQ--------------T----------LAYRERRYNAA-DFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 234 ~~~~~--------------~----------~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~ 269 (285)
+.... . +..+.+.++.. .+.+...++.|.++....+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 98721 1 22234555555 4566667777888776544
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=8e-31 Score=219.56 Aligned_cols=258 Identities=10% Similarity=0.122 Sum_probs=180.4
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCC------------cceEEEEEe
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN------------IHITGLAYS 70 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~i~~s 70 (285)
...|++++|+|++ .+||+|+.||.|+|||+.+++...... ...+.....+.+|. ..|++++|+
T Consensus 28 ~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~----~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 28 ADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHS----RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp GGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCC----CCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCccc----ccceeEecccccccccccccccccccCceEEEEEc
Confidence 4689999999975 899999999999999998765211100 00111222336787 889999999
Q ss_pred cCC--CEEEEe-cCCcEEEEEcCCCCCCC-CCCCC--------CccccCCC--------------CceE-eecccCceee
Q 023246 71 NTS--ELLISY-NDELVYLFEKNMGLGPS-PLSLS--------PEDLQKRE--------------EPQV-YSGHRNSQTV 123 (285)
Q Consensus 71 ~~~--~~l~s~-~d~~i~iwd~~~~~~~~-~~~~~--------~~~~~~~~--------------~~~~-~~~~~~~~~i 123 (285)
|++ .+|+++ .|++|++|++....... ...+. ...+.... .... ..+|... |
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v 180 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH--I 180 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC--C
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc--e
Confidence 998 677774 69999999997631000 00000 00000000 0112 2467766 9
Q ss_pred eeEEEecCCCcEEEEecCCCeEEEEecCC-CceEEE-------EecccccceEeEEcCCC-CeEEEEecCCcEEEEcCCC
Q 023246 124 KGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GKLVRL-------MVGDRHVVNQLEPHPHI-PMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~-------~~~h~~~v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~ 194 (285)
.+++| +|++++|++| .|+.|++||+++ ++.+.. +.+|...|.+++|+|++ ++|++++.|+.|++||++.
T Consensus 181 ~~~~~-~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 181 NSISI-NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp CEEEE-CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred EEEEE-cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC
Confidence 99997 9999999999 799999999984 444442 45799999999999998 8999999999999999987
Q ss_pred CCC-----CCCCCCcc------------cceeeccccCCCceEEEeCCCCeEEEEEecc-ccccee--------------
Q 023246 195 TDF-----PPLPDNAE------------KIMKANKQGREDHSRITLTPDVIMHVLRLQR-RQTLAY-------------- 242 (285)
Q Consensus 195 ~~~-----~~~~~~~~------------~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~-~~~~~~-------------- 242 (285)
+.. ..+..+.. .+..+.+ .+++.++++++. +.|++||++. .+.+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKF-SHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEE-CTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHH
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEE-CCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccc
Confidence 763 44555554 5555544 556778888888 9999999986 443332
Q ss_pred -----------EeeeccccccCCCCCcCeEEEeecCCCCC
Q 023246 243 -----------RERRYNAADFESDEEEGETYLLGFSDSDA 271 (285)
Q Consensus 243 -----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 271 (285)
+.+++++..++....++.|++++...+..
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 34566777777788888999999887653
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.2e-30 Score=213.91 Aligned_cols=248 Identities=12% Similarity=0.144 Sum_probs=191.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC-CCEEEEe-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELLISY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~-~~~l~s~-~ 80 (285)
..+|++++|+|++ .+|++|+.||.|++||+.+.... . .....+.+|...|++++|+|+ +++|+++ .
T Consensus 67 ~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~-----~------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 134 (416)
T 2pm9_A 67 DSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNA-----I------NSMARFSNHSSSVKTVKFNAKQDNVLASGGN 134 (416)
T ss_dssp SSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSC-----C------CEEEECCCSSSCCCEEEECSSSTTBEEEECS
T ss_pred CCceEEEEECCCC-CeEEEEccCCeEEEeeccccccc-----c------cchhhccCCccceEEEEEcCCCCCEEEEEcC
Confidence 4679999999975 89999999999999999873210 0 122233789999999999998 7888886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-CcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
|+.|++||+........ . . .......+..|... |.+++| +|+ +.++++++.||.|++||+++++.+..+
T Consensus 135 dg~v~iwd~~~~~~~~~-~-----~-~~~~~~~~~~~~~~--v~~~~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 204 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPS-N-----Y-TPLTPGQSMSSVDE--VISLAW-NQSLAHVFASAGSSNFASIWDLKAKKEVIHL 204 (416)
T ss_dssp SSCEEBCBTTTTSSCTT-T-----C-CCBCCCCSCCSSCC--CCEEEE-CSSCTTEEEEESSSSCEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCccccc-c-----c-cccccccccCCCCC--eeEEEe-CCCCCcEEEEEcCCCCEEEEECCCCCcceEE
Confidence 99999999987620000 0 0 00112233556655 999997 888 789999999999999999999999888
Q ss_pred ecc------cccceEeEEcCCC-CeEEEEecCC---cEEEEcCCCC-C-CCCCC-CCcccceeeccccCCCceEEEeCCC
Q 023246 160 VGD------RHVVNQLEPHPHI-PMFATCGIEK---TVKLWAPMPT-D-FPPLP-DNAEKIMKANKQGREDHSRITLTPD 226 (285)
Q Consensus 160 ~~h------~~~v~~~~~~p~~-~~l~t~~~d~---~i~iwd~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d 226 (285)
..| ...|.+++|+|++ .++++++.|+ .|++||++.. . ...+. +|...+..+.+...+..++++++.|
T Consensus 205 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 205 SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 876 7889999999997 5799999998 9999999875 3 45566 6888887777655477899999999
Q ss_pred CeEEEEEecccccceeE----------eeeccc-cccCCCCCcCeEEEeecCCCCCC
Q 023246 227 VIMHVLRLQRRQTLAYR----------ERRYNA-ADFESDEEEGETYLLGFSDSDAS 272 (285)
Q Consensus 227 ~~i~vwd~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 272 (285)
+.|++||+++.+.+..+ .+.++. ..+.....++.+.++++..+...
T Consensus 285 g~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 285 NTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99999999887655443 345555 56677777888999998876543
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=3.5e-31 Score=212.24 Aligned_cols=205 Identities=13% Similarity=0.136 Sum_probs=159.4
Q ss_pred ccceeEEEEcCC-CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEEe
Q 023246 3 SIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLISY 79 (285)
Q Consensus 3 ~~~v~~~~~s~~-~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s~ 79 (285)
..+|++++|+|. ++.+|++|+.|++|++||+.+++.. .. ..+.+|...|++++|+|+ +.+|+++
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~------------~~-~~~~~h~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE------------KS-HEHAGHDSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC------------EE-EEECCCSSCCCEEEECCTTTCSCEEEE
T ss_pred CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce------------EE-EEccCCCCceEEEEECCCCCCcEEEEE
Confidence 568999999863 2489999999999999999876421 11 122689999999999998 7788886
Q ss_pred c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-----------------CcEEEEecC
Q 023246 80 N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-----------------DEYVMSGSD 141 (285)
Q Consensus 80 ~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------~~~l~~~~~ 141 (285)
+ |++|++|++.... .......+.+|... +.+++| +|+ +++|++|+.
T Consensus 124 s~D~~i~lwd~~~~~-------------~~~~~~~~~~h~~~--v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 187 (316)
T 3bg1_A 124 SSDGAISLLTYTGEG-------------QWEVKKINNAHTIG--CNAVSW-APAVVPGSLIDHPSGQKPNYIKRFASGGC 187 (316)
T ss_dssp CSSSCEEEEEECSSS-------------CEEECCBTTSSSSC--BCCCEE-CCCCCC------CCSCCCCCCCBEECCBT
T ss_pred cCCCCEEEEecCCCC-------------CcceeeeeccccCC--cceEEE-ccccCCccccccccccCccccceEEEecC
Confidence 5 9999999997641 00113445567655 888986 776 478999999
Q ss_pred CCeEEEEecCCC---ceEEEEecccccceEeEEcCCC----CeEEEEecCCcEEEEcCCCCC-----CCCCCCCccccee
Q 023246 142 CGHLFIWKKKGG---KLVRLMVGDRHVVNQLEPHPHI----PMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMK 209 (285)
Q Consensus 142 dg~v~vwd~~~~---~~~~~~~~h~~~v~~~~~~p~~----~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~ 209 (285)
|+.|++||++.. +++..+.+|...|.+++|+|++ .+|++++.|++|++|+++... ...+..|...+..
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~ 267 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWH 267 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEE
T ss_pred CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEE
Confidence 999999999755 4667788999999999999986 789999999999999987521 1223345566666
Q ss_pred eccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 210 ANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 210 ~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+.+ .+++.++++++.|+.|++|+....
T Consensus 268 v~~-sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 268 VSW-SITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEE-CTTTCCEEEEESSSCEEEEEECTT
T ss_pred EEE-cCCCCEEEEEcCCCeEEEEEECCC
Confidence 654 556778999999999999998644
No 55
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=3.1e-30 Score=208.41 Aligned_cols=214 Identities=14% Similarity=0.114 Sum_probs=166.9
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec--CCCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~--~~~~l~s~ 79 (285)
+..+|++++|+|++ .+|++|+.||.|++||+.++... +.....+.+|...|++++|+| ++++|+++
T Consensus 10 H~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 10 HDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN-----------WELSDSWRAHDSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC-----------EEEEEEEECCSSCEEEEEECCGGGCSEEEEE
T ss_pred cccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc-----------ceecceeccCCCcEEEEEEcCCCCCCEEEEE
Confidence 45789999999975 89999999999999999876411 011222268999999999999 58888885
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC--CcEEEEecCCCeEEEEecCCCceE
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGKLV 156 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~~~ 156 (285)
.|+.|++||+..+.... .....+.+..+..|... |.+++| +|+ ++++++++.||.|++||+++++.+
T Consensus 78 ~~dg~v~vwd~~~~~~~~-------~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEEC-------SGRRWNKLCTLNDSKGS--LYSVKF-APAHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp ETTSCEEEEEECTTSCTT-------SSCSEEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred cCCCeEEEEecCCCcccc-------cccCcceeeeecccCCc--eeEEEE-cCCCCCcEEEEecCCCcEEEecCCChHHh
Confidence 59999999998752100 00111235667778766 999997 998 999999999999999999887654
Q ss_pred EEEe-------------cccccceEeEEcCC---CCeEEEEecCCcEEEEcCCCCC---CCCCCCCcccceeeccccCCC
Q 023246 157 RLMV-------------GDRHVVNQLEPHPH---IPMFATCGIEKTVKLWAPMPTD---FPPLPDNAEKIMKANKQGRED 217 (285)
Q Consensus 157 ~~~~-------------~h~~~v~~~~~~p~---~~~l~t~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~ 217 (285)
..+. .|...+.+++|+|+ +.++++++.|+.+.+|+...+. ...+.+|...+..+.+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~ 227 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIG 227 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSS
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCC
Confidence 3322 57789999999997 8899999999999888877665 355667888887776644332
Q ss_pred ---ceEEEeCCCCeEEEEEeccc
Q 023246 218 ---HSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 218 ---~~~~~~s~d~~i~vwd~~~~ 237 (285)
.++++++.|+.|++||++..
T Consensus 228 ~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 228 RWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CSSEEEEEEETTSCEEEEEEEEC
T ss_pred CcceEEEEEcCCCeEEEEeCCCC
Confidence 68999999999999999874
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.5e-31 Score=218.52 Aligned_cols=212 Identities=16% Similarity=0.274 Sum_probs=170.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC-CCEEEEe-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELLISY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~-~~~l~s~-~ 80 (285)
..+|++++|+|+++.+|++++.|+.|++||+.+++..... ...+.. .....|...|.+++|+|+ +.+|+++ .
T Consensus 113 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 113 SSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN-----YTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGS 186 (416)
T ss_dssp SSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT-----CCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESS
T ss_pred ccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc-----cccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcC
Confidence 5689999999985689999999999999999877521000 000011 122678999999999999 6788886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc------cCceeeeeEEEecCCC-cEEEEecCCC---eEEEEec
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH------RNSQTVKGVNFFGPND-EYVMSGSDCG---HLFIWKK 150 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~-~~l~~~~~dg---~v~vwd~ 150 (285)
|+.|++||+.++ +.+..+..+ ... +.+++| +|++ .++++++.|+ .|++||+
T Consensus 187 dg~v~iwd~~~~----------------~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 187 SNFASIWDLKAK----------------KEVIHLSYTSPNSGIKQQ--LSVVEW-HPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp SSCEEEEETTTT----------------EEEEEECCCCCSSCCCCC--EEEEEE-CSSCTTEEEEEECCSSSCCCCEEET
T ss_pred CCCEEEEECCCC----------------CcceEEeccccccccCCc--eEEEEE-CCCCCCEEEEEECCCCCceEEEEeC
Confidence 999999999887 566666655 444 999997 8886 6899999998 9999999
Q ss_pred CCC-ceEEEEe-cccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCC
Q 023246 151 KGG-KLVRLMV-GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPD 226 (285)
Q Consensus 151 ~~~-~~~~~~~-~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 226 (285)
+++ +++..+. +|...|.+++|+| ++++|++++.|+.|++||++.++ +..+..|...+..+.+......++++++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 986 5677777 8999999999999 89999999999999999998776 456667777777776644344799999999
Q ss_pred CeEEEEEeccccc
Q 023246 227 VIMHVLRLQRRQT 239 (285)
Q Consensus 227 ~~i~vwd~~~~~~ 239 (285)
+.|++|++.....
T Consensus 328 ~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 328 NKIEVQTLQNLTN 340 (416)
T ss_dssp SEEEEEESCCCCC
T ss_pred CcEEEEEccCCCC
Confidence 9999999987653
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=3.4e-30 Score=210.61 Aligned_cols=232 Identities=11% Similarity=0.136 Sum_probs=178.7
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+..+|++++|+|++ .+|++|+.|+.|++||+.+++. .....+.+|...|.+++|+|++++|+++ .
T Consensus 7 ~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 7 LVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW-------------VQVHELKEHNGQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp CSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE-------------EEEEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred cCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcE-------------EeeeeecCCCCcccEEEEeCCCCEEEEEcC
Confidence 56789999999985 8999999999999999987741 1222226899999999999999999885 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceE--eecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCce---
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV--YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL--- 155 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--- 155 (285)
|+.|++||+.++ +.... +..|... +.+++| +|+++++++++.|+.|++||++.++.
T Consensus 73 dg~i~vwd~~~~----------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~v~i~d~~~~~~~~~ 133 (372)
T 1k8k_C 73 DRNAYVWTLKGR----------------TWKPTLVILRINRA--ARCVRW-APNEKKFAVGSGSRVISICYFEQENDWWV 133 (372)
T ss_dssp TSCEEEEEEETT----------------EEEEEEECCCCSSC--EEEEEE-CTTSSEEEEEETTSSEEEEEEETTTTEEE
T ss_pred CCeEEEEECCCC----------------eeeeeEEeecCCCc--eeEEEE-CCCCCEEEEEeCCCEEEEEEecCCCccee
Confidence 999999999765 33333 3456655 999997 99999999999999999999988763
Q ss_pred EEEE-ecccccceEeEEcCCCCeEEEEecCCcEEEEcCC------------------CCC-CCCCCCCcccceeeccccC
Q 023246 156 VRLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM------------------PTD-FPPLPDNAEKIMKANKQGR 215 (285)
Q Consensus 156 ~~~~-~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~------------------~~~-~~~~~~~~~~~~~~~~~~~ 215 (285)
...+ ..|...|.+++|+|++++|++++.|+.|++||++ .+. +..+..|...+..+.+ .+
T Consensus 134 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~ 212 (372)
T 1k8k_C 134 CKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF-SA 212 (372)
T ss_dssp EEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE-CS
T ss_pred eeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE-CC
Confidence 3333 5688999999999999999999999999999964 222 3345566666666654 45
Q ss_pred CCceEEEeCCCCeEEEEEecccccceeE----------eeeccccccCCCCCcCeEEEeecCC
Q 023246 216 EDHSRITLTPDVIMHVLRLQRRQTLAYR----------ERRYNAADFESDEEEGETYLLGFSD 268 (285)
Q Consensus 216 ~~~~~~~~s~d~~i~vwd~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~ 268 (285)
++.++++++.|+.|++||+++.+.+..+ .+.+++..+..+ .++.+++++..+
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 6678999999999999999887655443 334444444444 455666666655
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=6.2e-31 Score=213.73 Aligned_cols=237 Identities=10% Similarity=0.078 Sum_probs=185.0
Q ss_pred ccceeEEEEcCCCCcEEEEeeC---CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC---CCEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT---SELL 76 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~---~~~l 76 (285)
..+|++++|+|++..++++|+. |+.|++||+.+++. ......+|...|.+++|+|+ +.+|
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--------------KLLREIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--------------EEEEEEEESSCEEEEECTTCCTTTCCE
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--------------cceeeecccCcEEEEEEcCCCCCCceE
Confidence 5689999999987667778877 99999999998762 22222468899999999998 6888
Q ss_pred EEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCC-CceEeecccCceeeeeEEE-----ecCCCcEEEEecCCCeEEEEe
Q 023246 77 ISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNF-----FGPNDEYVMSGSDCGHLFIWK 149 (285)
Q Consensus 77 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~-----~~~~~~~l~~~~~dg~v~vwd 149 (285)
+++ .|+.|++||+..+ + .+..+.+|... |.++.| ++++++++++++.||.|++||
T Consensus 84 ~~~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAP----------------EMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp EEEETTSCEEEECTTSC----------------SSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred EEecCCCeEEEEeCCCC----------------CccEEEEEecccc--eEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 885 5999999999877 4 77888889876 999854 268999999999999999999
Q ss_pred cCCCc-eEEEEecccc----cceEeE----EcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccC--CCc
Q 023246 150 KKGGK-LVRLMVGDRH----VVNQLE----PHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGR--EDH 218 (285)
Q Consensus 150 ~~~~~-~~~~~~~h~~----~v~~~~----~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 218 (285)
+++++ .+..+..|.+ .|.+++ |+|+++++++++.|+.|++||++.........+...+..+.+... +..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 225 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMN 225 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCC
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCC
Confidence 99887 6777766554 788888 789999999999999999999988776444556666666655432 667
Q ss_pred eEEEeCCCCeEEEEEeccccccee---------------Eeeecccc-ccCCCCCcCeEEEeecCCCCC
Q 023246 219 SRITLTPDVIMHVLRLQRRQTLAY---------------RERRYNAA-DFESDEEEGETYLLGFSDSDA 271 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 271 (285)
++++++.|+.|++||++..+.... +.+.++.. .+.....++.+.+++...+..
T Consensus 226 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 226 KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 899999999999999987654432 23455555 566677778888888775543
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.3e-29 Score=209.74 Aligned_cols=233 Identities=12% Similarity=0.181 Sum_probs=182.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .+|++|+.||.|++||+.+++ ....+ .+|...|.+++|+ +++|+++ .|
T Consensus 134 ~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~--------------~~~~~-~~~~~~v~~~~~~--~~~l~~~~~d 195 (401)
T 4aez_A 134 STYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQT--------------KLRTM-AGHQARVGCLSWN--RHVLSSGSRS 195 (401)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCe--------------EEEEe-cCCCCceEEEEEC--CCEEEEEcCC
Confidence 5689999999975 899999999999999998876 23333 6899999999994 4677775 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||+.... .....+..|... |.+++| +|+++++++++.|+.|++||+++++.+..+..
T Consensus 196 g~i~i~d~~~~~---------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 257 (401)
T 4aez_A 196 GAIHHHDVRIAN---------------HQIGTLQGHSSE--VCGLAW-RSDGLQLASGGNDNVVQIWDARSSIPKFTKTN 257 (401)
T ss_dssp SEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEETTCSSEEEEECC
T ss_pred CCEEEEecccCc---------------ceeeEEcCCCCC--eeEEEE-cCCCCEEEEEeCCCeEEEccCCCCCccEEecC
Confidence 999999998542 467788888876 999997 99999999999999999999999999999999
Q ss_pred ccccceEeEEcCCCCe-EEEEe--cCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEE--eCCCCeEEEEEecc
Q 023246 162 DRHVVNQLEPHPHIPM-FATCG--IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRIT--LTPDVIMHVLRLQR 236 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~-l~t~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~d~~i~vwd~~~ 236 (285)
|...|.+++|+|++.. +++++ .|+.|++||++.+.......+...+..+.+ .+++..+++ ++.|+.|++|++.+
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIW-SPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEE-CSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEE-CCCCCeEEEEeecCCCcEEEEecCC
Confidence 9999999999997765 55654 799999999987764322234455555544 455666666 66899999999987
Q ss_pred ccccee------------EeeeccccccCCCCCcCeEEEeecCCCCCC
Q 023246 237 RQTLAY------------RERRYNAADFESDEEEGETYLLGFSDSDAS 272 (285)
Q Consensus 237 ~~~~~~------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 272 (285)
.+.... +.+.+++..+.....++.+.++++.+++.-
T Consensus 337 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 533322 245666667777777888999998877643
No 60
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.7e-30 Score=231.61 Aligned_cols=232 Identities=18% Similarity=0.237 Sum_probs=189.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+||+|+.||.|+|||+.+++ ....+ .+|..+|++++|+|++++|+++ .|
T Consensus 13 ~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~--------------~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 13 SDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQV--------------EVRSI-QVTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE--------------EEEEE-ECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCc--------------eEEEE-ecCCCcEEEEEEeCCCCEEEEEeCC
Confidence 5689999999986 899999999999999998876 22333 6799999999999999999886 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCC-ceEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~ 160 (285)
+.|++||+.++ +.+..+.+|... |.+++| +|+++++++++.||.|++||+.++ .....+.
T Consensus 77 g~i~vw~~~~~----------------~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 77 FRIRVFNYNTG----------------EKVVDFEAHPDY--IRSIAV-HPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp SEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred CeEEEEECCCC----------------cEEEEEecCCCC--EEEEEE-eCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 99999999887 678888888876 999997 999999999999999999999887 6678888
Q ss_pred cccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCCCCCc-ccceeeccccC-CCceEEEeCCCCeEEEEEecc
Q 023246 161 GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA-EKIMKANKQGR-EDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 161 ~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~-~~~~~~~~~~~-~~~~~~~~s~d~~i~vwd~~~ 236 (285)
+|...|.+++|+| ++..|++++.||.|++||+..... ..+..+. ..+....+... ++.++++++.|+.|++||+.+
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 9999999999999 888999999999999999976653 3333333 45555544332 567899999999999999887
Q ss_pred cccceeE----------eeeccccccCCCCCcCeEEEeecCCC
Q 023246 237 RQTLAYR----------ERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 237 ~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
++.+..+ .+.+++..+.....++.+.+++...+
T Consensus 218 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 218 KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 6544433 34555556666666777888877654
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9.1e-30 Score=209.22 Aligned_cols=205 Identities=12% Similarity=0.101 Sum_probs=159.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
....|.+++|+|+++.+|++++.|+.|++||+.+... ........|...|.+++|+|++++|+++ .
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI-------------QVFAKTDSWDYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE-------------EEEECCCCSSCCEEEEEEETTTTEEEEEET
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce-------------EEEeccCCCCCCeEEEEECCCCCEEEEECC
Confidence 3578999999995458999999999999999985431 1111114566889999999999999986 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCC----Cce
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKG----GKL 155 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~----~~~ 155 (285)
|+.|++||+. + +.+..+..|... |.+++| +|+++ ++++++.|+.|++||+++ +.+
T Consensus 184 d~~i~i~d~~-~----------------~~~~~~~~h~~~--v~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 243 (383)
T 3ei3_B 184 TGRLLLLGLD-G----------------HEIFKEKLHKAK--VTHAEF-NPRCDWLMATSSVDATVKLWDLRNIKDKNSY 243 (383)
T ss_dssp TSEEEEEETT-S----------------CEEEEEECSSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEEGGGCCSTTCE
T ss_pred CCCEEEEECC-C----------------CEEEEeccCCCc--EEEEEE-CCCCCCEEEEEeCCCEEEEEeCCCCCcccce
Confidence 9999999995 3 577888888876 999997 99998 999999999999999987 566
Q ss_pred EEEEecccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCCCCCc-------ccceeecc----------ccCC
Q 023246 156 VRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA-------EKIMKANK----------QGRE 216 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~-------~~~~~~~~----------~~~~ 216 (285)
+..+ +|...|.+++|+| ++++|++++.|+.|++||++.... ..+..+. ..+ ...+ ..++
T Consensus 244 ~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~s~d 321 (383)
T 3ei3_B 244 IAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI-KATWHPMYDLIVAGRYPD 321 (383)
T ss_dssp EEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCC-CCEECSSSSEEEEECBCC
T ss_pred EEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccce-EEeccCCCCceEEEecCC
Confidence 6666 6999999999999 999999999999999999987653 3332221 111 1111 1222
Q ss_pred CceEEEeCCCCeEEEEEecccccceeE
Q 023246 217 DHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 217 ~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
+.+ +++.|+.|++||+.+++.+..+
T Consensus 322 g~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 322 DQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp TTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred ccc--ccCCCCeEEEEecCCCceeeee
Confidence 323 6778999999999887665554
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=6.8e-31 Score=214.07 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=171.7
Q ss_pred ccceeEEEEcCCC---CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEE
Q 023246 3 SIRLNAIVIDPRN---PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLIS 78 (285)
Q Consensus 3 ~~~v~~~~~s~~~---~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s 78 (285)
...|++++|+|++ +.+|++|+.||.|++||+.+++ ....+ .+|...|.+++|+| ++.+|++
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--------------~~~~~-~~~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--------------CIKHY-VGHGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--------------EEEEE-ESCCSCEEEEEECSSCTTEEEE
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--------------Eeeee-cCCCCcEEEEEECCCCCCEEEE
Confidence 3679999999973 2699999999999999999876 22222 67999999999999 8888888
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe---ecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
+ .|+.|++||+..+ +.+..+ ..|... |.+++| +|+++++++++.||.|++||+++++
T Consensus 134 ~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 134 VSKDHALRLWNIQTD----------------TLVAIFGGVEGHRDE--VLSADY-DLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EETTSCEEEEETTTT----------------EEEEEECSTTSCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EeCCCeEEEEEeecC----------------eEEEEecccccccCc--eeEEEE-CCCCCEEEEecCCCCEEEEECCCCc
Confidence 6 5999999999877 566666 567766 999997 9999999999999999999998776
Q ss_pred eEEEEe----------------------------cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC---------
Q 023246 155 LVRLMV----------------------------GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF--------- 197 (285)
Q Consensus 155 ~~~~~~----------------------------~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~--------- 197 (285)
.+..+. .|...|.+++|+ ++++++++.|+.|++||++....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 272 (366)
T 3k26_A 195 MMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 272 (366)
T ss_dssp HHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTC
T ss_pred cccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCC
Confidence 543333 389999999998 67999999999999999876532
Q ss_pred ------CCCCCCcccceeeccccCC--CceEEEeCCCCeEEEEEecccccce----------------eEeeeccccccC
Q 023246 198 ------PPLPDNAEKIMKANKQGRE--DHSRITLTPDVIMHVLRLQRRQTLA----------------YRERRYNAADFE 253 (285)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~--~~~~~~~s~d~~i~vwd~~~~~~~~----------------~~~~~~~~~~~~ 253 (285)
..+..|...+..+.+ .++ +.++++++.||.|++||+...+... .+.+.+++..+.
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~-s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 351 (366)
T 3k26_A 273 SNVTILGRFDYSQCDIWYMRF-SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 351 (366)
T ss_dssp CCEEEEEEEECSSCCSSCCCC-EECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred cchheeccccccCCcEEEEEE-cCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEE
Confidence 112233334433333 334 6789999999999999998764332 123344444455
Q ss_pred CCCCcCeEEEeec
Q 023246 254 SDEEEGETYLLGF 266 (285)
Q Consensus 254 ~~~~~~~v~~~~~ 266 (285)
....++.|+++++
T Consensus 352 s~~~dg~i~iwd~ 364 (366)
T 3k26_A 352 AVCDDASIWRWDR 364 (366)
T ss_dssp EEETTSEEEEEEC
T ss_pred EEeCCCEEEEEEe
Confidence 5555555555554
No 63
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=6.4e-30 Score=207.75 Aligned_cols=237 Identities=9% Similarity=0.094 Sum_probs=180.5
Q ss_pred ccceeEEEEcCCC--CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEE------ecCCC
Q 023246 3 SIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY------SNTSE 74 (285)
Q Consensus 3 ~~~v~~~~~s~~~--~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~------s~~~~ 74 (285)
..+|++++|+|++ +.+|++|+.||.|++||+.+++ .....+.+|...|.++.| +|+++
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~s~~~~ 130 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE--------------MPVYSVKGHKEIINAIDGIGGLGIGEGAP 130 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--------------SCSEEECCCSSCEEEEEEESGGGCC-CCC
T ss_pred cCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--------------ccEEEEEecccceEEEeeccccccCCCcc
Confidence 4689999999973 4899999999999999999775 122223689999999965 67888
Q ss_pred EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC--ceeeeeEEE---ecCCCcEEEEecCCCeEEEE
Q 023246 75 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNF---FGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 75 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~---~~~~~~~l~~~~~dg~v~vw 148 (285)
+|+++ .|+.|++||+..+. ..+..+..+.. ...+.+++| ++++++++++++.||.|++|
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 195 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKD---------------DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLF 195 (357)
T ss_dssp EEEEEETTSCEEEECTTSCS---------------SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCC---------------CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEE
Confidence 88886 59999999998762 25666665543 123888884 37999999999999999999
Q ss_pred ecCCCceEEEEecccccceEeEEcC---CCCeEEEEecCCcEEEEcCCCCCC-CCCC-----CCcccceeeccccCCCce
Q 023246 149 KKKGGKLVRLMVGDRHVVNQLEPHP---HIPMFATCGIEKTVKLWAPMPTDF-PPLP-----DNAEKIMKANKQGREDHS 219 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v~~~~~~p---~~~~l~t~~~d~~i~iwd~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~ 219 (285)
|+++++.... ..|...|.+++|+| ++.+|++++.|+.|++||++.... ..+. .|...+..+.+......+
T Consensus 196 d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (357)
T 3i2n_A 196 DLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNREL 274 (357)
T ss_dssp ETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred ECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcE
Confidence 9998887544 56889999999999 899999999999999999976653 3333 677777777664333338
Q ss_pred EEEeCCCCeEEEEEecccccc-----------------------------eeEeeeccccccC-CCCCcCeEEEeecCCC
Q 023246 220 RITLTPDVIMHVLRLQRRQTL-----------------------------AYRERRYNAADFE-SDEEEGETYLLGFSDS 269 (285)
Q Consensus 220 ~~~~s~d~~i~vwd~~~~~~~-----------------------------~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~ 269 (285)
+++++.|+.|++||++..... ..+.+.+++..+. +...++.+.++++...
T Consensus 275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999999999854322 2234566666666 5666777888777654
No 64
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.2e-30 Score=218.06 Aligned_cols=233 Identities=15% Similarity=0.104 Sum_probs=166.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
+.++|++++|+|.++.+|++|+.||+|++||+.++... .......+...+.+++|+|++.+|++++
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR-------------VFASSDTINIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-------------EEECCSSCSCCCCCEEEETTTTEEEEECS
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-------------EEeccCCCCccEEEEEECCCCCEEEEEeC
Confidence 35689999999966689999999999999999865421 1111133455688999999999999975
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCCCceEE--
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGKLVR-- 157 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~-- 157 (285)
|+.|++||+... .+..+.+|... |.+++| +|+++ ++++++.|+.|++||+++.+...
T Consensus 230 dg~i~~wd~~~~-----------------~~~~~~~h~~~--v~~v~~-~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 230 VGNVILLNMDGK-----------------ELWNLRMHKKK--VTHVAL-NPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp SSBEEEEESSSC-----------------BCCCSBCCSSC--EEEEEE-CTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred CCcEeeeccCcc-----------------eeEEEecccce--EEeeee-cCCCceEEEEecCcceeeEEecccccccceE
Confidence 999999998753 56677888876 999997 88775 78899999999999998766433
Q ss_pred -EEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcc------cceeeccccCCCceEEE-------
Q 023246 158 -LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAE------KIMKANKQGREDHSRIT------- 222 (285)
Q Consensus 158 -~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~------- 222 (285)
...+|...|++++|+|++++|++++.|++|++||++.+.. ..+..|.. ..+...+ ......+++
T Consensus 290 ~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 290 LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW-HPRYNLIVVGRYPDPN 368 (435)
T ss_dssp SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE-CSSSSCEEEECCCCTT
T ss_pred EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE-cCCCCEEEEEEcCCCC
Confidence 3357999999999999999999999999999999977642 22222211 1111111 112222222
Q ss_pred -----eCCCCeEEEEEecccccceeE------------eeeccccccCCCCCcCeEEEeecCCC
Q 023246 223 -----LTPDVIMHVLRLQRRQTLAYR------------ERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 223 -----~s~d~~i~vwd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
+..++.|++||..+++.+..+ .++|++..++++. ++.|.+++..++
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred eEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 233468999999887655443 2455666666554 456888777665
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=207.16 Aligned_cols=207 Identities=12% Similarity=0.098 Sum_probs=170.6
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+..+|++++|+|++ .+|++|+.||.|++||+.+++ ....+ .+|...|.+++|+|++++|+++ .
T Consensus 31 h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~--------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 31 HERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE--------------RLGTL-DGHTGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp CSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEECTTSSEEEEEET
T ss_pred eeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch--------------hhhhh-hhcCCcEEEEEEcCCCCEEEEEeC
Confidence 35789999999975 899999999999999998876 22333 6899999999999999999885 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC-----CeEEEEecCCCc-
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-----GHLFIWKKKGGK- 154 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~- 154 (285)
|+.|++||+.++ +.+..+. +... +.+++| +|+++++++++.+ +.|++||+....
T Consensus 95 dg~i~iwd~~~~----------------~~~~~~~-~~~~--v~~~~~-~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 95 DYSIKLWDVSNG----------------QCVATWK-SPVP--VKRVEF-SPCGNYFLAILDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp TTEEEEEETTTC----------------CEEEEEE-CSSC--EEEEEE-CTTSSEEEEEECCBTTBCCEEEEEEEEECTT
T ss_pred CCeEEEEECCCC----------------cEEEEee-cCCC--eEEEEE-ccCCCEEEEecCCccCCCCEEEEEEecCCcc
Confidence 999999999887 5666666 5544 999997 9999999999998 999999987653
Q ss_pred ----------eEEEEecccc--cceEeEEcCCCCeEEEEecCCcEEEEcCCC-CC-CCCCCCCcccceeeccccCCCceE
Q 023246 155 ----------LVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TD-FPPLPDNAEKIMKANKQGREDHSR 220 (285)
Q Consensus 155 ----------~~~~~~~h~~--~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
.+..+..|.. .+.+++|+|++++|++++.||.|++||++. .. +..+..|...+..+.+ .+++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l 233 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQF-SPDLTYF 233 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEE-CTTSSEE
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEE-CCCCCEE
Confidence 3344555665 899999999999999999999999999987 33 4556667777766655 4567789
Q ss_pred EEeCCCCeEEEEEecccccceeEee
Q 023246 221 ITLTPDVIMHVLRLQRRQTLAYRER 245 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~~~~~~~ 245 (285)
++++.|+.|++||+++.+.+..+..
T Consensus 234 ~~~~~d~~i~v~d~~~~~~~~~~~~ 258 (369)
T 3zwl_B 234 ITSSRDTNSFLVDVSTLQVLKKYET 258 (369)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEecCCceEEEEECCCCceeeeecC
Confidence 9999999999999998776665543
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.1e-29 Score=210.18 Aligned_cols=241 Identities=12% Similarity=0.077 Sum_probs=180.7
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEe-cCCc
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-NDEL 83 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~-~d~~ 83 (285)
...++++|+...++++++.||.|+||++....... .....+.+|...|++++|+| ++++|+++ .|+.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-----------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~ 105 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-----------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCT 105 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-----------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-----------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCe
Confidence 34588888754566678999999999996542110 11222378999999999999 88899986 5999
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC-cEEEEecCCCeEEEEecCCCceEEEE--e
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRLM--V 160 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~--~ 160 (285)
|++|++..+... ....+.+..+.+|... |.+++| +|++ +++++++.||.|++||+++++.+..+ .
T Consensus 106 v~vw~~~~~~~~---------~~~~~~~~~~~~h~~~--v~~~~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 173 (402)
T 2aq5_A 106 VMVWEIPDGGLV---------LPLREPVITLEGHTKR--VGIVAW-HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD 173 (402)
T ss_dssp EEEEECCTTCCS---------SCBCSCSEEEECCSSC--EEEEEE-CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT
T ss_pred EEEEEccCCCCc---------cccCCceEEecCCCCe--EEEEEE-CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC
Confidence 999999875100 0001356788889876 999997 9997 69999999999999999999999999 7
Q ss_pred cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCC-CCCccc-ceeeccccCCCceEEEe---CCCCeEEEEEe
Q 023246 161 GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPL-PDNAEK-IMKANKQGREDHSRITL---TPDVIMHVLRL 234 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~i~vwd~ 234 (285)
.|...|.+++|+|++++|++++.|+.|++||++.+.. ..+ ..|... +....+ .+++.+++++ +.|+.|++||+
T Consensus 174 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 174 VHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF-VSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE-CSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE-cCCCcEEEEeccCCCCceEEEEcC
Confidence 8999999999999999999999999999999987763 344 455554 444433 4567788888 79999999999
Q ss_pred ccccccee------------EeeeccccccC-CCCCcCeEEEeecCCCC
Q 023246 235 QRRQTLAY------------RERRYNAADFE-SDEEEGETYLLGFSDSD 270 (285)
Q Consensus 235 ~~~~~~~~------------~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 270 (285)
+....... +.+.+++..+. .+..++.|.++++..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 87654211 13344555453 34456678887776654
No 67
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.9e-30 Score=219.15 Aligned_cols=162 Identities=10% Similarity=0.113 Sum_probs=137.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEE--EEecCC-CEEEEe
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGL--AYSNTS-ELLISY 79 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i--~~s~~~-~~l~s~ 79 (285)
...|++++|+|+ .+|++|+.||+|++||+.+++ .+...+.+|...|+++ .|+|++ ++|+++
T Consensus 266 ~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~--------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 266 DSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPE--------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp TTCEEEEEESSS--SEEEEEETTSEEEEEETTBCS--------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred CCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCC--------------CceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 467999999984 589999999999999998764 2223337899999999 578888 888886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
.|++|+|||++++ +....+.+|.....+.+++| +|+++.+++++.|++|++||++++.++..
T Consensus 330 S~D~tvklWD~~~~----------------~~~~~~~~~~~~~~v~~v~f-sp~~~~l~s~~~d~tv~lwd~~~~~~~~~ 392 (524)
T 2j04_B 330 AVDGYFYIFNPKDI----------------ATTKTTVSRFRGSNLVPVVY-CPQIYSYIYSDGASSLRAVPSRAAFAVHP 392 (524)
T ss_dssp ETTSEEEEECGGGH----------------HHHCEEEEECSCCSCCCEEE-ETTTTEEEEECSSSEEEEEETTCTTCCEE
T ss_pred ccCCeEEEEECCCC----------------CcccccccccccCcccceEe-CCCcCeEEEeCCCCcEEEEECccccccee
Confidence 4999999999876 56666766653223788997 99999999999999999999999998888
Q ss_pred EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
+.+|.+.|++++|+|++++|++|+.|++|++|++....+
T Consensus 393 l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~ 431 (524)
T 2j04_B 393 LVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL 431 (524)
T ss_dssp EEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT
T ss_pred eecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc
Confidence 999999999999999999999999999999999866533
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-30 Score=220.05 Aligned_cols=210 Identities=10% Similarity=0.036 Sum_probs=166.4
Q ss_pred ccceeEEEEcCC-----CCcEEEEeeCCCcEEEEEccCCcccCC--cCCCCCcccccccccCCCCCcceEEEEEecCCCE
Q 023246 3 SIRLNAIVIDPR-----NPNYFAVGGSDEYARVYDIRKCHWYSP--ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 75 (285)
Q Consensus 3 ~~~v~~~~~s~~-----~~~~l~tg~~dg~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~ 75 (285)
.+.|++++|+|+ ++.+||+|+.||+|+|||+.+++.... .... .+...+.+|...|++++|++++ .
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~------~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE------KPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC------SCSEEECCTTTCEEEEEESSSS-E
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec------CceEEEEcCCCCEEEEEecCCC-e
Confidence 357999999996 136999999999999999987642100 0001 1112236899999999999865 6
Q ss_pred EEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEE-EecCCC-cEEEEecCCCeEEEEecCC
Q 023246 76 LISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVN-FFGPND-EYVMSGSDCGHLFIWKKKG 152 (285)
Q Consensus 76 l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~-~~l~~~~~dg~v~vwd~~~ 152 (285)
|++| .||+|++||+.++. .....+.+|... |.+++ .+++++ ++|++++.|++|++||+++
T Consensus 280 lasgs~DgtV~lWD~~~~~---------------~~~~~~~~H~~~--V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPE---------------VPSFYDQVHDSY--ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEEEETTSEEEEEETTBCS---------------SCSEEEECSSSC--EEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEEEeCCCEEEEEECCCCC---------------CceEEeeccccc--EEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 7775 59999999998651 344568889877 99993 248887 8999999999999999998
Q ss_pred CceEEEEecccc--cceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeE
Q 023246 153 GKLVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIM 229 (285)
Q Consensus 153 ~~~~~~~~~h~~--~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i 229 (285)
++++..+.+|.. .|.+++|+|+++.+++++.|++|++||++.... ..+.+|...+..+.+ ++++..+++++.|++|
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~-Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV-SRLHPMVLAGSADGSL 421 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC-CSSCCBCEEEETTTEE
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe-CCCCCeEEEEECCCEE
Confidence 887777777753 588999999999999999999999999987764 567778888887766 5667789999999999
Q ss_pred EEEEeccc
Q 023246 230 HVLRLQRR 237 (285)
Q Consensus 230 ~vwd~~~~ 237 (285)
++||+..+
T Consensus 422 ~lwd~~~~ 429 (524)
T 2j04_B 422 IITNAARR 429 (524)
T ss_dssp ECCBSCSS
T ss_pred EEEechHh
Confidence 99997654
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=3.5e-29 Score=210.83 Aligned_cols=245 Identities=13% Similarity=0.144 Sum_probs=186.8
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec--CCCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~--~~~~l~s~ 79 (285)
+..+|++++|+|++ +|++|+.||+|++||+.+++ +...+ .+|...|.+++|++ ++.+++++
T Consensus 161 h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~--------------~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 161 HDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGC--------------CTHVF-EGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp CSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTE--------------EEEEE-CCCSSCEEEEEEEESSSCEEEEEE
T ss_pred CCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCc--------------EEEEE-CCCCCccEEEEEecCCCCCEEEEE
Confidence 35789999999964 99999999999999999886 33333 68999999999995 66788885
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCC-------ccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSP-------EDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 151 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~ 151 (285)
.|+.|++||+............. ...........+.+|... +.++ +++++++++++.||.|++||++
T Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~---~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS--VRTV---SGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC--EEEE---EEETTEEEEEETTSCEEEEETT
T ss_pred cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce--EEEE---cCCCCEEEEEeCCCeEEEEECC
Confidence 59999999998763111000000 000011124556677755 6665 4578999999999999999999
Q ss_pred CCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEE
Q 023246 152 GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMH 230 (285)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 230 (285)
+++++..+.+|...|.+++|+|+++++++++.|+.|++||+++++ +..+.+|...+..+.+. +.++++++.|+.|+
T Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 299 QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIR 375 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEE
T ss_pred CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999999999998775 46677788877766553 46899999999999
Q ss_pred EEEecccccceeE---------eeeccccccCCCCCcCeEEEeecCCCCCC
Q 023246 231 VLRLQRRQTLAYR---------ERRYNAADFESDEEEGETYLLGFSDSDAS 272 (285)
Q Consensus 231 vwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 272 (285)
+||+.+....... .+.+++..+..+. ++.+.++++..++.-
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 9999876544333 3444555555555 678999998877543
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=9.7e-29 Score=204.22 Aligned_cols=213 Identities=16% Similarity=0.249 Sum_probs=164.4
Q ss_pred CccceeEEEEcC-CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEe
Q 023246 2 NSIRLNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~-~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~ 79 (285)
++.+|++++|+| ++ .+|++|+.||.|++||+.+++.......... .. .......+|...|.+++|+| ++.+|+++
T Consensus 42 h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 42 HGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSYYTCKAV-CS-IGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSCEEECEE-EE-ECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred cCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccceEecccc-cc-ccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 467999999999 75 8999999999999999998764322211000 00 00111246999999999999 66788885
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC---CCcEEEEecCCCeEEEEecCCCce
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP---NDEYVMSGSDCGHLFIWKKKGGKL 155 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~dg~v~vwd~~~~~~ 155 (285)
.|+.|++||+.++ +....+. +... +.++.+ .+ ++.++++++.++.|++||+++++.
T Consensus 119 ~~d~~i~iwd~~~~----------------~~~~~~~-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 119 SFDKTLKVWDTNTL----------------QTADVFN-FEET--VYSHHM-SPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp ETTSEEEEEETTTT----------------EEEEEEE-CSSC--EEEEEE-CSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred eCCCeEEEeeCCCC----------------ccceecc-CCCc--eeeeEe-ecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 5999999999877 4555555 4433 788886 66 455999999999999999999999
Q ss_pred EEEEecccccceEeEEcCCCCe-EEEEecCCcEEEEcCCCCC--CC---------------CCCCCcccceeeccccCCC
Q 023246 156 VRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTD--FP---------------PLPDNAEKIMKANKQGRED 217 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~ 217 (285)
+..+..|...|.+++|+|++++ |++++.||.|++||++... +. ....|...+..+.+ .+++
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~ 257 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF-TSDG 257 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE-CTTS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE-cCCC
Confidence 9999999999999999999995 8999999999999996543 11 12345666665554 4567
Q ss_pred ceEEEeCCCCeEEEEEecccc
Q 023246 218 HSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 218 ~~~~~~s~d~~i~vwd~~~~~ 238 (285)
.++++++.|+.|++||+.+.+
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCC
T ss_pred CEEEEecCCCeEEEEECCCCc
Confidence 789999999999999987643
No 71
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.3e-30 Score=210.64 Aligned_cols=201 Identities=11% Similarity=0.058 Sum_probs=154.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|++++|+|++ .+|++|+.|++|++||+.+++.. .......+|...|.+++|+|++++|+++ .|
T Consensus 55 ~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 55 DKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTW------------KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp SSCEEEEEECTTT-CCEEEEETTSSEEEC------CC------------CCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred CceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCce------------eeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 5689999999985 89999999999999999877510 1222236799999999999999988885 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec-ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC---------
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK--------- 151 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~--------- 151 (285)
+.|++||+.... .......+.. |... |.+++| +|+++++++++.|+.|++||++
T Consensus 122 ~~i~iwd~~~~~-------------~~~~~~~~~~~h~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 185 (377)
T 3dwl_C 122 RVISVCYFEQEN-------------DWWVSKHLKRPLRST--ILSLDW-HPNNVLLAAGCADRKAYVLSAYVRDVDAKPE 185 (377)
T ss_dssp SCEEECCC------------------CCCCEEECSSCCSC--EEEEEE-CTTSSEEEEEESSSCEEEEEECCSSCC-CCC
T ss_pred CeEEEEEECCcc-------------cceeeeEeecccCCC--eEEEEE-cCCCCEEEEEeCCCEEEEEEEEecccCCCcc
Confidence 999999998761 1124667776 7766 999997 9999999999999999999985
Q ss_pred ---------CCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-----CCCCCCCcccceeeccccCCC
Q 023246 152 ---------GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQGRED 217 (285)
Q Consensus 152 ---------~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 217 (285)
.++++..+ .|...|.+++|+|++++|++++.|+.|++||++.+. +..+..|...+..+.+ .+++
T Consensus 186 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~ 263 (377)
T 3dwl_C 186 ASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLW-ANES 263 (377)
T ss_dssp SCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEE-EETT
T ss_pred ccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEE-cCCC
Confidence 34556666 899999999999999999999999999999998765 4566677777776655 4556
Q ss_pred ceEEEeCCCCeEEEEEec
Q 023246 218 HSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 218 ~~~~~~s~d~~i~vwd~~ 235 (285)
.++++++.++.+ +|+..
T Consensus 264 ~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 264 AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEEEESSSSEE-EECCC
T ss_pred CEEEEEcCCcEE-EEEeC
Confidence 778888766665 77655
No 72
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.2e-30 Score=226.78 Aligned_cols=237 Identities=14% Similarity=0.141 Sum_probs=189.5
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s~ 79 (285)
+.++|++++|+|++ .+|++|+.||+|+|||+..+.. .....+.+|..+|++++|+|+ +++|+++
T Consensus 8 H~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~-------------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 8 HNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-------------KLIDTLTGHEGPVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCTTSCSEEEEE
T ss_pred CcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-------------ccceeccCCcCceEEEEecCCCCCCEEEEE
Confidence 46789999999986 8999999999999999984431 122223789999999999988 8888886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC--CcEEEEecCCCeEEEEecCCCc--
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN--DEYVMSGSDCGHLFIWKKKGGK-- 154 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~-- 154 (285)
.||.|++||+.++. ......+..|... |.+++| +|+ ++++++|+.||.|++||++++.
T Consensus 74 s~Dg~I~vwd~~~~~--------------~~~~~~~~~h~~~--V~~v~~-sp~~~~~~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 74 SYDGKVLIWKEENGR--------------WSQIAVHAVHSAS--VNSVQW-APHEYGPLLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp ETTSCEEEEEEETTE--------------EEEEEEECCCSSC--EEEEEE-CCGGGCSEEEEEETTSEEEEEECCSSSCC
T ss_pred eCCCeEEEEECCCCc--------------ccccccccCCCCC--eEEEEE-CCCCCCCEEEEEeCCCcEEEEEeecCCCc
Confidence 59999999998760 0155667778866 999997 998 9999999999999999998773
Q ss_pred eEEEEecccccceEeEEcC-------------CCCeEEEEecCCcEEEEcCCCCC-----CCCCCCCcccceeeccccCC
Q 023246 155 LVRLMVGDRHVVNQLEPHP-------------HIPMFATCGIEKTVKLWAPMPTD-----FPPLPDNAEKIMKANKQGRE 216 (285)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~p-------------~~~~l~t~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~ 216 (285)
....+.+|...|.+++|+| ++.++++++.||.|++||++... ...+.+|...+..+.+....
T Consensus 137 ~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC
Confidence 4456678999999999999 58899999999999999997653 24566788888777664433
Q ss_pred --CceEEEeCCCCeEEEEEeccccc---------------ceeEeeeccccccCCCCCcCeEEEeecCCC
Q 023246 217 --DHSRITLTPDVIMHVLRLQRRQT---------------LAYRERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 217 --~~~~~~~s~d~~i~vwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
+.++++++.||.|++||+...+. +..+.+.+++..+.....+|.|+++++..+
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 78999999999999999987531 112356667777777777888988887743
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.3e-29 Score=207.17 Aligned_cols=222 Identities=13% Similarity=0.026 Sum_probs=172.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|.+++|+|++ .+|++|+.|+.|++||+..++... ........|...|.+++|+|++++|+++ .|
T Consensus 96 ~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 96 NRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWW-----------VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEE-----------EEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcce-----------eeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 4679999999975 899999999999999998765110 1223336789999999999999998886 59
Q ss_pred CcEEEEEcCCCCCCCCCCC--CCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSL--SPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
+.|++||+........... ........+.+..+..|... +.+++| +|+++++++++.|+.|++||+++++++..+
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW--VHGVCF-SANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC--EEEEEE-CSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCe--EEEEEE-CCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 9999999753311000000 00011223566777777766 999997 999999999999999999999999999999
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCC--CC--------------------------------C-------C
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP--TD--------------------------------F-------P 198 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~--~~--------------------------------~-------~ 198 (285)
..|...|.+++|+|++.+++++ .|+.|++|+++. +. . .
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA 319 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------C
T ss_pred ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccc
Confidence 9999999999999999888877 899999999876 31 0 2
Q ss_pred CC-CCCcccceeeccccCCC---ceEEEeCCCCeEEEEEecccccc
Q 023246 199 PL-PDNAEKIMKANKQGRED---HSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 199 ~~-~~~~~~~~~~~~~~~~~---~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
.+ .+|...+..+.+...++ .++++++.||.|++|++++.+.+
T Consensus 320 ~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 320 GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp CCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred cccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 22 36788887777655655 79999999999999999876543
No 74
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=211.43 Aligned_cols=238 Identities=12% Similarity=0.063 Sum_probs=167.1
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCC-------c--CCCCCcccc------cccccCCCCCcceEEEE
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSP-------I--SSDTPVDTF------CPRHLIGKNNIHITGLA 68 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~-------~--~~~~~~~~~------~~~~~~~~h~~~v~~i~ 68 (285)
..|.+++|+||| .++|+++.|++|+ |...++.+.. . ...+....+ ....+...|...|.+++
T Consensus 16 ~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 16 DWKNNLTWARDG-TLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSCCEEECTTS-CEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred ccEEEEEECCCC-CEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 578999999986 9999999999998 7655543310 0 000001111 11122125688999999
Q ss_pred EecCCCEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC---ceeeeeEEEecCCCcEEEEecCCCe
Q 023246 69 YSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMSGSDCGH 144 (285)
Q Consensus 69 ~s~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~~~~dg~ 144 (285)
|||+|++||++ .||.|++|+.. ..+..+. |.. ...+.+++| +|+|++|++|+.||+
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~------------------~~l~~l~-~~~~~~~~sv~svaf-SPDG~~LAsgs~DGt 152 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDN------------------KMLTNLD-SKGNLSSRTYHCFEW-NPIESSIVVGNEDGE 152 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETT------------------EEEEECC-CSSCSTTTCEEEEEE-CSSSSCEEEEETTSE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCC------------------ceeeecc-CCCccccccEEEEEE-cCCCCEEEEEcCCCE
Confidence 99999999995 59999999953 2444444 442 123899997 999999999999999
Q ss_pred EEEEecCCCce-------EEEE----ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCC----C-CCCcccce
Q 023246 145 LFIWKKKGGKL-------VRLM----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP----L-PDNAEKIM 208 (285)
Q Consensus 145 v~vwd~~~~~~-------~~~~----~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~----~-~~~~~~~~ 208 (285)
|++||+.++.. +.++ .+|...|.+++|+|++ +++++.|++|++|++.+....+ + .+|...+.
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 99999998753 6776 5677899999999999 8889999999999998877532 4 35666777
Q ss_pred eeccccCCCceEEEeCCCCeEEEEEecccccceeE-eeeccccccCC-CCCcCeEEEeecCCCC
Q 023246 209 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR-ERRYNAADFES-DEEEGETYLLGFSDSD 270 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 270 (285)
.+.+. +..+++++ ++.|++||+..++..... .+......++. +++++...++.+++|.
T Consensus 231 svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 231 DLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred EEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 77664 35777776 699999999887663322 33322333333 2344445555555543
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.8e-29 Score=205.78 Aligned_cols=227 Identities=12% Similarity=0.120 Sum_probs=181.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~ 83 (285)
.+.+++|++ ..+++++.|+.|++||+.+++ ........|...|++++|+|++++|+++ .|+.
T Consensus 95 ~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~--------------~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 95 YLNLLDWSN---LNVVAVALERNVYVWNADSGS--------------VSALAETDESTYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp TCBCEEECT---TSEEEEEETTEEEEEETTTCC--------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEeecC---CCEEEEECCCeEEEeeCCCCc--------------EeEeeecCCCCCEEEEEECCCCCEEEEECCCCe
Confidence 355678877 346778899999999999886 2233324588999999999999999886 5999
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC-CCceEEEEecc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK-GGKLVRLMVGD 162 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~h 162 (285)
|++||+.++ +.+..+.+|... |.+++| +++++++++.||.|++||++ ....+..+.+|
T Consensus 158 i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 158 VDIYDVESQ----------------TKLRTMAGHQAR--VGCLSW---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp EEEEETTTC----------------CEEEEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEEECcCC----------------eEEEEecCCCCc--eEEEEE---CCCEEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 999999887 678888888876 999996 46799999999999999998 56678888999
Q ss_pred cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeC--CCCeEEEEEeccccc
Q 023246 163 RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLT--PDVIMHVLRLQRRQT 239 (285)
Q Consensus 163 ~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s--~d~~i~vwd~~~~~~ 239 (285)
.+.|.+++|+|++++|++++.|+.|++||++.+.. ..+..|...+..+.+......++++++ .|+.|++||+.+++.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 99999999999999999999999999999987653 456667777877777555566777765 799999999988766
Q ss_pred ceeE---------eeeccccccCC--CCCcCeEEEeecCCC
Q 023246 240 LAYR---------ERRYNAADFES--DEEEGETYLLGFSDS 269 (285)
Q Consensus 240 ~~~~---------~~~~~~~~~~~--~~~~~~v~~~~~~~~ 269 (285)
+..+ .+.+++..+.. +..++.+.+++...+
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 5544 34455555555 445667777776553
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-29 Score=207.22 Aligned_cols=241 Identities=16% Similarity=0.255 Sum_probs=178.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEc----cCCcc------cCCcCCCCCcccccccccCCCCCcceEEEEEecC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDI----RKCHW------YSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT 72 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~----~~~~~------~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~ 72 (285)
..+|++++|+|++..+||+|+.||.|++|++ .+++. ...+.. .+.......+|...|++++|+|+
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH-----PFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC-----CCCCC------CBCEEEEEECTT
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc-----cccccccccCCCCceEEEEEcCC
Confidence 3689999999986339999999999999999 76652 111000 00001111347889999999999
Q ss_pred CCEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC
Q 023246 73 SELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 151 (285)
Q Consensus 73 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~ 151 (285)
+++|+++ .|+.|++|+. .+ +.+..+..|... |.+++| +|+++++++++.|+.|++||+.
T Consensus 120 ~~~l~~~~~dg~i~i~~~-~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWNK-TG----------------ALLNVLNFHRAP--IVSVKW-NKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp SSEEEEEETTSCEEEEET-TS----------------CEEEEECCCCSC--EEEEEE-CTTSSEEEEEETTCCEEEEETT
T ss_pred CCEEEEEeCCCeEEEEeC-CC----------------CeeeeccCCCcc--EEEEEE-CCCCCEEEEEecCCeEEEEECC
Confidence 9999886 5999999994 33 577788888866 999997 9999999999999999999998
Q ss_pred CCceEE--------------------------------------------------------EEecccccceEeEEcCCC
Q 023246 152 GGKLVR--------------------------------------------------------LMVGDRHVVNQLEPHPHI 175 (285)
Q Consensus 152 ~~~~~~--------------------------------------------------------~~~~h~~~v~~~~~~p~~ 175 (285)
+++.+. .+..|...|.+++|+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN 259 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC
Confidence 766543 233567789999999999
Q ss_pred CeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE----------e
Q 023246 176 PMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR----------E 244 (285)
Q Consensus 176 ~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~----------~ 244 (285)
++|++++.|+.|++||++... ...+..|...+..+.+.. ++ .+++++.|+.|++||+++.+.+..+ .
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 337 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGR 337 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEE
Confidence 999999999999999998765 355666777777666543 33 8999999999999999876554433 3
Q ss_pred eeccccccCCCCCcCeEEEeecCCCC
Q 023246 245 RRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
+.+++..+.....++.+.++++..+.
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCc
Confidence 45555566666666777777765443
No 77
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=210.75 Aligned_cols=214 Identities=10% Similarity=0.162 Sum_probs=167.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
..+|.+++|+|++ .+|++++.|+.|++||+.+++....+.................+...+.+++|+|++.+++.+.++
T Consensus 149 ~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 227 (425)
T 1r5m_A 149 RAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG 227 (425)
T ss_dssp CSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG
T ss_pred CccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC
Confidence 5689999999975 899999999999999999886433222111000000000001112228899999997766667899
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecc
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD 162 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h 162 (285)
.|++||+... +.+..+..|... |.+++| +|+++++++++.|+.|++||+++++.+..+..|
T Consensus 228 ~i~~~d~~~~----------------~~~~~~~~~~~~--i~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 288 (425)
T 1r5m_A 228 AIFVYQITEK----------------TPTGKLIGHHGP--ISVLEF-NDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH 288 (425)
T ss_dssp CEEEEETTCS----------------SCSEEECCCSSC--EEEEEE-ETTTTEEEEEETTSCEEEECSSSBSCSEEECCC
T ss_pred eEEEEEcCCC----------------ceeeeeccCCCc--eEEEEE-CCCCCEEEEEcCCCEEEEEECCCCccceEecCC
Confidence 9999999887 677888888866 999997 999999999999999999999999999999999
Q ss_pred cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 163 RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 163 ~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
...|.+++|+|++ ++++++.|+.|++||++.+.. ..+..+...+..+.+ .+++.++++++.|+.|++||+...+
T Consensus 289 ~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 289 SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRI-SQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEE-CTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEE-cCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999999999999 999999999999999987653 445556666655544 4567789999999999999998776
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3e-29 Score=206.91 Aligned_cols=212 Identities=9% Similarity=0.060 Sum_probs=167.1
Q ss_pred CccceeEEEEcCC---CC---cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCC-----CcceEEEEEe
Q 023246 2 NSIRLNAIVIDPR---NP---NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-----NIHITGLAYS 70 (285)
Q Consensus 2 ~~~~v~~~~~s~~---~~---~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~i~~s 70 (285)
...+|++++|+|+ ++ .+|++++.||.|++||+.+++.... .....+ ..| ...|.+++|+
T Consensus 61 h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 61 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK---------VIFEKL-DLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC---------EEEEEE-CCSCTTGGGSCEEEEEEE
T ss_pred CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc---------ccceee-cccccccCCCcEEEEEEe
Confidence 3568999999995 25 7999999999999999997762000 002222 556 5899999999
Q ss_pred ----cCCCE-EEEe-cCCcEEEEEcCC------CCCCCCCCCCCccccCCCCce-----Eeec-------ccCceeeeeE
Q 023246 71 ----NTSEL-LISY-NDELVYLFEKNM------GLGPSPLSLSPEDLQKREEPQ-----VYSG-------HRNSQTVKGV 126 (285)
Q Consensus 71 ----~~~~~-l~s~-~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~-----~~~~-------~~~~~~i~~~ 126 (285)
|++.+ |+++ .|+.|++||+.. . +.+. .+.+ |... +.++
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~--i~~~ 192 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS----------------LTLNWSPTLELQGTVESPMTPSQF--ATSV 192 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHH----------------TTTCCCCEEEEEEEECCSSSSCCC--CCEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCcccccccc----------------ceeeccCcceeeeeeccccCCCCC--ceEE
Confidence 99998 8886 599999999987 4 3333 5643 5544 9999
Q ss_pred EEecCCCcEEEEecCCCeEEEEecCCCceEEEEec---c---cccceEeEEcCCCCeEEEEecC---CcEEEEcCCCCC-
Q 023246 127 NFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG---D---RHVVNQLEPHPHIPMFATCGIE---KTVKLWAPMPTD- 196 (285)
Q Consensus 127 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---h---~~~v~~~~~~p~~~~l~t~~~d---~~i~iwd~~~~~- 196 (285)
+| +|++ ++++++.||.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||++..+
T Consensus 193 ~~-~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 193 DI-SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER 270 (397)
T ss_dssp EE-CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred EE-CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc
Confidence 97 9999 999999999999999999999999998 9 9999999999999999999999 999999998776
Q ss_pred CCCCCC-------------CcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 197 FPPLPD-------------NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 197 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
+..+.. |...+..+.+ .+++.++++++.|+.|++||+.+.+.+..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 271 IGSLSVPTHSSQASLGEFAHSSWVMSLSF-NDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEECBC--------CCBSBSSCEEEEEE-CSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cceeccCcccccccccccccCCcEEEEEE-CCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 344555 6666666655 4567789999999999999998776655544
No 79
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=211.93 Aligned_cols=218 Identities=14% Similarity=0.170 Sum_probs=163.2
Q ss_pred cceeEEEEcCCCC-cEEEEeeCCCcEEEEEccCCcccCC---cC-------CCCCccccc---------------ccccC
Q 023246 4 IRLNAIVIDPRNP-NYFAVGGSDEYARVYDIRKCHWYSP---IS-------SDTPVDTFC---------------PRHLI 57 (285)
Q Consensus 4 ~~v~~~~~s~~~~-~~l~tg~~dg~v~iwd~~~~~~~~~---~~-------~~~~~~~~~---------------~~~~~ 57 (285)
.+|++++|+|++. .+|++++.|++|++||+.+++.... .. ....+..+. ...+.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 6799999999743 6899999999999999986442100 00 000000000 11224
Q ss_pred CCCCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCce-------EeecccCceeeeeEEEec
Q 023246 58 GKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQ-------VYSGHRNSQTVKGVNFFG 130 (285)
Q Consensus 58 ~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~ 130 (285)
.+|...|++++|+|++++|+++.|+.|++||+.... +... .+..|... |.+++| +
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~---------------~~~~~~~~~~~~~~~~~~~--v~~~~~-~ 235 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITD---------------RSFNIVDIKPANMEELTEV--ITAAEF-H 235 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEE---------------EEEEEEECCCSSGGGCCCC--EEEEEE-C
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCC---------------ceeeeeecccccccccCcc--eEEEEE-C
Confidence 689999999999999999999899999999998431 2222 24567765 999997 9
Q ss_pred CCC-cEEEEecCCCeEEEEecCCCce----EEEEecccc------------cceEeEEcCCCCeEEEEecCCcEEEEcCC
Q 023246 131 PND-EYVMSGSDCGHLFIWKKKGGKL----VRLMVGDRH------------VVNQLEPHPHIPMFATCGIEKTVKLWAPM 193 (285)
Q Consensus 131 ~~~-~~l~~~~~dg~v~vwd~~~~~~----~~~~~~h~~------------~v~~~~~~p~~~~l~t~~~d~~i~iwd~~ 193 (285)
|++ +++++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++||++
T Consensus 236 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 236 PNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred CCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 998 9999999999999999998887 788888876 8999999999999999998 999999997
Q ss_pred C-CC-CCCCCCCccccee--------------eccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 194 P-TD-FPPLPDNAEKIMK--------------ANKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 194 ~-~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
. +. +..+..|...... ...+.+++.++++++.|+.|++||+.+++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 315 MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 5 44 4555555432110 0223556778999999999999999887654
No 80
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=1.8e-29 Score=208.21 Aligned_cols=210 Identities=11% Similarity=0.092 Sum_probs=165.8
Q ss_pred ccceeEEEEc----CCCCcE-EEEeeCCCcEEEEEccC------CcccCCcCCCCCccccc-ccccCCCCCcceEEEEEe
Q 023246 3 SIRLNAIVID----PRNPNY-FAVGGSDEYARVYDIRK------CHWYSPISSDTPVDTFC-PRHLIGKNNIHITGLAYS 70 (285)
Q Consensus 3 ~~~v~~~~~s----~~~~~~-l~tg~~dg~v~iwd~~~------~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~i~~s 70 (285)
...|.+++|+ |++ .+ |++|+.||.|++||+.+ ++..... +...+. .......|...|.+++|+
T Consensus 121 ~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~ 195 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWS----PTLELQGTVESPMTPSQFATSVDIS 195 (397)
T ss_dssp GSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC----CEEEEEEEECCSSSSCCCCCEEEEC
T ss_pred CCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccceeecc----CcceeeeeeccccCCCCCceEEEEC
Confidence 5789999999 975 77 99999999999999997 5422100 000000 000114578899999999
Q ss_pred cCCCEEEEec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec---c---cCceeeeeEEEecCCCcEEEEecCC-
Q 023246 71 NTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG---H---RNSQTVKGVNFFGPNDEYVMSGSDC- 142 (285)
Q Consensus 71 ~~~~~l~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~i~~~~~~~~~~~~l~~~~~d- 142 (285)
|++ +|+++. |+.|++||+.+. +.+..+.. | ... +.+++| +|++++|++++.|
T Consensus 196 ~~~-~l~~~~~dg~i~i~d~~~~----------------~~~~~~~~~~~h~~~~~~--i~~i~~-~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 196 ERG-LIATGFNNGTVQISELSTL----------------RPLYNFESQHSMINNSNS--IRSVKF-SPQGSLLAIAHDSN 255 (397)
T ss_dssp TTS-EEEEECTTSEEEEEETTTT----------------EEEEEEECCC---CCCCC--EEEEEE-CSSTTEEEEEEEET
T ss_pred CCc-eEEEEeCCCcEEEEECCCC----------------ceeEEEeccccccccCCc--cceEEE-CCCCCEEEEEecCC
Confidence 999 888864 999999999877 67788887 7 655 999997 9999999999999
Q ss_pred --CeEEEEecCCCceEEEEec-------------ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCC-----
Q 023246 143 --GHLFIWKKKGGKLVRLMVG-------------DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLP----- 201 (285)
Q Consensus 143 --g~v~vwd~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~----- 201 (285)
+.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+.|++||++..+ +..+.
T Consensus 256 ~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 335 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 335 (397)
T ss_dssp TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGG
T ss_pred CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCc
Confidence 9999999999999999998 99999999999999999999999999999998765 34444
Q ss_pred -CC---------------cccceeeccccCCC---------ceEEEeCCCCeEEEEEeccc
Q 023246 202 -DN---------------AEKIMKANKQGRED---------HSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 202 -~~---------------~~~~~~~~~~~~~~---------~~~~~~s~d~~i~vwd~~~~ 237 (285)
.| ...+..+.+..... .++++++.|+.|++|++.++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 336 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 45 66676666543321 68999999999999999875
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-28 Score=201.12 Aligned_cols=209 Identities=12% Similarity=0.155 Sum_probs=165.7
Q ss_pred CccceeEEEEcCC-CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEE
Q 023246 2 NSIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLIS 78 (285)
Q Consensus 2 ~~~~v~~~~~s~~-~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s 78 (285)
+..+|++++|+|+ ++.+|++|+.||.|++||+.+++. ........|...|.+++|+|+ +.+|++
T Consensus 54 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 120 (379)
T 3jrp_A 54 HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-------------SQIAVHAVHSASVNSVQWAPHEYGPLLLV 120 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce-------------eEeeeecCCCcceEEEEeCCCCCCCEEEE
Confidence 3568999999975 148999999999999999998752 122223678999999999999 888888
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-------------CCcEEEEecCCCe
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-------------NDEYVMSGSDCGH 144 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~l~~~~~dg~ 144 (285)
+ .|+.|++||+.... ......+..|... |.+++| +| +++++++++.||.
T Consensus 121 ~~~d~~i~v~d~~~~~--------------~~~~~~~~~~~~~--v~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 183 (379)
T 3jrp_A 121 ASSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW-APATIEEDGEHNGTKESRKFVTGGADNL 183 (379)
T ss_dssp EETTSEEEEEECCTTS--------------CCCEEEEECCTTC--EEEEEE-CCCC----------CTTCEEEEEETTSC
T ss_pred ecCCCcEEEEecCCCC--------------ceeeEEecCCCCc--eEEEEE-cCccccccccccCCCCCCEEEEEeCCCe
Confidence 5 59999999998751 0233455677766 999997 88 6999999999999
Q ss_pred EEEEecCCCc----eEEEEecccccceEeEEcCC---CCeEEEEecCCcEEEEcCCCCC------CCCCCCCcccceeec
Q 023246 145 LFIWKKKGGK----LVRLMVGDRHVVNQLEPHPH---IPMFATCGIEKTVKLWAPMPTD------FPPLPDNAEKIMKAN 211 (285)
Q Consensus 145 v~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~---~~~l~t~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~ 211 (285)
|++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.||.|++||++... ......+...+..+.
T Consensus 184 i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 263 (379)
T 3jrp_A 184 VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS 263 (379)
T ss_dssp EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE
T ss_pred EEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEE
Confidence 9999998765 44677789999999999999 8999999999999999997753 222333555565554
Q ss_pred cccCCCceEEEeCCCCeEEEEEecccccce
Q 023246 212 KQGREDHSRITLTPDVIMHVLRLQRRQTLA 241 (285)
Q Consensus 212 ~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~ 241 (285)
+ .+++.++++++.||.|++|++.......
T Consensus 264 ~-s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 264 W-SLSGNVLALSGGDNKVTLWKENLEGKWE 292 (379)
T ss_dssp E-CSSSCCEEEEESSSSEEEEEEEETTEEE
T ss_pred E-cCCCCEEEEecCCCcEEEEeCCCCCccc
Confidence 4 5667789999999999999998654433
No 82
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7e-29 Score=200.49 Aligned_cols=216 Identities=11% Similarity=0.116 Sum_probs=166.3
Q ss_pred CccceeEEEEcCC-CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEE
Q 023246 2 NSIRLNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLIS 78 (285)
Q Consensus 2 ~~~~v~~~~~s~~-~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s 78 (285)
+..+|++++|+|. ++.+|++|+.||+|++||+.+++...... .+........|...|.+++|+|+ +.+|++
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 129 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR------RWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC 129 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC------SEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc------CcceeeeecccCCceeEEEEcCCCCCcEEEE
Confidence 3568999999994 24899999999999999998775321100 00112223689999999999999 888888
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEee-------------cccCceeeeeEEEecCC---CcEEEEecC
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-------------GHRNSQTVKGVNFFGPN---DEYVMSGSD 141 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~---~~~l~~~~~ 141 (285)
+ .|+.|++||+.+.. .+..+. .+... +.+++| +|+ +.++++++.
T Consensus 130 ~~~dg~v~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~p~~~~~~~l~~~~~ 190 (351)
T 3f3f_A 130 LGNDGILRLYDALEPS----------------DLRSWTLTSEMKVLSIPPANHLQS--DFCLSW-CPSRFSPEKLAVSAL 190 (351)
T ss_dssp EETTCEEEEEECSSTT----------------CTTCCEEEEEEESCSCCCSSCSCC--CEEEEE-CCCSSSCCEEEEEET
T ss_pred ecCCCcEEEecCCChH----------------HhccccccccccccccccCCcccc--eeEEEe-ccCCCCCcEEEEecC
Confidence 5 59999999998762 222211 34433 899997 886 899999999
Q ss_pred CCeEEEEecCCCce--EEEEecccccceEeEEcCCC----CeEEEEecCCcEEEEcCCCCC-------------------
Q 023246 142 CGHLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHI----PMFATCGIEKTVKLWAPMPTD------------------- 196 (285)
Q Consensus 142 dg~v~vwd~~~~~~--~~~~~~h~~~v~~~~~~p~~----~~l~t~~~d~~i~iwd~~~~~------------------- 196 (285)
++.+.+|+...++. +..+.+|...|.+++|+|++ ++|++++.||.|++||++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 270 (351)
T 3f3f_A 191 EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSA 270 (351)
T ss_dssp TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------
T ss_pred CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCc
Confidence 99998888887765 67778899999999999998 789999999999999986531
Q ss_pred ----------------------------CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 197 ----------------------------FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 197 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
+..+.+|...+..+.+ .+++.++++++.|+.|++|++...+.+..+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 271 DVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW-NLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp --------------------CCSEEEEEEEEECTTSSCEEEEEE-CSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccccccccccccccceeeeecccccccEEEEEecccccEEEEEE-cCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 2234456666666655 456678999999999999999987665444
No 83
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.6e-29 Score=208.44 Aligned_cols=220 Identities=9% Similarity=0.048 Sum_probs=168.5
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCc---ccCCcCCCCCc--------------------------------
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH---WYSPISSDTPV-------------------------------- 48 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~---~~~~~~~~~~~-------------------------------- 48 (285)
.++.+++|+|++ .+|+++ .++.|++||+.+++ .+..+......
T Consensus 5 ~p~~~v~~s~dg-~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDG-SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSS-SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCC-CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 588999999986 666555 57899999999887 43333211100
Q ss_pred -------ccccccccCCCCCcceEEEEEecCCCEE-EEe-cCCcEEEEEcC--CCCCCCCCCCCCccccCCCCceEeecc
Q 023246 49 -------DTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKN--MGLGPSPLSLSPEDLQKREEPQVYSGH 117 (285)
Q Consensus 49 -------~~~~~~~~~~~h~~~v~~i~~s~~~~~l-~s~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (285)
...........|...|++++|+|++++| +++ .|+.|++||+. .+ +.+..+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~----------------~~~~~~~~~ 146 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK----------------NVLKLRKRF 146 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS----------------SCEEEEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC----------------ceeeeeecc
Confidence 0000001113567789999999999986 776 49999999998 65 566777644
Q ss_pred cCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE----EEecccccceEeEEcCC---CCeEEEEecCCcEEEE
Q 023246 118 RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR----LMVGDRHVVNQLEPHPH---IPMFATCGIEKTVKLW 190 (285)
Q Consensus 118 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~----~~~~h~~~v~~~~~~p~---~~~l~t~~~d~~i~iw 190 (285)
.....|.+++| +|++++|++++.+|.|++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 147 ~~~~~v~~~~~-sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vw 225 (450)
T 2vdu_B 147 CFSKRPNAISI-AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKIS 225 (450)
T ss_dssp ECSSCEEEEEE-CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEE
T ss_pred cCCCCceEEEE-cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEE
Confidence 33334999997 9999999999999999999998776543 77789999999999999 9999999999999999
Q ss_pred cCCCCCC-CC-CCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 191 APMPTDF-PP-LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 191 d~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
|++.+.. .. +.+|...+..+.+. ++.++++++.|+.|++||+.+++.+..+.
T Consensus 226 d~~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 226 HYPQCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EESCTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 9987764 33 55687877777664 77899999999999999999887655543
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=9.4e-29 Score=230.81 Aligned_cols=229 Identities=15% Similarity=0.229 Sum_probs=183.6
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .+|++|+.||+|++||+.+++ ....+ .+|...|.+++|+|++++|+++ .|
T Consensus 615 ~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~--------------~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 615 TDAVYHACFSQDG-QRIASCGADKTLQVFKAETGE--------------KLLDI-KAHEDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC--------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCC--------------EEEEe-ccCCCCEEEEEEecCCCEEEEEeCC
Confidence 5689999999985 899999999999999999886 33333 6899999999999999999996 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC--CCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP--NDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
+.|++||+.++ +.+..+.+|... |.+++| ++ ++.++++|+.|+.|++||+++++++..+
T Consensus 679 ~~v~vwd~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 679 KKVKIWDSATG----------------KLVHTYDEHSEQ--VNCCHF-TNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp SEEEEEETTTC----------------CEEEEEECCSSC--EEEEEE-CSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred CeEEEEECCCC----------------ceEEEEcCCCCc--EEEEEE-ecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 99999999988 788899999877 999997 77 5668999999999999999999999999
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CC-------------------------C-------------
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PP-------------------------L------------- 200 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~-------------------------~------------- 200 (285)
.+|...|.+++|+|+++++++++.||.|++||++.+.. .. +
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 99999999999999999999999999999999865421 00 0
Q ss_pred -----------------CCCcccceeeccccCCCceEEEeCCCCeEEEEEeccccccee----------EeeeccccccC
Q 023246 201 -----------------PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFE 253 (285)
Q Consensus 201 -----------------~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~----------~~~~~~~~~~~ 253 (285)
.+|...+.... ..+++..+++++.|+.|++||+.++..+.. +.+.+++..+.
T Consensus 820 ~v~~~d~~~~~~~~~~~~~~~~~v~~~~-~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTGHHSTIQYCD-FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp EEEEEETTTCCEEEEEECSSSSCCCEEE-ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cEEEEEecCCCceeEEcCCCCCceEEEE-EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE
Confidence 01222222222 234566888999999999999887654433 34555666666
Q ss_pred CCCCcCeEEEeecC
Q 023246 254 SDEEEGETYLLGFS 267 (285)
Q Consensus 254 ~~~~~~~v~~~~~~ 267 (285)
....++.+.+++..
T Consensus 899 s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 899 TASDDQTIRVWETK 912 (1249)
T ss_dssp EEETTSCEEEEEHH
T ss_pred EEeCCCeEEEEEcc
Confidence 66666777777654
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-28 Score=198.34 Aligned_cols=244 Identities=11% Similarity=0.117 Sum_probs=186.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+...|++++|+|++ .+|++++.||.|++||+.+++. ...+ . |...|.+++|+|++++++++ .
T Consensus 73 h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~--------------~~~~-~-~~~~v~~~~~~~~~~~l~~~~~ 135 (369)
T 3zwl_B 73 HTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQC--------------VATW-K-SPVPVKRVEFSPCGNYFLAILD 135 (369)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCE--------------EEEE-E-CSSCEEEEEECTTSSEEEEEEC
T ss_pred cCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE--------------EEEe-e-cCCCeEEEEEccCCCEEEEecC
Confidence 35689999999975 8999999999999999998863 2222 2 67789999999999988885 4
Q ss_pred C-----CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCC-Cc
Q 023246 81 D-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-GK 154 (285)
Q Consensus 81 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~ 154 (285)
+ +.|++||+....... ............+..+.....+.+++| +|+++++++++.||.|++||+++ ++
T Consensus 136 ~~~~~~g~i~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~ 209 (369)
T 3zwl_B 136 NVMKNPGSINIYEIERDSATH-----ELTKVSEEPIHKIITHEGLDAATVAGW-STKGKYIIAGHKDGKISKYDVSNNYE 209 (369)
T ss_dssp CBTTBCCEEEEEEEEECTTTC-----CEEEECSSCSEEEECCTTCCCEEEEEE-CGGGCEEEEEETTSEEEEEETTTTTE
T ss_pred CccCCCCEEEEEEecCCccce-----eecccccceeeeccCCcCccceeEEEE-cCCCCEEEEEcCCCEEEEEECCCCcE
Confidence 6 999999998662110 000111124455566665334999997 99999999999999999999998 78
Q ss_pred eEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCC-------
Q 023246 155 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV------- 227 (285)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~------- 227 (285)
.+..+..|...|.+++|+|++++|++++.|+.|++||++.........+...+.... ..+.+.++++++.++
T Consensus 210 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3zwl_B 210 YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAV-ITPLKEFIILGGGQEAKDVTTT 288 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE-ECSSSSEEEEEECCC-------
T ss_pred eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEE-ecCCCceEEEeecCCCceEEEE
Confidence 888999999999999999999999999999999999998876432222444444443 355667788888777
Q ss_pred -------eEEEEEeccccccee----------EeeeccccccCCCCCcCeEEEeecCCC
Q 023246 228 -------IMHVLRLQRRQTLAY----------RERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 228 -------~i~vwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
.+++||+...+.+.. +.+.+++..++....++.|.++++..+
T Consensus 289 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 289 SANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred ecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 899999887655443 345666667777777788888887654
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.7e-28 Score=204.80 Aligned_cols=211 Identities=14% Similarity=0.234 Sum_probs=167.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEe-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~-~ 80 (285)
..+|.+++|+|++..+|++|+.||.|++|++.++..... .........+|...|.+++|+| ++.+|+++ .
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR--------VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG--------EEECSEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc--------eeccceeecCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 467899999998745999999999999999987532100 0011223368999999999999 56688775 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCC-CceEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKG-GKLVRL 158 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~-~~~~~~ 158 (285)
|+.|++||++... ..+.+..+..|... |.+++| +|+++ ++++|+.||.|++||+++ .+++..
T Consensus 253 dg~i~i~d~~~~~-------------~~~~~~~~~~~~~~--v~~i~~-~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 253 DQKLMIWDTRNNN-------------TSKPSHTVDAHTAE--VNCLSF-NPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp TSEEEEEETTCSC-------------SSSCSEEEECCSSC--EEEEEE-CSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred CCeEEEEECCCCC-------------CCcceeEeecCCCC--eEEEEe-CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 9999999998651 11356677788866 999997 89887 688999999999999997 567888
Q ss_pred EecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCC---------------CCCCCCCCcccceeeccccCCCceEEE
Q 023246 159 MVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPT---------------DFPPLPDNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
+..|...|.+++|+|+++ +|++++.|+.|++||++.. .+..+.+|...+..+.+......++++
T Consensus 317 ~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 317 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEE
T ss_pred eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEE
Confidence 999999999999999996 5999999999999999752 223455677777777765444448999
Q ss_pred eCCCCeEEEEEeccc
Q 023246 223 LTPDVIMHVLRLQRR 237 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~ 237 (285)
++.|+.|++|++...
T Consensus 397 ~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 397 VSEDNIMQVWQMAEN 411 (430)
T ss_dssp EETTSEEEEEEECHH
T ss_pred EECCCCEEEeEcccc
Confidence 999999999998765
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9e-29 Score=201.56 Aligned_cols=209 Identities=13% Similarity=0.155 Sum_probs=159.7
Q ss_pred CccceeEEEEcCCC--CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 2 NSIRLNAIVIDPRN--PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~--~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
+...|++++|+|++ +.+|++|+.||.|++||+.+... .....+.+|...|++++|+|++++|+++
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-------------TIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-------------EEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-------------eeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 45789999999984 58999999999999999987321 2223336799999999999999999886
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEe-cCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
.|+.|++||+.++ +. ..+..|... |.+++|. +++++++++++.||.|++||+++++.+.
T Consensus 105 ~~dg~v~iwd~~~~----------------~~-~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 105 SCDKTAKMWDLSSN----------------QA-IQIAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM 165 (368)
T ss_dssp ETTSEEEEEETTTT----------------EE-EEEEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE
T ss_pred cCCCcEEEEEcCCC----------------Cc-eeeccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE
Confidence 5999999999876 33 345667766 9999942 7899999999999999999999888766
Q ss_pred EEeccc-----------------------------------------ccceEeEEcCCCCe----EEEEecCCcEEEEcC
Q 023246 158 LMVGDR-----------------------------------------HVVNQLEPHPHIPM----FATCGIEKTVKLWAP 192 (285)
Q Consensus 158 ~~~~h~-----------------------------------------~~v~~~~~~p~~~~----l~t~~~d~~i~iwd~ 192 (285)
.+..|. ..+.++++.++... +++++.|+.|++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 166 VLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred EEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 665432 22344444444433 999999999999999
Q ss_pred CCCC----CCCCCCCcc------------cceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 193 MPTD----FPPLPDNAE------------KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 193 ~~~~----~~~~~~~~~------------~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
+... ...+..|.. .+..+.+ .+++.++++++.||.|++||+.+.+.+..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF-HPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE-CTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEE-ecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 7753 334444444 4555544 556779999999999999999987666554
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-28 Score=198.77 Aligned_cols=236 Identities=8% Similarity=-0.051 Sum_probs=164.3
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec--CCCEEEEe-c
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--TSELLISY-N 80 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~--~~~~l~s~-~ 80 (285)
..|.++.|+|. +++++.|++|++|+.............. .......+|..+|.+++|+| ++++|+++ .
T Consensus 77 ~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 147 (343)
T 3lrv_A 77 PNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNK-----VLREIEVDSANEIIYMYGHNEVNTEYFIWADN 147 (343)
T ss_dssp ECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCC-----EEEEEECCCSSCEEEEECCC---CCEEEEEET
T ss_pred CCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcc-----eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC
Confidence 45677788884 9999999999999876432111111111 12222246778999999999 99999985 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceE-EEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV-RLM 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~ 159 (285)
|++|++||+.++ +....+..+.. ..+.+++| +|+++++++|+.||.|++||+++++.+ ..+
T Consensus 148 dg~i~~wd~~~~----------------~~~~~~~~~~~-~~i~~~~~-~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 148 RGTIGFQSYEDD----------------SQYIVHSAKSD-VEYSSGVL-HKDSLLLALYSPDGILDVYNLSSPDQASSRF 209 (343)
T ss_dssp TCCEEEEESSSS----------------CEEEEECCCSS-CCCCEEEE-CTTSCEEEEECTTSCEEEEESSCTTSCCEEC
T ss_pred CCcEEEEECCCC----------------cEEEEEecCCC-CceEEEEE-CCCCCEEEEEcCCCEEEEEECCCCCCCccEE
Confidence 999999999887 45444433322 23999997 999999999999999999999999987 788
Q ss_pred ec-ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC---Cccccee-eccccCCCceEEEeCC-CCeEEEE
Q 023246 160 VG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD---NAEKIMK-ANKQGREDHSRITLTP-DVIMHVL 232 (285)
Q Consensus 160 ~~-h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~---~~~~~~~-~~~~~~~~~~~~~~s~-d~~i~vw 232 (285)
.. |...|.+++|+|++.+|++++ |+.|++||++.... ..+.. +...+.. ...+.+++.++++++. |+.+++|
T Consensus 210 ~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 210 PVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp CCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEE
Confidence 87 999999999999999999999 55999999987753 33332 2222211 1223456778888887 9999999
Q ss_pred Eeccccccee------Eeeec---cccccCCCCCcCeEEEeecC
Q 023246 233 RLQRRQTLAY------RERRY---NAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 233 d~~~~~~~~~------~~~~~---~~~~~~~~~~~~~v~~~~~~ 267 (285)
++........ +.+.+ +...+.....++.+.++-..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 289 KFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred EEcccccceEecCceeEecCccccccceeEEEecCCceEEEEec
Confidence 9976543222 12232 44455555555556555433
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=5.1e-29 Score=201.40 Aligned_cols=231 Identities=8% Similarity=-0.054 Sum_probs=179.2
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY- 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~- 79 (285)
+...|++++|+|++ .+|++|+.|+.|++|++.+++... ..... .+|...|.+++|+|+++ +|+++
T Consensus 10 h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~-----------~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 10 PKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNV-----------DLLQS-LRYKHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp CSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEE-----------EEEEE-EECSSCEEEEEEEESSSEEEEEEE
T ss_pred CCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCccc-----------cceee-eecCCceEEEEECCCCCcEEEEEc
Confidence 45789999999975 899999999999999998764100 11222 47899999999999999 88886
Q ss_pred cCCcEEEEEc-CCCCCCCCCCCCCccccCCCCceEeec--ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCC----
Q 023246 80 NDELVYLFEK-NMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG---- 152 (285)
Q Consensus 80 ~d~~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~---- 152 (285)
.|+.|++||+ ..+ ....+.. |... |.+++| +| ++++++++.|+.|++||+++
T Consensus 77 ~dg~i~~wd~~~~~-----------------~~~~~~~~~~~~~--v~~l~~-~~-~~~l~s~~~d~~i~iwd~~~~~~~ 135 (342)
T 1yfq_A 77 VQGEILKVDLIGSP-----------------SFQALTNNEANLG--ICRICK-YG-DDKLIAASWDGLIEVIDPRNYGDG 135 (342)
T ss_dssp TTSCEEEECSSSSS-----------------SEEECBSCCCCSC--EEEEEE-ET-TTEEEEEETTSEEEEECHHHHTTB
T ss_pred CCCeEEEEEeccCC-----------------ceEeccccCCCCc--eEEEEe-CC-CCEEEEEcCCCeEEEEcccccccc
Confidence 5999999999 765 4466777 8766 999997 88 99999999999999999987
Q ss_pred -----CceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCC-CCCC---CCCCCcccceeeccccC-CCceEEE
Q 023246 153 -----GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDFP---PLPDNAEKIMKANKQGR-EDHSRIT 222 (285)
Q Consensus 153 -----~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~ 222 (285)
++++..+. |...|.+++|+|++ +++++.|+.|++||++. .... ....+...+..+.+ .+ +..++++
T Consensus 136 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~~~~l~~ 211 (342)
T 1yfq_A 136 VIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL-LPKEQEGYAC 211 (342)
T ss_dssp CEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE-CSGGGCEEEE
T ss_pred cccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE-CCCCCCEEEE
Confidence 66666666 88999999999987 99999999999999987 4421 22334555555544 44 6678999
Q ss_pred eCCCCeEEEEEeccc------ccc-------------------eeEeeeccccccCCCCCcCeEEEeecCCCC
Q 023246 223 LTPDVIMHVLRLQRR------QTL-------------------AYRERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~------~~~-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
++.|+.+++|+++.. +.. ..+.+.+++..+.....++.|++++...+.
T Consensus 212 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 212 SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 999999999999765 222 223445556666666677788888876554
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=1.4e-28 Score=213.75 Aligned_cols=235 Identities=11% Similarity=0.135 Sum_probs=183.4
Q ss_pred ccc-eeEEEEcC--CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 3 SIR-LNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 3 ~~~-v~~~~~s~--~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
... |++++|+| ++ .+|++|+.||.|++||+.+++.... ... .....+..|..+|.+++|+|++++|+++
T Consensus 63 ~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~------~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 63 GSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNS------VEV-NVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp TTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTE------EEE-EEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCccccc------ccc-cccchhhcccccEEEEEEeCCCCEEEEe
Confidence 456 99999999 86 8999999999999999975510000 000 1122226789999999999999998886
Q ss_pred c-C----CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCCC
Q 023246 80 N-D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGG 153 (285)
Q Consensus 80 ~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~ 153 (285)
. + +.|++|| .+ +.+..+.+|... |.+++| +|+++ .+++++.|+.|++||+.++
T Consensus 135 ~~~~~~~~~v~~~d--~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~~l~~~~~d~~v~vwd~~~~ 193 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SG----------------NSLGEVSGHSQR--INACHL-KQSRPMRSMTVGDDGSVVFYQGPPF 193 (615)
T ss_dssp ECCSSCSEEEEETT--TC----------------CEEEECCSCSSC--EEEEEE-CSSSSCEEEEEETTTEEEEEETTTB
T ss_pred ccCCCCccEEEEEE--CC----------------CcceeeecCCcc--EEEEEE-CCCCCcEEEEEeCCCcEEEEeCCCc
Confidence 4 4 6888888 33 467778888876 999997 99987 8999999999999999999
Q ss_pred ceEEEEecccc---cceEeEEcCC-CCeEEEEecCCcEEEEcCCCCCC-CCC-C---CCcccceeeccccCCCceEEEeC
Q 023246 154 KLVRLMVGDRH---VVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTDF-PPL-P---DNAEKIMKANKQGREDHSRITLT 224 (285)
Q Consensus 154 ~~~~~~~~h~~---~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~~~~~s 224 (285)
+.+..+.+|.. .|.+++|+|+ +++|++++.|+.|++||++.++. ..+ . .|...+..+.+. ++.++++++
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~ 271 (615)
T 1pgu_A 194 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVG 271 (615)
T ss_dssp EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEE
T ss_pred ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEc
Confidence 99999999998 9999999999 99999999999999999987764 444 3 677777777665 777899999
Q ss_pred CCCeEEEEEecccccceeEeee-------------ccccccCCCCCcCeEEEeecCC
Q 023246 225 PDVIMHVLRLQRRQTLAYRERR-------------YNAADFESDEEEGETYLLGFSD 268 (285)
Q Consensus 225 ~d~~i~vwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~ 268 (285)
.|+.|++||+.+.+.+..+... ++...+.....++.+++++...
T Consensus 272 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 272 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTE
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCC
Confidence 9999999999987665554332 1333444445556666666543
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-28 Score=205.89 Aligned_cols=197 Identities=12% Similarity=0.111 Sum_probs=154.9
Q ss_pred ceeEEEEcCCCCcE-EEEeeCCCcEEEEEcc--CCcccCCcCCCCCcccccccccC-CCCCcceEEEEEecCCCEEEEe-
Q 023246 5 RLNAIVIDPRNPNY-FAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNTSELLISY- 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~-l~tg~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~s~~~~~l~s~- 79 (285)
.|++++|+|++ .+ +++|+.||.|+|||+. +++. ...+. ..|...|.+++|+|++++|+++
T Consensus 104 ~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~--------------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 104 YIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNV--------------LKLRKRFCFSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp CEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSC--------------EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCce--------------eeeeecccCCCCceEEEEcCCCCEEEEEe
Confidence 69999999987 56 5999999999999998 6652 22221 2567889999999999999886
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCC-CceEeecccCceeeeeEEEecCC---CcEEEEecCCCeEEEEecCCCce
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSGHRNSQTVKGVNFFGPN---DEYVMSGSDCGHLFIWKKKGGKL 155 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~dg~v~vwd~~~~~~ 155 (285)
.++.|++|++.... ... ....+.+|... |.+++| +|+ +++|++++.|+.|++||+++++.
T Consensus 169 ~~g~v~~~~~~~~~-------------~~~~~~~~~~~h~~~--v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~~~~~ 232 (450)
T 2vdu_B 169 KFGDVYSIDINSIP-------------EEKFTQEPILGHVSM--LTDVHL-IKDSDGHQFIITSDRDEHIKISHYPQCFI 232 (450)
T ss_dssp TTSEEEEEETTSCC-------------CSSCCCCCSEECSSC--EEEEEE-EECTTSCEEEEEEETTSCEEEEEESCTTC
T ss_pred CCCcEEEEecCCcc-------------cccccceeeecccCc--eEEEEE-cCCCCCCcEEEEEcCCCcEEEEECCCCce
Confidence 49999999998761 001 23366778766 999997 999 99999999999999999999998
Q ss_pred EEE-EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCC-------------------------cccce
Q 023246 156 VRL-MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDN-------------------------AEKIM 208 (285)
Q Consensus 156 ~~~-~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~-------------------------~~~~~ 208 (285)
+.. +.+|...|.+++|+ ++++|++++.|++|++||+++++. ..+..+ ...+.
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 877 55899999999999 999999999999999999987763 222111 11222
Q ss_pred eeccccCCCceEEEeC-CCCeEEEEEe
Q 023246 209 KANKQGREDHSRITLT-PDVIMHVLRL 234 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s-~d~~i~vwd~ 234 (285)
.+. ..+++.++++++ .++.|++|++
T Consensus 312 ~i~-~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KII-KSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEE-ECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEE-EeCCCCEEEEEECCCCeEEEEEe
Confidence 332 344566777777 8999999999
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=5.8e-28 Score=200.96 Aligned_cols=233 Identities=14% Similarity=0.195 Sum_probs=180.5
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++|+|+|++ .+||+|+.||+|+|||+.+++ ..... .+|...+.+++++ +.+|+++ .|
T Consensus 147 ~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~--------------~~~~~-~~h~~~v~~~s~~--~~~l~sgs~d 208 (420)
T 4gga_A 147 GEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQK--------------RLRNM-TSHSARVGSLSWN--SYILSSGSRS 208 (420)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--------------EEEEE-CCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCc--------------EEEEE-eCCCCceEEEeeC--CCEEEEEeCC
Confidence 3569999999986 899999999999999999886 33333 7899999988775 5688886 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc----eEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK----LVR 157 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~----~~~ 157 (285)
+.+++||..... ..+..+.+|... +..+.+ +++++++++++.|+.+++|+..+++ .+.
T Consensus 209 ~~i~~~d~~~~~---------------~~~~~~~~h~~~--~~~~~~-~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 209 GHIHHHDVRVAE---------------HHVATLSGHSQE--VCGLRW-APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp SEEEEEETTSSS---------------CEEEEEECCSSC--EEEEEE-CTTSSEEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred CceeEeeecccc---------------eeeEEecccccc--eeeeee-cCCCCeeeeeeccccceEEeeccccccceeee
Confidence 999999987652 456778888876 899986 9999999999999999999998765 356
Q ss_pred EEecccccceEeEEcCCCCe-EEE--EecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEE-eCCCCeEEEEE
Q 023246 158 LMVGDRHVVNQLEPHPHIPM-FAT--CGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRIT-LTPDVIMHVLR 233 (285)
Q Consensus 158 ~~~~h~~~v~~~~~~p~~~~-l~t--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~d~~i~vwd 233 (285)
....|...|.+++|+|.+.. +++ |+.|++|++||++++...........+....+......++++ ++.|+.|++||
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWK 350 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEE
Confidence 67789999999999997665 444 457999999999887643322234445555554333333332 45799999999
Q ss_pred ecccccceeE----------eeeccccccCCCCCcCeEEEeecCCCCC
Q 023246 234 LQRRQTLAYR----------ERRYNAADFESDEEEGETYLLGFSDSDA 271 (285)
Q Consensus 234 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 271 (285)
+.+.+.+..+ .++|++..+++...++.|.++++.+.+.
T Consensus 351 ~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 351 YPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence 9887655443 5677888888888889999998766543
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-28 Score=192.11 Aligned_cols=228 Identities=17% Similarity=0.200 Sum_probs=176.8
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+..+|++++| |++ .+|++|+.||.|++||+.+++ .... ...|...|.+++|+|++++|+++ .
T Consensus 17 h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~--------------~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 17 HDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW--------------LGTV-VYTGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp CSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE--------------EEEE-EEECSSCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE--------------EEEE-eecCCccEEEEEECCCCCEEEEecC
Confidence 4578999999 865 899999999999999998765 2222 26788999999999999999885 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
|+.|++|++.... ..+....+..|... |.+++| +++++++++.||.|++|| .++.+..+.
T Consensus 80 dg~i~~~~~~~~~-------------~~~~~~~~~~~~~~--i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~ 139 (313)
T 3odt_A 80 DTMINGVPLFATS-------------GEDPLYTLIGHQGN--VCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQ 139 (313)
T ss_dssp TSCEEEEETTCCT-------------TSCC-CEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEE
T ss_pred CCeEEEEEeeecC-------------CCCcccchhhcccC--EEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecc
Confidence 9999999997641 12456777788866 999986 477999999999999999 678888899
Q ss_pred cccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCCCCCCC-CcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 161 GDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 161 ~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
.|...+.+++|+| ++.++++++.|+.|++||... ....+.. +...+..+.+ .+++. +++++.|+.|++||+++.+
T Consensus 140 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~i~~~~~-~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 140 AHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-VIKTFSGIHNDVVRHLAV-VDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-EEEEECSSCSSCEEEEEE-EETTE-EEEEETTSEEEEEETTTCC
T ss_pred cCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-eEEEEeccCcccEEEEEE-cCCCe-EEEccCCCeEEEEECCchh
Confidence 9999999999988 899999999999999999432 2233333 5555555544 33334 8999999999999998776
Q ss_pred cceeE----------eeeccccccCCCCCcCeEEEeecCCCC
Q 023246 239 TLAYR----------ERRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 239 ~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
.+..+ .+.+++ .+.....++.+++++...+.
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 217 VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence 55444 234444 45566667788888876653
No 94
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-28 Score=206.41 Aligned_cols=216 Identities=14% Similarity=0.161 Sum_probs=163.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEcc---CCcccCCcCCCCCcccccccccCCCCCcceEEEE--EecCCCEEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIR---KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLA--YSNTSELLI 77 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--~s~~~~~l~ 77 (285)
..+|++++|+|++ .+|++|+.||+|++||+. +++........ .+..+... ..++...+.++. +++++.+|+
T Consensus 111 ~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 111 SSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-CIRKINLK--NFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-EEEEEEGG--GGSSCCCEEEEEEEECSSCEEEE
T ss_pred CCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccccc-eeEEEEcc--CcccccCceEEEEEEcCCCCEEE
Confidence 5689999999975 899999999999999995 44322111100 11111000 011566788887 557888888
Q ss_pred Ee-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec--ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 78 SY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 78 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
++ .|+.|++||+.++ +.+..+.. |... |.+++| +|+++++++|+.||.|++||+++++
T Consensus 187 ~~~~d~~i~iwd~~~~----------------~~~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTL----------------ERLQIIENSPRHGA--VSSICI-DEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp EEETTSEEEEEETTTC----------------CEEEEEECCGGGCC--EEEEEE-CTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEeCCCeEEEEeCCCC----------------eeeEEEccCCCCCc--eEEEEE-CCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 86 5999999999887 67888887 6655 999997 9999999999999999999999999
Q ss_pred eEEEEe-cccccceEeEEc----CCCCeEEEEecCCcEEEEcCCCCCC-CCCCC--------------------------
Q 023246 155 LVRLMV-GDRHVVNQLEPH----PHIPMFATCGIEKTVKLWAPMPTDF-PPLPD-------------------------- 202 (285)
Q Consensus 155 ~~~~~~-~h~~~v~~~~~~----p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~-------------------------- 202 (285)
++..+. .|...|.+++|+ |++.+|++++.|+.|++||++.+.. ..+.+
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR 327 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence 999886 788899999665 4677999999999999999976541 22221
Q ss_pred CcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 203 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
|...+..+.+. ++.++++++.|+.|++||+.+++....+
T Consensus 328 ~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 328 SLNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp SGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred cCCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEE
Confidence 33444444332 4578999999999999999988766555
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=5.4e-28 Score=193.38 Aligned_cols=245 Identities=12% Similarity=0.116 Sum_probs=174.0
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i 84 (285)
+++|+||++ ++||+|. |++|+|||+.+++.... ....+|...|++++|+|++++|++| .|++|
T Consensus 28 ~~~l~WS~~--~~lAvg~-D~tV~iWd~~tg~~~~~-------------~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSG--NVLAVAL-DNSVYLWSASSGDILQL-------------LQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTT--SEEEEEE-TTEEEEEETTTCCEEEE-------------EECCSTTCCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceEEEECCC--CEEEEEe-CCEEEEEECCCCCEEEE-------------EEecCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 467999995 4787765 99999999999873211 1125788899999999999999996 49999
Q ss_pred EEEEcCCCCCCCC------------------------CCCCCcc-ccCCCCceEeecccCceeeeeEEEecCCCcEEEEe
Q 023246 85 YLFEKNMGLGPSP------------------------LSLSPED-LQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG 139 (285)
Q Consensus 85 ~iwd~~~~~~~~~------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 139 (285)
++|++.++..... ..+.... ......+..+.+|... +..+.+ .+++++++++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~l~s~ 168 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRW-APDGRHLASG 168 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEE-CTTSSEEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc--eEEEEE-cCCCCEEEEE
Confidence 9999987641000 0000000 1112334556677765 888886 8999999999
Q ss_pred cCCCeEEEEecCCCce----EEEEecccccceEeEEcCCCCeE---EEEecCCcEEEEcCCCCCCCCCCCCcccceeecc
Q 023246 140 SDCGHLFIWKKKGGKL----VRLMVGDRHVVNQLEPHPHIPMF---ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANK 212 (285)
Q Consensus 140 ~~dg~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l---~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 212 (285)
+.|+.|++||+++++. ......|.+.|.+++++|.+..+ ++++.+++|++|+.+.........+...+....+
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~ 248 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 248 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeee
Confidence 9999999999987653 34556688899999999987653 4667889999999987765443334445555544
Q ss_pred ccCCCceEE-EeCCCCeEEEEEecccccceeE----------eeeccccccCCCCCcCeEEEeecCCC
Q 023246 213 QGREDHSRI-TLTPDVIMHVLRLQRRQTLAYR----------ERRYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 213 ~~~~~~~~~-~~s~d~~i~vwd~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
......+++ +++.|+.|++||+++++.+..+ .+++++..+++.+.++.|.++++.+.
T Consensus 249 ~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 249 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 333333333 3568999999999887665443 45667777777777888888877553
No 96
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.5e-28 Score=202.65 Aligned_cols=215 Identities=9% Similarity=0.051 Sum_probs=149.7
Q ss_pred CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec--------CCCEEEEe-cCCcEEE
Q 023246 16 PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN--------TSELLISY-NDELVYL 86 (285)
Q Consensus 16 ~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~--------~~~~l~s~-~d~~i~i 86 (285)
..+|++|+.|++|+|||+.+++... ......+.+|.+.|++++|+| ++++|+++ .|++|+|
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~----------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIIT----------QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEE----------EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccce----------eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 4689999999999999999875311 122233489999999999998 78899996 5999999
Q ss_pred EEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC-cEEEEecCCCeEEEEecCCCceEEE-------
Q 023246 87 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMSGSDCGHLFIWKKKGGKLVRL------- 158 (285)
Q Consensus 87 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~------- 158 (285)
||+... .....+..|... +.+++| +|++ ++|++++.|++|++||+++++....
T Consensus 171 Wd~~~~----------------~~~~~~~~~~~~--v~~v~~-~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 171 WRLTDE----------------GPILAGYPLSSP--GISVQF-RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEEETT----------------EEEEEEEECSSC--EEEEEE-ETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred EECCCC----------------ceeeeecCCCCC--cEEEEE-CCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 999876 566667777766 999997 8876 5899999999999999988765332
Q ss_pred ------------------EecccccceEeEEc-CCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccc-----------
Q 023246 159 ------------------MVGDRHVVNQLEPH-PHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKI----------- 207 (285)
Q Consensus 159 ------------------~~~h~~~v~~~~~~-p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~----------- 207 (285)
..+|...|.++.|+ |+++.+++++.|+++++||+..... ..+..+...+
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQG 311 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccc
Confidence 23567788999986 7999999999999999999876542 2222221111
Q ss_pred -------eeeccccC-CCceEEEeCCCCeEEEEEeccccccee----------EeeeccccccCCCCCcC
Q 023246 208 -------MKANKQGR-EDHSRITLTPDVIMHVLRLQRRQTLAY----------RERRYNAADFESDEEEG 259 (285)
Q Consensus 208 -------~~~~~~~~-~~~~~~~~s~d~~i~vwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 259 (285)
....+... +..++++++.|+.|++||+.+++.... +.++|++..++...++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 312 ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 11111122 334677899999999999988755443 24555555555554443
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.4e-27 Score=199.58 Aligned_cols=225 Identities=17% Similarity=0.275 Sum_probs=171.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
..+|.+++| + +.+|++|+.||+|++||+.+++ ....+ .+|...|.+++|++ .+++++ .|
T Consensus 173 ~~~v~~l~~--~-~~~l~sg~~dg~i~vwd~~~~~--------------~~~~~-~~h~~~v~~l~~~~--~~l~s~s~d 232 (435)
T 1p22_A 173 TGSVLCLQY--D-ERVIITGSSDSTVRVWDVNTGE--------------MLNTL-IHHCEAVLHLRFNN--GMMVTCSKD 232 (435)
T ss_dssp SSCEEEEEC--C-SSEEEEEETTSCEEEEESSSCC--------------EEEEE-CCCCSCEEEEECCT--TEEEEEETT
T ss_pred CCcEEEEEE--C-CCEEEEEcCCCeEEEEECCCCc--------------EEEEE-cCCCCcEEEEEEcC--CEEEEeeCC
Confidence 456778877 3 3688888888888888888775 22233 67899999999974 477775 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCc---eEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
+.|++||+.++ ... ..+.+|... |.++++ +++++++|+.||.|++||+++++.+..
T Consensus 233 g~i~vwd~~~~----------------~~~~~~~~~~~~~~~--v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 233 RSIAVWDMASP----------------TDITLRRVLVGHRAA--VNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp SCEEEEECSSS----------------SCCEEEEEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CcEEEEeCCCC----------------CCceeeeEecCCCCc--EEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 99999999876 333 566778766 999986 678999999999999999999999999
Q ss_pred EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+.+|...|.+++|+ +.++++++.||.|++||++++. +..+.+|...+..+.+ ++.++++++.||.|++||+...
T Consensus 292 ~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 292 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHH
T ss_pred EcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCC
Confidence 99999999999994 6799999999999999998776 4567778877777655 5668999999999999999765
Q ss_pred c---------cceeEe--------eeccccccCCCCCcCeEEEeecCCCCCCC
Q 023246 238 Q---------TLAYRE--------RRYNAADFESDEEEGETYLLGFSDSDASS 273 (285)
Q Consensus 238 ~---------~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 273 (285)
. .+..+. ...++..+.+...++.|.++++.++....
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC--------
T ss_pred CCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 4 222221 11144556777788899999988765443
No 98
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.7e-28 Score=192.15 Aligned_cols=211 Identities=14% Similarity=0.061 Sum_probs=142.8
Q ss_pred CccceeEEEEcCC----CCcEEEEeeCCCcEEEEEccCCcccCCc--CCCCCcccccc------cccCCCCCcceEEEEE
Q 023246 2 NSIRLNAIVIDPR----NPNYFAVGGSDEYARVYDIRKCHWYSPI--SSDTPVDTFCP------RHLIGKNNIHITGLAY 69 (285)
Q Consensus 2 ~~~~v~~~~~s~~----~~~~l~tg~~dg~v~iwd~~~~~~~~~~--~~~~~~~~~~~------~~~~~~h~~~v~~i~~ 69 (285)
....|.+++|+|+ + ..+++++.+ +++|++.+++++... ..++.++.+.. ......|...++.++|
T Consensus 110 ~~~~v~sla~spd~~~~~-~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSSDDESEK-QVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC------CC-EEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECCCccccc-cEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 3457889999997 5 677766632 444444444332220 01111111111 1111467888888899
Q ss_pred ec---CCCEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC-ceeeeeEEEecCCCcEE--------
Q 023246 70 SN---TSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-SQTVKGVNFFGPNDEYV-------- 136 (285)
Q Consensus 70 s~---~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l-------- 136 (285)
++ ++.+|+++ .|++|+|||+.++ +.++++.+|.. ...+.+++| +|+++++
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TG----------------k~l~tL~g~~~~v~~v~~vaf-SpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTG----------------QLLKKMHIDDSYQASVCHKAY-SEMGLLFIVLSHPCA 249 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTC----------------CEEEEEECCC---CCCEEEEE-EETTEEEEEEC----
T ss_pred eccCCCCceEEEecCCCcEEEEECCCC----------------cEEEEEcCCCcceeeeEEEEE-CCCCCEEEEeccCCC
Confidence 98 66899996 5999999999988 78888886543 123677787 8999876
Q ss_pred ----EEecCCCeEEEEecCCCceEEEE-----ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCccc
Q 023246 137 ----MSGSDCGHLFIWKKKGGKLVRLM-----VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEK 206 (285)
Q Consensus 137 ----~~~~~dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~ 206 (285)
++|+.|++|++||..+++.+..+ .+|...+.+..+ ++..+++++.|++|+|||+.+++ +.++.+|...
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~ 327 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ 327 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--C
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC
Confidence 56788999999999999988765 356555444444 47789999999999999999887 4667778777
Q ss_pred ceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 207 IMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
+.....+++++.++++++.|++|++||+
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 6654445778889999999999999996
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=2.2e-27 Score=197.43 Aligned_cols=227 Identities=15% Similarity=0.166 Sum_probs=176.0
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i 84 (285)
++.|+||++ ++||+|. |++|+|||+.+++... .....+|...|++++|+|+|++|++| .|++|
T Consensus 108 ~~~l~wS~~--n~lAvgl-d~tV~lWd~~tg~~~~-------------~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 108 LNLVDWSSG--NVLAVAL-DNSVYLWSASSGDILQ-------------LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp CBCEEECTT--SEEEEEE-TTEEEEEETTTCCEEE-------------EEECCSTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeEEECCC--CEEEEEe-CCEEEEEECCCCCEEE-------------EEEecCCCCcEEEEEECCCCCEEEEEECCCeE
Confidence 567999984 5888776 9999999999987321 11125788899999999999999996 49999
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCC-ceEEEEeccc
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG-KLVRLMVGDR 163 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~ 163 (285)
++||+.++ +.+..+.+|... +.++.+ ++.++++|+.|+.+++||.... ..+..+.+|.
T Consensus 172 ~iWd~~~~----------------~~~~~~~~h~~~--v~~~s~---~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 172 QLWDVQQQ----------------KRLRNMTSHSAR--VGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp EEEETTTT----------------EEEEEECCCSSC--EEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred EEEEcCCC----------------cEEEEEeCCCCc--eEEEee---CCCEEEEEeCCCceeEeeecccceeeEEecccc
Confidence 99999988 788889999876 888775 4789999999999999998764 4567889999
Q ss_pred ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-----CCCCCCcccceeeccccCCCceEEE--eCCCCeEEEEEecc
Q 023246 164 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-----PPLPDNAEKIMKANKQGREDHSRIT--LTPDVIMHVLRLQR 236 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~s~d~~i~vwd~~~ 236 (285)
..+..+.|+|+++++++++.|+.+++|+...+.. .....+...+....+......++++ ++.|+.|++||+.+
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred cceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 9999999999999999999999999999976542 2345567777777766655556554 57899999999988
Q ss_pred cccceeEe---------eeccccccCC--CCCcCeEEEeecCCC
Q 023246 237 RQTLAYRE---------RRYNAADFES--DEEEGETYLLGFSDS 269 (285)
Q Consensus 237 ~~~~~~~~---------~~~~~~~~~~--~~~~~~v~~~~~~~~ 269 (285)
++....+. +.+....+.. +..++.|++++...+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred cccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 76655543 2333333332 234566777776544
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1.5e-27 Score=200.81 Aligned_cols=223 Identities=19% Similarity=0.318 Sum_probs=176.8
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ecCCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~d~~i 84 (285)
+.++.+++ .+|++|+.||+|++||+.+++ ....+ .+|...|++++|+|++ +|++ +.|++|
T Consensus 125 ~~~~~~~~---~~l~sgs~dg~i~vwd~~~~~--------------~~~~~-~~h~~~V~~l~~~~~~-~l~s~s~dg~i 185 (464)
T 3v7d_B 125 ITCLQFED---NYVITGADDKMIRVYDSINKK--------------FLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRTV 185 (464)
T ss_dssp EEEEEEET---TEEEEEETTSCEEEEETTTTE--------------EEEEE-CCCSSCEEEEEECSTT-EEEEEETTSCE
T ss_pred EEEEEECC---CEEEEEcCCCcEEEEECCCCc--------------EEEEE-eCCCcCEEEEEEcCCC-EEEEEeCCCCE
Confidence 46666643 699999999999999999886 33333 6899999999999988 6666 569999
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEec--CCCcEEEEecCCCeEEEEecCCCce-------
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG--PNDEYVMSGSDCGHLFIWKKKGGKL------- 155 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~dg~v~vwd~~~~~~------- 155 (285)
++||+.++ +.+..+.+|... |.+++| . ++++++++++.||.|++||+++++.
T Consensus 186 ~vwd~~~~----------------~~~~~~~~h~~~--v~~l~~-~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 186 RVWDIKKG----------------CCTHVFEGHNST--VRCLDI-VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EEEETTTT----------------EEEEEECCCSSC--EEEEEE-EESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEEECCCC----------------cEEEEECCCCCc--cEEEEE-ecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 99999887 678888889877 999987 5 6789999999999999999987652
Q ss_pred ----------------EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCc
Q 023246 156 ----------------VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDH 218 (285)
Q Consensus 156 ----------------~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 218 (285)
+..+.+|...|.++ +++++++++++.|+.|++||++.++ +..+.+|...+..+.+ .+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~~ 323 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIY-DHERK 323 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-ETTTT
T ss_pred CCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEE-cCCCC
Confidence 55677888888876 5678899999999999999998776 4566677777766655 45667
Q ss_pred eEEEeCCCCeEEEEEecccccceeEee--------eccccccCCCCCcCeEEEeecCCC
Q 023246 219 SRITLTPDVIMHVLRLQRRQTLAYRER--------RYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
.+++++.|+.|++||+++++.+..+.. ......+.+...++.+.+++...+
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 899999999999999988766555421 112345556666777888887654
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.8e-28 Score=221.02 Aligned_cols=198 Identities=10% Similarity=0.131 Sum_probs=159.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|++++|+|++ .+||+|+.||+|+||+....+. ... ..|..+|++++|+| +++|+++ .|
T Consensus 17 ~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~--------------~~~--~~~~~~V~~l~fsp-g~~L~S~s~D 78 (902)
T 2oaj_A 17 SSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEV--------------VIK--LEDRSAIKEMRFVK-GIYLVVINAK 78 (902)
T ss_dssp SSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEE--------------EEE--CSSCCCEEEEEEET-TTEEEEEETT
T ss_pred CCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEE--------------EEE--cCCCCCEEEEEEcC-CCEEEEEECc
Confidence 4689999999986 8999999999999999876542 111 34788999999999 8888885 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceE-----
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV----- 156 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~----- 156 (285)
++|++||+.++ +.+..+. |... |.+++| +|+++++++|+.||.|++||++++++.
T Consensus 79 ~~v~lWd~~~~----------------~~~~~~~-~~~~--V~~v~~-sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~ 138 (902)
T 2oaj_A 79 DTVYVLSLYSQ----------------KVLTTVF-VPGK--ITSIDT-DASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD 138 (902)
T ss_dssp CEEEEEETTTC----------------SEEEEEE-CSSC--EEEEEC-CTTCSEEEEEETTSCEEEEETTTTEEEEEEEC
T ss_pred CeEEEEECCCC----------------cEEEEEc-CCCC--EEEEEE-CCCCCEEEEEcCCCcEEEEECCCCccccceec
Confidence 99999999887 5667775 4444 999997 999999999999999999999987754
Q ss_pred ------EEEecccccceEeEEcCC-CCeEEEEecCCcEEEEcCCCCCC-CCCCCC------------------cccceee
Q 023246 157 ------RLMVGDRHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPTDF-PPLPDN------------------AEKIMKA 210 (285)
Q Consensus 157 ------~~~~~h~~~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~------------------~~~~~~~ 210 (285)
..+.+|.+.|.+++|+|+ +..+++++.|+.| +||++.++. ..+..+ ...+..+
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v 217 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQS 217 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEE
Confidence 223568899999999996 4679999999999 999987652 222222 3445555
Q ss_pred ccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 211 NKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 211 ~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
.+ .+++.++++++.|+.|++||+++++.+
T Consensus 218 ~f-spdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 218 LY-HPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EE-CTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EE-cCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 54 556779999999999999999876554
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=197.06 Aligned_cols=160 Identities=16% Similarity=0.227 Sum_probs=134.6
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC---CEEEE
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS---ELLIS 78 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~---~~l~s 78 (285)
...+|++++|+|+++.+|++++.||.|++||+.+++.. .. ..+...+.++.|++.+ .++++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------------~~--~~~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA--------------DV--FNFEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE--------------EE--EECSSCEEEEEECSSCSSCCEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc--------------ee--ccCCCceeeeEeecCCCCCcEEEE
Confidence 45689999999965689999999999999999987632 21 1356789999999855 47777
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCCCeEEEEecCCCc-e
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDCGHLFIWKKKGGK-L 155 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~-~ 155 (285)
+ .++.|++||+.++ +.+..+..|... |.+++| +|+++ ++++++.||.|++||++++. .
T Consensus 162 ~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~--v~~~~~-~~~~~~ll~~~~~dg~i~i~d~~~~~~~ 222 (408)
T 4a11_B 162 GTRGPKVQLCDLKSG----------------SCSHILQGHRQE--ILAVSW-SPRYDYILATASADSRVKLWDVRRASGC 222 (408)
T ss_dssp EESSSSEEEEESSSS----------------CCCEEECCCCSC--EEEEEE-CSSCTTEEEEEETTSCEEEEETTCSSCC
T ss_pred EcCCCeEEEEeCCCc----------------ceeeeecCCCCc--EEEEEE-CCCCCcEEEEEcCCCcEEEEECCCCCcc
Confidence 5 5999999999887 678888888876 999997 99988 58999999999999998765 4
Q ss_pred EEEE---------------ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 156 VRLM---------------VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 156 ~~~~---------------~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
+..+ ..|...|.+++|+|++++|++++.|+.|++||++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 223 LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 4444 5688899999999999999999999999999997654
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=5.5e-28 Score=209.97 Aligned_cols=237 Identities=12% Similarity=0.117 Sum_probs=182.2
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCC----cccCCcCCCCCcccccccccCCCCCcc-eEEEEEec--CCC
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKC----HWYSPISSDTPVDTFCPRHLIGKNNIH-ITGLAYSN--TSE 74 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~i~~s~--~~~ 74 (285)
.++.|++++|+|++ .+|++++ ++.|++||+.++ + ....+ .+|... |++++|+| +++
T Consensus 17 ~~~~v~~~~~spdg-~~l~~~~-~~~v~v~~~~~~~~~~~--------------~~~~~-~~h~~~~v~~~~~sp~~~~~ 79 (615)
T 1pgu_A 17 QRNFTTHLSYDPTT-NAIAYPC-GKSAFVRCLDDGDSKVP--------------PVVQF-TGHGSSVVTTVKFSPIKGSQ 79 (615)
T ss_dssp CTTCCCCCEEETTT-TEEEEEE-TTEEEEEECCSSCCSSC--------------SEEEE-CTTTTSCEEEEEECSSTTCC
T ss_pred ccCceeEEEECCCC-CEEEEec-CCeEEEEECCCCCCccc--------------cceEE-ecCCCceEEEEEECcCCCCC
Confidence 45789999999986 8888888 889999999876 3 22233 789999 99999999 999
Q ss_pred EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC----CeEEEEe
Q 023246 75 LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWK 149 (285)
Q Consensus 75 ~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~vwd 149 (285)
+|+++ .|+.|++||+.++.. ......+....+..|... |.+++| +|+++++++++.+ +.|++||
T Consensus 80 ~l~s~~~dg~v~vw~~~~~~~--------~~~~~~~~~~~~~~~~~~--v~~~~~-s~~~~~l~~~~~~~~~~~~v~~~d 148 (615)
T 1pgu_A 80 YLCSGDESGKVIVWGWTFDKE--------SNSVEVNVKSEFQVLAGP--ISDISW-DFEGRRLCVVGEGRDNFGVFISWD 148 (615)
T ss_dssp EEEEEETTSEEEEEEEEEEGG--------GTEEEEEEEEEEECCSSC--EEEEEE-CTTSSEEEEEECCSSCSEEEEETT
T ss_pred EEEEecCCCEEEEEeCCCCcc--------cccccccccchhhccccc--EEEEEE-eCCCCEEEEeccCCCCccEEEEEE
Confidence 99996 599999999963200 000000356677778766 999997 9999999999987 7899998
Q ss_pred cCCCceEEEEecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCC-CCCCCCCcc---cceeeccccCC-CceEEEe
Q 023246 150 KKGGKLVRLMVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD-FPPLPDNAE---KIMKANKQGRE-DHSRITL 223 (285)
Q Consensus 150 ~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~---~~~~~~~~~~~-~~~~~~~ 223 (285)
.++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+...+ +..+..|.. .+..+.+ .++ +.+++++
T Consensus 149 --~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~ 225 (615)
T 1pgu_A 149 --SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF-SPDSGEFVITV 225 (615)
T ss_dssp --TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE-CSTTCCEEEEE
T ss_pred --CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE-CCCCCCEEEEE
Confidence 5778899999999999999999998 79999999999999998765 355666766 6666655 445 7789999
Q ss_pred CCCCeEEEEEecccccceeE-----eeec--------cccccCCCCCcCeEEEeecCCC
Q 023246 224 TPDVIMHVLRLQRRQTLAYR-----ERRY--------NAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 224 s~d~~i~vwd~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
+.|+.|++||+.+++.+..+ .+.. +...+.....++.+.+++...+
T Consensus 226 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT
T ss_pred eCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999999887665554 1211 3333444445566777766544
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4e-27 Score=187.81 Aligned_cols=232 Identities=14% Similarity=0.152 Sum_probs=179.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
...|.+++|+|++ .+|++|+.||.|++|++...... .....+.+|...|.+++| ++.+|+++ .|
T Consensus 59 ~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~------------~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d 123 (313)
T 3odt_A 59 QGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSGE------------DPLYTLIGHQGNVCSLSF--QDGVVISGSWD 123 (313)
T ss_dssp SSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTTS------------CC-CEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCCC------------CcccchhhcccCEEEEEe--cCCEEEEEeCC
Confidence 5689999999975 89999999999999999865311 111222689999999999 45677775 59
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++|| .. +....+..|... +.++.+.+++++++++++.||.|++|| ..+.+..+..
T Consensus 124 ~~i~~~d--~~----------------~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~ 181 (313)
T 3odt_A 124 KTAKVWK--EG----------------SLVYNLQAHNAS--VWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSG 181 (313)
T ss_dssp SEEEEEE--TT----------------EEEEEEECCSSC--EEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECS
T ss_pred CCEEEEc--CC----------------cEEEecccCCCc--eeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEec
Confidence 9999999 33 467778888866 999998445999999999999999999 4567777776
Q ss_pred -ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 162 -DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 162 -h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
|...|.+++|+|++. +++++.|+.|++||++.++ +..+..|...+..+.+.. ++ .+++++.|+.|++||+.+.+.
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCE
T ss_pred cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCce
Confidence 889999999999988 9999999999999998776 355666777777775533 33 689999999999999988765
Q ss_pred ceeE----------eeeccccccCCCCCcCeEEEeecCCCCCCCCC
Q 023246 240 LAYR----------ERRYNAADFESDEEEGETYLLGFSDSDASSEG 275 (285)
Q Consensus 240 ~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 275 (285)
...+ .+.+++. +.....++.++++++..+....+.
T Consensus 259 ~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 259 KQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp EEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred eEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 5444 3344444 444566778888888876554433
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=212.98 Aligned_cols=206 Identities=12% Similarity=0.163 Sum_probs=166.2
Q ss_pred CccceeEEEEcCCC-CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC--CCEEEE
Q 023246 2 NSIRLNAIVIDPRN-PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT--SELLIS 78 (285)
Q Consensus 2 ~~~~v~~~~~s~~~-~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~--~~~l~s 78 (285)
+..+|++++|+|+. +.+|++|+.||+|++||+.+++. .......+|...|++++|+|+ +.++++
T Consensus 52 h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~s 118 (753)
T 3jro_A 52 HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW-------------SQIAVHAVHSASVNSVQWAPHEYGPLLLV 118 (753)
T ss_dssp CSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE-------------EEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc-------------cccccccCCCCCeEEEEECCCCCCCEEEE
Confidence 35689999999861 48999999999999999997742 122223679999999999999 888888
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-------------CCcEEEEecCCCe
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-------------NDEYVMSGSDCGH 144 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~l~~~~~dg~ 144 (285)
+ .|+.|++||+.... ......+.+|... |.+++| +| +++++++|+.||.
T Consensus 119 gs~dg~I~vwdl~~~~--------------~~~~~~~~~~~~~--v~~l~~-~p~~~~~~~~~~~~~d~~~l~sgs~dg~ 181 (753)
T 3jro_A 119 ASSDGKVSVVEFKENG--------------TTSPIIIDAHAIG--VNSASW-APATIEEDGEHNGTKESRKFVTGGADNL 181 (753)
T ss_dssp EETTSEEEEEECCSSS--------------CCCCEEEECCSSC--EEEEEE-CCCC---------CGGGCCEEEEETTSC
T ss_pred EeCCCcEEEEEeecCC--------------CcceeEeecCCCc--eEEEEe-cCcccccccccccCCCCCEEEEEECCCe
Confidence 6 59999999998751 1234556677766 999997 88 5899999999999
Q ss_pred EEEEecCCC----ceEEEEecccccceEeEEcCC---CCeEEEEecCCcEEEEcCCCCC------CCCCCCCcccceeec
Q 023246 145 LFIWKKKGG----KLVRLMVGDRHVVNQLEPHPH---IPMFATCGIEKTVKLWAPMPTD------FPPLPDNAEKIMKAN 211 (285)
Q Consensus 145 v~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~---~~~l~t~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~ 211 (285)
|++||++++ .....+.+|...|.+++|+|+ +++|++++.||.|++||++.+. ......+...+..+.
T Consensus 182 I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~ 261 (753)
T 3jro_A 182 VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS 261 (753)
T ss_dssp EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEE
T ss_pred EEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEE
Confidence 999999877 456777899999999999999 8999999999999999997752 233344556665555
Q ss_pred cccCCCceEEEeCCCCeEEEEEecccc
Q 023246 212 KQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 212 ~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
+ .+++.++++++.||.|++|++....
T Consensus 262 ~-spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 262 W-SLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp E-CTTTCCEEEECSSSCEECCBCCSSS
T ss_pred E-cCCCCEEEEEcCCCEEEEEecCCCC
Confidence 4 4567789999999999999998644
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=1.8e-27 Score=222.19 Aligned_cols=199 Identities=18% Similarity=0.247 Sum_probs=167.9
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC--CEEEEe
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS--ELLISY 79 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~--~~l~s~ 79 (285)
+...|++++|+|++ .+|++|+.||+|++||+.+++ ....+ .+|...|.+++|+|++ .+++++
T Consensus 656 h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~--------------~~~~~-~~~~~~v~~~~~~~~~~~~~l~sg 719 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGK--------------LVHTY-DEHSEQVNCCHFTNKSNHLLLATG 719 (1249)
T ss_dssp CSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--------------EEEEE-ECCSSCEEEEEECSSSSCCEEEEE
T ss_pred CCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCc--------------eEEEE-cCCCCcEEEEEEecCCCceEEEEE
Confidence 35789999999986 899999999999999999886 23333 6899999999999954 477775
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
.|+.|++||+.++ +....+.+|... |.+++| +|+++++++++.||.|++||+.+++....
T Consensus 720 ~~d~~v~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-sp~~~~l~s~s~dg~v~vwd~~~~~~~~~ 780 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQK----------------ECRNTMFGHTNS--VNHCRF-SPDDELLASCSADGTLRLWDVRSANERKS 780 (1249)
T ss_dssp ETTSCEEEEETTSS----------------SEEEEECCCSSC--EEEEEE-CSSTTEEEEEESSSEEEEEEGGGTEEEEE
T ss_pred eCCCeEEEEECCCc----------------chhheecCCCCC--EEEEEE-ecCCCEEEEEECCCeEEEEeCCCCcccce
Confidence 5999999999987 678888899877 999997 99999999999999999999877654333
Q ss_pred E-------------------------------------------------------ecccccceEeEEcCCCCeEEEEec
Q 023246 159 M-------------------------------------------------------VGDRHVVNQLEPHPHIPMFATCGI 183 (285)
Q Consensus 159 ~-------------------------------------------------------~~h~~~v~~~~~~p~~~~l~t~~~ 183 (285)
+ .+|...|.+++|+|+++++++++.
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 781 INVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp EECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS
T ss_pred ecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC
Confidence 2 167788999999999999999999
Q ss_pred CCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 184 EKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 184 d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
|+.|++|++..+. +..+.+|...+..+.+ .+++..+++++.|+.+++|++..
T Consensus 861 dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~-spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 861 QYCVELWNIDSRLKVADCRGHLSWVHGVMF-SPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp SSCEEEEETTTTEEEEEECCCSSCEEEEEE-CTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCeEEEEEcCCCceeeecCCCccceEEEEE-CCCCCEEEEEeCCCeEEEEEccc
Confidence 9999999998765 4566778887777765 45677899999999999999764
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=7.4e-28 Score=215.81 Aligned_cols=207 Identities=18% Similarity=0.174 Sum_probs=172.9
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N 80 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~ 80 (285)
+..+|++++|+|++ .+|++|+.||.|++||+.+++ ....+ .+|...|++++|+|++.+|+++ .
T Consensus 54 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~--------------~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~ 117 (814)
T 3mkq_A 54 TETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE--------------KVVDF-EAHPDYIRSIAVHPTKPYVLSGSD 117 (814)
T ss_dssp CSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC--------------EEEEE-ECCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc--------------EEEEE-ecCCCCEEEEEEeCCCCEEEEEcC
Confidence 35789999999975 899999999999999999886 33333 6799999999999999988886 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
|+.|++|++..+. .....+.+|... |.+++| +| +++.+++++.||.|++||+.+++....+
T Consensus 118 dg~i~vw~~~~~~---------------~~~~~~~~~~~~--v~~~~~-~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 118 DLTVKLWNWENNW---------------ALEQTFEGHEHF--VMCVAF-NPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp TSEEEEEEGGGTS---------------EEEEEEECCSSC--EEEEEE-ETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred CCEEEEEECCCCc---------------eEEEEEcCCCCc--EEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 9999999997652 355677788866 999997 88 8899999999999999999988887777
Q ss_pred eccc-ccceEeEEcC--CCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 160 VGDR-HVVNQLEPHP--HIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 160 ~~h~-~~v~~~~~~p--~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
..+. ..+.+++|+| ++.++++++.||.|++||++.+. +..+.+|...+..+.+ .+++.++++++.||.|++||+.
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF-HPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE-CSSSSEEEEEETTSCEEEEETT
T ss_pred ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE-cCCCCEEEEEeCCCeEEEEECC
Confidence 6554 8899999999 99999999999999999998765 4556667766666654 5566689999999999999998
Q ss_pred ccccceeE
Q 023246 236 RRQTLAYR 243 (285)
Q Consensus 236 ~~~~~~~~ 243 (285)
+.+....+
T Consensus 259 ~~~~~~~~ 266 (814)
T 3mkq_A 259 TYKVEKTL 266 (814)
T ss_dssp TCSEEEEE
T ss_pred CCcEEEEe
Confidence 86554443
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=2.9e-27 Score=197.65 Aligned_cols=221 Identities=17% Similarity=0.277 Sum_probs=176.1
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~ 82 (285)
..|.++++ ++ .+|++|+.||+|++||+.+++ ....+ .+|...|.+++| ++++|+++ .||
T Consensus 134 ~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~~--------------~~~~~-~~h~~~v~~l~~--~~~~l~sg~~dg 193 (435)
T 1p22_A 134 KGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLE--------------CKRIL-TGHTGSVLCLQY--DERVIITGSSDS 193 (435)
T ss_dssp CCEEEEEC--CS-SEEEEEESSSCEEEEESSSCC--------------EEEEE-CCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred CcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCCe--------------EEEEE-cCCCCcEEEEEE--CCCEEEEEcCCC
Confidence 45777777 43 799999999999999998876 33333 789999999999 67888886 599
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceE---EEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLV---RLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~---~~~ 159 (285)
+|++||+.++ +.+..+.+|... |.+++| + +.++++|+.||.|++||+++++.+ ..+
T Consensus 194 ~i~vwd~~~~----------------~~~~~~~~h~~~--v~~l~~-~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 194 TVRVWDVNTG----------------EMLNTLIHHCEA--VLHLRF-N--NGMMVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp CEEEEESSSC----------------CEEEEECCCCSC--EEEEEC-C--TTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred eEEEEECCCC----------------cEEEEEcCCCCc--EEEEEE-c--CCEEEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 9999999987 678888888876 999996 5 469999999999999999987755 677
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
.+|...|.+++| +++++++++.|+.|++||++++. +..+.+|...+..+.+ .+.++++++.|+.|++||+++++
T Consensus 253 ~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 253 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCCCC
Confidence 789999999999 67899999999999999998876 3556667777766654 35689999999999999999876
Q ss_pred cceeEee--------eccccccCCCCCcCeEEEeecCCCC
Q 023246 239 TLAYRER--------RYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 239 ~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
.+..+.. ..++..+..+..+|.|.++++..+.
T Consensus 328 ~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHT
T ss_pred EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCC
Confidence 6554421 1234445556667778777765443
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=7.6e-27 Score=195.62 Aligned_cols=219 Identities=15% Similarity=0.256 Sum_probs=176.3
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i 84 (285)
+.++.+ ++ .+|++|+.||+|++||+.+++ ....+ .+|...|.+++|+ +.+++++ .|++|
T Consensus 122 ~~~~~~--~g-~~l~sg~~dg~i~vwd~~~~~--------------~~~~~-~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 122 ITCLQF--CG-NRIVSGSDDNTLKVWSAVTGK--------------CLRTL-VGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp EEEEEE--ET-TEEEEEETTSCEEEEETTTCC--------------EEEEC-CCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred EEEEEE--cC-CEEEEEECCCcEEEEECCCCc--------------EEEEE-cCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 455555 43 799999999999999999886 33333 6899999999998 4577775 59999
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecccc
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH 164 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~ 164 (285)
++||+.++ +.+..+.+|... |.++.+ + ++.+++|+.||.|++||+++++.+..+.+|..
T Consensus 182 ~vwd~~~~----------------~~~~~~~~h~~~--v~~~~~-~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 240 (445)
T 2ovr_B 182 KVWNAETG----------------ECIHTLYGHTST--VRCMHL-H--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA 240 (445)
T ss_dssp EEEETTTT----------------EEEEEECCCSSC--EEEEEE-E--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS
T ss_pred EEEECCcC----------------cEEEEECCCCCc--EEEEEe-c--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc
Confidence 99999887 678888888876 999986 4 67899999999999999999999999999999
Q ss_pred cceEeEEcCCCCeEEEEecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 165 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 165 ~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
.|.+++| ++.++++++.|+.|++||++.+. +..+.+|...+..+.+ ++..+++++.|+.|++||+++++.+..+
T Consensus 241 ~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 241 AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp CEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred cEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 9999999 67889999999999999997765 4556677777777655 5568999999999999999887665444
Q ss_pred e--------eeccccccCCCCCcCeEEEeecCCCC
Q 023246 244 E--------RRYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 244 ~--------~~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
. ..+....+.....++.+.+++...+.
T Consensus 316 ~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 316 TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 350 (445)
T ss_dssp CCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCC
T ss_pred cCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCc
Confidence 2 22234455666667778888876553
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=193.74 Aligned_cols=222 Identities=9% Similarity=0.011 Sum_probs=161.6
Q ss_pred CcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcEEEEEcCCCCC
Q 023246 16 PNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLG 94 (285)
Q Consensus 16 ~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~iwd~~~~~~ 94 (285)
+.+|++|+.||+|++||+.+++.... + . ...|.++.|+|. ++++ .|++|++|+....
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~--------------~-~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~-- 105 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITT--------------I-T--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQ-- 105 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEE--------------E-E--EECCCTTCCCCS---EEEECSTTEEEEEETTTE--
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEE--------------E-e--cCCceeeeeCCc---eEEecCCCeEEEEEccCc--
Confidence 37999999999999999998863221 1 1 345667778887 5664 5999999987632
Q ss_pred CCCCCCCCccccCCCCceEee-cccCceeeeeEEEecC--CCcEEEEecCCCeEEEEecCCCceEEEEe-cccccceEeE
Q 023246 95 PSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGP--NDEYVMSGSDCGHLFIWKKKGGKLVRLMV-GDRHVVNQLE 170 (285)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~ 170 (285)
+...+....+.+..+. .|... |.+++| +| +++++++++.||.|++||+++++.+.... .|...|.+++
T Consensus 106 -----~~~~~~~~~~~~~~~~~~~~~~--v~~~~~-~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 106 -----ITILDSKTNKVLREIEVDSANE--IIYMYG-HNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp -----EEEEETTTCCEEEEEECCCSSC--EEEEEC-CC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEE
T ss_pred -----eEEeecCCcceeEEeecCCCCC--EEEEEc-CCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEE
Confidence 0001111123333443 44444 999997 99 99999999999999999999999877664 3556899999
Q ss_pred EcCCCCeEEEEecCCcEEEEcCCCCCCC--CCCC-CcccceeeccccCCCceEEEeCCCCeEEEEEeccccccee-----
Q 023246 171 PHPHIPMFATCGIEKTVKLWAPMPTDFP--PLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAY----- 242 (285)
Q Consensus 171 ~~p~~~~l~t~~~d~~i~iwd~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~----- 242 (285)
|+|++.+|++|+.|+.|++||++.+... .+.. |...+..+.+ .+++.++++++ ++.|++||+++.+.+..
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~f-s~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~ 255 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKF-ADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT 255 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEE-CTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEE-eCCCCEEEEEe-CCeEEEEEcCCCCcceeecccc
Confidence 9999999999999999999999887754 5766 7777777765 45667888888 55999999998754322
Q ss_pred ----------EeeeccccccCCCCC-cCeEEEeecCCC
Q 023246 243 ----------RERRYNAADFESDEE-EGETYLLGFSDS 269 (285)
Q Consensus 243 ----------~~~~~~~~~~~~~~~-~~~v~~~~~~~~ 269 (285)
+.+.+++..++.... ++.+.+++++.+
T Consensus 256 ~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 256 IPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp C-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 455666666666433 555777766544
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=8.9e-27 Score=195.18 Aligned_cols=218 Identities=17% Similarity=0.262 Sum_probs=154.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~ 83 (285)
.|.+++|++ .++++|+.||+|++||+.+++ .... +.+|...|.+++| ++.+++++ .|+.
T Consensus 201 ~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~--------------~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 201 TVRCMHLHE---KRVVSGSRDATLRVWDIETGQ--------------CLHV-LMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp CEEEEEEET---TEEEEEETTSEEEEEESSSCC--------------EEEE-EECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred cEEEEEecC---CEEEEEeCCCEEEEEECCCCc--------------EEEE-EcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 445555532 345555555555555555443 1112 2467777777777 55666664 4788
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEeccc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 163 (285)
|++||+.++ +.+..+.+|... +.++.| +++++++++.||.|++||+++++.+..+.+|.
T Consensus 261 i~iwd~~~~----------------~~~~~~~~~~~~--v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 319 (445)
T 2ovr_B 261 VKVWDPETE----------------TCLHTLQGHTNR--VYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 319 (445)
T ss_dssp EEEEEGGGT----------------EEEEEECCCSSC--EEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCC
T ss_pred EEEEECCCC----------------cEeEEecCCCCc--eEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCc
Confidence 888887766 677888888866 999986 68899999999999999999999999999999
Q ss_pred ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC---CcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 164 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
..+.++.++ ++++++++.||.|++||++.++. ..+.. |...+..+.+ .+.++++++.||.|++||+.+++.
T Consensus 320 ~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 320 SLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE---CSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE---CCCEEEEEeCCCeEEEEECCCCce
Confidence 999988875 56999999999999999987653 33433 5666666655 346899999999999999998766
Q ss_pred ceeE---------------eeeccccccCCCCCcCe----EEEeecCC
Q 023246 240 LAYR---------------ERRYNAADFESDEEEGE----TYLLGFSD 268 (285)
Q Consensus 240 ~~~~---------------~~~~~~~~~~~~~~~~~----v~~~~~~~ 268 (285)
+..+ .+++++..++....+|. +++++|+.
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 5544 23344444444444443 66666654
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=2.2e-27 Score=191.76 Aligned_cols=224 Identities=12% Similarity=0.059 Sum_probs=169.1
Q ss_pred ccceeEEEEcCCCCc-EEEEeeCCCcEEEEEc-cCCcccCCcCCCCCcccccccccCCC--CCcceEEEEEecCCCEEEE
Q 023246 3 SIRLNAIVIDPRNPN-YFAVGGSDEYARVYDI-RKCHWYSPISSDTPVDTFCPRHLIGK--NNIHITGLAYSNTSELLIS 78 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~-~l~tg~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~s~~~~~l~s 78 (285)
...|++++|+|++ . +|++|+.||.|++||+ .+++. . .+.+ |...|.+++|+| +.+|++
T Consensus 56 ~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~---------------~-~~~~~~~~~~v~~l~~~~-~~~l~s 117 (342)
T 1yfq_A 56 KHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPSF---------------Q-ALTNNEANLGICRICKYG-DDKLIA 117 (342)
T ss_dssp SSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSSE---------------E-ECBSCCCCSCEEEEEEET-TTEEEE
T ss_pred CCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCce---------------E-eccccCCCCceEEEEeCC-CCEEEE
Confidence 4689999999975 8 9999999999999999 76641 1 1256 999999999999 888888
Q ss_pred e-cCCcEEEEEcCC---------CCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEE
Q 023246 79 Y-NDELVYLFEKNM---------GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 79 ~-~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vw 148 (285)
+ .|+.|++||+.. . +.+..+. |... +.+++| ++++ +++++.++.|++|
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~-~~~~--v~~~~~-~~~~--l~~~~~d~~i~i~ 175 (342)
T 1yfq_A 118 ASWDGLIEVIDPRNYGDGVIAVKN----------------LNSNNTK-VKNK--IFTMDT-NSSR--LIVGMNNSQVQWF 175 (342)
T ss_dssp EETTSEEEEECHHHHTTBCEEEEE----------------SCSSSSS-SCCC--EEEEEE-CSSE--EEEEESTTEEEEE
T ss_pred EcCCCeEEEEcccccccccccccC----------------CeeeEEe-eCCc--eEEEEe-cCCc--EEEEeCCCeEEEE
Confidence 5 599999999976 4 3444554 5544 999997 7776 9999999999999
Q ss_pred ecCC-Cc--eEEEEecccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCC------C-CCCCCCCcc---------cce
Q 023246 149 KKKG-GK--LVRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPT------D-FPPLPDNAE---------KIM 208 (285)
Q Consensus 149 d~~~-~~--~~~~~~~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~------~-~~~~~~~~~---------~~~ 208 (285)
|+++ +. .......|...|.+++|+| +++++++++.||.|++|+++.. . ...+..|.. .+.
T Consensus 176 d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp ESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred ECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEE
Confidence 9987 54 3344556888999999999 9999999999999999998765 2 233444433 555
Q ss_pred eeccccCCCceEEEeCCCCeEEEEEecccccceeEee--eccccccCCCCCcCeEEEeecCCCC
Q 023246 209 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRER--RYNAADFESDEEEGETYLLGFSDSD 270 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~ 270 (285)
.+.+ .+++.++++++.||.|++||+.+++.+..+.. ......+. .++..++.+..|+-
T Consensus 256 ~~~~-s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~---~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 256 SIEF-SPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA---CSDNILCLATSDDT 315 (342)
T ss_dssp EEEE-CTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE---ECSSEEEEEEECTH
T ss_pred EEEE-cCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec---CCCCeEEEEecCCc
Confidence 5543 45677899999999999999998876655532 22233333 33445555555554
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.6e-28 Score=200.82 Aligned_cols=194 Identities=11% Similarity=0.070 Sum_probs=148.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCc-----ceEEEEEecCCCEEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-----HITGLAYSNTSELLI 77 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~i~~s~~~~~l~ 77 (285)
...|.+++|||+| .+||+++.||.|+|||... +...+ . |.. .|.+++|||+|++|+
T Consensus 85 ~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~----------------~l~~l-~-~~~~~~~~sv~svafSPDG~~LA 145 (588)
T 2j04_A 85 VCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK----------------MLTNL-D-SKGNLSSRTYHCFEWNPIESSIV 145 (588)
T ss_dssp SCCEEEEEECSSS-SCEEEEETTSCEEEEETTE----------------EEEEC-C-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred CCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc----------------eeeec-c-CCCccccccEEEEEEcCCCCEEE
Confidence 3569999999986 8999999999999999542 11111 3 333 599999999999999
Q ss_pred Eec-CCcEEEEEcCCCCCCCCCCCCCccccCCC--CceEe----ecccCceeeeeEEEecCCCcEEEEecCCCeEEEEec
Q 023246 78 SYN-DELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVY----SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK 150 (285)
Q Consensus 78 s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 150 (285)
+++ ||+|++||+..+. +...+ .+.++ .+|... |.+++| +|++ +++++.|+.|++||+
T Consensus 146 sgs~DGtVkIWd~~~~~-----------l~~~~~i~l~ti~~~~~gh~~~--V~sVaw-SPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNS-----------ENTPEFYFESSIRLSDAGSKDW--VTHIVW-YEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEETTSEEEEEECCCCT-----------TTCCCCEEEEEEECSCTTCCCC--EEEEEE-ETTE--EEEEETTCCEEEECC
T ss_pred EEcCCCEEEEEECCCCc-----------cccccceeeeeeeccccccccc--EEEEEE-cCCc--EEEEeCCCeEEEEEC
Confidence 965 9999999998761 00000 24565 455555 999997 9998 788888999999999
Q ss_pred CCCce---EEEE-ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCC-CCcccceeecc-ccCCCceEEEeC
Q 023246 151 KGGKL---VRLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANK-QGREDHSRITLT 224 (285)
Q Consensus 151 ~~~~~---~~~~-~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~s 224 (285)
..++. ..++ .+|...|.+++|+ ++.+++++ +++|++||+.++....+. +|...+..+.. ..++...++++.
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 87773 4566 4788999999999 68899887 699999999888763333 67777766543 144556788889
Q ss_pred CCCeEEEEEec
Q 023246 225 PDVIMHVLRLQ 235 (285)
Q Consensus 225 ~d~~i~vwd~~ 235 (285)
.+|+ ++|.+.
T Consensus 287 edG~-klw~~d 296 (588)
T 2j04_A 287 KTSY-KVLLED 296 (588)
T ss_dssp SCEE-EEEESS
T ss_pred CCCC-EEEeec
Confidence 9999 999976
No 114
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.4e-26 Score=186.77 Aligned_cols=199 Identities=14% Similarity=0.215 Sum_probs=160.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC--EEEEe-
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE--LLISY- 79 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~--~l~s~- 79 (285)
...+..+.+++++ .+|++|+.|+.+++||+.... .......+|...+..++|++++. +++++
T Consensus 128 ~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 128 TKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVC--------------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp SSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCE--------------EEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCceeEEEEeecC-ccceeecCCCeEEEEEeCCCc--------------eEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 3466778899975 899999999999999987654 22333468899999999998764 56664
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
.|+.|++||+... +....+.+|... |.+++| +|++++|++|+.||.|++||+++.+++..+
T Consensus 193 ~d~~i~i~d~~~~----------------~~~~~~~~h~~~--v~~~~~-s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 193 WDKLVKVWNLANC----------------KLKTNHIGHTGY--LNTVTV-SPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp TTSCEEEEETTTT----------------EEEEEECCCSSC--EEEEEE-CTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCC----------------ceeeEecCCCCc--EEEEEE-CCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 5999999999887 678888889876 999997 999999999999999999999999999888
Q ss_pred ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC----------CCCCCCcccceeeccccCCCceEEEeCCCCeE
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF----------PPLPDNAEKIMKANKQGREDHSRITLTPDVIM 229 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i 229 (285)
..+ ..|.+++|+|++. +++++.|+.|++||++.... .....|...+..+.+ .++++++++++.||.|
T Consensus 254 ~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 254 DGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW-SADGQTLFAGYTDNLV 330 (340)
T ss_dssp ECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE-CTTSSEEEEEETTSCE
T ss_pred cCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE-CCCCCEEEEEeCCCEE
Confidence 754 6899999999875 55666799999999976531 123346666666654 5667799999999999
Q ss_pred EEEEecccc
Q 023246 230 HVLRLQRRQ 238 (285)
Q Consensus 230 ~vwd~~~~~ 238 (285)
++||++++.
T Consensus 331 ~iW~~~tGt 339 (340)
T 4aow_A 331 RVWQVTIGT 339 (340)
T ss_dssp EEEEEEC--
T ss_pred EEEeCCCcC
Confidence 999998874
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=4.2e-27 Score=191.48 Aligned_cols=195 Identities=9% Similarity=0.148 Sum_probs=142.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-e-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~-~ 80 (285)
..+|++++|+|++ .+|++|+.++ ++||++.+++.. .. .+...+..+++.+++..++. + .
T Consensus 19 ~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~--------------~~---~~~~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 19 SNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHI--------------MS---QEMRHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEE--------------EE---EECSCCCEEEECTTSSEEEEECSS
T ss_pred CCceEEEEECCCC-CEEEEEcCCE-EEEEecCCccee--------------ee---eecCCeEEEEEcCCCCEEEEEECC
Confidence 5689999999986 8999988775 789998866421 11 11124778889988886643 4 5
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC---------------------------
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND--------------------------- 133 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------------------- 133 (285)
|++|++||..++ +.+..+. +... |.++.+ +++.
T Consensus 80 d~~v~iWd~~~~----------------~~~~~~~-~~~~--v~~v~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 139 (355)
T 3vu4_A 80 KEVVHIWDDVKK----------------QDVSRIK-VDAP--VKDLFL-SREFIVVSYGDVISVFKFGNPWKRITDDIRF 139 (355)
T ss_dssp TTEEEEEETTTT----------------EEEEEEE-CSSC--EEEEEE-CSSEEEEEETTEEEEEESSTTCCBSSCCEEE
T ss_pred ccEEEEEECCCC----------------cEEEEEE-CCCc--eEEEEE-cCCEEEEEEcCEEEEEECCCCceeeEEeccC
Confidence 889999999876 2333332 1111 333332 2211
Q ss_pred --------cEEEE--ecCCCeEEEEecCCCc----------------eEEEEecccccceEeEEcCCCCeEEEEecCCc-
Q 023246 134 --------EYVMS--GSDCGHLFIWKKKGGK----------------LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKT- 186 (285)
Q Consensus 134 --------~~l~~--~~~dg~v~vwd~~~~~----------------~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~- 186 (285)
.+++. |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|++
T Consensus 140 ~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 140 GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 34444 6889999999998765 26788999999999999999999999999998
Q ss_pred EEEEcCCCCC-CCCCC-C-CcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 187 VKLWAPMPTD-FPPLP-D-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 187 i~iwd~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
|++||+++++ +..+. + |...+..+.+ .+++.++++++.|+.|++||+...
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~-s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKW-STDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEE-CTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEE-CCCCCEEEEEECCCEEEEEEccCC
Confidence 9999998776 45555 4 6777766655 567789999999999999999765
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-27 Score=215.40 Aligned_cols=228 Identities=12% Similarity=0.071 Sum_probs=154.4
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~~ 83 (285)
.+.+++|+|++ ++||+|+.|++|++||+.++..... ..+..-....+..+|...|++++|+|++++||+++ |++
T Consensus 437 ~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~----~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt 511 (902)
T 2oaj_A 437 TKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDIQDN----ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD 511 (902)
T ss_dssp CCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTTTTT----BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcccccccC-cEEEEecCCCcEEEEECCCccccCC----ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE
Confidence 45667889975 8999999999999999998742100 00000000111237899999999999999999965 999
Q ss_pred EEEEEcCCCCCC--------CCCCCCC--ccc-------------------cCCCCceEeecccCceeeeeEEEecCCCc
Q 023246 84 VYLFEKNMGLGP--------SPLSLSP--EDL-------------------QKREEPQVYSGHRNSQTVKGVNFFGPNDE 134 (285)
Q Consensus 84 i~iwd~~~~~~~--------~~~~~~~--~~~-------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 134 (285)
|+||++.++... ....+.. ..+ ...+++..+.+|... |++++| +|+|
T Consensus 512 V~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~--V~svaf-SpdG- 587 (902)
T 2oaj_A 512 VVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK--TSAINN-SNIG- 587 (902)
T ss_dssp EEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS--EEEEEE-CBTS-
T ss_pred EEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc--EEEEEe-cCCc-
Confidence 999999765210 0000000 000 001235677788876 999997 9999
Q ss_pred EEEEecCCCeEEEEecCCCceEEE-----Ee-cccccceEeEEc-----CCC---CeEEEEecCCcEEEEcC---CCCC-
Q 023246 135 YVMSGSDCGHLFIWKKKGGKLVRL-----MV-GDRHVVNQLEPH-----PHI---PMFATCGIEKTVKLWAP---MPTD- 196 (285)
Q Consensus 135 ~l~~~~~dg~v~vwd~~~~~~~~~-----~~-~h~~~v~~~~~~-----p~~---~~l~t~~~d~~i~iwd~---~~~~- 196 (285)
+|++|+.|++|++||++++..+.. +. +|...|++++|+ ||+ ++|++++.|++|++||+ .++.
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~ 667 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKF 667 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCE
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcE
Confidence 999999999999999987776642 22 788999999999 886 78999999999999998 4443
Q ss_pred CCCCCCC-----cccceeecccc---------------------CCCceEEEeCCCCeEEEEEeccccccee
Q 023246 197 FPPLPDN-----AEKIMKANKQG---------------------REDHSRITLTPDVIMHVLRLQRRQTLAY 242 (285)
Q Consensus 197 ~~~~~~~-----~~~~~~~~~~~---------------------~~~~~~~~~s~d~~i~vwd~~~~~~~~~ 242 (285)
..++.+| ...++.+.... ..+..+++.+ +..+++|++.+.+...+
T Consensus 668 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~~~k 738 (902)
T 2oaj_A 668 DVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKSTHK 738 (902)
T ss_dssp EEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCEEEE
T ss_pred EEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccceee
Confidence 2333333 23343332111 0123444444 88999999987655433
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=4.3e-27 Score=192.05 Aligned_cols=162 Identities=9% Similarity=0.086 Sum_probs=130.9
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d 81 (285)
..+|.+++|+|++ .+|++++. +.+++|+..+++. ........|...|.+++|+|+++++++++ |
T Consensus 176 ~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~-------------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d 240 (365)
T 4h5i_A 176 RGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSC-------------IARKTDFDKNWSLSKINFIADDTVLIAASLK 240 (365)
T ss_dssp SSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCE-------------EEEECCCCTTEEEEEEEEEETTEEEEEEEES
T ss_pred CCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcc-------------eeeeecCCCCCCEEEEEEcCCCCEEEEEecC
Confidence 4579999999986 89988885 5667777776652 22233367899999999999999888854 5
Q ss_pred C----cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 82 E----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 82 ~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
+ .+++|++.... ........+.+|... |.+++| +|++++|++|+.|+.|++||+++++++.
T Consensus 241 ~~~~~~i~~~~~~~~~------------~~~~~~~~~~~~~~~--V~~~~~-Spdg~~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGN------------TSVLRSKQVTNRFKG--ITSMDV-DMKGELAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp SSCCEEEEEEEEETTE------------EEEEEEEEEESSCSC--EEEEEE-CTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CcceeEEeecccccce------------ecceeeeeecCCCCC--eEeEEE-CCCCCceEEEcCCCEEEEEECCCCcEEE
Confidence 5 68888886541 000123456677765 999997 9999999999999999999999999998
Q ss_pred EE-ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCC
Q 023246 158 LM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 158 ~~-~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 194 (285)
.+ .+|...|++|+|+|++++|++++.|++|+||++..
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 85 68999999999999999999999999999999854
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=5.4e-26 Score=181.74 Aligned_cols=217 Identities=17% Similarity=0.271 Sum_probs=164.1
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCC-ccc-------------------------cccccc
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTP-VDT-------------------------FCPRHL 56 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~ 56 (285)
...|++++|+|++ ++|++|+.||+|++||+.+++.+........ +.. ......
T Consensus 67 ~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 67 GEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE
Confidence 4569999999985 8999999999999999998876544322110 000 011122
Q ss_pred CCCCCcceEEEEEecCCCEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-
Q 023246 57 IGKNNIHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE- 134 (285)
Q Consensus 57 ~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~- 134 (285)
..+|...+..+.+++++++|+++ .|+.|++||+.++.. ..........+... +..+.+ .+.+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------~~~~~~~~~~~~~~--v~~~~~-~~~~~~ 210 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG------------GWVPLQTFTQHQGA--VKAVAW-CPWQSN 210 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT------------BSCCSEEECCCCSC--EEEEEE-CTTSTT
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc------------cccceeeecccCCc--eEEEEe-cCCCCc
Confidence 35788999999999999999986 599999999987620 11233444455544 888887 66554
Q ss_pred E--EEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe--cCCcEEEEcCCCCC-CCCCCCCccccee
Q 023246 135 Y--VMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG--IEKTVKLWAPMPTD-FPPLPDNAEKIMK 209 (285)
Q Consensus 135 ~--l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~--~d~~i~iwd~~~~~-~~~~~~~~~~~~~ 209 (285)
. +++++.++.|++||.+......... +...+..+.|+|++..+++++ .|+.|++||+++++ +..+.+|...+..
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 3 3467889999999999887766554 667899999999999877654 79999999998776 4678889888877
Q ss_pred eccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 210 ANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 210 ~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+.+ .+++.++++++.|++|++||+.+.
T Consensus 290 l~~-spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 LTM-SPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEE-CTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEE-cCCCCEEEEEecCCeEEEEECCCC
Confidence 765 556779999999999999998653
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.7e-25 Score=181.95 Aligned_cols=214 Identities=16% Similarity=0.137 Sum_probs=146.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 84 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i 84 (285)
.+..+++.+++..++++|+.|++|++||+.+++.+..+. |...|.+++|+++ .++.+.++.|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~----------------~~~~v~~v~~~~~--~~~~~~~~~i 121 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK----------------VDAPVKDLFLSRE--FIVVSYGDVI 121 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE----------------CSSCEEEEEECSS--EEEEEETTEE
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE----------------CCCceEEEEEcCC--EEEEEEcCEE
Confidence 466788888753444778889999999999887433221 3345666666554 2223334445
Q ss_pred EEEEcCCC-C-----------------------CCCCCCCCCccccCCC---------------C-ceEeecccCceeee
Q 023246 85 YLFEKNMG-L-----------------------GPSPLSLSPEDLQKRE---------------E-PQVYSGHRNSQTVK 124 (285)
Q Consensus 85 ~iwd~~~~-~-----------------------~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~i~ 124 (285)
++||+... . +.....+..+++.... . +..+.+|... |.
T Consensus 122 ~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~--v~ 199 (355)
T 3vu4_A 122 SVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP--IK 199 (355)
T ss_dssp EEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC--EE
T ss_pred EEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc--eE
Confidence 55554433 0 0111112222222211 2 6788899877 99
Q ss_pred eEEEecCCCcEEEEecCCCe-EEEEecCCCceEEEEe-c-ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCC---
Q 023246 125 GVNFFGPNDEYVMSGSDCGH-LFIWKKKGGKLVRLMV-G-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP--- 198 (285)
Q Consensus 125 ~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~-~-h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~--- 198 (285)
+++| +|++++|++|+.|++ |++||+++++++..+. + |...|.+++|+|++++|++++.|++|++||++.....
T Consensus 200 ~~~~-s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~ 278 (355)
T 3vu4_A 200 MVRL-NRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH 278 (355)
T ss_dssp EEEE-CTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred EEEE-CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc
Confidence 9997 999999999999998 9999999999999998 5 9999999999999999999999999999999654311
Q ss_pred CCCC--------------------CcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 199 PLPD--------------------NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 199 ~~~~--------------------~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
.+.. ..........+.+++..+++++.||.+++|++.....
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 1111 0000002223455677899999999999999887543
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1e-26 Score=183.19 Aligned_cols=154 Identities=8% Similarity=0.006 Sum_probs=115.6
Q ss_pred cceeEEEEcC--CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCC--CCcceEEEEEecCCCEE---
Q 023246 4 IRLNAIVIDP--RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK--NNIHITGLAYSNTSELL--- 76 (285)
Q Consensus 4 ~~v~~~~~s~--~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~i~~s~~~~~l--- 76 (285)
..+..++|+| .++.+|++|+.|++|+|||+.++++ ...+..+ |...+.+++|+|+|.++
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~--------------l~tL~g~~~~v~~v~~vafSpdG~~lvs~ 244 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL--------------LKKMHIDDSYQASVCHKAYSEMGLLFIVL 244 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE--------------EEEEECCC---CCCEEEEEEETTEEEEEE
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE--------------EEEEcCCCcceeeeEEEEECCCCCEEEEe
Confidence 3456667776 1247899999999999999999983 3333122 23478888999999876
Q ss_pred ---------EEec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe-----ecccCceeeeeEEEecCCCcEEEEecC
Q 023246 77 ---------ISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTVKGVNFFGPNDEYVMSGSD 141 (285)
Q Consensus 77 ---------~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~~l~~~~~ 141 (285)
++++ |++|++||..++ +.+..+ .+|... +.+..+ ++.++++++.
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tg----------------k~l~v~~~~~p~Gh~~~--~lsg~~---sg~~lASgS~ 303 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTT----------------LSVGVMLYCLPPGQAGR--FLEGDV---KDHCAAAILT 303 (356)
T ss_dssp C------------CCEEEEEEETTTT----------------EEEEEEEECCCTTCCCC--EEEEEE---ETTEEEEEET
T ss_pred ccCCCcceeeccCCCcEEEEEECCCC----------------EEEEEEEeeccCCCcce--eEcccc---CCCEEEEEcC
Confidence 4444 899999999877 454444 244432 334443 3789999999
Q ss_pred CCeEEEEecCCCceEEEEecccccce-EeEEcCCCCeEEEEecCCcEEEEcC
Q 023246 142 CGHLFIWKKKGGKLVRLMVGDRHVVN-QLEPHPHIPMFATCGIEKTVKLWAP 192 (285)
Q Consensus 142 dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~t~~~d~~i~iwd~ 192 (285)
|++|++||+.+++++.++.+|...+. .++|+|++++|++|+.|++|++||+
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999999987665 5899999999999999999999985
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=4.1e-26 Score=185.79 Aligned_cols=198 Identities=11% Similarity=0.065 Sum_probs=150.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEE--ecCCCEEEEe-
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY--SNTSELLISY- 79 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~--s~~~~~l~s~- 79 (285)
..+|++++|+|++ .+|++|+.||.|++||+.+++. .. ...|...|++++| +|++.+|+++
T Consensus 86 ~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~--------------~~--~~~~~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 86 TGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQA--------------IQ--IAQHDAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE--------------EE--EEECSSCEEEEEEEECSSCEEEEEEE
T ss_pred cCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCc--------------ee--eccccCceEEEEEEeCCCCCEEEEcc
Confidence 5689999999975 8999999999999999998762 11 1468999999999 8888888885
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC---------------------------------------c
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---------------------------------------S 120 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~ 120 (285)
.|+.|++||+.++. .+..+..+.. .
T Consensus 149 ~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 212 (368)
T 3mmy_A 149 WDKTLKFWDTRSSN----------------PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLK 212 (368)
T ss_dssp TTSEEEEECSSCSS----------------CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCS
T ss_pred CCCcEEEEECCCCc----------------EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccccc
Confidence 59999999998762 2222222110 0
Q ss_pred eeeeeEEEecCCC----cEEEEecCCCeEEEEecCCC---ceEEEEecccc------------cceEeEEcCCCCeEEEE
Q 023246 121 QTVKGVNFFGPND----EYVMSGSDCGHLFIWKKKGG---KLVRLMVGDRH------------VVNQLEPHPHIPMFATC 181 (285)
Q Consensus 121 ~~i~~~~~~~~~~----~~l~~~~~dg~v~vwd~~~~---~~~~~~~~h~~------------~v~~~~~~p~~~~l~t~ 181 (285)
.....+.+ .++. ..+++++.||.|++||++.. +.+..+..|.. .|.+++|+|++++|+++
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 291 (368)
T 3mmy_A 213 HQHRCVAI-FKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV 291 (368)
T ss_dssp SCEEEEEE-EECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE
T ss_pred CCCceEEE-cccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE
Confidence 11333333 2222 23999999999999999877 55677777776 79999999999999999
Q ss_pred ecCCcEEEEcCCCCC-CCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 182 GIEKTVKLWAPMPTD-FPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 182 ~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
+.||.|++||++.++ +..+..|...+..+.+ .+++.++++++.|+..+.|++.
T Consensus 292 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 292 GSDGRFSFWDKDARTKLKTSEQLDQPISACCF-NHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ETTSCEEEEETTTTEEEEECCCCSSCEEEEEE-CTTSSCEEEEECCCSTTCGGGC
T ss_pred ccCCeEEEEECCCCcEEEEecCCCCCceEEEE-CCCCCeEEEEeccccccccccc
Confidence 999999999998775 4667777777766655 5667788999888755555443
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=4e-26 Score=188.25 Aligned_cols=215 Identities=12% Similarity=0.035 Sum_probs=136.2
Q ss_pred ccceeEEEEcC--------CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC
Q 023246 3 SIRLNAIVIDP--------RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE 74 (285)
Q Consensus 3 ~~~v~~~~~s~--------~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~ 74 (285)
...|++++|+| + +++||+|+.|++|+|||+.++. +.... ..|..+|.+++|+|++.
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d-~~~las~s~D~tv~~Wd~~~~~--------------~~~~~-~~~~~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLA-EQVIASVGDDCTLIIWRLTDEG--------------PILAG-YPLSSPGISVQFRPSNP 199 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEE-EEEEEEEETTSEEEEEEEETTE--------------EEEEE-EECSSCEEEEEEETTEE
T ss_pred CCceEEEEEccccccccCCC-CCEEEEEECCCeEEEEECCCCc--------------eeeee-cCCCCCcEEEEECCCCC
Confidence 46899999997 4 3899999999999999998765 22222 56788999999999885
Q ss_pred -EEEEe-cCCcEEEEEcCCCCCCCCCCCCCcc---------ccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCC
Q 023246 75 -LLISY-NDELVYLFEKNMGLGPSPLSLSPED---------LQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG 143 (285)
Q Consensus 75 -~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 143 (285)
+|+++ .|++|++||+.++............ ...........+|... +.++.|+.++++.+++++.|+
T Consensus 200 ~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~--v~~v~~~~~dg~~l~s~s~d~ 277 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS--LANVRWIGSDGSGILAMCKSG 277 (393)
T ss_dssp EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS--CSEEEEETTTTCEEEEECTTS
T ss_pred ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc--ceeeeeecCCCCEEEEEeCCC
Confidence 77775 5999999999876311110000000 0000111122355544 889998679999999999999
Q ss_pred eEEEEecCCCceEEEEecccccceEeEE------------------cC--CCCeEEEEecCCcEEEEcCCCCCC-CCCCC
Q 023246 144 HLFIWKKKGGKLVRLMVGDRHVVNQLEP------------------HP--HIPMFATCGIEKTVKLWAPMPTDF-PPLPD 202 (285)
Q Consensus 144 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~------------------~p--~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~ 202 (285)
.+++||+..++....+..|...+..+.+ +| ++.++++++.||+|++||+..+.. ..+..
T Consensus 278 ~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~ 357 (393)
T 4gq1_A 278 AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ 357 (393)
T ss_dssp EEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE
T ss_pred CEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC
Confidence 9999999988776666555544444333 33 233577888999999999987764 44555
Q ss_pred CcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 203 NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+...+..+.| .++++++++++.+ .+.+|++...
T Consensus 358 ~~~~V~svaf-spdG~~LA~as~~-Gv~lvrL~gf 390 (393)
T 4gq1_A 358 LGMPIVDFCW-HQDGSHLAIATEG-SVLLTRLMGF 390 (393)
T ss_dssp CSSCEEEEEE-CTTSSEEEEEESS-EEEEEEEGGG
T ss_pred CCCcEEEEEE-cCCCCEEEEEeCC-CeEEEEEeCc
Confidence 6677766655 6677788887755 4777776543
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1.3e-24 Score=178.95 Aligned_cols=228 Identities=6% Similarity=0.004 Sum_probs=165.9
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ec-C
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-D 81 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~-d 81 (285)
..+.+++|+|++..++++++.|+.|++||+.+++.. ..+ ..+ ..+.+++|+|++++|+. +. +
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--------------~~~-~~~-~~v~~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--------------ATV-PAG-SSPQGVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--------------EEE-ECS-SSEEEEEECTTSSEEEEEETTT
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--------------EEE-ECC-CCccceEECCCCCEEEEEECCC
Confidence 357899999987445578889999999999988632 222 222 38999999999997654 54 7
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE-EEecCCCeEEEEecCCCceEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
+.|++||+.++ +.+..+..+. . +.+++| +|+++++ ++++.++.|++||+.+++.+..+.
T Consensus 96 ~~v~v~d~~~~----------------~~~~~~~~~~-~--~~~~~~-s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 96 STLSVIDTTSN----------------TVAGTVKTGK-S--PLGLAL-SPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp TEEEEEETTTT----------------EEEEEEECSS-S--EEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCC----------------eEEEEEeCCC-C--cceEEE-CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 99999999887 5666666543 2 788997 9999877 788889999999999999988887
Q ss_pred cccccceEeEEcCCCCeE-EEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeC---CCCeEEEEEecc
Q 023246 161 GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT---PDVIMHVLRLQR 236 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~d~~i~vwd~~~ 236 (285)
.| ..+..++|+|+++++ ++++.|+.|++||++.++......+...+..+.+ .++++++++++ .++.|++||+.+
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV-NPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE-CTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE-CCCCCEEEEEecCcCCCcEEEEECCC
Confidence 65 457999999999986 6777899999999988764332223334444433 44555666665 789999999987
Q ss_pred cccceeE---------eeecccccc-CCCCCcCeEEEeecCCC
Q 023246 237 RQTLAYR---------ERRYNAADF-ESDEEEGETYLLGFSDS 269 (285)
Q Consensus 237 ~~~~~~~---------~~~~~~~~~-~~~~~~~~v~~~~~~~~ 269 (285)
.+.+..+ .+.+++..+ .....++.+.+++...+
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 234 NKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp TEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 6554443 334444444 33345566777776654
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=7.3e-25 Score=182.74 Aligned_cols=208 Identities=11% Similarity=-0.021 Sum_probs=160.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~~ 83 (285)
.+.+++|+| ++.++++++.++.|++||+.+++.... .......+|...|.+++|++++++++++. |+.
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRL----------SPPEKYKKKLGFVETISIPEHNELWVSQMQANA 192 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEE----------CCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTE
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeee----------cCcccccccCCceeEEEEcCCCEEEEEECCCCE
Confidence 466899999 558899999999999999998863211 11111257888999999999999998865 899
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE-EEecCCCeEEEEecCCCceEEEEecc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLMVGD 162 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~h 162 (285)
|++||+.++ +.+..+..|... +.+++| +|+++++ ++++.++.|++||+++++.+..+..+
T Consensus 193 v~~~d~~~~----------------~~~~~~~~~~~~--~~~~~~-~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 193 VHVFDLKTL----------------AYKATVDLTGKW--SKILLY-DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp EEEEETTTC----------------CEEEEEECSSSS--EEEEEE-ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred EEEEECCCc----------------eEEEEEcCCCCC--eeEEEE-cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 999999877 677777777765 999997 8999877 45668999999999999988887754
Q ss_pred cccceEeEEcCCCCeEEEEe--------cCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 163 RHVVNQLEPHPHIPMFATCG--------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 163 ~~~v~~~~~~p~~~~l~t~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
..+.+++|+|+++++++++ .|+.|++||+++++......+...+..+.+......++++++.++.|++||+
T Consensus 254 -~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 254 -GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp -SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred -CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 4699999999999988888 4889999999877653333334444444443323346778899999999999
Q ss_pred cccccceeE
Q 023246 235 QRRQTLAYR 243 (285)
Q Consensus 235 ~~~~~~~~~ 243 (285)
.+++....+
T Consensus 333 ~~~~~~~~~ 341 (433)
T 3bws_A 333 KEKKVQKSI 341 (433)
T ss_dssp TTTEEEEEE
T ss_pred CCCcEEEEe
Confidence 877655444
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=1.2e-23 Score=173.17 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=151.6
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE-EEec-C
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL-ISYN-D 81 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l-~s~~-d 81 (285)
..+.+++|+|++..++++++.++.|++||+.+++.. ..+ . +...+.+++|+|+++.+ +++. +
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~--------------~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA--------------GTV-K-TGKSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE--------------EEE-E-CSSSEEEEEECTTSSEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE--------------EEE-e-CCCCcceEEECCCCCEEEEEeCCC
Confidence 378899999987445566677899999999987632 111 2 23468999999999966 5654 9
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE-EEecCCCeEEEEecCCCceEEEEe
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
+.|++||+.++ +....+..+.. +..++| +|+++++ ++++.++.|++||+++++.+..+.
T Consensus 138 ~~v~~~d~~~~----------------~~~~~~~~~~~---~~~~~~-~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 138 KTVSVINTVTK----------------AVINTVSVGRS---PKGIAV-TPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp TEEEEEETTTT----------------EEEEEEECCSS---EEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCC----------------cEEEEEecCCC---cceEEE-CCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 99999999877 56666665543 688887 9999877 678889999999999998887776
Q ss_pred cccccceEeEEcCCCCeEEEEe---cCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCc-eEEEeCCCCeEEEEEec
Q 023246 161 GDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~---~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~s~d~~i~vwd~~ 235 (285)
+...+.+++|+|+++++++++ .++.|++||++.++. ..+..+. .+..+.+ .++++ ++++++.|+.|++||+.
T Consensus 198 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~-s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAV-TPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEE-CTTSSEEEEEETTTTEEEEEETT
T ss_pred -cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEE-ccCCCEEEEEcCCCCEEEEEECC
Confidence 456889999999999988887 689999999987653 3333332 2334433 34444 45788999999999998
Q ss_pred ccccceeE
Q 023246 236 RRQTLAYR 243 (285)
Q Consensus 236 ~~~~~~~~ 243 (285)
+++.+..+
T Consensus 275 ~~~~~~~~ 282 (391)
T 1l0q_A 275 TNTITATM 282 (391)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEE
Confidence 87655443
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=3.3e-24 Score=178.60 Aligned_cols=224 Identities=13% Similarity=0.092 Sum_probs=150.1
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcC-CCCCcccccccccCCCCCcceEEEEEecCCCEEE---
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPIS-SDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI--- 77 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~--- 77 (285)
+...++.+++++++ .++++++.++ +++|+........... ....+..+..... ..|...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 35 PKERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CCSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEE
Confidence 44568899999975 7888898888 9999875321110000 0011111111111 24567899999999999888
Q ss_pred -Eec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-CcEEEEecCCCeEEEEecCCCc
Q 023246 78 -SYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 78 -s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
+++ |+.|++||+.+...... ...........+.+|... |.+++| +|+ ++++++++.||+|++||++++.
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~h~~~--V~~v~~-~p~~~~~las~s~Dg~v~iwD~~~~~ 183 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAK-----QQKRPFAYHKLLKDAGGM--VIDMKW-NPTVPSMVAVCLADGSIAVLQVTETV 183 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTC-----SSCCCSEEEECCCSGGGS--EEEEEE-CSSCTTEEEEEETTSCEEEEEESSSE
T ss_pred eccCCCceEEEEEccccccCCc-----CCcceeeeeeccCCCCCc--eEEEEE-CCCCCCEEEEEECCCeEEEEEcCCCc
Confidence 654 99999999865310000 000000123445567766 999997 887 8899999999999999999887
Q ss_pred eEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCC-------CCcccceeeccccCCCceEE-EeCCC
Q 023246 155 LVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-------DNAEKIMKANKQGREDHSRI-TLTPD 226 (285)
Q Consensus 155 ~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~s~d 226 (285)
.+....+|...|.+++|+|++++|++++.||+|++||++......+. .|...+..+.|.. ...+++ ..+.+
T Consensus 184 ~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~d 262 (434)
T 2oit_A 184 KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAAD 262 (434)
T ss_dssp EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETT
T ss_pred ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCC
Confidence 77777788999999999999999999999999999999833222121 1223566666643 333333 23334
Q ss_pred C------eEEEEEeccc
Q 023246 227 V------IMHVLRLQRR 237 (285)
Q Consensus 227 ~------~i~vwd~~~~ 237 (285)
| .+++|++++.
T Consensus 263 g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 263 GTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCSSSCCEEEEEECCCT
T ss_pred CccCCCCceEEEEeccC
Confidence 2 4899999865
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=2e-23 Score=174.05 Aligned_cols=204 Identities=10% Similarity=0.061 Sum_probs=153.6
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE-Ee-c
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-N 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~-s~-~ 80 (285)
...|++++|+|++ .++++++.|+.|++||+.+++. ...+ ..|...+.+++|+|+++.++ ++ .
T Consensus 169 ~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (433)
T 3bws_A 169 LGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAY--------------KATV-DLTGKWSKILLYDPIRDLVYCSNWI 232 (433)
T ss_dssp CCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCE--------------EEEE-ECSSSSEEEEEEETTTTEEEEEETT
T ss_pred CCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceE--------------EEEE-cCCCCCeeEEEEcCCCCEEEEEecC
Confidence 3478999999975 8999999999999999987762 2222 46788999999999998764 55 4
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec--------CCCeEEEEecCC
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--------DCGHLFIWKKKG 152 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--------~dg~v~vwd~~~ 152 (285)
++.|++||+.++ +.+..+..+. .+.+++| +|+++++++++ .|+.|++||+.+
T Consensus 233 ~~~i~~~d~~~~----------------~~~~~~~~~~---~~~~~~~-~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 233 SEDISVIDRKTK----------------LEIRKTDKIG---LPRGLLL-SKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp TTEEEEEETTTT----------------EEEEECCCCS---EEEEEEE-CTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred CCcEEEEECCCC----------------cEEEEecCCC---CceEEEE-cCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 899999999876 4555555432 2889997 99999998887 589999999998
Q ss_pred CceEEEEecccccceEeEEcCCCCe-EEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCC------
Q 023246 153 GKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTP------ 225 (285)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~------ 225 (285)
++.+..+ .|...+.+++|+|+++. +++++.|+.|++||+++++......+...+..+.+ .++++++++++.
T Consensus 293 ~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~ 370 (433)
T 3bws_A 293 EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIAL-SPDGKYLYVSCRGPNHPT 370 (433)
T ss_dssp TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEE-CTTSSEEEEEECCCCCTT
T ss_pred CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEE-cCCCCEEEEEecCCCccc
Confidence 8877665 35668999999999976 56778999999999987654222223344444433 344555555444
Q ss_pred ---------CCeEEEEEecccccceeEe
Q 023246 226 ---------DVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 226 ---------d~~i~vwd~~~~~~~~~~~ 244 (285)
||.|++||+.+.+.+..+.
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred cccccccccceEEEEEECCCCcEEEEec
Confidence 5799999998876655543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=7.5e-22 Score=163.72 Aligned_cols=195 Identities=10% Similarity=0.081 Sum_probs=147.4
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCC---cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE-E
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDE---YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-S 78 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~-s 78 (285)
...|.+++|+|++ .+|++++.++ .|++||+.+++. . .+ ..|...+.+++|+|+|+.|+ +
T Consensus 178 ~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~--------------~-~l-~~~~~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 178 PQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAV--------------R-QV-ASFPRHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp SSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE--------------E-EE-ECCSSCEEEEEECTTSSEEEEE
T ss_pred CCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcE--------------E-Ee-ecCCCcccCEEEcCCCCEEEEE
Confidence 3578999999986 8899988875 999999998762 1 11 45677899999999999777 4
Q ss_pred ec-CC--cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC-CC--eEEEEecCC
Q 023246 79 YN-DE--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CG--HLFIWKKKG 152 (285)
Q Consensus 79 ~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg--~v~vwd~~~ 152 (285)
++ ++ .|++||+.++ ....+..+... +.+++| +|++++|+.++. ++ .|++||+.+
T Consensus 241 ~~~~g~~~i~~~d~~~~-----------------~~~~l~~~~~~--~~~~~~-spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASG-----------------QIRQVTDGRSN--NTEPTW-FPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp ECTTSSCEEEEEETTTC-----------------CEEECCCCSSC--EEEEEE-CTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred EecCCCceEEEEECCCC-----------------CEEeCcCCCCc--ccceEE-CCCCCEEEEEECCCCCcEEEEEECCC
Confidence 43 44 5999999876 33566666655 889996 999999888775 44 788889987
Q ss_pred CceEEEEecccccceEeEEcCCCCeEEEEecC---CcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCC--
Q 023246 153 GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE---KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV-- 227 (285)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~-- 227 (285)
++. ..+..|...+..++|+|++++|++++.+ ..|++||+.++....+..+. .+....+ .++++.++.++.++
T Consensus 301 ~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~-spdg~~l~~~s~~~~~ 377 (415)
T 2hqs_A 301 GAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSL-APNGTMVIYSSSQGMG 377 (415)
T ss_dssp SCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEE-CTTSSEEEEEEEETTE
T ss_pred CCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEE-cCCCCEEEEEEcCCCc
Confidence 764 3455577789999999999998888764 58999999888765555443 4444443 55666777777665
Q ss_pred -eEEEEEeccc
Q 023246 228 -IMHVLRLQRR 237 (285)
Q Consensus 228 -~i~vwd~~~~ 237 (285)
.|++||+..+
T Consensus 378 ~~l~~~d~~g~ 388 (415)
T 2hqs_A 378 SVLNLVSTDGR 388 (415)
T ss_dssp EEEEEEETTSC
T ss_pred cEEEEEECCCC
Confidence 7999998654
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.3e-21 Score=163.03 Aligned_cols=167 Identities=8% Similarity=0.063 Sum_probs=124.9
Q ss_pred cceeEEEEcCCCCcEEE----EeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC-CCEEEE
Q 023246 4 IRLNAIVIDPRNPNYFA----VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELLIS 78 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~----tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~-~~~l~s 78 (285)
.+|++++|+|++ .+|+ +|+.|++|+|||+.++.... ......+.......+|...|.+++|+|+ +.+|++
T Consensus 93 ~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 93 FPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEA----KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp SCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTT----CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCC----cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 369999999986 7888 88999999999997641000 0000000112334679999999999998 678888
Q ss_pred e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 79 Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 79 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
+ .|++|++||++++ .......+|... +.+++| +|++++|++|+.||.|++||++ ++...
T Consensus 168 ~s~Dg~v~iwD~~~~----------------~~~~~~~~~~~~--v~~v~w-spdg~~lasgs~dg~v~iwd~~-~~~~~ 227 (434)
T 2oit_A 168 CLADGSIAVLQVTET----------------VKVCATLPSTVA--VTSVCW-SPKGKQLAVGKQNGTVVQYLPT-LQEKK 227 (434)
T ss_dssp EETTSCEEEEEESSS----------------EEEEEEECGGGC--EEEEEE-CTTSSCEEEEETTSCEEEECTT-CCEEE
T ss_pred EECCCeEEEEEcCCC----------------cceeeccCCCCc--eeEEEE-cCCCCEEEEEcCCCcEEEEccC-Ccccc
Confidence 5 5999999999876 344455567655 999996 9999999999999999999998 66666
Q ss_pred EEeccc-------ccceEeEEcCCCCeEEE-EecCC------cEEEEcCCCC
Q 023246 158 LMVGDR-------HVVNQLEPHPHIPMFAT-CGIEK------TVKLWAPMPT 195 (285)
Q Consensus 158 ~~~~h~-------~~v~~~~~~p~~~~l~t-~~~d~------~i~iwd~~~~ 195 (285)
.+..|. ..|.+++|++++.++++ ...|| .+++|+++..
T Consensus 228 ~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 228 VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 665442 37999999998877644 33443 3899998654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=1.2e-20 Score=156.61 Aligned_cols=219 Identities=11% Similarity=0.034 Sum_probs=154.3
Q ss_pred cEEEEeeCC------CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C---CcEEE
Q 023246 17 NYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D---ELVYL 86 (285)
Q Consensus 17 ~~l~tg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d---~~i~i 86 (285)
..++.++.+ +.|++||+..+. ...+ .+|...+.+++|+|+|++|++++ + ..|++
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~---------------~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~ 207 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYN---------------QFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVI 207 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCS---------------CEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCC---------------CEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEE
Confidence 455555543 799999997432 2222 56788999999999999888854 5 48999
Q ss_pred EEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEE-EecCCC--eEEEEecCCCceEEEEeccc
Q 023246 87 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCG--HLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 87 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg--~v~vwd~~~~~~~~~~~~h~ 163 (285)
||+.++ +. ..+..+... +.+++| +|++++|+ +++.++ .|++||+.+++. ..+..|.
T Consensus 208 ~d~~tg----------------~~-~~l~~~~~~--~~~~~~-spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~ 266 (415)
T 2hqs_A 208 QTLANG----------------AV-RQVASFPRH--NGAPAF-SPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGR 266 (415)
T ss_dssp EETTTC----------------CE-EEEECCSSC--EEEEEE-CTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCS
T ss_pred EECCCC----------------cE-EEeecCCCc--ccCEEE-cCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCC
Confidence 999876 33 456666655 899997 99999887 666655 499999998766 5677788
Q ss_pred ccceEeEEcCCCCeEEEEec-CC--cEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCC---CeEEEEEeccc
Q 023246 164 HVVNQLEPHPHIPMFATCGI-EK--TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD---VIMHVLRLQRR 237 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---~~i~vwd~~~~ 237 (285)
..+.+++|+|++++|++++. ++ .|.+||+.+++...+..+...+....+ ++++++++.++.+ ..|++||+.++
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~-spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADV-SSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEE-CTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEE-CCCCCEEEEEECcCCceEEEEEECCCC
Confidence 89999999999999888875 44 678889988776555545445544443 5566666666553 68999999875
Q ss_pred ccc--------eeEeeeccccccCCCCCcC---eEEEeecCCCCCCC
Q 023246 238 QTL--------AYRERRYNAADFESDEEEG---ETYLLGFSDSDASS 273 (285)
Q Consensus 238 ~~~--------~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 273 (285)
+.. ....++|++..+.....++ .+|+++...+....
T Consensus 346 ~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 346 GVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp CEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred CEEEecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 432 1224566666555444333 68888876554433
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=7e-20 Score=144.33 Aligned_cols=230 Identities=7% Similarity=-0.004 Sum_probs=153.2
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccC-CcccCCcCCCCCcccccccccCCCC-CcceEEEEEecCCCEEEEec
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRK-CHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYSNTSELLISYN 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~s~~~~~l~s~~ 80 (285)
...|.+++|+|++ .+|++++ ++.|++||+.+ ++.. ... ..| ...+.+++|+|++++|+++.
T Consensus 41 ~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~--------------~~~-~~~~~~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 41 PELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPE--------------KVD-TGFATICNNDHGISPDGALYAISD 103 (297)
T ss_dssp SSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCE--------------ECC-CTTCCCBCSCCEECTTSSEEEEEE
T ss_pred CcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCce--------------Eec-cccccccccceEECCCCCEEEEEE
Confidence 3568999999986 7888876 78999999998 6521 111 233 46788999999999888753
Q ss_pred ---CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEE-EecCCCeEEEEecCC-Cce
Q 023246 81 ---DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVM-SGSDCGHLFIWKKKG-GKL 155 (285)
Q Consensus 81 ---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~v~vwd~~~-~~~ 155 (285)
++...||.+.... .....+..+. . +..++| +|++++++ ++..++.+.+|+++. +..
T Consensus 104 ~~~~~~~~l~~~~~~~---------------~~~~~~~~~~-~--~~~~~~-spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 104 KVEFGKSAIYLLPSTG---------------GTPRLMTKNL-P--SYWHGW-SPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp CTTTSSCEEEEEETTC---------------CCCEECCSSS-S--EEEEEE-CTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred eCCCCcceEEEEECCC---------------CceEEeecCC-C--ccceEE-CCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 3455555543220 1334443333 2 777886 99999877 788899999998532 334
Q ss_pred EEEEecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCC--CCCCCCCCCCcccceeeccccCCCceEEEeCCC------
Q 023246 156 VRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPM--PTDFPPLPDNAEKIMKANKQGREDHSRITLTPD------ 226 (285)
Q Consensus 156 ~~~~~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d------ 226 (285)
...+..|...+.+++|+|++++|+.++ .++.+++|++. ......+..+...+....+ .+++++++.++.+
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP-SPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE-CTTSSEEEEEEEETTCCSC
T ss_pred ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEE-CCCCCEEEEEEcCCCCCcc
Confidence 556667788899999999999877666 58899999874 3444555555555444443 4566666666554
Q ss_pred -----CeEEEEEecccccceeEee---eccccccCCCCCcCeEEEeecCCC
Q 023246 227 -----VIMHVLRLQRRQTLAYRER---RYNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 227 -----~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
+.|++||+.+++....... ......+...++...+++...+++
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred cccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 5799999988755433322 223444555666655666554443
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=6.1e-20 Score=148.72 Aligned_cols=239 Identities=6% Similarity=0.021 Sum_probs=163.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-e--cC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y--ND 81 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~--~d 81 (285)
.+.+++|+|++..++++...++.|.+||..+++....+....... ........+.+++|+|++++++. + .+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR------TEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC------CSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc------ccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 466899999874466677778999999999887432221110000 00001123788999999986655 3 27
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|.+||..++ +....+..+... +..++| +|+++++++++.++.|.+||+.+++.+..+..
T Consensus 164 ~~i~~~d~~~~----------------~~~~~~~~~~~~--~~~~~~-s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 164 SVIWVVDGGNI----------------KLKTAIQNTGKM--STGLAL-DSEGKRLYTTNADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp CEEEEEETTTT----------------EEEEEECCCCTT--CCCCEE-ETTTTEEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEcCCCC----------------ceEEEecCCCCc--cceEEE-CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc
Confidence 88999999877 566666534433 778886 99999999999999999999999998877764
Q ss_pred ----ccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCc-eEEEeCCCCeEEEEEe
Q 023246 162 ----DRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRL 234 (285)
Q Consensus 162 ----h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~s~d~~i~vwd~ 234 (285)
+...+..++|+|++++++.++ .++.|.+||+.+++. ..+..... ..+.+ .++++ ++++...++.|.+||.
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~-s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLF-NPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEE-ETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEE-CCCCCEEEEEECCCCeEEEEEC
Confidence 455678899999999866655 458999999987764 22221111 22222 33344 5666778999999999
Q ss_pred cccccceeEeeeccccccCCCCCcCeEEEeecCCCCC
Q 023246 235 QRRQTLAYRERRYNAADFESDEEEGETYLLGFSDSDA 271 (285)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 271 (285)
.+.+.+..+........+....+...+|+........
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~~ 338 (353)
T 3vgz_A 302 KSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTK 338 (353)
T ss_dssp TTTEEEEEEECCSEEEEEEECTTSCEEEEEEECCCBT
T ss_pred CCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcccccc
Confidence 8887776665443444555666665688776554433
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=2.9e-20 Score=165.13 Aligned_cols=218 Identities=12% Similarity=0.081 Sum_probs=148.5
Q ss_pred ccceeEEEEcCCCCcEEEEeeC-CC-----cEEEEEccCCcccCCcCCCCCc-----ccc---cccc-cCCCCCcceEEE
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGS-DE-----YARVYDIRKCHWYSPISSDTPV-----DTF---CPRH-LIGKNNIHITGL 67 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~-dg-----~v~iwd~~~~~~~~~~~~~~~~-----~~~---~~~~-~~~~h~~~v~~i 67 (285)
...|.+++|+||+ .+|++++. |+ .|++||+.+++........... ... .... ........+.++
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4568999999986 88888887 88 8999999988642211100000 000 0000 000001347899
Q ss_pred EEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCC--CceEeecccCceeeeeEEEecCCCcEEEEecCCCeE
Q 023246 68 AYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKRE--EPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHL 145 (285)
Q Consensus 68 ~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 145 (285)
+|||+|++|+++.++.|++||+.++ . ....+..+... +..++| +|+|++|+.++ ++.|
T Consensus 115 ~~SpDg~~l~~~~~~~i~~~d~~~~----------------~~~~~~~l~~~~~~--~~~~~~-SPDG~~la~~~-~~~i 174 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGGELYLYDLKQE----------------GKAAVRQLTHGEGF--ATDAKL-SPKGGFVSFIR-GRNL 174 (741)
T ss_dssp EECTTSSEEEEEETTEEEEEESSSC----------------STTSCCBCCCSSSC--EEEEEE-CTTSSEEEEEE-TTEE
T ss_pred EECCCCCEEEEEeCCcEEEEECCCC----------------CcceEEEcccCCcc--cccccC-CCCCCEEEEEe-CCcE
Confidence 9999999999877799999999865 1 33445555544 889996 99999999887 4699
Q ss_pred EEEecCCCceEEEEeccccc----------------ceEeEEcCCCCeEEEEecCC------------------------
Q 023246 146 FIWKKKGGKLVRLMVGDRHV----------------VNQLEPHPHIPMFATCGIEK------------------------ 185 (285)
Q Consensus 146 ~vwd~~~~~~~~~~~~h~~~----------------v~~~~~~p~~~~l~t~~~d~------------------------ 185 (285)
++||+.+++.......+... +..++|+|+|++|++++.|+
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 99999988766544433322 47899999999999988765
Q ss_pred ---------cEEEEcCCC-CCCCCCC---CCcccceeeccccCCCceEEEeC-----CCCeEEEEEecccccceeE
Q 023246 186 ---------TVKLWAPMP-TDFPPLP---DNAEKIMKANKQGREDHSRITLT-----PDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 186 ---------~i~iwd~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s-----~d~~i~vwd~~~~~~~~~~ 243 (285)
.|++||+.+ ++...+. .+...+....| ++++.++..+ .+..|++||+.+++.....
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW--RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE--EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe--CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 789999988 7653332 34455556655 5555555433 3578999999887654433
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.5e-18 Score=139.84 Aligned_cols=199 Identities=13% Similarity=0.183 Sum_probs=130.4
Q ss_pred cceeEEEEcCCCCcEEEEeeCC-CcEEEEEcc--CCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-e
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSD-EYARVYDIR--KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y 79 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~d-g~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~ 79 (285)
..+.+++|+|++ .+|++++.+ +.|++|++. +++.. ....+ ..+. .+..++|+|++++|++ +
T Consensus 38 ~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~------------~~~~~-~~~~-~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 38 GQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALT------------FAAES-ALPG-SLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp SCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEE------------EEEEE-ECSS-CCSEEEECTTSSEEEEEE
T ss_pred CCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCcee------------ecccc-ccCC-CCcEEEEcCCCCEEEEEe
Confidence 357789999986 677777765 999999997 44321 11111 2222 6789999999997655 4
Q ss_pred c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec-CCCeEEEEecCC-CceE
Q 023246 80 N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKG-GKLV 156 (285)
Q Consensus 80 ~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~-~~~~ 156 (285)
. ++.|.+||+..+. ..+....+..+. . +.+++| +|+++++++++ .++.|++||+.+ ++..
T Consensus 103 ~~~~~i~~~d~~~~~-------------~~~~~~~~~~~~-~--~~~~~~-s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGL-------------PVGVVDVVEGLD-G--CHSANI-SPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp TTTTEEEEEEEETTE-------------EEEEEEEECCCT-T--BCCCEE-CTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cCCCeEEEEECCCCc-------------cccccccccCCC-C--ceEEEE-CCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 4 8899999994220 002333343332 2 788886 99999887776 899999999987 6543
Q ss_pred E----EEec-ccccceEeEEcCCCCeEEEE-ecCCcEEEEcCCC--CCCC------CCCCC---cccceeeccccCCCc-
Q 023246 157 R----LMVG-DRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMP--TDFP------PLPDN---AEKIMKANKQGREDH- 218 (285)
Q Consensus 157 ~----~~~~-h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~--~~~~------~~~~~---~~~~~~~~~~~~~~~- 218 (285)
. .+.. ....+..++|+|++++++.+ ..++.|.+|++.. +.+. .+... ...+..+.+ .++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~-s~dg~~ 244 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI-TPDGRH 244 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE-CTTSSE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE-CCCCCE
Confidence 2 2232 23478889999999976555 4789999999953 3321 11111 111222333 34444
Q ss_pred eEEEeCCCCeEEEEEec
Q 023246 219 SRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~ 235 (285)
++++...++.|.+|++.
T Consensus 245 l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 245 LYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEc
Confidence 44577789999999998
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.84 E-value=3.8e-19 Score=152.07 Aligned_cols=197 Identities=10% Similarity=-0.004 Sum_probs=145.4
Q ss_pred EEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcEEEEE
Q 023246 10 VIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFE 88 (285)
Q Consensus 10 ~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~iwd 88 (285)
+|+|++ .++++++.|++|.+||..++++ ...+..++. +..++|+|+|++|+++ .|++|.+||
T Consensus 144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~--------------~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D 206 (543)
T 1nir_A 144 DLDLPN-LFSVTLRDAGQIALVDGDSKKI--------------VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMID 206 (543)
T ss_dssp CCCGGG-EEEEEEGGGTEEEEEETTTCCE--------------EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred ccCCCC-EEEEEEcCCCeEEEEECCCceE--------------EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEE
Confidence 488875 8899999999999999998873 222212333 8899999999988885 589999999
Q ss_pred c--CCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC----CCcEEEEecC-CCeEEEEecCCCceEEEEec
Q 023246 89 K--NMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP----NDEYVMSGSD-CGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 89 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~ 161 (285)
+ .+. +.+..+.... .+..++| +| +++++++++. +++|.+||..+++++..+..
T Consensus 207 ~~~~t~----------------~~~~~i~~g~---~p~~va~-sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 207 LWAKEP----------------TKVAEIKIGI---EARSVES-SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp TTSSSC----------------EEEEEEECCS---EEEEEEE-CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred CcCCCC----------------cEEEEEecCC---CcceEEe-CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 9 655 5666666432 2788997 99 9999988874 89999999999999988864
Q ss_pred c----------c-ccceEeEEcCCCCe-EEEEecCCcEEEEcCCCCCCCC--CCCCcccceeeccccCCCceE-EEeCCC
Q 023246 162 D----------R-HVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSR-ITLTPD 226 (285)
Q Consensus 162 h----------~-~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~s~d 226 (285)
+ . ..+..+.++|++.. +++...++.|.+||+...+... ...+...+.... ..++++++ ++...+
T Consensus 267 ~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~-~spdg~~l~va~~~~ 345 (543)
T 1nir_A 267 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGG-WDSSHRYFMTAANNS 345 (543)
T ss_dssp CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEE-ECTTSCEEEEEEGGG
T ss_pred cCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCce-ECCCCCEEEEEecCC
Confidence 2 2 36889999998776 6677789999999997654321 111222222222 24455554 556678
Q ss_pred CeEEEEEecccccceeEe
Q 023246 227 VIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 227 ~~i~vwd~~~~~~~~~~~ 244 (285)
++|.+||..+++....+.
T Consensus 346 ~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred CeEEEEECCCCeEEEeec
Confidence 999999999887766554
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=9.3e-20 Score=161.47 Aligned_cols=197 Identities=9% Similarity=0.039 Sum_probs=140.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCc---ceEEEEEecCCCEEEEec-
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI---HITGLAYSNTSELLISYN- 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~i~~s~~~~~l~s~~- 80 (285)
.+.+++|+|++ .++++ +.||+|++||+.+++.. ..+ ..|.. .|.+++|||||++|+++.
T Consensus 18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~--------------~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTST--------------VLI-EGKKIESLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCE--------------EEE-CTTTTTTTTCSEEEECTTSSEEEEEES
T ss_pred cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEE--------------EEe-ccccccccccceEEECCCCCEEEEEec
Confidence 46789999986 66665 78999999999988631 111 33433 489999999999888854
Q ss_pred C---------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEee---cccCceeeeeEEEecCCCcEEEEecCCCeEEEE
Q 023246 81 D---------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 81 d---------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vw 148 (285)
+ +.+++||+.++ +. ..+. .+... +..++| +|+|+.|+.++. +.|++|
T Consensus 81 ~~~~~~~~~~~~i~~~d~~~~----------------~~-~~l~~~~~~~~~--~~~~~~-SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSKIPHG----------------DP-QSLDPPEVSNAK--LQYAGW-GPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp CCCCSSSCCCSEEEEEESSSC----------------CC-EECCCTTCCSCC--CSBCCB-CSSTTCEEEEET-TEEEEE
T ss_pred CccceeecceeeEEEEECCCC----------------ce-EeccCCcccccc--ccccEE-CCCCCEEEEEEC-CeEEEE
Confidence 2 78999999876 22 3333 23222 777886 999999999886 899999
Q ss_pred ecCCCceEEEEecccccc------------------eEeEEcCCCCeEEEEecCC-------------------------
Q 023246 149 KKKGGKLVRLMVGDRHVV------------------NQLEPHPHIPMFATCGIEK------------------------- 185 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v------------------~~~~~~p~~~~l~t~~~d~------------------------- 185 (285)
|+.+++.......+...+ .+++|+|+|++|++++.|+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999888776665544433 7899999999999887553
Q ss_pred ---------cEEEEcCCCCCC-CCCCCC------cccceeeccccCCCceEEEeC----CCCeEEEEEecccccc
Q 023246 186 ---------TVKLWAPMPTDF-PPLPDN------AEKIMKANKQGREDHSRITLT----PDVIMHVLRLQRRQTL 240 (285)
Q Consensus 186 ---------~i~iwd~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~s----~d~~i~vwd~~~~~~~ 240 (285)
.|++||+.++.. ..+..+ ...+....+ +++++++++.+ .+..|++||+.+++..
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~-SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW-ATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE-SSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEE-eCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 799999987763 444432 233334443 55666665543 3368999998876543
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=1.9e-18 Score=138.88 Aligned_cols=193 Identities=6% Similarity=0.036 Sum_probs=133.7
Q ss_pred EEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ec-CCcEEEE
Q 023246 10 VIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-DELVYLF 87 (285)
Q Consensus 10 ~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~-d~~i~iw 87 (285)
.|.+++..++++.+.++.|++||+.+++.. ..+ ..+...+ .++|+|+++++++ +. ++.|.+|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~--------------~~~-~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~ 67 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL--------------NQI-TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQI 67 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE--------------EEE-ECCCCEE-EEEECSSSCEEEEEESTTCEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee--------------eeE-EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEE
Confidence 456655577889999999999999988732 222 2234455 9999999985555 44 8899999
Q ss_pred EcCCCCCCCCCCCCCccccCCCC-ceEeecccCceeeeeEEEecCCCcEEEEecCCC---eEEEEecCCCceEEEEeccc
Q 023246 88 EKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG---HLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~v~vwd~~~~~~~~~~~~h~ 163 (285)
|..++ +. ...+..+..+ ..+++| +|++++++++..++ .|.+||+.+++.+..+..+
T Consensus 68 d~~~~----------------~~~~~~~~~~~~~--~~~~~~-s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~- 127 (331)
T 3u4y_A 68 ETQLE----------------PPKVVAIQEGQSS--MADVDI-TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP- 127 (331)
T ss_dssp ECSSS----------------SCEEEEEEECSSC--CCCEEE-CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-
T ss_pred ECCCC----------------ceeEEecccCCCC--ccceEE-CCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-
Confidence 99877 44 5555555543 444887 99999999666553 9999999999988877654
Q ss_pred ccceEeEEcCCCCeEEEE-ecCCc-EEEEcCCCCCCC-----CCCCCcccceeeccccCCCc-eEEEeCCCCeEEEEEec
Q 023246 164 HVVNQLEPHPHIPMFATC-GIEKT-VKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~-~~d~~-i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~s~d~~i~vwd~~ 235 (285)
..+..++|+|++++++++ ..++. |.+|++...... ...........+.+ .++++ ++++...++.|++||+.
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITF-TPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEE-CTTSSEEEEEETTTTEEEEEECS
T ss_pred CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEE-CCCCCEEEEEeCCCCeEEEEECC
Confidence 456899999999865554 55588 999998643211 11111122233332 34444 56677789999999998
Q ss_pred cccc
Q 023246 236 RRQT 239 (285)
Q Consensus 236 ~~~~ 239 (285)
+++.
T Consensus 207 ~~~~ 210 (331)
T 3u4y_A 207 NPEN 210 (331)
T ss_dssp STTS
T ss_pred CCcc
Confidence 8776
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=1.8e-18 Score=138.91 Aligned_cols=198 Identities=5% Similarity=-0.029 Sum_probs=132.1
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C-C
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D-E 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d-~ 82 (285)
.+ +++|+|++..+++++..++.|.+||+.+++.. ...+ ..+..+..+++|+|++++++++. + +
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-------------~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~ 106 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-------------VVAI-QEGQSSMADVDITPDDQFAVTVTGLNH 106 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-------------EEEE-EECSSCCCCEEECTTSSEEEECCCSSS
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-------------EEec-ccCCCCccceEECCCCCEEEEecCCCC
Confidence 45 89999987435555555899999999987620 1111 33444555599999999888654 3 3
Q ss_pred --cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEE-ecCCCe-EEEEecCCCceEE-
Q 023246 83 --LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS-GSDCGH-LFIWKKKGGKLVR- 157 (285)
Q Consensus 83 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~dg~-v~vwd~~~~~~~~- 157 (285)
.|.+||+.++ +.+..+..+.. ..+++| +|+++++++ ...++. |.+|++.....+.
T Consensus 107 ~~~i~v~d~~~~----------------~~~~~~~~~~~---~~~~~~-spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 107 PFNMQSYSFLKN----------------KFISTIPIPYD---AVGIAI-SPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp SCEEEEEETTTT----------------EEEEEEECCTT---EEEEEE-CTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred cccEEEEECCCC----------------CeEEEEECCCC---ccceEE-CCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 8999999877 45565554432 678997 999985554 455577 9999987544331
Q ss_pred ---EEecccccceEeEEcCCCCeE-EEEecCCcEEEEcCCCCCC---C-CCCCCcccceeeccccCCCce-EEEeCCCCe
Q 023246 158 ---LMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDF---P-PLPDNAEKIMKANKQGREDHS-RITLTPDVI 228 (285)
Q Consensus 158 ---~~~~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~-~~~~s~d~~ 228 (285)
........+..++|+|+++++ +++..++.|++||+..++. . .+. ....+..+. ..+++++ +++...++.
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~-~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIV-VSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEE-ECTTSSEEEEECSSEEE
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEE-ECCCCCEEEEEEcCCCE
Confidence 122334568899999999975 4455689999999987664 2 222 122222232 2445554 455556789
Q ss_pred EEEEEeccccc
Q 023246 229 MHVLRLQRRQT 239 (285)
Q Consensus 229 i~vwd~~~~~~ 239 (285)
|.+||+.+++.
T Consensus 245 i~~~d~~~~~~ 255 (331)
T 3u4y_A 245 VFNFNQLSGTL 255 (331)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCce
Confidence 99999987655
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.83 E-value=2.3e-18 Score=139.36 Aligned_cols=206 Identities=10% Similarity=0.017 Sum_probs=145.6
Q ss_pred cceeEEEEcCCCCcEEEEeeC-------CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE
Q 023246 4 IRLNAIVIDPRNPNYFAVGGS-------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 76 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l 76 (285)
..+..++|+|++ .++++++. ++.|.+||..+++.... + . ....+..++|+|+|+++
T Consensus 41 ~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--------------~-~-~~~~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 41 KGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQA--------------I-H-NDLKPFGATINNTTQTL 103 (353)
T ss_dssp SSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEE--------------E-E-ESSCCCSEEEETTTTEE
T ss_pred cCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE--------------E-e-cCCCcceEEECCCCCEE
Confidence 356789999986 56666553 57899999998863221 1 1 12346789999999855
Q ss_pred E-Eec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc-------eeeeeEEEecCCCcEEEEec--CCCeE
Q 023246 77 I-SYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDEYVMSGS--DCGHL 145 (285)
Q Consensus 77 ~-s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~--~dg~v 145 (285)
+ +.. ++.|.+||..++ +.+..+..+... ..+.++.| +|+++++++++ .++.|
T Consensus 104 ~v~~~~~~~v~~~d~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKTG----------------EVKGRLVLDDRKRTEEVRPLQPRELVA-DDATNTVYISGIGKESVI 166 (353)
T ss_dssp EEEETTTTEEEEEETTTC----------------CEEEEEESCCCCCCSSCCCCEEEEEEE-ETTTTEEEEEEESSSCEE
T ss_pred EEEecCCCEEEEEeCCCC----------------eeEEEEecCCCccccccCCCCCceEEE-CCCCCEEEEEecCCCceE
Confidence 4 444 799999999887 555666543321 12677887 99998777665 58899
Q ss_pred EEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCC-CCCC----CcccceeeccccCCCc-e
Q 023246 146 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PLPD----NAEKIMKANKQGREDH-S 219 (285)
Q Consensus 146 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~----~~~~~~~~~~~~~~~~-~ 219 (285)
.+||+.+++.+..+..+...+..++|+|+++++++++.++.|.+||+.+++.. .+.. +......+.+ .++++ +
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l 245 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISL-DTARQRA 245 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE-ETTTTEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEE-CCCCCEE
Confidence 99999999998888766667899999999999999999999999999877532 2211 1222222333 33444 5
Q ss_pred EEEeCCCCeEEEEEecccccceeEe
Q 023246 220 RITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 220 ~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
+++...++.|.+||+.+++.+..+.
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEE
Confidence 5556667999999998877655543
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.82 E-value=1.2e-18 Score=149.08 Aligned_cols=210 Identities=11% Similarity=0.141 Sum_probs=151.1
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ec-CC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-DE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~-d~ 82 (285)
.+.++.++|+++.++++...+++|.+||+.+.+... ... ..+...+..+.|+|+|++|++ +. ++
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~------------~~~--i~~~~~~~~~~~spdg~~l~va~~~~~ 346 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT------------VTS--IGAAPFLHDGGWDSSHRYFMTAANNSN 346 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE------------EEE--EECCSSCCCEEECTTSCEEEEEEGGGT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce------------eEE--eccCcCccCceECCCCCEEEEEecCCC
Confidence 678999999887888888999999999998765211 011 123456778999999997655 44 89
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC-CcEEEEec-CCCeEEEEecCC-------C
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGS-DCGHLFIWKKKG-------G 153 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~-~dg~v~vwd~~~-------~ 153 (285)
+|.+||..++ +++..+.....+..-....|.+|+ +..++++. .|++|.+||+.+ .
T Consensus 347 ~v~v~D~~tg----------------~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 347 KVAVIDSKDR----------------RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp EEEEEETTTT----------------EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred eEEEEECCCC----------------eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcC
Confidence 9999999987 666666642211111223333566 66667765 689999999988 8
Q ss_pred ceEEEEecccccceEeEEcCCCCeEEEEe-------cCCcEEEEcCCCCCCC-CC---------CCCcccceeeccccCC
Q 023246 154 KLVRLMVGDRHVVNQLEPHPHIPMFATCG-------IEKTVKLWAPMPTDFP-PL---------PDNAEKIMKANKQGRE 216 (285)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~p~~~~l~t~~-------~d~~i~iwd~~~~~~~-~~---------~~~~~~~~~~~~~~~~ 216 (285)
+++.++..|.+.+..++++|++++|++++ .+++|.+||+.+.+.. +. ..+...+.........
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCC
Confidence 89999999988899999999999999987 3779999999877643 21 2344555555443333
Q ss_pred CceEEEe----CCCCeEEEEEecccccceeEe
Q 023246 217 DHSRITL----TPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 217 ~~~~~~~----s~d~~i~vwd~~~~~~~~~~~ 244 (285)
...+++. +.++.|.|||..+.+.+..+.
T Consensus 491 ~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 491 DEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp SEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 3344442 357999999999987776654
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=2.6e-18 Score=138.09 Aligned_cols=205 Identities=9% Similarity=0.018 Sum_probs=140.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-----
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY----- 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~----- 79 (285)
.+..++|+|++..+++++..++.|.+||+.+++....+.. .. ...|...+..++|+|+|++|+++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 104 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL---------ST-PEERVKSLFGAALSPDGKTLAIYESPVR 104 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC---------CB-TTEEEECTTCEEECTTSSEEEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc---------CC-cccccccccceEECCCCCEEEEEecccc
Confidence 4788999998745667777789999999988763221110 00 00123356789999999877775
Q ss_pred --------cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC
Q 023246 80 --------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 151 (285)
Q Consensus 80 --------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~ 151 (285)
.++.|.+||+.++ +....+... .. +..++| +|++++++++ ++.|++||+.
T Consensus 105 ~~~~~~~~~~~~i~v~d~~~~----------------~~~~~~~~~-~~--~~~~~~-s~dg~~l~~~--~~~i~~~d~~ 162 (337)
T 1pby_B 105 LELTHFEVQPTRVALYDAETL----------------SRRKAFEAP-RQ--ITMLAW-ARDGSKLYGL--GRDLHVMDPE 162 (337)
T ss_dssp ECSSCEEECCCEEEEEETTTT----------------EEEEEEECC-SS--CCCEEE-CTTSSCEEEE--SSSEEEEETT
T ss_pred cccccccccCceEEEEECCCC----------------cEEEEEeCC-CC--cceeEE-CCCCCEEEEe--CCeEEEEECC
Confidence 4699999999876 455555432 22 677886 9999988777 5789999988
Q ss_pred CCceEEEEeccc------------------------------------------------------------------cc
Q 023246 152 GGKLVRLMVGDR------------------------------------------------------------------HV 165 (285)
Q Consensus 152 ~~~~~~~~~~h~------------------------------------------------------------------~~ 165 (285)
+++.+..+..+. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 163 AGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp TTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 877665443221 22
Q ss_pred ceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 166 VNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 166 v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
+..++|+|++++++++ ++.|.+||+.+++. ..+. ....+..+.+ .++++++++++.++.|++||+.+.+.+..+.
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~-s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNV-STDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEE-CTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-CCCceeeEEE-CCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 4468999999998887 68999999987653 2222 1122333322 4455667777889999999999887766554
Q ss_pred e
Q 023246 245 R 245 (285)
Q Consensus 245 ~ 245 (285)
.
T Consensus 319 ~ 319 (337)
T 1pby_B 319 L 319 (337)
T ss_dssp C
T ss_pred c
Confidence 3
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=6.2e-19 Score=155.81 Aligned_cols=195 Identities=11% Similarity=0.036 Sum_probs=138.0
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCc
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 83 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~ 83 (285)
..|.+++|+|+ ..++++ .++.|++||+.+++.. .+ ..+...+..++|+|+|+.|+.+.++.
T Consensus 82 ~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~~~~~---------------~l-~~~~~~~~~~~~SpdG~~la~~~~~~ 142 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF--TQGGLVGFDMLARKVT---------------YL-FDTNEETASLDFSPVGDRVAYVRNHN 142 (706)
T ss_dssp CCCEEEEETTT-TEEEEE--ETTEEEEEETTTTEEE---------------EE-ECCTTCCTTCEECTTSSEEEEEETTE
T ss_pred cCceeEEECCC-CeEEEE--ECCEEEEEECCCCceE---------------Ec-cCCcccccCCcCCCCCCEEEEEECCe
Confidence 46999999997 455554 3599999999877521 11 23455678899999999999988999
Q ss_pred EEEEEcCC-----CCCCCCCCCCCccccCCCCceEeecccCc------------eeeeeEEEecCCCcEEEEec------
Q 023246 84 VYLFEKNM-----GLGPSPLSLSPEDLQKREEPQVYSGHRNS------------QTVKGVNFFGPNDEYVMSGS------ 140 (285)
Q Consensus 84 i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~l~~~~------ 140 (285)
|++|++.+ + +.......+... ..+.++.| +|+|++|++++
T Consensus 143 i~v~~~~~~~~~~g----------------~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~-SpDg~~la~~~~d~~~~ 205 (706)
T 2z3z_A 143 LYIARGGKLGEGMS----------------RAIAVTIDGTETLVYGQAVHQREFGIEKGTFW-SPKGSCLAFYRMDQSMV 205 (706)
T ss_dssp EEEEECBCTTSCCC----------------CCEESCSCCBTTEEESSCCGGGCTTCCCSEEE-CTTSSEEEEEEEECTTS
T ss_pred EEEEecCcccccCC----------------CcEEeccCCCCCeEcccchhhhhcCCCceEEE-CCCCCEEEEEEECCCCC
Confidence 99999987 5 222212211111 11477886 99999999887
Q ss_pred ---------------------------CCCeEEEEecCCCceEEEEe--cccccceEeEEcCCCCeEEEEecCC-----c
Q 023246 141 ---------------------------DCGHLFIWKKKGGKLVRLMV--GDRHVVNQLEPHPHIPMFATCGIEK-----T 186 (285)
Q Consensus 141 ---------------------------~dg~v~vwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~t~~~d~-----~ 186 (285)
.+..|++||+.+++...... .|...+..++|+|++++|++++.++ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 285 (706)
T 2z3z_A 206 KPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECK 285 (706)
T ss_dssp CCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEE
T ss_pred ceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeE
Confidence 45789999999887654432 4667799999999999999888776 8
Q ss_pred EEEEcCCCC-CCCCCCC--Cccc---ceeeccccC--CCceEEEeCCCCeEEEEEec
Q 023246 187 VKLWAPMPT-DFPPLPD--NAEK---IMKANKQGR--EDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 187 i~iwd~~~~-~~~~~~~--~~~~---~~~~~~~~~--~~~~~~~~s~d~~i~vwd~~ 235 (285)
|++||+.++ ....+.. .... +.... +.+ +++++++++.++.+++|.+.
T Consensus 286 v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 286 VNAYDAETGRFVRTLFVETDKHYVEPLHPLT-FLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEEEETTTCCEEEEEEEEECSSCCCCCSCCE-ECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EEEEECCCCceeeEEEEccCCCeECccCCce-eecCCCCEEEEEEccCCccEEEEEE
Confidence 999999887 3322211 1111 11222 344 66688888889999999886
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=1.3e-18 Score=154.66 Aligned_cols=194 Identities=7% Similarity=0.003 Sum_probs=139.4
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCC---cccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKC---HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 81 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d 81 (285)
.|.+++||||+ .+|++++. +.|++||+.++ +.. .+..|...+..++|||+|++|+.+.+
T Consensus 110 ~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~----------------~l~~~~~~~~~~~~SPDG~~la~~~~ 171 (741)
T 2ecf_A 110 GIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVR----------------QLTHGEGFATDAKLSPKGGFVSFIRG 171 (741)
T ss_dssp ESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCC----------------BCCCSSSCEEEEEECTTSSEEEEEET
T ss_pred CcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEE----------------EcccCCcccccccCCCCCCEEEEEeC
Confidence 48899999986 78888776 99999999877 311 11456778999999999999999888
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc--------------eeeeeEEEecCCCcEEEEecCCC----
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS--------------QTVKGVNFFGPNDEYVMSGSDCG---- 143 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~i~~~~~~~~~~~~l~~~~~dg---- 143 (285)
+.|++||+.++ +.......+... ..+..+.| +|+|++|++++.|+
T Consensus 172 ~~i~~~d~~~g----------------~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~-SpDg~~l~~~~~d~~~~~ 234 (741)
T 2ecf_A 172 RNLWVIDLASG----------------RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWW-APDDSAIAYARIDESPVP 234 (741)
T ss_dssp TEEEEEETTTT----------------EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEE-CTTSSCEEEEEEECTTSC
T ss_pred CcEEEEecCCC----------------CEEEeccCCccceeccccceeeeeccccccceEE-CCCCCEEEEEEEcCCCCc
Confidence 89999999876 222222222111 01367886 99999999887665
Q ss_pred -----------------------------eEEEEecCC-CceEEEEe--cccccceEeEEcCCCCeEEEEec-----CCc
Q 023246 144 -----------------------------HLFIWKKKG-GKLVRLMV--GDRHVVNQLEPHPHIPMFATCGI-----EKT 186 (285)
Q Consensus 144 -----------------------------~v~vwd~~~-~~~~~~~~--~h~~~v~~~~~~p~~~~l~t~~~-----d~~ 186 (285)
.|++||+.+ ++...... .|...+..++| |++++|+.++. +..
T Consensus 235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~ 313 (741)
T 2ecf_A 235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD 313 (741)
T ss_dssp EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE
T ss_pred eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE
Confidence 899999998 87655443 37788999999 99999887654 568
Q ss_pred EEEEcCCCCCCCCCCC-Ccc----cceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 187 VKLWAPMPTDFPPLPD-NAE----KIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 187 i~iwd~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
|++||+.++....+.. +.. .+.... ++++++++++++.++.+++|.+.
T Consensus 314 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~-~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 314 LVEVTLASNQQRVLAHETSPTWVPLHNSLR-FLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EEEEETTTCCEEEEEEEECSSCCCCCSCCE-ECTTSCEEEEECTTSSCEEEEEC
T ss_pred EEEEECCCCceEEEEEcCCCCcCCcCCceE-ECCCCeEEEEecCCCccEEEEEc
Confidence 9999998876433221 111 111222 34556688888889988888776
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=2.8e-18 Score=135.12 Aligned_cols=178 Identities=11% Similarity=0.125 Sum_probs=126.2
Q ss_pred EeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEEcCC-CCCCCCCC
Q 023246 21 VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNM-GLGPSPLS 99 (285)
Q Consensus 21 tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~-~~~~~~~~ 99 (285)
.++.|++|++||+.+++. . .+ ..|...|.+++|+|++++|+++.++.|++||+.+ +
T Consensus 17 ~~~~~~~i~~~d~~~~~~--------------~-~~-~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~------- 73 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM--------------R-VV-WQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDP------- 73 (297)
T ss_dssp -CCCCEEEEEEETTTTEE--------------E-EE-EEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCC-------
T ss_pred CCCcceeEEEEeCCCCce--------------e-ee-ccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCC-------
Confidence 456789999999988752 1 11 3577889999999999999998899999999987 5
Q ss_pred CCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec--CC--CeEEEEecCCCceEEEEecccccceEeEEcCCC
Q 023246 100 LSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--DC--GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 175 (285)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d--g~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 175 (285)
+....+..+.. ..+.+++| +|+++++++++ .+ ..|..+++.+++ ...+..+ ..+..++|+|++
T Consensus 74 ---------~~~~~~~~~~~-~~~~~~~~-spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg 140 (297)
T 2ojh_A 74 ---------SPEKVDTGFAT-ICNNDHGI-SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDG 140 (297)
T ss_dssp ---------SCEECCCTTCC-CBCSCCEE-CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTS
T ss_pred ---------CceEecccccc-ccccceEE-CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCC
Confidence 34444434421 23888996 99999999988 33 455555556554 3444433 358899999999
Q ss_pred CeEE-EEecCCcEEEEcC--CCCCCCCCCCCcccceeeccccCCCceE-EEeCCCCeEEEEEec
Q 023246 176 PMFA-TCGIEKTVKLWAP--MPTDFPPLPDNAEKIMKANKQGREDHSR-ITLTPDVIMHVLRLQ 235 (285)
Q Consensus 176 ~~l~-t~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~d~~i~vwd~~ 235 (285)
++|+ +++.++.+++|++ .++....+..+...+....+ .+++..+ +++..++.+++|++.
T Consensus 141 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 141 KSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDY-SPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEE-CTTSSEEEEEECTTSSCEEEEEE
T ss_pred CEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceE-CCCCCEEEEEecCCCCccEEEEC
Confidence 9876 7788999999985 44454455555555555554 4445444 455568999999986
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.79 E-value=2.1e-18 Score=152.84 Aligned_cols=162 Identities=12% Similarity=0.012 Sum_probs=120.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCC---------CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 75 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~ 75 (285)
.|.+++||||+ .+|++++.+ +.+.+||+.+++.. ... ...+|...+..++|||+|+.
T Consensus 62 ~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------~l~-~~~~~~~~~~~~~~SPdG~~ 127 (723)
T 1xfd_A 62 RAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------------SLD-PPEVSNAKLQYAGWGPKGQQ 127 (723)
T ss_dssp TCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------------ECC-CTTCCSCCCSBCCBCSSTTC
T ss_pred ccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceE------------ecc-CCccccccccccEECCCCCE
Confidence 48899999986 788888764 77889999987631 011 11355666889999999999
Q ss_pred EEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCce----------------eeeeEEEecCCCcEEEEe
Q 023246 76 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ----------------TVKGVNFFGPNDEYVMSG 139 (285)
Q Consensus 76 l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~i~~~~~~~~~~~~l~~~ 139 (285)
|+.++++.|++|++.++ +.......+.... .+.+++| +|+|++|+++
T Consensus 128 la~~~~~~i~~~~~~~g----------------~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~-SpDg~~la~~ 190 (723)
T 1xfd_A 128 LIFIFENNIYYCAHVGK----------------QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW-SPDGTRLAYA 190 (723)
T ss_dssp EEEEETTEEEEESSSSS----------------CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE-CTTSSEEEEE
T ss_pred EEEEECCeEEEEECCCC----------------ceEEEecCCCCCceECcccceeEEEEeccCcceEEE-CCCCCEEEEE
Confidence 99988899999999876 3433333322210 1267886 9999999988
Q ss_pred cCCC----------------------------------eEEEEecCCCceEEEEecc------cccceEeEEcCCCCeEE
Q 023246 140 SDCG----------------------------------HLFIWKKKGGKLVRLMVGD------RHVVNQLEPHPHIPMFA 179 (285)
Q Consensus 140 ~~dg----------------------------------~v~vwd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l~ 179 (285)
+.++ .|++||+.+++....+..+ ...+..++|+|++++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~ 270 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAV 270 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEE
Confidence 7543 7999999988865666544 56789999999999887
Q ss_pred EEec----CCcEEEEcCCCCCC
Q 023246 180 TCGI----EKTVKLWAPMPTDF 197 (285)
Q Consensus 180 t~~~----d~~i~iwd~~~~~~ 197 (285)
+... +..|++||+.+++.
T Consensus 271 ~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 271 TWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp EEEETTSCEEEEEEEETTTCCE
T ss_pred EEEcCCCCeEEEEEEeCCCCcc
Confidence 7653 35799999988764
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=1.1e-17 Score=135.05 Aligned_cols=202 Identities=8% Similarity=0.005 Sum_probs=136.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCC-----CcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-----NIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~i~~s~~~~~l~s~ 79 (285)
.+..++|+|++..+++++..++.|.+||+.+++.... +...+ ...+..++|+|+|++|+++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~--------------~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH--------------ANLSSVPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE--------------EESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE--------------EEcccccccccccccceEECCCCCEEEEE
Confidence 4678999998744556667789999999998763211 10111 2346789999999988775
Q ss_pred c-C------------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEE
Q 023246 80 N-D------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLF 146 (285)
Q Consensus 80 ~-d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~ 146 (285)
. + +.|.+||+.++. ..+.+..+..+. .+.+++| +|+++ +++++. .|+
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~-------------~~~~~~~~~~~~---~~~~~~~-s~dg~-l~~~~~--~i~ 169 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGL-------------EAKPVRTFPMPR---QVYLMRA-ADDGS-LYVAGP--DIY 169 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGG-------------GBCCSEEEECCS---SCCCEEE-CTTSC-EEEESS--SEE
T ss_pred cccccccccccccCCCeEEEEECCCcc-------------ccceeeeccCCC---cccceeE-CCCCc-EEEccC--cEE
Confidence 4 4 899999998741 002333443332 2788887 99999 555543 399
Q ss_pred EEecCCCceEEEEeccc---------------------------------------------------------------
Q 023246 147 IWKKKGGKLVRLMVGDR--------------------------------------------------------------- 163 (285)
Q Consensus 147 vwd~~~~~~~~~~~~h~--------------------------------------------------------------- 163 (285)
+||+.+++.+..+..+.
T Consensus 170 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (349)
T 1jmx_B 170 KMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQE 249 (349)
T ss_dssp EECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEE
T ss_pred EEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecc
Confidence 99999888777665321
Q ss_pred -----ccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 164 -----HVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 164 -----~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
..+..++|+| ++++++++ ++.|.+||+.+++. ..+. ....+..+.+ .++++++++++.++.|++||+.+
T Consensus 250 ~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~-s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 250 FADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAF-DKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEE-CSSSSCEEEESBSSEEEEEETTT
T ss_pred cccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCCCccceEE-CCCCCEEEEecCCCeEEEEeccc
Confidence 1345677889 99998887 78999999987764 2222 1122233332 44555666678889999999988
Q ss_pred cccceeEe
Q 023246 237 RQTLAYRE 244 (285)
Q Consensus 237 ~~~~~~~~ 244 (285)
.+.+..+.
T Consensus 326 ~~~~~~~~ 333 (349)
T 1jmx_B 326 LEKVKNIK 333 (349)
T ss_dssp TEEEEEEE
T ss_pred cceeeeee
Confidence 77665544
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=8.8e-18 Score=145.28 Aligned_cols=196 Identities=10% Similarity=0.012 Sum_probs=134.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeC-CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
..+|.+++|+||| ..||.++. ||+++||++.+++ ...+...+...+..++|+|+ ++++++.
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~---------------~~~lt~~~~~~~~~~~~spd-~~l~~~~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGE---------------TVKLNREPINSVLDPHYGVG-RVILVRDV 83 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTE---------------EEECCSSCCSEECEECTTCS-EEEEEEEC
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCC---------------cEeeecccccccccccCCCC-eEEEEecc
Confidence 3579999999986 78887776 9999999986654 22232334468999999999 7666543
Q ss_pred ---CCcEEEEEcCC--CCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc--EEEEecCCCeEEEEecCCC
Q 023246 81 ---DELVYLFEKNM--GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE--YVMSGSDCGHLFIWKKKGG 153 (285)
Q Consensus 81 ---d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~l~~~~~dg~v~vwd~~~~ 153 (285)
+....+|.+.. . .....+..... +...+| +|+++ .+++++.++ +.+||+.++
T Consensus 84 ~~g~~~~~l~~~~~~~~----------------g~~~~l~~~~~---~~~~~~-s~dg~~~~~~s~~~~~-~~l~d~~~g 142 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRP----------------GEEQRLEAVKP---MRILSG-VDTGEAVVFTGATEDR-VALYALDGG 142 (582)
T ss_dssp STTSCCEEEEEEETTST----------------TCCEECTTSCS---BEEEEE-EECSSCEEEEEECSSC-EEEEEEETT
T ss_pred CCCCcceEEEEEeccCC----------------CccccccCCCC---ceeeee-CCCCCeEEEEecCCCC-ceEEEccCC
Confidence 45566666543 2 11122222222 223454 66664 455555555 459999988
Q ss_pred ceEEEEecccccceEeEEcCCCCeEEEEecC----CcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCC--
Q 023246 154 KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDV-- 227 (285)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~-- 227 (285)
+.......+ . .+++|+|+|+++++++.+ +.|++||+.+++...+..+...+....+ +++++.+++...++
T Consensus 143 ~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~-SpDG~~l~~~~~~~~~ 218 (582)
T 3o4h_A 143 GLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASI-SPGMKVTAGLETAREA 218 (582)
T ss_dssp EEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEE-CTTSCEEEEEECSSCE
T ss_pred cEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceE-CCCCCEEEEccCCCee
Confidence 765544433 2 889999999999988877 7899999998887777766666655544 66777777777788
Q ss_pred eEEEEEecccccc
Q 023246 228 IMHVLRLQRRQTL 240 (285)
Q Consensus 228 ~i~vwd~~~~~~~ 240 (285)
.|++||+.+++..
T Consensus 219 ~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 219 RLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTTCCEE
T ss_pred EEEEEcCCCCcEE
Confidence 8999998876554
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=2.1e-17 Score=133.42 Aligned_cols=153 Identities=9% Similarity=0.045 Sum_probs=109.3
Q ss_pred EEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE-Ee-cCCcEE
Q 023246 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI-SY-NDELVY 85 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~-s~-~d~~i~ 85 (285)
+++++++ ..++++++.+++|++||+.+++... .+..+....+..++|+|++++++ ++ .++.|.
T Consensus 4 g~~~~~~-~~~~v~~~~~~~v~~~d~~~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~ 68 (349)
T 1jmx_B 4 GPALKAG-HEYMIVTNYPNNLHVVDVASDTVYK--------------SCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIY 68 (349)
T ss_dssp CCCCCTT-CEEEEEEETTTEEEEEETTTTEEEE--------------EEECSSCCSSCEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccCC-CEEEEEeCCCCeEEEEECCCCcEEE--------------EEecCCCCCCceeEECCCCCEEEEEeCCCCcEE
Confidence 4577886 4899999999999999999886321 11111112467899999998554 44 489999
Q ss_pred EEEcCCCCCCCCCCCCCccccCCCCceEeecccC----ceeeeeEEEecCCCcEEEEecCC------------CeEEEEe
Q 023246 86 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVNFFGPNDEYVMSGSDC------------GHLFIWK 149 (285)
Q Consensus 86 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~d------------g~v~vwd 149 (285)
+||+.++ +....+..... ...+..++| +|+++++++++.+ +.|.+||
T Consensus 69 ~~d~~t~----------------~~~~~~~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d 131 (349)
T 1jmx_B 69 GIDLDTC----------------KNTFHANLSSVPGEVGRSMYSFAI-SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFS 131 (349)
T ss_dssp EEETTTT----------------EEEEEEESCCSTTEEEECSSCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred EEeCCCC----------------cEEEEEEcccccccccccccceEE-CCCCCEEEEEcccccccccccccCCCeEEEEE
Confidence 9999876 44445543221 122678887 9999999988865 8999999
Q ss_pred cCCCce---EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 150 KKGGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 150 ~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
+.+++. +..+.. ...+.+++|+|+++ ++.++ +.|.+||+.+++
T Consensus 132 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 132 TADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp GGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCC
T ss_pred CCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCc
Confidence 987543 344443 34688999999999 55554 349999997765
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.77 E-value=5e-17 Score=130.88 Aligned_cols=186 Identities=8% Similarity=0.044 Sum_probs=123.9
Q ss_pred cEEEEeeCCCcEEEEEccC-CcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c-CCcEEEEEcC--C
Q 023246 17 NYFAVGGSDEYARVYDIRK-CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N-DELVYLFEKN--M 91 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~-d~~i~iwd~~--~ 91 (285)
.++++++.|+.|++|++.. ++.. .... ..|...+.+++|+|++++|+++ . ++.|.+|++. +
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALT------------LTQV--VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEE------------EEEE--EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEEeCCCCCeEEEEEECCCCcEE------------Eeee--EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC
Confidence 4555658899999999963 3210 1111 2356678899999999977775 4 4999999997 3
Q ss_pred CCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec-CCCeEEEEecC---CCceEEEEecccccce
Q 023246 92 GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKK---GGKLVRLMVGDRHVVN 167 (285)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~---~~~~~~~~~~h~~~v~ 167 (285)
+ ....+..+..+. .+..++| +|+++++++++ .++.|.+||+. ..+.+..+..+ ..+.
T Consensus 72 ~--------------~~~~~~~~~~~~---~~~~~~~-s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~ 132 (343)
T 1ri6_A 72 G--------------ALTFAAESALPG---SLTHIST-DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCH 132 (343)
T ss_dssp C--------------CEEEEEEEECSS---CCSEEEE-CTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBC
T ss_pred C--------------ceeeccccccCC---CCcEEEE-cCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCce
Confidence 3 001223343333 3788997 99999776654 58999999994 33445555443 4689
Q ss_pred EeEEcCCCCeEEEEe-cCCcEEEEcCCC-CCCC-----CCCCC-cccceeeccccCCCc-eEEEeCCCCeEEEEEecc
Q 023246 168 QLEPHPHIPMFATCG-IEKTVKLWAPMP-TDFP-----PLPDN-AEKIMKANKQGREDH-SRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 168 ~~~~~p~~~~l~t~~-~d~~i~iwd~~~-~~~~-----~~~~~-~~~~~~~~~~~~~~~-~~~~~s~d~~i~vwd~~~ 236 (285)
+++|+|+++++++++ .++.|++|++.. +++. .+... ...+..+.+ .++++ ++++...++.+.+|++..
T Consensus 133 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF-HPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE-CTTSSEEEEEETTTTEEEEEESSC
T ss_pred EEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE-CCCCCEEEEEeCCCCEEEEEEecC
Confidence 999999999877777 899999999976 5432 11111 122333333 44444 455666899999999954
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=1.7e-16 Score=140.19 Aligned_cols=200 Identities=11% Similarity=0.119 Sum_probs=138.2
Q ss_pred eeEEEEcCCCCcEEEEee---------------------------------CCCcEEEEEccCCcccCCcCCCCCccccc
Q 023246 6 LNAIVIDPRNPNYFAVGG---------------------------------SDEYARVYDIRKCHWYSPISSDTPVDTFC 52 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~---------------------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 52 (285)
+.+++|+||+ .+|++++ .+..|.+||+.+++..
T Consensus 183 ~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~------------- 248 (706)
T 2z3z_A 183 EKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV------------- 248 (706)
T ss_dssp CCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE-------------
T ss_pred CceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE-------------
Confidence 5889999986 7888877 4467999999877521
Q ss_pred ccccCCCCCcceEEEEEecCCCEEEEe-cCC-----cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCce---ee
Q 023246 53 PRHLIGKNNIHITGLAYSNTSELLISY-NDE-----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ---TV 123 (285)
Q Consensus 53 ~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i 123 (285)
.......|...+..++|+|+|+.|+++ .++ .|++||+.++ +....+....... .+
T Consensus 249 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g----------------~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 249 YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG----------------RFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC----------------CEEEEEEEEECSSCCCCC
T ss_pred eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC----------------ceeeEEEEccCCCeECcc
Confidence 111113567789999999999987774 354 8999999875 2333332211111 13
Q ss_pred eeEEEecC--CCcEEEEecCCCeEEEEecC-CCceEEEEecccccceE-eEEcCCCCeEEEEec-CC----cEEEEcCCC
Q 023246 124 KGVNFFGP--NDEYVMSGSDCGHLFIWKKK-GGKLVRLMVGDRHVVNQ-LEPHPHIPMFATCGI-EK----TVKLWAPMP 194 (285)
Q Consensus 124 ~~~~~~~~--~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~h~~~v~~-~~~~p~~~~l~t~~~-d~----~i~iwd~~~ 194 (285)
..+.| +| +++++++++.++.+++|.+. +++.+..+..|...+.. ++|+|+++.|+.++. ++ .|..|++.+
T Consensus 313 ~~~~~-sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 313 HPLTF-LPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp SCCEE-CTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred CCcee-ecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 56786 99 99999999999999999876 67778888888777876 799999998765554 44 677777777
Q ss_pred CCCCCCCCCcccceeeccccCCCceEEEe-CCC---CeEEEEEecccc
Q 023246 195 TDFPPLPDNAEKIMKANKQGREDHSRITL-TPD---VIMHVLRLQRRQ 238 (285)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~d---~~i~vwd~~~~~ 238 (285)
+....+. +...+....+ ++++++++.. +.+ +.+++||+.+++
T Consensus 392 ~~~~~l~-~~~~~~~~~~-spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 392 GKTKDLT-PESGMHRTQL-SPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CCCEESC-CSSSEEEEEE-CTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCceecc-CCCceEEEEE-CCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 6654443 3344444433 4555555443 333 679999988765
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=1.2e-16 Score=129.31 Aligned_cols=203 Identities=7% Similarity=0.071 Sum_probs=127.9
Q ss_pred ceeEEEEcCCCCcEEEEeeC--CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe--c
Q 023246 5 RLNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--N 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~--~ 80 (285)
....++|+|++ .+++++.. ++.|.+|++.+++.. .... ...+...+..++|+|+|++|+++ .
T Consensus 41 ~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~------------~~~~-~~~~~~~p~~~a~spdg~~l~~~~~~ 106 (347)
T 3hfq_A 41 NPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAH------------KLNT-VVAPGTPPAYVAVDEARQLVYSANYH 106 (347)
T ss_dssp CCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEE------------EEEE-EEEESCCCSEEEEETTTTEEEEEETT
T ss_pred CcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEE------------Eeee-eecCCCCCEEEEECCCCCEEEEEeCC
Confidence 45679999986 55444432 689999999766521 1111 12355678899999999977764 4
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeeccc-------CceeeeeEEEecCCCcEEEEecCCCeEEEEecC-C
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-------NSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK-G 152 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~-~ 152 (285)
++.|.+|++.... ....+..+.... ....+.+++| +|+++++++...++.|.+|++. +
T Consensus 107 ~~~v~v~~~~~~g-------------~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 107 KGTAEVMKIAADG-------------ALTLTDTVQHSGHGPRPEQDGSHIHYTDL-TPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp TTEEEEEEECTTS-------------CEEEEEEEECCCCCSSTTCSSCCEEEEEE-CTTSCEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEEeCCCC-------------CeeecceeecCCCCCCccccCCCceEEEE-CCCCcEEEEeCCCCEEEEEEECCC
Confidence 7999999996320 001122221110 0112778887 9999977777789999999998 5
Q ss_pred CceEE--EEecc-cccceEeEEcCCCCeEEE-EecCCcEEEEcCCC--CCCC---C---CCCC---cccceeeccccCCC
Q 023246 153 GKLVR--LMVGD-RHVVNQLEPHPHIPMFAT-CGIEKTVKLWAPMP--TDFP---P---LPDN---AEKIMKANKQGRED 217 (285)
Q Consensus 153 ~~~~~--~~~~h-~~~v~~~~~~p~~~~l~t-~~~d~~i~iwd~~~--~~~~---~---~~~~---~~~~~~~~~~~~~~ 217 (285)
++... .+..+ ...+..++|+|++++++. ...++.|.+|++.. +.+. . .... ...+..+. ..+++
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~-~spdG 251 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR-LSHDG 251 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE-ECTTS
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE-ECCCC
Confidence 54332 22222 236788999999997555 55788999999864 3211 1 1110 01122232 34455
Q ss_pred ceE-EEeCCCCeEEEEEecc
Q 023246 218 HSR-ITLTPDVIMHVLRLQR 236 (285)
Q Consensus 218 ~~~-~~~s~d~~i~vwd~~~ 236 (285)
+++ ++...++.|.+|++..
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp CEEEEEEETTTEEEEEEECG
T ss_pred CEEEEEeCCCCEEEEEEECC
Confidence 544 6677789999999974
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=1.5e-16 Score=127.72 Aligned_cols=146 Identities=8% Similarity=0.023 Sum_probs=109.3
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCc-ceEEEEEecCCCEE-EEec-CCcEEEEEcCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELL-ISYN-DELVYLFEKNMGL 93 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~i~~s~~~~~l-~s~~-d~~i~iwd~~~~~ 93 (285)
.+|++++.+++|++||+.+++.. ..+..++.. .+..++|+|+++.+ +++. ++.|.+||+.++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~- 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD--------------KVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG- 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE--------------EEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-
T ss_pred cEEEEcCCCCeEEEEECCCCcEE--------------EEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-
Confidence 58899999999999999988632 111112221 36789999999755 4444 789999999877
Q ss_pred CCCCCCCCCccccCCCCceEeeccc-C--ceeeeeEEEecCCCcEEEEec------------CCCeEEEEecCCCceEEE
Q 023246 94 GPSPLSLSPEDLQKREEPQVYSGHR-N--SQTVKGVNFFGPNDEYVMSGS------------DCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~~l~~~~------------~dg~v~vwd~~~~~~~~~ 158 (285)
+.+..+.... . ...+..++| +|++++++++. .++.|.+||+.+++.+..
T Consensus 67 ---------------~~~~~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 67 ---------------ETLGRIDLSTPEERVKSLFGAAL-SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp ---------------CEEEEEECCBTTEEEECTTCEEE-CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEE
T ss_pred ---------------CeEeeEEcCCcccccccccceEE-CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEE
Confidence 4555554321 0 012678887 99999888875 579999999998888877
Q ss_pred EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
+.. ...+..++|+|++++++++ ++.|.+||+.+++
T Consensus 131 ~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 131 FEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp EEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE
T ss_pred EeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 764 4568889999999988877 6889999987654
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=2e-17 Score=152.16 Aligned_cols=205 Identities=7% Similarity=-0.056 Sum_probs=146.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEe-cCCCEEEEecCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLISYNDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s-~~~~~l~s~~d~~ 83 (285)
.+...+|+|++ ..|+.+ .++.|.+|++...+.. .+...... .......|...+..++|+ |+|+.|+.+.++.
T Consensus 246 ~~~~~~~SpDG-~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~----~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~ 318 (1045)
T 1k32_A 246 DYYPRHLNTDG-RRILFS-KGGSIYIFNPDTEKIE-KIEIGDLE----SPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQ 318 (1045)
T ss_dssp SSCEEEEEESS-SCEEEE-ETTEEEEECTTTCCEE-ECCCCCCC----BCCSEEEECGGGGEEEEEECGGGCEEEEETTE
T ss_pred CcceeeEcCCC-CEEEEE-eCCEEEEecCCceEee-eeccCccc----ccccccccccccceeeecCCCCCEEEEEEcCE
Confidence 35678999986 677776 5899999998443321 11100000 000001255678999999 9999998877999
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEE-EEecCCCceEEEEecc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLF-IWKKKGGKLVRLMVGD 162 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~-vwd~~~~~~~~~~~~h 162 (285)
|.+|+...+ ....+..+.. ..+..++| + +++.++.++.++.+. +|++.+++.. .+..|
T Consensus 319 i~~~~~~~~-----------------~~~~~~~~~~-~~~~~~~~-s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~ 377 (1045)
T 1k32_A 319 AFIQDVSGT-----------------YVLKVPEPLR-IRYVRRGG-D-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEEN 377 (1045)
T ss_dssp EEEECTTSS-----------------BEEECSCCSC-EEEEEECS-S-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCC
T ss_pred EEEEcCCCC-----------------ceEEccCCCc-ceEEeeeE-c-CCCeEEEEECCCceEEEEECCCCCce-EecCC
Confidence 999998765 2333444543 13888986 8 999999988888999 9999877654 44478
Q ss_pred cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCC----------CeEEE
Q 023246 163 RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPD----------VIMHV 231 (285)
Q Consensus 163 ~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d----------~~i~v 231 (285)
...+..++|+|++++|++++.++.|++||+.+++...+. .+...+....+ ++++++++.++.+ +.|++
T Consensus 378 ~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~-SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 378 LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI-SDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEE-CTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred ccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEE-CCCCCeEEEEecCccccccCCCCCeEEE
Confidence 788999999999999999999999999999888754433 45555545544 5666667666553 49999
Q ss_pred EEecccc
Q 023246 232 LRLQRRQ 238 (285)
Q Consensus 232 wd~~~~~ 238 (285)
||+.+++
T Consensus 457 ~d~~~g~ 463 (1045)
T 1k32_A 457 YDMEGRK 463 (1045)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 9998765
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.75 E-value=2.7e-17 Score=151.23 Aligned_cols=191 Identities=8% Similarity=0.001 Sum_probs=147.8
Q ss_pred ceeEEEEc-CCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCc-ceEEEEEecCCCEEEEe-cC
Q 023246 5 RLNAIVID-PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI-HITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 5 ~v~~~~~s-~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~i~~s~~~~~l~s~-~d 81 (285)
.|.+++|+ |++ ..|++++ ++.|.+|++.+++. ..+ ..|.. .+..++|+ +|+.|+.+ .+
T Consensus 297 ~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~s-dg~~l~~~s~~ 357 (1045)
T 1k32_A 297 SKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSGTYV---------------LKV-PEPLRIRYVRRGGD-TKVAFIHGTRE 357 (1045)
T ss_dssp GGGEEEEEECGG-GCEEEEE-TTEEEEECTTSSBE---------------EEC-SCCSCEEEEEECSS-SEEEEEEEETT
T ss_pred ccceeeecCCCC-CEEEEEE-cCEEEEEcCCCCce---------------EEc-cCCCcceEEeeeEc-CCCeEEEEECC
Confidence 58899999 986 7777777 78999999986642 112 45666 89999999 99887775 46
Q ss_pred CcEE-EEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 82 ELVY-LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 82 ~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
..+. +|++..+ ....+..+... +..++| +|++++|++++.++.|++||+.+++....+.
T Consensus 358 ~~l~~~~d~~~~-----------------~~~~l~~~~~~--~~~~~~-SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 358 GDFLGIYDYRTG-----------------KAEKFEENLGN--VFAMGV-DRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEEEEEETTTC-----------------CEEECCCCCCS--EEEEEE-CTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CceEEEEECCCC-----------------CceEecCCccc--eeeeEE-CCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 7788 8898765 33344455544 889996 9999999999999999999999999888877
Q ss_pred cccccceEeEEcCCCCeEEEEecCC----------cEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEE
Q 023246 161 GDRHVVNQLEPHPHIPMFATCGIEK----------TVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMH 230 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~ 230 (285)
.|...+..++|+|++++|++++.++ .|++||+.+++...+..+...+....+ .++++.++..+.++...
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~-spdG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAF-DADSKNLYYLSYRSLDP 496 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEE-CTTSCEEEEEESCCCCC
T ss_pred CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceE-cCCCCEEEEEecccCCc
Confidence 8999999999999999998887654 899999988776556656555555443 55666777777776666
Q ss_pred EEEec
Q 023246 231 VLRLQ 235 (285)
Q Consensus 231 vwd~~ 235 (285)
+|+..
T Consensus 497 ~~~~~ 501 (1045)
T 1k32_A 497 SPDRV 501 (1045)
T ss_dssp EECSS
T ss_pred Ccchh
Confidence 66543
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=2.8e-17 Score=145.53 Aligned_cols=208 Identities=12% Similarity=0.087 Sum_probs=130.3
Q ss_pred ceeEEEEcCCCCcEEEEeeC---------CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCE
Q 023246 5 RLNAIVIDPRNPNYFAVGGS---------DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL 75 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~ 75 (285)
.|.+++||||+ .+|++++. ++.|++||+.+++.... ..+ ...+..++|||+|+.
T Consensus 61 ~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~------------~~l----~~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 61 NASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG------------NEL----PRPIQYLCWSPVGSK 123 (719)
T ss_dssp TCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS------------SCC----CSSBCCEEECSSTTC
T ss_pred ceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCccccc------------eec----CcccccceECCCCCE
Confidence 38899999986 78887766 78999999998863100 111 235788999999999
Q ss_pred EEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc-------eeeeeEEEecCCCcEEEEecCCC-----
Q 023246 76 LISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDEYVMSGSDCG----- 143 (285)
Q Consensus 76 l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~~dg----- 143 (285)
|+.+.++.|++|++.++... .+. ........+.++... ....+++| +|+|++|++++.|.
T Consensus 124 la~~~~~~i~~~~~~~g~~~---~l~----~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w-SPDG~~la~~~~d~~~~~~ 195 (719)
T 1z68_A 124 LAYVYQNNIYLKQRPGDPPF---QIT----FNGRENKIFNGIPDWVYEEEMLATKYALWW-SPNGKFLAYAEFNDTDIPV 195 (719)
T ss_dssp EEEEETTEEEEESSTTSCCE---ECC----CCCBTTTEEESSCCHHHHHHTTCSSCCEEE-CTTSSEEEEEEEECTTSCE
T ss_pred EEEEECCeEEEEeCCCCCcE---EEe----cCCCcCCeEcccccceeeeecccCcccEEE-CCCCCEEEEEEECCCCCce
Confidence 99988999999999876200 000 000000111122111 00247886 99999999887542
Q ss_pred -----------------------------eEEEEecCCCceE---E-----EEecccccceEeEEcCCCCeEEEEecCC-
Q 023246 144 -----------------------------HLFIWKKKGGKLV---R-----LMVGDRHVVNQLEPHPHIPMFATCGIEK- 185 (285)
Q Consensus 144 -----------------------------~v~vwd~~~~~~~---~-----~~~~h~~~v~~~~~~p~~~~l~t~~~d~- 185 (285)
.|++||+.+++.. . .+.+|...+..++|+|+++.+++....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~ 275 (719)
T 1z68_A 196 IAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ 275 (719)
T ss_dssp EEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESST
T ss_pred EEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecccc
Confidence 7889999887652 1 1235778899999999987777654332
Q ss_pred ---cEEEEc----CCCCCCCCCC-----CCcccce-----eeccccCCCceE-E-EeCCCC--eEEEEEecccc
Q 023246 186 ---TVKLWA----PMPTDFPPLP-----DNAEKIM-----KANKQGREDHSR-I-TLTPDV--IMHVLRLQRRQ 238 (285)
Q Consensus 186 ---~i~iwd----~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~-~-~~s~d~--~i~vwd~~~~~ 238 (285)
.|.+|| +.+++...+. .+...+. ... ++++++.+ + +...++ .|++|++..++
T Consensus 276 ~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 276 NVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPV-FSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp TEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCE-ECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccE-ECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 488899 7766554432 3333332 222 34444433 3 344555 56666665543
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=2.6e-17 Score=145.75 Aligned_cols=190 Identities=8% Similarity=0.129 Sum_probs=128.7
Q ss_pred EEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCc---ceEEEEEecCCCEEEEec----
Q 023246 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNI---HITGLAYSNTSELLISYN---- 80 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~i~~s~~~~~l~s~~---- 80 (285)
+++|+|++ .++++ +.|++|++||+.+++.. .+..+|.. .+.+++|||||++|+.+.
T Consensus 20 ~~~~s~dg-~~~~~-~~d~~i~~~~~~~g~~~---------------~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~ 82 (719)
T 1z68_A 20 FPNWISGQ-EYLHQ-SADNNIVLYNIETGQSY---------------TILSNRTMKSVNASNYGLSPDRQFVYLESDYSK 82 (719)
T ss_dssp CCEESSSS-EEEEE-CTTSCEEEEESSSCCEE---------------EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEE
T ss_pred ccEECCCC-eEEEE-cCCCCEEEEEcCCCcEE---------------EEEccccccccceeeEEECCCCCeEEEEecCce
Confidence 68999986 55555 46999999999988621 11122322 388999999999888753
Q ss_pred ------CCcEEEEEcCCCCCCCCCCCCCccccCCCCc--eEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCC
Q 023246 81 ------DELVYLFEKNMGLGPSPLSLSPEDLQKREEP--QVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG 152 (285)
Q Consensus 81 ------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 152 (285)
++.|++||+.++ +.+ ..+. .. +..++| +|+|+.|+.+. ++.|++|++.+
T Consensus 83 ~~~~s~~~~i~~~d~~~g----------------~~~~~~~l~---~~--~~~~~~-SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 83 LWRYSYTATYYIYDLSNG----------------EFVRGNELP---RP--IQYLCW-SPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp CSSSCEEEEEEEEETTTT----------------EECCSSCCC---SS--BCCEEE-CSSTTCEEEEE-TTEEEEESSTT
T ss_pred eEEeecceEEEEEECCCC----------------ccccceecC---cc--cccceE-CCCCCEEEEEE-CCeEEEEeCCC
Confidence 489999999876 221 1121 22 778886 99999999886 78999999998
Q ss_pred CceEEEE-eccccc-----------------ceEeEEcCCCCeEEEEecCC-----------------------------
Q 023246 153 GKLVRLM-VGDRHV-----------------VNQLEPHPHIPMFATCGIEK----------------------------- 185 (285)
Q Consensus 153 ~~~~~~~-~~h~~~-----------------v~~~~~~p~~~~l~t~~~d~----------------------------- 185 (285)
++..... .++... ..+++|+|||++|++++.|.
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 8765432 222221 25899999999999988652
Q ss_pred -----cEEEEcCCCCCCC---C------CCCCcccceeeccccCCCceEEEeCCC----CeEEEEE----ecccc
Q 023246 186 -----TVKLWAPMPTDFP---P------LPDNAEKIMKANKQGREDHSRITLTPD----VIMHVLR----LQRRQ 238 (285)
Q Consensus 186 -----~i~iwd~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~s~d----~~i~vwd----~~~~~ 238 (285)
.|++||+.++... . +.++...+....| +++++++++.... ..|.+|| +.+++
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTW-VTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEE-SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEE-eCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 7889999876531 1 1234444555554 4456665553322 3588888 55543
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=5.1e-16 Score=137.89 Aligned_cols=199 Identities=8% Similarity=0.054 Sum_probs=130.0
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C--
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D-- 81 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d-- 81 (285)
...+++|+|++ .+++++ |++|++||+.+++....+.. .....+......++|||||++|+.+. +
T Consensus 18 ~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 18 KLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFLEN----------STFDEFGHSINDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEECT----------TTTTTCCSCCCEEEECTTSSEEEEEEEEEE
T ss_pred cccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEEec----------hhhhhhcccccceEECCCCCEEEEEECCee
Confidence 46689999986 788876 99999999998873211100 00011122334589999999888864 3
Q ss_pred -------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 82 -------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 82 -------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
+.+.+||+.++ + ...+..+... +...+| +|+|+.|+.+. ++.|++|++.+++
T Consensus 85 ~~r~~~~~~~~~~d~~~~----------------~-~~~l~~~~~~--~~~~~~-SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKR----------------Q-LITEERIPNN--TQWVTW-SPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp CSSSCEEEEEEEEETTTT----------------E-ECCSSCCCTT--EEEEEE-CSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred eEEEccceEEEEEECCCC----------------c-EEEcccCCCc--ceeeEE-CCCCCEEEEEE-CCeEEEEECCCCc
Confidence 67789999887 2 2334445544 888996 99999998885 6899999998877
Q ss_pred eEEEE-eccccc-----------------ceEeEEcCCCCeEEEEecCC-------------------------------
Q 023246 155 LVRLM-VGDRHV-----------------VNQLEPHPHIPMFATCGIEK------------------------------- 185 (285)
Q Consensus 155 ~~~~~-~~h~~~-----------------v~~~~~~p~~~~l~t~~~d~------------------------------- 185 (285)
..... .++... ...+.|+|||++|+.++.|.
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 55421 122221 23589999999998876432
Q ss_pred -----cEEEEcCCC---C---CCCCCCC------CcccceeeccccCCCceEEEeC----CCCeEEEEEecccc
Q 023246 186 -----TVKLWAPMP---T---DFPPLPD------NAEKIMKANKQGREDHSRITLT----PDVIMHVLRLQRRQ 238 (285)
Q Consensus 186 -----~i~iwd~~~---~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~s----~d~~i~vwd~~~~~ 238 (285)
+|++||+.+ + +...+.. +...+....| +++++.++... .+..|++||+.+++
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w-spdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTW-ATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEE-EETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEE-eCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 477788877 5 3223322 3333444444 45555444432 23579999998765
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.71 E-value=4.6e-16 Score=134.57 Aligned_cols=190 Identities=10% Similarity=-0.001 Sum_probs=135.3
Q ss_pred cceeEEEEcCCCCcEEEEeeC---CCcEEEEEccC--CcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC--EE
Q 023246 4 IRLNAIVIDPRNPNYFAVGGS---DEYARVYDIRK--CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE--LL 76 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~---dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~--~l 76 (285)
..|.+++|+|+ .++++++. +...+||.+.. .. ....+.. ...+...+|+|+++ .+
T Consensus 65 ~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g--------------~~~~l~~--~~~~~~~~~s~dg~~~~~ 126 (582)
T 3o4h_A 65 NSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPG--------------EEQRLEA--VKPMRILSGVDTGEAVVF 126 (582)
T ss_dssp SEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTT--------------CCEECTT--SCSBEEEEEEECSSCEEE
T ss_pred cccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCC--------------ccccccC--CCCceeeeeCCCCCeEEE
Confidence 36888999996 67777765 56677877654 21 0011111 11234668888886 45
Q ss_pred EEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC----CeEEEEecCC
Q 023246 77 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWKKKG 152 (285)
Q Consensus 77 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~vwd~~~ 152 (285)
+++.++.+.+||+.++ +. ..+..+. ..+++| +|+|+++++++.+ +.|++||+.+
T Consensus 127 ~s~~~~~~~l~d~~~g----------------~~-~~l~~~~----~~~~~~-spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 127 TGATEDRVALYALDGG----------------GL-RELARLP----GFGFVS-DIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp EEECSSCEEEEEEETT----------------EE-EEEEEES----SCEEEE-EEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred EecCCCCceEEEccCC----------------cE-EEeecCC----CceEEE-CCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 5566666669999876 23 3333332 267776 9999999988776 7899999998
Q ss_pred CceEEEEecccccceEeEEcCCCCeEEEEecCC--cEEEEcCCCCCCCCCCCCcccceeec-------cccCCCceEEEe
Q 023246 153 GKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TVKLWAPMPTDFPPLPDNAEKIMKAN-------KQGREDHSRITL 223 (285)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 223 (285)
++.. .+..|...+..++|+|||++|+++..++ .|++||+.++....+..+...+.... .+++++.+++++
T Consensus 185 g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 185 GGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp CCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred CCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEE
Confidence 8765 6677888899999999999999888888 89999998877554444544443333 034555788899
Q ss_pred CCCCeEEEEEe
Q 023246 224 TPDVIMHVLRL 234 (285)
Q Consensus 224 s~d~~i~vwd~ 234 (285)
+.++.+++|++
T Consensus 264 ~~~g~~~l~~~ 274 (582)
T 3o4h_A 264 RREGRSAVFID 274 (582)
T ss_dssp EETTEEEEEET
T ss_pred EcCCcEEEEEE
Confidence 99999999998
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=4.2e-15 Score=121.88 Aligned_cols=226 Identities=12% Similarity=0.065 Sum_probs=143.7
Q ss_pred EEEcCCCCcEEEEeeC-CCc--EEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcE
Q 023246 9 IVIDPRNPNYFAVGGS-DEY--ARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 84 (285)
Q Consensus 9 ~~~s~~~~~~l~tg~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i 84 (285)
.+|+||+ ..|+.++. ++. |.+||+.+++. ..+..++...+..+.|+|+|+.|+.. .++.|
T Consensus 41 ~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~---------------~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 41 KCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVA---------------TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL 104 (388)
T ss_dssp CCBCTTS-CEEEEEECTTSSCEEEEEETTTCEE---------------EECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred ccCCCCC-CEEEEEEcCCCCceEEEEeCCCCce---------------EEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence 6799987 66776666 674 77788887752 22224455555567899999988885 47899
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEE-ecCCCcEEEE----------------------ecC
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMS----------------------GSD 141 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~----------------------~~~ 141 (285)
++||+.++ +....+..+... +....+ .++++++++. ...
T Consensus 105 ~~~d~~~g----------------~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 105 MRVDLATL----------------EENVVYQVPAEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp EEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred EEEECCCC----------------cceeeeechhhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence 99999887 444444444432 322221 2789988874 234
Q ss_pred CCeEEEEecCCCceEEEEecccccceEeEEcC-CCCeEEEEecC------CcEEEEcCCCCCCCCCCCCcc--cceeecc
Q 023246 142 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNAE--KIMKANK 212 (285)
Q Consensus 142 dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~~--~~~~~~~ 212 (285)
+..|++||+.+++... +..+...+..++|+| +++.|+.+..+ ..|.++++.+.....+..+.. .+....
T Consensus 167 ~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~- 244 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF- 244 (388)
T ss_dssp CEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE-
T ss_pred cceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccce-
Confidence 5789999999886544 444667789999999 99998877653 378888887776655544432 233333
Q ss_pred ccCCCceEEE-eCCC----CeEEEEEecccccceeE---------------eeeccccccCCC---------CCcCeEEE
Q 023246 213 QGREDHSRIT-LTPD----VIMHVLRLQRRQTLAYR---------------ERRYNAADFESD---------EEEGETYL 263 (285)
Q Consensus 213 ~~~~~~~~~~-~s~d----~~i~vwd~~~~~~~~~~---------------~~~~~~~~~~~~---------~~~~~v~~ 263 (285)
++++++.++. ...+ ..|++||+.+++..... .+++++..+... .....+|+
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~ 324 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYV 324 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEE
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEE
Confidence 3555554433 2222 24999999876532211 244555555432 33456888
Q ss_pred eecCCCC
Q 023246 264 LGFSDSD 270 (285)
Q Consensus 264 ~~~~~~~ 270 (285)
++...+.
T Consensus 325 ~d~~~~~ 331 (388)
T 3pe7_A 325 FNMKNGT 331 (388)
T ss_dssp EETTTTE
T ss_pred EeccCCc
Confidence 8876653
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=3.6e-14 Score=113.96 Aligned_cols=232 Identities=12% Similarity=0.114 Sum_probs=150.6
Q ss_pred ccceeEEEEcCCCCcEEEEeeCC------------------------CcEEEEEccCCcccCCcCCCCCcccccccccCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSD------------------------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG 58 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~d------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (285)
-+.+.+++++|++ +++++...+ ++|.+||..+++.. .....
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--------------~~~~~ 87 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--------------QSSGK 87 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--------------EEECT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--------------eccCC
Confidence 3578999999986 888888777 47999998877632 12212
Q ss_pred CCCcceEEEEEecCCCEEEEec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEee---------cccCceeeeeEEE
Q 023246 59 KNNIHITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS---------GHRNSQTVKGVNF 128 (285)
Q Consensus 59 ~h~~~v~~i~~s~~~~~l~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~ 128 (285)
++-..+..++++|+|+++++.. ++.|++|+..... ..+..+. .+.. ....+++
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~---------------~~~~~~~~~~~~g~~~~~~~--~P~~ia~ 150 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE---------------GPLLILGRSMQPGSDQNHFC--QPTDVAV 150 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS---------------CCSEEESBTTBCCCSTTCCS--SEEEEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe---------------EEEEEecccCCCCCCccccC--CCcEEEE
Confidence 4455788999999999888864 8999999986431 1333332 2222 2788997
Q ss_pred ecC-CCcEEEEec-CCCeEEEEecCCCceEEEEecc----------cccceEeEEcCC-CCeEEEEecCCcEEEEcCCCC
Q 023246 129 FGP-NDEYVMSGS-DCGHLFIWKKKGGKLVRLMVGD----------RHVVNQLEPHPH-IPMFATCGIEKTVKLWAPMPT 195 (285)
Q Consensus 129 ~~~-~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~h----------~~~v~~~~~~p~-~~~l~t~~~d~~i~iwd~~~~ 195 (285)
+| +++++++.+ .++.|++|+ .+++.+..+... -..+..++++|+ +.++++...++.|++|++.++
T Consensus 151 -~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G 228 (329)
T 3fvz_A 151 -EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK 228 (329)
T ss_dssp -CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred -eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC
Confidence 88 788888886 699999999 458777776432 234889999998 777777778899999999855
Q ss_pred CC-CCC--CCCcccceeecccc-----CCCceEEEeCCCCeEEEEEecccccceeEeeec----cccccCCCCCcCeEEE
Q 023246 196 DF-PPL--PDNAEKIMKANKQG-----REDHSRITLTPDVIMHVLRLQRRQTLAYRERRY----NAADFESDEEEGETYL 263 (285)
Q Consensus 196 ~~-~~~--~~~~~~~~~~~~~~-----~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~ 263 (285)
++ ..+ ..+...+..+.... .++...++...+..+++|++.+++.+..+.... ....++.++ +|.+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~-dG~lyv 307 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE-DGTVYI 307 (329)
T ss_dssp CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT-TSEEEE
T ss_pred cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC-CCCEEE
Confidence 43 222 22222333222211 012233334455689999988887666542111 122233333 346777
Q ss_pred eecCCC
Q 023246 264 LGFSDS 269 (285)
Q Consensus 264 ~~~~~~ 269 (285)
.+..++
T Consensus 308 ad~~~~ 313 (329)
T 3fvz_A 308 GDAHTN 313 (329)
T ss_dssp EESSSC
T ss_pred EECCCC
Confidence 765544
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=3.9e-14 Score=115.10 Aligned_cols=201 Identities=7% Similarity=0.019 Sum_probs=123.0
Q ss_pred ceeEEEEcCCCCcEEEEeeCC----CcEEEEEccC--CcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSD----EYARVYDIRK--CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS 78 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~d----g~v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s 78 (285)
....++|+|++ .+|++++.+ +.|.+|++.. ++.. ..... ..+......+++ ++++|++
T Consensus 51 ~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~------------~~~~~-~~~~~~p~~~~~--dg~~l~~ 114 (361)
T 3scy_A 51 NPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLH------------LLNTQ-KTMGADPCYLTT--NGKNIVT 114 (361)
T ss_dssp CCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEE------------EEEEE-ECSSSCEEEEEE--CSSEEEE
T ss_pred CCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEE------------EeeEe-ccCCCCcEEEEE--CCCEEEE
Confidence 45678999986 778887775 8999999875 3311 11111 223445677777 7776666
Q ss_pred e--cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEee--cc------cCceeeeeEEEecCCCcEEEE-ecCCCeEEE
Q 023246 79 Y--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS--GH------RNSQTVKGVNFFGPNDEYVMS-GSDCGHLFI 147 (285)
Q Consensus 79 ~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~~i~~~~~~~~~~~~l~~-~~~dg~v~v 147 (285)
+ .++.|.+|++...... . .....+. +. .....+.+++| +|+++++++ ...++.|.+
T Consensus 115 ~~~~~~~v~~~~~~~~g~~----------~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~-spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 115 ANYSGGSITVFPIGQDGAL----------L--PASDVIEFKGSGPDKERQTMPHLHCVRI-TPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EETTTTEEEEEEBCTTSCB----------C--SCSEEEECCCCCSCTTTCSSCCEEEEEE-CTTSSEEEEEETTTTEEEE
T ss_pred EECCCCEEEEEEeCCCCcC----------c--ccceeEEccCCCCCccccCCCcceEEEE-CCCCCEEEEEeCCCCEEEE
Confidence 4 4899999999754100 0 0101111 00 00112577887 999996655 455899999
Q ss_pred EecCCCc-------eE------EEEecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCC------CCCCCcccc
Q 023246 148 WKKKGGK-------LV------RLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFP------PLPDNAEKI 207 (285)
Q Consensus 148 wd~~~~~-------~~------~~~~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~------~~~~~~~~~ 207 (285)
|++.... .. .....+...+..++|+|+++++++++ .++.|.+|++..+.+. ....+....
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 9877433 21 11223445678999999999877766 6899999998755421 111122222
Q ss_pred eeeccccCCCceEE-EeCC-CCeEEEEEec
Q 023246 208 MKANKQGREDHSRI-TLTP-DVIMHVLRLQ 235 (285)
Q Consensus 208 ~~~~~~~~~~~~~~-~~s~-d~~i~vwd~~ 235 (285)
..+. ..+++++++ +... ++.|.+|++.
T Consensus 262 ~~i~-~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 262 GDIH-LSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEE-ECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred ccEE-ECCCCCEEEEECCCCCCEEEEEEEc
Confidence 2332 345566554 4444 5899999996
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=1.1e-14 Score=117.67 Aligned_cols=210 Identities=10% Similarity=0.087 Sum_probs=127.1
Q ss_pred cceeEEEEcCCCCcEEEEee-CCCcEEEEEccC-CcccC--CcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 4 IRLNAIVIDPRNPNYFAVGG-SDEYARVYDIRK-CHWYS--PISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~-~dg~v~iwd~~~-~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
..+..++|+|++ .+|++++ .++.|++|++.. +.... ....... .+. ...+...+.+++|+|+|+++++.
T Consensus 86 ~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~----~p~--~~~~~~~~~~~~~spdg~l~v~~ 158 (347)
T 3hfq_A 86 TPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH----GPR--PEQDGSHIHYTDLTPDNRLAVID 158 (347)
T ss_dssp CCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC----CSS--TTCSSCCEEEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC----CCC--ccccCCCceEEEECCCCcEEEEe
Confidence 356789999986 6666666 789999999963 22110 0000000 000 01234468899999999966665
Q ss_pred c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEE-ecCCCeEEEEecCC--Cce
Q 023246 80 N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKG--GKL 155 (285)
Q Consensus 80 ~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~dg~v~vwd~~~--~~~ 155 (285)
. ++.|.+|++.... .......+..... .....++| +|+++++++ ...++.|.+|++.. ++.
T Consensus 159 ~~~~~v~~~~~~~~g-------------~~~~~~~~~~~~g-~~p~~~~~-spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAG-------------QLSEQSVLTMEAG-FGPRHLVF-SPDGQYAFLAGELSSQIASLKYDTQTGAF 223 (347)
T ss_dssp TTTTEEEEEEECTTS-------------CEEEEEEEECCTT-CCEEEEEE-CTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCCCEEEEEEECCCC-------------cEEEeeeEEcCCC-CCCceEEE-CCCCCEEEEEeCCCCEEEEEEecCCCCce
Confidence 4 8899999997320 0011112222221 12677897 999996655 56789999999874 443
Q ss_pred --EEEEeccc------ccceEeEEcCCCCeE-EEEecCCcEEEEcCCCC-CC---CCCCCCcccceeeccccCCCceEEE
Q 023246 156 --VRLMVGDR------HVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPT-DF---PPLPDNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 156 --~~~~~~h~------~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
+..+.... ..+..++|+|++++| ++...++.|.+|++... .+ ..+..+...+..+.+ .++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~-spdg~~l~v 302 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL-DPTEAFVVV 302 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE-CTTSSEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE-CCCCCEEEE
Confidence 22333222 347889999999986 55567899999998632 21 222222223333333 445555554
Q ss_pred e-CCCCeEEEEEecc
Q 023246 223 L-TPDVIMHVLRLQR 236 (285)
Q Consensus 223 ~-s~d~~i~vwd~~~ 236 (285)
+ ..++.+.+|++..
T Consensus 303 ~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 303 VNQNTDNATLYARDL 317 (347)
T ss_dssp EETTTTEEEEEEECT
T ss_pred EEcCCCcEEEEEEeC
Confidence 4 5569999997653
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=6.2e-15 Score=120.13 Aligned_cols=199 Identities=9% Similarity=0.048 Sum_probs=126.4
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEcc-CCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCE--EEEe--
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIR-KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL--LISY-- 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~--l~s~-- 79 (285)
.+..++|+|++ .+|++++.+ .|.+|++. +++.... ... ..+ +.+..++|+|+|++ ++++
T Consensus 41 ~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~------------~~~-~~~-g~~~~~~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 41 PISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHE------------ASH-PIG-GHPRANDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEE------------EEE-ECC-SSGGGGCTTSCCEEEEEEECSS
T ss_pred CCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEe------------eEe-ecC-CCCccEEECCCCCEEEEEEecC
Confidence 57789999986 788888887 99999997 6653110 000 011 12445889999984 4443
Q ss_pred ------------cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec--ccCceeeeeEEEecCCCcEEEEec-CCCe
Q 023246 80 ------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--HRNSQTVKGVNFFGPNDEYVMSGS-DCGH 144 (285)
Q Consensus 80 ------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~-~dg~ 144 (285)
.++.+.+|++.... +....+.. +.....+.+++| +|+|++++++. .++.
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g---------------~~~~~~~~~~~~~~~~~~~~~~-spdG~~l~~~~~~~~~ 168 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETG---------------KLEKNVQNYEYQENTGIHGMVF-DPTETYLYSADLTANK 168 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTC---------------CEEEEEEEEECCTTCCEEEEEE-CTTSSEEEEEETTTTE
T ss_pred CcceeccceeecCCceEEEEccCCCC---------------cCcceEeeEEeCCCCcceEEEE-CCCCCEEEEEcCCCCE
Confidence 47899999997420 22222221 111123888997 99999887765 4689
Q ss_pred EEEEecC-CCceE--EEEe--cccccceEeEEcCCCCeEEEEec-CCcEEEEcCC--CCCC-------CCCCCC----cc
Q 023246 145 LFIWKKK-GGKLV--RLMV--GDRHVVNQLEPHPHIPMFATCGI-EKTVKLWAPM--PTDF-------PPLPDN----AE 205 (285)
Q Consensus 145 v~vwd~~-~~~~~--~~~~--~h~~~v~~~~~~p~~~~l~t~~~-d~~i~iwd~~--~~~~-------~~~~~~----~~ 205 (285)
|++|++. +++.. ..+. .|...+..++|+|+++++++++. ++.|.+|++. ++++ ..+... ..
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 248 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP 248 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence 9999998 67653 3333 24567899999999999877764 6899999764 3432 122211 11
Q ss_pred ------cceeeccccCCCceEEEeCCC-C-----eEEEEEec
Q 023246 206 ------KIMKANKQGREDHSRITLTPD-V-----IMHVLRLQ 235 (285)
Q Consensus 206 ------~~~~~~~~~~~~~~~~~~s~d-~-----~i~vwd~~ 235 (285)
.+..+...+++++++++...+ . .|.+|++.
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 233333135566665554432 3 89999996
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.65 E-value=5.1e-14 Score=114.43 Aligned_cols=216 Identities=8% Similarity=0.048 Sum_probs=122.7
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ec-CCc
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN-DEL 83 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~-d~~ 83 (285)
...+++ ++..++++...++.|.+|++................. .-......+...+.+++|+|+|++++. +. ++.
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKG-SGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCC-CCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccC-CCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 445666 4533444444689999999975432211100000000 000001223445789999999996655 43 889
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCc---eEee-cccCceeeeeEEEecCCCcEEEEec-CCCeEEEEecCCCce--E
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYS-GHRNSQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKL--V 156 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~--~ 156 (285)
|.+|++......... . ..... .... ... .....++| +|+++++++++ .++.|.+|++.+++. +
T Consensus 179 v~v~~~~~~~~~~~~-----~--~l~~~~~~~~~~~~~~--~~~~~~~~-spdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 179 IHKFNINPNANADNK-----E--KFLTKGTPEAFKVAPG--SGPRHLIF-NSDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EEEEEECTTCCTTTC-----C--CCEEEEEEEEEECCTT--CCEEEEEE-CTTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred EEEEEEcCCCCcccc-----c--ceeecccccceecCCC--CCCeEEEE-cCCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 999998764100000 0 00000 1111 122 22678997 99999887666 689999999987754 2
Q ss_pred EEEe---cccccceEeEEcCCCCeEEEEec--CCcEEEEcCC--CCCCC---CCCCCcccceeeccccCCCceEEEe-CC
Q 023246 157 RLMV---GDRHVVNQLEPHPHIPMFATCGI--EKTVKLWAPM--PTDFP---PLPDNAEKIMKANKQGREDHSRITL-TP 225 (285)
Q Consensus 157 ~~~~---~h~~~v~~~~~~p~~~~l~t~~~--d~~i~iwd~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-s~ 225 (285)
..+. .+...+..++|+|++++|+++.. ++.|.+|++. .+.+. .+.. ...+..+.+ .+++++++++ ..
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~-spdg~~l~~~~~~ 326 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII-TPNGKYLLVACRD 326 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE-CTTSCEEEEEETT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE-CCCCCEEEEEECC
Confidence 2232 23345679999999999866664 4899999985 33321 1221 122223333 4455555554 46
Q ss_pred CCeEEEEEecc
Q 023246 226 DVIMHVLRLQR 236 (285)
Q Consensus 226 d~~i~vwd~~~ 236 (285)
++.+.+|++..
T Consensus 327 ~~~v~v~~~d~ 337 (361)
T 3scy_A 327 TNVIQIFERDQ 337 (361)
T ss_dssp TTEEEEEEECT
T ss_pred CCCEEEEEEEC
Confidence 79999987753
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=6.8e-15 Score=130.69 Aligned_cols=206 Identities=8% Similarity=0.053 Sum_probs=127.3
Q ss_pred eEEEEcCCCCcEEEEeeCC---------CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 7 NAIVIDPRNPNYFAVGGSD---------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
..++||||+ .+|+.++.+ +.+.+||+.+++.. .+ ..|...+..++|||||+.||
T Consensus 65 ~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~---------------~l-~~~~~~~~~~~~SPdG~~la 127 (740)
T 4a5s_A 65 NDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLI---------------TE-ERIPNNTQWVTWSPVGHKLA 127 (740)
T ss_dssp CEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---------------CS-SCCCTTEEEEEECSSTTCEE
T ss_pred cceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCcEE---------------Ec-ccCCCcceeeEECCCCCEEE
Confidence 348899986 788888776 56679999988632 11 45667899999999999999
Q ss_pred EecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc-------eeeeeEEEecCCCcEEEEecCC--------
Q 023246 78 SYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDEYVMSGSDC-------- 142 (285)
Q Consensus 78 s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~~d-------- 142 (285)
.+.++.|++|++.++... .+.. .......+.++... .....+.| +|+|++|+.++.|
T Consensus 128 ~~~~~~i~~~~~~~~~~~---~lt~----~g~~~~~~~g~~~~v~~ee~~~~~~~~~w-SpDg~~la~~~~d~~~v~~~~ 199 (740)
T 4a5s_A 128 YVWNNDIYVKIEPNLPSY---RITW----TGKEDIIYNGITDWVYEEEVFSAYSALWW-SPNGTFLAYAQFNDTEVPLIE 199 (740)
T ss_dssp EEETTEEEEESSTTSCCE---ECCS----CCBTTTEEESBCCHHHHHHTSSSSBCEEE-CTTSSEEEEEEEECTTCCEEE
T ss_pred EEECCeEEEEECCCCceE---EEcC----CCCccceecCcccccccchhcCCCcceEE-CCCCCEEEEEEEcccCCceEE
Confidence 988999999999876100 0000 00000111111100 00234765 9999999876422
Q ss_pred ----------------------------CeEEEEecCC---Cc--eEEEEe------cccccceEeEEcCCCCeEEEEec
Q 023246 143 ----------------------------GHLFIWKKKG---GK--LVRLMV------GDRHVVNQLEPHPHIPMFATCGI 183 (285)
Q Consensus 143 ----------------------------g~v~vwd~~~---~~--~~~~~~------~h~~~v~~~~~~p~~~~l~t~~~ 183 (285)
..|++||+.+ ++ ....+. +|...+..++|+|+++.++....
T Consensus 200 ~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~ 279 (740)
T 4a5s_A 200 YSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLR 279 (740)
T ss_dssp EEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeC
Confidence 1588999988 73 233343 27778999999999997665532
Q ss_pred ----CCcEEEEcCCCCC-------CCCC--CCCcccce-----eeccccCCCceEE-EeC-CC--CeEEEEEecccc
Q 023246 184 ----EKTVKLWAPMPTD-------FPPL--PDNAEKIM-----KANKQGREDHSRI-TLT-PD--VIMHVLRLQRRQ 238 (285)
Q Consensus 184 ----d~~i~iwd~~~~~-------~~~~--~~~~~~~~-----~~~~~~~~~~~~~-~~s-~d--~~i~vwd~~~~~ 238 (285)
+..|++||+.++. ...+ ..+...+. ... ++++++.++ ..+ .+ ..|++||+..+.
T Consensus 280 r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~-fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH-FTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE-ECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce-EcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 3379999997765 2222 22332221 222 244555444 444 33 467777776543
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=8.5e-14 Score=109.41 Aligned_cols=196 Identities=10% Similarity=0.161 Sum_probs=132.1
Q ss_pred ceeEEEEc-CCCCcEEEEeeC-CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cC
Q 023246 5 RLNAIVID-PRNPNYFAVGGS-DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-ND 81 (285)
Q Consensus 5 ~v~~~~~s-~~~~~~l~tg~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d 81 (285)
.+.+++++ ++ +.++++... ++.|++|| .+++.. ..+...+...+..++++++|+++++. .+
T Consensus 78 ~p~~i~~~~~~-g~l~v~~~~~~~~i~~~d-~~g~~~--------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 78 YPNRVAVVRNS-GDIIVTERSPTHQIQIYN-QYGQFV--------------RKFGATILQHPRGVTVDNKGRIIVVECKV 141 (286)
T ss_dssp SEEEEEEETTT-TEEEEEECGGGCEEEEEC-TTSCEE--------------EEECTTTCSCEEEEEECTTSCEEEEETTT
T ss_pred CceEEEEEcCC-CeEEEEcCCCCCEEEEEC-CCCcEE--------------EEecCccCCCceEEEEeCCCCEEEEECCC
Confidence 56789994 65 366666643 89999999 445421 11112344568899999999988875 48
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|.+|+... +.+..+........+.++++ +++++++++...++.|++||.. ++.+..+..
T Consensus 142 ~~i~~~~~~g-----------------~~~~~~~~~~~~~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 202 (286)
T 1q7f_A 142 MRVIIFDQNG-----------------NVLHKFGCSKHLEFPNGVVV-NDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG 202 (286)
T ss_dssp TEEEEECTTS-----------------CEEEEEECTTTCSSEEEEEE-CSSSEEEEEEGGGTEEEEEETT-CCEEEEESC
T ss_pred CEEEEEcCCC-----------------CEEEEeCCCCccCCcEEEEE-CCCCCEEEEECCCCEEEEEcCC-CCEEEEEcc
Confidence 8999999653 24444432111123788997 9999988888889999999984 667766654
Q ss_pred c--cccceEeEEcCCCCeEEEEecCC-cEEEEcCCCCCCCCCCCCcc--cceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 162 D--RHVVNQLEPHPHIPMFATCGIEK-TVKLWAPMPTDFPPLPDNAE--KIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 162 h--~~~v~~~~~~p~~~~l~t~~~d~-~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
+ ...+..++++|+++++++...++ .|.+|+.....+..+..+.. .+..+.. .+++.++++ +.++.|++|++..
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~-~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVAL-MDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEE-ETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEE-CCCCcEEEE-CCCCeEEEEEccc
Confidence 3 35788999999999888887775 99999976554433322211 1222222 334456666 5689999998755
Q ss_pred c
Q 023246 237 R 237 (285)
Q Consensus 237 ~ 237 (285)
.
T Consensus 281 ~ 281 (286)
T 1q7f_A 281 L 281 (286)
T ss_dssp C
T ss_pred c
Confidence 3
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.63 E-value=3.1e-14 Score=116.01 Aligned_cols=200 Identities=11% Similarity=0.058 Sum_probs=126.1
Q ss_pred eeEEEEcCCCCc--EEEEee-------------CCCcEEEEEccC-CcccCCcCCCCCcccccccccCCCCCcceEEEEE
Q 023246 6 LNAIVIDPRNPN--YFAVGG-------------SDEYARVYDIRK-CHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY 69 (285)
Q Consensus 6 v~~~~~s~~~~~--~l~tg~-------------~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~ 69 (285)
...++|+|++ . +++++. .++++.+|++.. ++.... .......+...+.+++|
T Consensus 85 ~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~~ 152 (365)
T 1jof_A 85 PRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKN-----------VQNYEYQENTGIHGMVF 152 (365)
T ss_dssp GGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEE-----------EEEEECCTTCCEEEEEE
T ss_pred CccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcce-----------EeeEEeCCCCcceEEEE
Confidence 4567899986 5 355553 689999999973 442100 00000124567899999
Q ss_pred ecCCCEEEEe--cCCcEEEEEcC-CCCCCCCCCCCCccccCCCC--ceEeec--ccCceeeeeEEEecCCCcEEEEecC-
Q 023246 70 SNTSELLISY--NDELVYLFEKN-MGLGPSPLSLSPEDLQKREE--PQVYSG--HRNSQTVKGVNFFGPNDEYVMSGSD- 141 (285)
Q Consensus 70 s~~~~~l~s~--~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~- 141 (285)
+|+|++|+++ .++.|++|++. ++ +. +..+.. +.. .+..++| +|+++++++++.
T Consensus 153 spdG~~l~~~~~~~~~v~~~~~~~~g----------------~~~~~~~~~~~~~g~--~p~~~~~-spdg~~l~v~~~~ 213 (365)
T 1jof_A 153 DPTETYLYSADLTANKLWTHRKLASG----------------EVELVGSVDAPDPGD--HPRWVAM-HPTGNYLYALMEA 213 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTS----------------CEEEEEEEECSSTTC--CEEEEEE-CTTSSEEEEEETT
T ss_pred CCCCCEEEEEcCCCCEEEEEEECCCC----------------CEEEeeeEecCCCCC--CCCEeEE-CCCCCEEEEEECC
Confidence 9999977764 36899999997 44 22 122321 222 3788997 999998877664
Q ss_pred CCeEEEEecC--CCceEE---EEe-------cccc------cceEeE-EcCCCCeEEEEecC-C-----cEEEEcCC-CC
Q 023246 142 CGHLFIWKKK--GGKLVR---LMV-------GDRH------VVNQLE-PHPHIPMFATCGIE-K-----TVKLWAPM-PT 195 (285)
Q Consensus 142 dg~v~vwd~~--~~~~~~---~~~-------~h~~------~v~~~~-~~p~~~~l~t~~~d-~-----~i~iwd~~-~~ 195 (285)
++.|.+|++. +++... .+. +|.. .+..++ |+|++++|++++.+ . .|.+|++. .+
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g 293 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC
Confidence 7899999765 565432 222 1122 478899 99999987766543 2 89999985 44
Q ss_pred CCCC----CCCCcccceeeccccC---CCceEEEeCC-CCeEEEEEeccc
Q 023246 196 DFPP----LPDNAEKIMKANKQGR---EDHSRITLTP-DVIMHVLRLQRR 237 (285)
Q Consensus 196 ~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~s~-d~~i~vwd~~~~ 237 (285)
++.. ...+......+.. .+ +++++++++. ++.|.+|++...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~a~-sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 294 SIEKQLFLSPTPTSGGHSNAV-SPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEEEEEEEECSSCCTTCCCE-EECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CEEEeeeeeecCCCCccccee-cCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 4321 1111111212211 23 4566766665 599999998776
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=6.5e-14 Score=122.88 Aligned_cols=155 Identities=10% Similarity=0.007 Sum_probs=106.5
Q ss_pred CCcceEEEEEecCCCEEEEec-C----------CcEEEEEcCC------CCCCCCCCCCCccccCCCCceEee-cccCce
Q 023246 60 NNIHITGLAYSNTSELLISYN-D----------ELVYLFEKNM------GLGPSPLSLSPEDLQKREEPQVYS-GHRNSQ 121 (285)
Q Consensus 60 h~~~v~~i~~s~~~~~l~s~~-d----------~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 121 (285)
|...+..++|+|+|+.|+.++ + ..|++||+.+ + ....+. .+..
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------~~~~l~~~~~~-- 188 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS-----------------AVRELSDDAHR-- 188 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG-----------------GSEESSCSCSS--
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC-----------------ceeEEEecCCC--
Confidence 677889999999999887753 4 5899999987 4 223333 3333
Q ss_pred eeeeEEEecCCCcEEEEecCC--------CeEEEEecC-CC---ceEEEEecccccceEeEEcCCCCeEEEEecCC--cE
Q 023246 122 TVKGVNFFGPNDEYVMSGSDC--------GHLFIWKKK-GG---KLVRLMVGDRHVVNQLEPHPHIPMFATCGIEK--TV 187 (285)
Q Consensus 122 ~i~~~~~~~~~~~~l~~~~~d--------g~v~vwd~~-~~---~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~--~i 187 (285)
.+..++| +|+|++|+.++.+ ..|++||+. ++ +.......|...+..++|+|++++++++..++ .|
T Consensus 189 ~~~~~~~-SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 189 FVTGPRL-SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp EECCCEE-CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred cccCceE-CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 3778886 9999999877744 489999998 56 44444445578899999999999888888888 66
Q ss_pred EEEcCCCCCCCCCCCCcccceee--------ccccCCCceEEEeCCCCeEEEEEec
Q 023246 188 KLWAPMPTDFPPLPDNAEKIMKA--------NKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 188 ~iwd~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
.+|++.++....+..+....... .....+++++++++. +.+++|.+.
T Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 268 HRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred EEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 67777666543333222222111 111235667778887 999999554
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=4.5e-13 Score=105.26 Aligned_cols=199 Identities=8% Similarity=0.151 Sum_probs=136.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEe-cCCCEEEEe-c-C
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS-NTSELLISY-N-D 81 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s-~~~~~l~s~-~-d 81 (285)
...+++++|++ +++++...++.|.+||.. ++.... +.......+|...+..+++. ++++++++. . +
T Consensus 31 ~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~---------~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~ 99 (286)
T 1q7f_A 31 EPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQ---------FGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT 99 (286)
T ss_dssp CEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEE---------ECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG
T ss_pred CCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEE---------ecccCCCcccccCceEEEEEcCCCeEEEEcCCCC
Confidence 56789999986 788888889999999987 432111 11111112455678999995 777777775 3 8
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe-
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV- 160 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~- 160 (285)
+.|.+|+.. + +.+..+.... ...+.++++ +++++++++...++.|++||.. ++.+..+.
T Consensus 100 ~~i~~~d~~-g----------------~~~~~~~~~~-~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 159 (286)
T 1q7f_A 100 HQIQIYNQY-G----------------QFVRKFGATI-LQHPRGVTV-DNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC 159 (286)
T ss_dssp CEEEEECTT-S----------------CEEEEECTTT-CSCEEEEEE-CTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred CEEEEECCC-C----------------cEEEEecCcc-CCCceEEEE-eCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC
Confidence 899999943 3 3444443221 123788997 9999988888888999999965 66666664
Q ss_pred -cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCC--cccceeeccccCCCceEEEeCCCC-eEEEEEec
Q 023246 161 -GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN--AEKIMKANKQGREDHSRITLTPDV-IMHVLRLQ 235 (285)
Q Consensus 161 -~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~d~-~i~vwd~~ 235 (285)
.+...+..++++|+++++++...++.|++|+.....+..+... ...+..+. ...++.++++...++ .|.+|+..
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVG-INSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECCC
Confidence 3445689999999999888878889999999866544333222 12222222 233456777777775 99999954
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.60 E-value=4.1e-14 Score=115.95 Aligned_cols=197 Identities=9% Similarity=0.038 Sum_probs=123.6
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEE--EecCCCEEEEe----
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLA--YSNTSELLISY---- 79 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~--~s~~~~~l~s~---- 79 (285)
+..++|+|++ ..|+.++.++.|++||+.+++... +...+...+.... ++|++++++..
T Consensus 83 ~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~---------------~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 146 (388)
T 3pe7_A 83 TFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENV---------------VYQVPAEWVGYGTWVANSDCTKLVGIEIRR 146 (388)
T ss_dssp SSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEE---------------EEECCTTEEEEEEEEECTTSSEEEEEEEEG
T ss_pred ccceEEcCCC-CEEEEEeCCCeEEEEECCCCccee---------------eeechhhcccccceeECCCCCeeccccccC
Confidence 3467899986 889999989999999999886311 1122333343333 48899887741
Q ss_pred -------------------cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEe
Q 023246 80 -------------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSG 139 (285)
Q Consensus 80 -------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~ 139 (285)
.+..|.+||+.++ ....+..+... +..+.| +| +++.|+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g-----------------~~~~l~~~~~~--~~~~~~-sp~dg~~l~~~ 206 (388)
T 3pe7_A 147 EDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG-----------------ESTVILQENQW--LGHPIY-RPYDDSTVAFC 206 (388)
T ss_dssp GGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC-----------------CEEEEEEESSC--EEEEEE-ETTEEEEEEEE
T ss_pred cccccccccchhhhhhccCCcceEEEEECCCC-----------------ceEEeecCCcc--ccccEE-CCCCCCEEEEE
Confidence 2467999999876 33444444443 788886 99 99988776
Q ss_pred cCC------CeEEEEecCCCceEEEEeccc--ccceEeEEcCCCCeEEEEec-CC----cEEEEcCCCCCCCCC---CCC
Q 023246 140 SDC------GHLFIWKKKGGKLVRLMVGDR--HVVNQLEPHPHIPMFATCGI-EK----TVKLWAPMPTDFPPL---PDN 203 (285)
Q Consensus 140 ~~d------g~v~vwd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~t~~~-d~----~i~iwd~~~~~~~~~---~~~ 203 (285)
..+ ..|.++|+..++. ..+..+. ..+..++|+|+|+.|+..+. ++ .|.+||+.+++...+ ..+
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 285 (388)
T 3pe7_A 207 HEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC 285 (388)
T ss_dssp ECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE
T ss_pred EecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc
Confidence 653 3788888875544 3444343 35778899999998765543 22 399999988764322 210
Q ss_pred cccc--eeeccccCCCceEEE-e--------CCCCeEEEEEeccccc
Q 023246 204 AEKI--MKANKQGREDHSRIT-L--------TPDVIMHVLRLQRRQT 239 (285)
Q Consensus 204 ~~~~--~~~~~~~~~~~~~~~-~--------s~d~~i~vwd~~~~~~ 239 (285)
.... .....++++++.++. . ..+..|++||+.+++.
T Consensus 286 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 286 SHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred eeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 0000 000012333433332 2 4567999999987654
No 171
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=2.3e-13 Score=106.28 Aligned_cols=190 Identities=7% Similarity=0.003 Sum_probs=137.1
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCC-cceEEEEEecCCCEEEEecCCcEEEEEcCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNN-IHITGLAYSNTSELLISYNDELVYLFEKNMGLGP 95 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~ 95 (285)
++|++++.++.|.+||..+++.+.. + ..+. ..+.++.++|+|++++ +.++.|..||. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~--------------~-~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G--- 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWE--------------Y-PLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DG--- 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEE--------------E-ECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TS---
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEE--------------e-CCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CC---
Confidence 7999999999999999988984322 1 1222 3577899999999888 45778999998 56
Q ss_pred CCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC-CCeEEEEecCCCceEEEEec------ccccceE
Q 023246 96 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVG------DRHVVNQ 168 (285)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~------h~~~v~~ 168 (285)
+.+..+..+.. ..+.++.+ .++++.+++.+. .+.|..+|. +++.+..+.. +......
T Consensus 66 -------------~~~W~~~~~~~-~~~~~~~~-~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 66 -------------RELWNIAAPAG-CEMQTARI-LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp -------------CEEEEEECCTT-CEEEEEEE-CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred -------------CEEEEEcCCCC-ccccccEE-CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 57777765421 23778886 899999999877 888888886 6888777652 2234566
Q ss_pred eEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 169 LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 169 ~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
+++.++++++++...++.|..||.+...+.++.... ..... ....++..+++...++.|..+|..+++.+-.+.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~-~~~~~-~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG-TPFSS-AFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSS-CCCEE-EECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred ceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCC-Cccce-eEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 788999999999999999999999843333333221 12222 123455677878878889999988776665553
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.58 E-value=6.6e-13 Score=103.26 Aligned_cols=197 Identities=8% Similarity=-0.031 Sum_probs=129.1
Q ss_pred ceeEEEEcCCCCcEEE-EeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCc
Q 023246 5 RLNAIVIDPRNPNYFA-VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~-tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~ 83 (285)
...+++++|++ ++++ +...++.|.+|+..+.... .....+...+.+++++++|+++++..++.
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~---------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 88 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTT---------------VLPFNGLYQPQGLAVDGAGTVYVTDFNNR 88 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----E---------------ECCCCSCCSCCCEEECTTCCEEEEETTTE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccc---------------eEeeCCcCCcceeEECCCCCEEEEcCCCE
Confidence 56789999976 6777 5577899999997654311 01012234577899999999777755889
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEeccc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 163 (285)
|.+||.... ....+.... ...+.++++ +++++++++...++.|.+|+..+...........
T Consensus 89 i~~~d~~~~-----------------~~~~~~~~~-~~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 149 (270)
T 1rwi_B 89 VVTLAAGSN-----------------NQTVLPFDG-LNYPEGLAV-DTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL 149 (270)
T ss_dssp EEEECTTCS-----------------CCEECCCCS-CSSEEEEEE-CTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC
T ss_pred EEEEeCCCc-----------------eEeeeecCC-cCCCcceEE-CCCCCEEEEECCCCEEEEEECCCceeEeeccccC
Confidence 999998654 222222111 122788997 8999988887788999999876554443323333
Q ss_pred ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCC-CCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 164 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL-PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
..+..++++|+++++++...++.|.+|+..+...... ......+..+.. ..++.++++...++.|.+|+....
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~-d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAV-DEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEE-CTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEE-CCCCCEEEEECCCCcEEEEcCCCC
Confidence 4688999999998877777788999999877653221 111122222222 334457777777889999987654
No 173
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=3.2e-13 Score=109.46 Aligned_cols=183 Identities=8% Similarity=0.017 Sum_probs=126.0
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecC
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 81 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d 81 (285)
+..+++.+++++.. .++++|+.+ .+++|++...+.... ..... +..... ..+.. |+.++| ++.+|+.+.+
T Consensus 36 ~~~~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~-~~~~~---~~~~~~-~~lp~-V~~l~f--d~~~L~v~~~ 105 (388)
T 1xip_A 36 PFASLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHIT-SDSTP---LTFKWE-KEIPD-VIFVCF--HGDQVLVSTR 105 (388)
T ss_dssp CSSCCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHH-SSSCC---CCCSEE-EECTT-EEEEEE--ETTEEEEEES
T ss_pred CcccccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhc-ccccc---ccceEE-eeCCC-eeEEEE--CCCEEEEEcC
Confidence 45679999999975 788888887 556699865431000 00000 111111 23455 999999 8888888899
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.|++||+.+. ........+... +.++.++.|+ +++++.||.|.+||+.+++...
T Consensus 106 ~~l~v~dv~sl----------------~~~~~~~~~~~~--v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~---- 160 (388)
T 1xip_A 106 NALYSLDLEEL----------------SEFRTVTSFEKP--VFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ---- 160 (388)
T ss_dssp SEEEEEESSST----------------TCEEEEEECSSC--EEEEEECSSE---EEEEETTSEEEEEETTTCCEEE----
T ss_pred CcEEEEEchhh----------------hccCccceeecc--eeeEEecCCC---EEEEECCCCEEEEEccCCcccc----
Confidence 99999999876 333445555544 7787764332 8888999999999999887653
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC---CCC------C---CCcccceeeccccCCCceEEE
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF---PPL------P---DNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~---~~~------~---~~~~~~~~~~~~~~~~~~~~~ 222 (285)
+...|++++|+|+| ++.+..||++++|++....+ ..+ . ++...+..+.|.. +..++++
T Consensus 161 ~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 161 LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 34689999999999 67788999999998876652 222 1 2456677776654 4444444
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.57 E-value=2.5e-13 Score=119.21 Aligned_cols=200 Identities=11% Similarity=0.116 Sum_probs=128.9
Q ss_pred cceeEEEEcCCCCcEEEEeeCC----------CcEEEEEccC------CcccCCcCCCCCcccccccccCCCCCcceEEE
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSD----------EYARVYDIRK------CHWYSPISSDTPVDTFCPRHLIGKNNIHITGL 67 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~d----------g~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i 67 (285)
..+.+++|+||+ ..|++++.+ ..|++||+.+ ++ ...+...+...+..+
T Consensus 130 ~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~l~~~~~~~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---------------VRELSDDAHRFVTGP 193 (662)
T ss_dssp EEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---------------SEESSCSCSSEECCC
T ss_pred ccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---------------eeEEEecCCCcccCc
Confidence 467889999986 788877766 5899999987 43 122210344577889
Q ss_pred EEecCCCEEEEe-cC--------CcEEEEEcCC-CCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEE
Q 023246 68 AYSNTSELLISY-ND--------ELVYLFEKNM-GLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYV 136 (285)
Q Consensus 68 ~~s~~~~~l~s~-~d--------~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l 136 (285)
+|||||++|+.. .+ ..|++||+.. +. ......+. .+... +..+.| +|+|+++
T Consensus 194 ~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~--------------~~~~~~l~~~~~~~--~~~~~~-spdg~l~ 256 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR--------------FADTRTLLGGPEEA--IAQAEW-APDGSLI 256 (662)
T ss_dssp EECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC--------------EEEEEEEEEETTBC--EEEEEE-CTTSCEE
T ss_pred eECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc--------------ccccEEeCCCCCce--EcceEE-CCCCeEE
Confidence 999999988764 33 3799999973 30 00223333 33433 888986 9999988
Q ss_pred EEecCCC--eEEEEecCCCceEEEEeccccc--------ceEeEEcCCCCeEEEEecCCcEEEE--cCCCCCCCCCCCCc
Q 023246 137 MSGSDCG--HLFIWKKKGGKLVRLMVGDRHV--------VNQLEPHPHIPMFATCGIEKTVKLW--APMPTDFPPLPDNA 204 (285)
Q Consensus 137 ~~~~~dg--~v~vwd~~~~~~~~~~~~h~~~--------v~~~~~~p~~~~l~t~~~d~~i~iw--d~~~~~~~~~~~~~ 204 (285)
+++..++ .|++||+.+++.......+... +..++|+|++++++++.. +.+++| |+.++.+..+..+.
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~ 335 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPW 335 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSC
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCC
Confidence 8888888 7777787777655433333222 567889999999999988 999999 66666555555554
Q ss_pred ccceeeccccCCCce-EEEeCCCC--eEEEEEecccc
Q 023246 205 EKIMKANKQGREDHS-RITLTPDV--IMHVLRLQRRQ 238 (285)
Q Consensus 205 ~~~~~~~~~~~~~~~-~~~~s~d~--~i~vwd~~~~~ 238 (285)
..+... +......+ +++.+.+. .|+++|+.+++
T Consensus 336 ~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 336 TEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp CEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 443322 11222333 34445554 45555554544
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=3.1e-12 Score=102.69 Aligned_cols=226 Identities=8% Similarity=0.056 Sum_probs=139.9
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C--
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D-- 81 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d-- 81 (285)
.+.+++|+|++ .+++++..++.|.+||..+++.. . +...+...+.+++++++|+++++.. +
T Consensus 46 ~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~--------------~-~~~~~~~~~~~i~~~~dg~l~v~~~~~~~ 109 (333)
T 2dg1_A 46 QLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIK--------------R-PFVSHKANPAAIKIHKDGRLFVCYLGDFK 109 (333)
T ss_dssp CEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE--------------E-EEECSSSSEEEEEECTTSCEEEEECTTSS
T ss_pred cccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEE--------------E-EeeCCCCCcceEEECCCCcEEEEeCCCCC
Confidence 45789999976 78888888999999999877521 1 1113456799999999999888764 4
Q ss_pred --CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC------CCeEEEEecCCC
Q 023246 82 --ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKKKGG 153 (285)
Q Consensus 82 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~vwd~~~~ 153 (285)
+.|.+||..+. .....+........+..+.+ +++++++++... .+.|+.+|..++
T Consensus 110 ~~~~i~~~d~~~~----------------~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 110 STGGIFAATENGD----------------NLQDIIEDLSTAYCIDDMVF-DSKGGFYFTDFRGYSTNPLGGVYYVSPDFR 172 (333)
T ss_dssp SCCEEEEECTTSC----------------SCEEEECSSSSCCCEEEEEE-CTTSCEEEEECCCBTTBCCEEEEEECTTSC
T ss_pred CCceEEEEeCCCC----------------EEEEEEccCccCCcccceEE-CCCCCEEEEeccccccCCCceEEEEeCCCC
Confidence 58999998765 22222221111123888997 999988887654 367777887655
Q ss_pred ceEEEEecccccceEeEEcCCCCeE-EEEecCCcEEEEcCCC-CC-CCC--------CCCCcccceeeccccCCCceEEE
Q 023246 154 KLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMP-TD-FPP--------LPDNAEKIMKANKQGREDHSRIT 222 (285)
Q Consensus 154 ~~~~~~~~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~-~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
+... +..+...+..++|+|+++.+ ++...++.|.+|+++. +. +.. +.++ ..+..+ ....++.++++
T Consensus 173 ~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i-~~d~~G~l~v~ 249 (333)
T 2dg1_A 173 TVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSC-CIDSDDNLYVA 249 (333)
T ss_dssp CEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEE-EEBTTCCEEEE
T ss_pred EEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCce-EECCCCCEEEE
Confidence 5443 33334567899999999865 4555678999999853 22 211 1111 111111 12334556666
Q ss_pred eCCCCeEEEEEecccccceeEeeec-------cccccCCCCCcCeEEEeecC
Q 023246 223 LTPDVIMHVLRLQRRQTLAYRERRY-------NAADFESDEEEGETYLLGFS 267 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~ 267 (285)
...++.|.+||.. ++.+..+.... ....+...++.+.+|+....
T Consensus 250 ~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 250 MYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 6677899999874 43333332211 12233333444467765443
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.55 E-value=8.4e-13 Score=105.96 Aligned_cols=206 Identities=11% Similarity=0.060 Sum_probs=134.9
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCc-ccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEe--c
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCH-WYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISY--N 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~--~ 80 (285)
....++++|++ +++++...++.|++|+..... .+..+... ........+......++++| ++.++++. .
T Consensus 92 ~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~------~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 92 LPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRS------MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp SEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBT------TBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred CceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEeccc------CCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 46789999976 788888889999999986432 11111000 00000123455789999999 78888885 4
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC--------ceeeeeEEEecCC-CcEEEEecCCCeEEEEecC
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--------SQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKK 151 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~ 151 (285)
++.|++|+.. + ..+..+..... ......+++ +++ ++++++...++.|++|+..
T Consensus 165 ~~~I~~~~~~-g----------------~~~~~~~~~g~~~~~~~~~~~~p~gia~-d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 165 NSRIVQFSPS-G----------------KFVTQWGEESSGSSPRPGQFSVPHSLAL-VPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CCEEEEECTT-S----------------CEEEEECEECCSSSCCTTEESCEEEEEE-ETTTTEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEcCC-C----------------CEEEEeccCCCCCCCCCcccCCCcEEEE-ECCCCEEEEEECCCCEEEEEECC
Confidence 8999999954 3 24444431110 012678997 888 7888888889999999999
Q ss_pred CCceEEEEe--cccccceEeEEcCCCCeEEEE-------ecCCcEEEEcCCCCCCCC-C---CCCcccceeeccccCCCc
Q 023246 152 GGKLVRLMV--GDRHVVNQLEPHPHIPMFATC-------GIEKTVKLWAPMPTDFPP-L---PDNAEKIMKANKQGREDH 218 (285)
Q Consensus 152 ~~~~~~~~~--~h~~~v~~~~~~p~~~~l~t~-------~~d~~i~iwd~~~~~~~~-~---~~~~~~~~~~~~~~~~~~ 218 (285)
+++.+..+. .+...+..++++| +..+++. ..+..|++|++..+++.. + ..+......+.. .+++.
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~-~~dG~ 304 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA-SEDGT 304 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE-CTTSE
T ss_pred CCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE-CCCCC
Confidence 899988884 3556788999999 3333333 334589999987776422 2 122222333322 33446
Q ss_pred eEEEeCCCCeEEEEEeccc
Q 023246 219 SRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~~~ 237 (285)
++++...++.|++|++...
T Consensus 305 lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEESSSCCEEEEEEEEC
T ss_pred EEEEECCCCEEEEEeCCcc
Confidence 7777777888888887653
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=2.2e-12 Score=100.27 Aligned_cols=198 Identities=9% Similarity=0.011 Sum_probs=132.1
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~ 83 (285)
.+.++++++++ +++++.. ++.|.+||....... .........+..++++++|+++++. .++.
T Consensus 68 ~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~~---------------~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 130 (270)
T 1rwi_B 68 QPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQT---------------VLPFDGLNYPEGLAVDTQGAVYVADRGNNR 130 (270)
T ss_dssp SCCCEEECTTC-CEEEEET-TTEEEEECTTCSCCE---------------ECCCCSCSSEEEEEECTTCCEEEEEGGGTE
T ss_pred CcceeEECCCC-CEEEEcC-CCEEEEEeCCCceEe---------------eeecCCcCCCcceEECCCCCEEEEECCCCE
Confidence 56789999975 6666655 889999998754311 1111223468899999999977775 4788
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEeccc
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 163 (285)
|.+|+..+. .......... ..+.++++ +++++++++...++.|.+||............+.
T Consensus 131 i~~~~~~~~----------------~~~~~~~~~~--~~p~~i~~-~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (270)
T 1rwi_B 131 VVKLAAGSK----------------TQTVLPFTGL--NDPDGVAV-DNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI 191 (270)
T ss_dssp EEEECTTCC----------------SCEECCCCSC--CSCCCEEE-CTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC
T ss_pred EEEEECCCc----------------eeEeeccccC--CCceeEEE-eCCCCEEEEECCCCEEEEEecCCCceEeecccCC
Confidence 999975443 1111111111 12678887 8999988887778999999988666544333333
Q ss_pred ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 164 HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 164 ~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
..+..+++++++..+++...++.|.+|++.+....... .+...+..+.. ..++.++++...++.|+++++...+.
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~-~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV-DSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE-CTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE-CCCCCEEEEECCCCEEEEEcCCCccc
Confidence 67889999999977777777889999999765543222 11122223322 33445777778888888888776654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.54 E-value=1.9e-12 Score=102.16 Aligned_cols=198 Identities=12% Similarity=0.042 Sum_probs=128.2
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~~i 84 (285)
..+++|+|++..+++++..++.|..|+..++ .. .+ ..+...+.+++++++|+++++.. ++.|
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~----------~~------~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS----------PE------MHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE----------EE------ESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE----------EE------ECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 4679999986348889999999999998865 21 01 23456789999999999888865 6899
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccC--ceeeeeEEEecCCCcEEEE----ec-------------CCCeE
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKGVNFFGPNDEYVMS----GS-------------DCGHL 145 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~~----~~-------------~dg~v 145 (285)
.+||..++ +.......... ...+..+++ +++|+++++ |+ ..+.|
T Consensus 93 ~~~d~~~g----------------~~~~~~~~~~~~~~~~~~~i~~-d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 93 ERQREPGG----------------EWESIADSFEGKKLNSPNDVCL-APDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp EEECSTTC----------------CEEEEECEETTEECCCCCCEEE-CTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred EEEcCCCC----------------cEEEEeeccCCCCCCCCCCEEE-CCCCCEEEECCccccccccccccccccCCCcEE
Confidence 99998765 22222111111 112677887 999998887 43 13567
Q ss_pred EEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCC-CCCC----CCCCCCcccceeeccccCCCceE
Q 023246 146 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPM-PTDF----PPLPDNAEKIMKANKQGREDHSR 220 (285)
Q Consensus 146 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
..++.. ++. ..+..+...+..++|+|+++.+++.+.++.|.+|++. .+.+ ..+......+..+ ....++.++
T Consensus 156 ~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i-~~d~~G~l~ 232 (296)
T 3e5z_A 156 FRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL-RVDAGGLIW 232 (296)
T ss_dssp EEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE-EEBTTSCEE
T ss_pred EEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE-EECCCCCEE
Confidence 777765 443 3445556678899999999988777778999999986 3332 1111111111111 122344455
Q ss_pred EEeCCCCeEEEEEecccccceeE
Q 023246 221 ITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
++. ++.|.+|+.. ++.+..+
T Consensus 233 v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEE--TTEEEEECTT-SCEEEEE
T ss_pred EEc--CCeEEEECCC-CCEEEEE
Confidence 554 8889999975 4444333
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=6.9e-14 Score=114.79 Aligned_cols=197 Identities=9% Similarity=0.016 Sum_probs=121.6
Q ss_pred eeEEEEcCCCCcEEEEee-CC--CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ecC
Q 023246 6 LNAIVIDPRNPNYFAVGG-SD--EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND 81 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~-~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~d 81 (285)
+..++|+|++ .+|+... .+ ..|.+||+.+++.. .+..++......+.|+|+|+.|+. +.+
T Consensus 38 ~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~---------------~l~~~~~~~~~~~~~spdg~~l~~~~~~ 101 (396)
T 3c5m_A 38 FYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAV---------------QLTEGKGDNTFGGFISTDERAFFYVKNE 101 (396)
T ss_dssp TTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEE---------------ECCCSSCBCTTTCEECTTSSEEEEEETT
T ss_pred eecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEE---------------EeecCCCCccccceECCCCCEEEEEEcC
Confidence 6678999987 5655553 33 36788888876521 111222222234789999998877 457
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeee-------------------EEEecCCCcEEEEe---
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKG-------------------VNFFGPNDEYVMSG--- 139 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~l~~~--- 139 (285)
+.|++|++.++ +....+..+... ... +. ++|+++.++..
T Consensus 102 ~~l~~~d~~~~----------------~~~~~~~~~~~~--~~~g~~l~~~~~~~~~~~~~~~~~-~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 102 LNLMKVDLETL----------------EEQVIYTVDEEW--KGYGTWVANSDCTKLVGIEILKRD-WQPLTSWEKFAEFY 162 (396)
T ss_dssp TEEEEEETTTC----------------CEEEEEECCTTE--EEEEEEEECTTSSEEEEEEEEGGG-CCCCCSHHHHHHHH
T ss_pred CcEEEEECCCC----------------CcEEEEeccccc--CCCCCEEEeccCCccccccccccc-cCCCCcceeeeeec
Confidence 78999999876 233333322211 111 23 37777766554
Q ss_pred --cCCCeEEEEecCCCceEEEEecccccceEeEEcC-CCCeEEEEecC------CcEEEEcCCCCCCCCCCCCc-c-cce
Q 023246 140 --SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHP-HIPMFATCGIE------KTVKLWAPMPTDFPPLPDNA-E-KIM 208 (285)
Q Consensus 140 --~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~t~~~d------~~i~iwd~~~~~~~~~~~~~-~-~~~ 208 (285)
..+..|++||+.+++..... .+...+..+.|+| ++..|+..+.+ ..|.+|++.++....+..+. . .+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT 241 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred cCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence 45778999999988765544 4567789999999 78877666543 36888998776654443322 1 233
Q ss_pred eeccccCCCceEEEeCCC-----CeEEEEEeccccc
Q 023246 209 KANKQGREDHSRITLTPD-----VIMHVLRLQRRQT 239 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~~~ 239 (285)
... +.++++.++..+.+ +.|++||+.+++.
T Consensus 242 ~~~-~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 242 HEF-WIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EEE-ECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred ceE-ECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 333 34555555544332 4599999876643
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=6.1e-13 Score=117.67 Aligned_cols=198 Identities=10% Similarity=0.086 Sum_probs=126.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCCC-----cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDE-----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
.+.+++||||+ .+||.+..++ .|++||+.+++.. ..... ...+..++|+|||+.|+.+
T Consensus 126 ~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~--------------~~~~~--~~~~~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 126 ALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKEL--------------PDVLE--RVKFSCMAWTHDGKGMFYN 188 (710)
T ss_dssp EEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEE--------------EEEEE--EECSCCEEECTTSSEEEEE
T ss_pred EEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------ccccc--CcccceEEEEeCCCEEEEE
Confidence 47789999987 6777665433 8999999988632 11101 1125679999999977764
Q ss_pred -cCCc----------------EEEEEcCCCCCCCCCCCCCccccCCCC--ceEeecccCceeeeeEEEecCCCcEEEEec
Q 023246 80 -NDEL----------------VYLFEKNMGLGPSPLSLSPEDLQKREE--PQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 140 (285)
Q Consensus 80 -~d~~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 140 (285)
.++. |++|++.++ .. ...+........+..+.| +|++++|+..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~----------------~~~~~~v~~~~~~~~~~~~~~~-SpDg~~l~~~~ 251 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGTD----------------QSEDILCAEFPDEPKWMGGAEL-SDDGRYVLLSI 251 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTSC----------------GGGCEEEECCTTCTTCEEEEEE-CTTSCEEEEEE
T ss_pred EECCccccccccccccCCCCEEEEEECCCC----------------cccceEEeccCCCCeEEEEEEE-cCCCCEEEEEE
Confidence 4544 999999765 21 122333222223677886 99999988765
Q ss_pred C-----CCeEEEEecCC------Cc-eEEEEecccccceEeEEcCCCCeEEEEecC----CcEEEEcCCCCC---CCCCC
Q 023246 141 D-----CGHLFIWKKKG------GK-LVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPTD---FPPLP 201 (285)
Q Consensus 141 ~-----dg~v~vwd~~~------~~-~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~~---~~~~~ 201 (285)
. +..|++||+.+ ++ ....+..+...+.. .|+|++..|+..+.+ +.|.+|++.++. ...+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 4 67899999986 43 35566666666654 588999887666543 369999987653 23333
Q ss_pred CCcc--cceeeccccCCCceEEEeCCCCe--EEEEEecccc
Q 023246 202 DNAE--KIMKANKQGREDHSRITLTPDVI--MHVLRLQRRQ 238 (285)
Q Consensus 202 ~~~~--~~~~~~~~~~~~~~~~~~s~d~~--i~vwd~~~~~ 238 (285)
.+.. .+....+ ...+.++++...++. |++|++.+++
T Consensus 331 ~~~~~~~~~~~~~-~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 331 PEHEKDVLEWVAC-VRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp CCCSSCEEEEEEE-ETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCCCeEEEEEE-EcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 3333 2222322 335567788888875 5556654444
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=5.2e-13 Score=107.19 Aligned_cols=197 Identities=12% Similarity=0.132 Sum_probs=130.2
Q ss_pred CCccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-
Q 023246 1 MNSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY- 79 (285)
Q Consensus 1 ~~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~- 79 (285)
|....|++++|+|+. ..++..+.++.++.|. ++ ....+ ..+...+.+++|++++++++++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~--------------~~~~~-~~~~~~~~~~~~~~~g~l~~~~~ 63 (333)
T 2dg1_A 3 MSQQDLPTLFYSGKS-NSAVPIISESELQTIT---AE--------------PWLEI-SKKGLQLEGLNFDRQGQLFLLDV 63 (333)
T ss_dssp ---CCCCBCCSCGGG-GCSSCCCCGGGSCEEE---CE--------------EEEEE-ESSCCCEEEEEECTTSCEEEEET
T ss_pred ccccccceeeecCCc-cceeEEeecccCcccc---cc--------------eeEEE-eccCccccCcEECCCCCEEEEEC
Confidence 556789999999964 6666667888999993 22 11111 3445567899999999987776
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC----CeEEEEecCCCce
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----GHLFIWKKKGGKL 155 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~vwd~~~~~~ 155 (285)
.++.|.+||..++ +.......+... +.++++ +++++++++...+ +.|.+||..+++.
T Consensus 64 ~~~~i~~~d~~~~----------------~~~~~~~~~~~~--~~~i~~-~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 64 FEGNIFKINPETK----------------EIKRPFVSHKAN--PAAIKI-HKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp TTCEEEEECTTTC----------------CEEEEEECSSSS--EEEEEE-CTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred CCCEEEEEeCCCC----------------cEEEEeeCCCCC--cceEEE-CCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 4889999998766 333323233333 899997 9999988887766 7899999987776
Q ss_pred EEEEe--cccccceEeEEcCCCCeEEEEec------CCcEEEEcCCCCCCCCCCCCcccceeeccccCCCc-eEEEeCCC
Q 023246 156 VRLMV--GDRHVVNQLEPHPHIPMFATCGI------EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDH-SRITLTPD 226 (285)
Q Consensus 156 ~~~~~--~h~~~v~~~~~~p~~~~l~t~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~d 226 (285)
...+. .+...+..++++|+++++++... .+.|..++..++++..+.........+.+ .++++ ++++.+.+
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~dg~~l~v~~~~~ 203 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIAL-STDEKVLWVTETTA 203 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE-CTTSSEEEEEEGGG
T ss_pred EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEE-CCCCCEEEEEeCCC
Confidence 54443 23457899999999988776653 35566677665544332211112222222 33444 55666778
Q ss_pred CeEEEEEecc
Q 023246 227 VIMHVLRLQR 236 (285)
Q Consensus 227 ~~i~vwd~~~ 236 (285)
+.|++|++..
T Consensus 204 ~~i~~~d~~~ 213 (333)
T 2dg1_A 204 NRLHRIALED 213 (333)
T ss_dssp TEEEEEEECT
T ss_pred CeEEEEEecC
Confidence 8999999864
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.52 E-value=1.1e-12 Score=105.72 Aligned_cols=181 Identities=12% Similarity=0.145 Sum_probs=114.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCC---Cc--EEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFAVGGSD---EY--ARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~d---g~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
.+..++|+|++ ..||..+.+ +. |.+|++.+++.. .+ ..+.. +..++|+|+|+.|+..
T Consensus 60 ~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~---------------~l-~~~~~-~~~~~wspdg~~l~~~ 121 (347)
T 2gop_A 60 NATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSK---------------KI-LEAKN-IRSLEWNEDSRKLLIV 121 (347)
T ss_dssp SCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEE---------------EE-EEESE-EEEEEECTTSSEEEEE
T ss_pred cCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceE---------------EE-EcCCC-ccceeECCCCCEEEEE
Confidence 46779999986 677766543 33 777787766421 11 11223 8899999999977764
Q ss_pred c-C---------------------------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC
Q 023246 80 N-D---------------------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 131 (285)
Q Consensus 80 ~-d---------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (285)
. + ..|++||+.++ +.+..+.. . . +..+.| +|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~----------------~~~~~l~~-~-~--~~~~~~-sp 180 (347)
T 2gop_A 122 GFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE----------------EVIEEFEK-P-R--FSSGIW-HR 180 (347)
T ss_dssp EECCCC---------CCCC---------CEEEEEEEETTTT----------------EEEEEEEE-E-T--TCEEEE-ET
T ss_pred EccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC----------------eEEeeecC-C-C--cccccC-CC
Confidence 3 2 56889998776 33244443 2 3 778886 99
Q ss_pred CCcEEEEecCC---------CeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecC--------CcEEEEcCCC
Q 023246 132 NDEYVMSGSDC---------GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE--------KTVKLWAPMP 194 (285)
Q Consensus 132 ~~~~l~~~~~d---------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d--------~~i~iwd~~~ 194 (285)
++ +++++..+ ..|+++| +++ ...+..+ ..+..+ +|+|++|+.++.+ ..|.+|| +
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred Ce-EEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C
Confidence 99 77776543 2455555 454 3444444 445444 9999998877744 3688888 4
Q ss_pred CCCCCC-CCCccccee-eccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 195 TDFPPL-PDNAEKIMK-ANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 195 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+....+ ..+...+.. ..+ . ++ ++++++.++.+++| +.++
T Consensus 252 ~~~~~l~~~~~~~~~~~~~~-s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 252 KEVMGILDEVDRGVGQAKIK-D-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp SCEEESSTTCCSEEEEEEEE-T-TE-EEEEEEETTEEEEE-EESS
T ss_pred CceEeccccCCcccCCccEE-c-Cc-EEEEEecCCcEEEE-EcCC
Confidence 443333 233334433 333 3 44 78888999999999 8743
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=2.3e-13 Score=111.63 Aligned_cols=192 Identities=8% Similarity=-0.022 Sum_probs=119.8
Q ss_pred EEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEE-------------------EE
Q 023246 8 AIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITG-------------------LA 68 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------i~ 68 (285)
.+.|+|++ ..|+.++.++.|.+||+.+++..... ..+...... +.
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~---------------~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 148 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIY---------------TVDEEWKGYGTWVANSDCTKLVGIEILKRD 148 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEE---------------ECCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEE---------------ecccccCCCCCEEEeccCCccccccccccc
Confidence 37899986 88888888889999999877532111 111111111 35
Q ss_pred EecCCCEEEE------ecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecC
Q 023246 69 YSNTSELLIS------YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSD 141 (285)
Q Consensus 69 ~s~~~~~l~s------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~ 141 (285)
|+|+++.++. ..+..|++||+.++ +. ..+..+... +..+.| +| +++.++..+.
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g----------------~~-~~~~~~~~~--~~~~~~-sp~dg~~l~~~~~ 208 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETG----------------EL-EVIHQDTAW--LGHPIY-RPFDDSTVGFCHE 208 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTC----------------CE-EEEEEESSC--EEEEEE-ETTEEEEEEEEEC
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCC----------------cE-EeeccCCcc--cccceE-CCCCCCEEEEEec
Confidence 6777775554 23668999999876 33 333334433 788886 88 7876666544
Q ss_pred C------CeEEEEecCCCceEEEEecc--cccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCCCCCCCCcccce
Q 023246 142 C------GHLFIWKKKGGKLVRLMVGD--RHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPPLPDNAEKIM 208 (285)
Q Consensus 142 d------g~v~vwd~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~ 208 (285)
+ ..|.+||+..++... +..+ ...+..++|+|++++|+.++.+ +.|++||+.++....+..... .
T Consensus 209 ~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~- 285 (396)
T 3c5m_A 209 GPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-C- 285 (396)
T ss_dssp SCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-E-
T ss_pred CCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-C-
Confidence 3 468899987655433 3323 2357889999999987777644 449999998776433211111 1
Q ss_pred eeccccC-CCceEEEeC----------------CCCeEEEEEeccccc
Q 023246 209 KANKQGR-EDHSRITLT----------------PDVIMHVLRLQRRQT 239 (285)
Q Consensus 209 ~~~~~~~-~~~~~~~~s----------------~d~~i~vwd~~~~~~ 239 (285)
...+ .+ ++++++..+ .+..|++||+.+++.
T Consensus 286 ~~~~-s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 286 SHLM-SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp EEEE-ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCCc-cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 1223 33 555555433 347899999877654
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=5e-12 Score=99.78 Aligned_cols=198 Identities=12% Similarity=0.090 Sum_probs=125.0
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe---
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--- 79 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~--- 79 (285)
...+.+++++|++ .++++...++.|.+||..+++..... ..........+..++++|+|+++++.
T Consensus 68 ~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~-----------~~~~~~~~~~~~~i~~d~~G~l~vtd~~~ 135 (296)
T 3e5z_A 68 SHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIA-----------DSFEGKKLNSPNDVCLAPDGSLWFSDPTY 135 (296)
T ss_dssp CSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEE-----------CEETTEECCCCCCEEECTTSCEEEEECSH
T ss_pred CCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEe-----------eccCCCCCCCCCCEEECCCCCEEEECCcc
Confidence 3457899999976 78777777789999999777632110 00001112346789999999988862
Q ss_pred -c--------------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCe
Q 023246 80 -N--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGH 144 (285)
Q Consensus 80 -~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 144 (285)
. .+.|..++.. + ....+..+... ...++| +|+++.+++.+.++.
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~~~-g-----------------~~~~~~~~~~~--~~gi~~-s~dg~~lv~~~~~~~ 194 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLAPD-G-----------------TLSAPIRDRVK--PNGLAF-LPSGNLLVSDTGDNA 194 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEECTT-S-----------------CEEEEECCCSS--EEEEEE-CTTSCEEEEETTTTE
T ss_pred ccccccccccccccCCCcEEEEECCC-C-----------------CEEEeecCCCC--CccEEE-CCCCCEEEEeCCCCe
Confidence 1 2345555543 2 23334444333 678997 999998888888999
Q ss_pred EEEEecC-CCce---EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceE
Q 023246 145 LFIWKKK-GGKL---VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSR 220 (285)
Q Consensus 145 v~vwd~~-~~~~---~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
|++|++. +++. ...+..+...+..++++++|+++++. ++.|.+|++.+..+..+..+.. +........+.+.+
T Consensus 195 i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 195 THRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTL 271 (296)
T ss_dssp EEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEE
T ss_pred EEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEE
Confidence 9999986 5554 23333345667889999999876666 7899999997554444433333 33333323444455
Q ss_pred EEeCCCCeEEEEEeccc
Q 023246 221 ITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~ 237 (285)
+.++.+ .+.-++..+.
T Consensus 272 ~v~t~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 272 YMTVST-EFWSIETNVR 287 (296)
T ss_dssp EEEETT-EEEEEECSCC
T ss_pred EEEcCC-eEEEEEcccc
Confidence 555554 3444444443
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.49 E-value=3.6e-12 Score=112.44 Aligned_cols=196 Identities=9% Similarity=0.064 Sum_probs=122.6
Q ss_pred ceeEEEEcCCCCcEEE-----EeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFA-----VGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~-----tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
.+.+++||||+ .+|| .|+.+.+|++||+.+++... ...+ ... ....++|+|+|+.|+.+
T Consensus 122 ~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~------------~~~~-~~~--~~~~~~wspDg~~l~~~ 185 (695)
T 2bkl_A 122 SLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK------------VDVI-EGG--KYATPKWTPDSKGFYYE 185 (695)
T ss_dssp EEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS------------SCCB-SCC--TTCCCEECTTSSEEEEE
T ss_pred EEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC------------Cccc-Ccc--cccceEEecCCCEEEEE
Confidence 57889999987 6766 34445689999999887320 0011 111 12578999999977774
Q ss_pred -cCCc-------------EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCC--
Q 023246 80 -NDEL-------------VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG-- 143 (285)
Q Consensus 80 -~d~~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-- 143 (285)
.+.. |++|++.++. .+....+........+..+.| +|+|++++..+.++
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~--------------~~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEP--------------SKDTVVHERTGDPTTFLQSDL-SRDGKYLFVYILRGWS 250 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCG--------------GGCEEEECCCCCTTCEEEEEE-CTTSCCEEEEEEETTT
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCc--------------hhceEEEecCCCCEEEEEEEE-CCCCCEEEEEEeCCCC
Confidence 4554 9999998761 001122332222123778886 99999998877665
Q ss_pred --eEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe---cCCcEEEEcCCCCCC---CCCCCCc-c-cceeeccc
Q 023246 144 --HLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG---IEKTVKLWAPMPTDF---PPLPDNA-E-KIMKANKQ 213 (285)
Q Consensus 144 --~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~---~d~~i~iwd~~~~~~---~~~~~~~-~-~~~~~~~~ 213 (285)
.|++|+..+++. ..+..+...+....+ |++.+++... .++.|.+|++.++.. ..+..+. . .+....+
T Consensus 251 ~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~- 327 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI- 327 (695)
T ss_dssp EEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE-
T ss_pred ceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE-
Confidence 788887765544 344555566666667 5566444433 257899999976542 3332222 2 2222222
Q ss_pred cCCCceEEEeCCCCeEEEEEec
Q 023246 214 GREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 214 ~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
..+.++++...|+..++|.+.
T Consensus 328 -~~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 328 -VGGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp -ETTEEEEEEEETTEEEEEEEE
T ss_pred -ECCEEEEEEEECCEEEEEEEe
Confidence 255678888889988888766
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=2e-11 Score=97.86 Aligned_cols=205 Identities=4% Similarity=-0.091 Sum_probs=135.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe--cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY--NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~--~d~ 82 (285)
....+++++++ .++++...++.|.+||..+++....+.... ..+.......+++ .+++++++. .++
T Consensus 85 ~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~----------~~~~~~~p~~i~~-~~~~lyv~~~~~~~ 152 (328)
T 3dsm_A 85 SPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPD----------MDMESGSTEQMVQ-YGKYVYVNCWSYQN 152 (328)
T ss_dssp SEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTT----------CCTTTCBCCCEEE-ETTEEEEEECTTCC
T ss_pred CCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCC----------ccccCCCcceEEE-ECCEEEEEcCCCCC
Confidence 45678998875 555555589999999999887432211110 0011123446666 455566664 388
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC----------CeEEEEecCC
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC----------GHLFIWKKKG 152 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------g~v~vwd~~~ 152 (285)
.|.++|..++ +....+..... ...+.+ ++++++++++..+ +.|.++|..+
T Consensus 153 ~v~viD~~t~----------------~~~~~i~~g~~---p~~i~~-~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t 212 (328)
T 3dsm_A 153 RILKIDTETD----------------KVVDELTIGIQ---PTSLVM-DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET 212 (328)
T ss_dssp EEEEEETTTT----------------EEEEEEECSSC---BCCCEE-CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT
T ss_pred EEEEEECCCC----------------eEEEEEEcCCC---ccceEE-cCCCCEEEEECCCccCCccccCCceEEEEECCC
Confidence 9999999877 45555554332 567886 8999988877655 7999999999
Q ss_pred CceEEEEecc-cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCC---CCCCcccceeeccccCCCceEEEe----C
Q 023246 153 GKLVRLMVGD-RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP---LPDNAEKIMKANKQGREDHSRITL----T 224 (285)
Q Consensus 153 ~~~~~~~~~h-~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----s 224 (285)
++....+... ...+..++++|+++.+..+.. .|.+||+.++++.. +.........+........++++. .
T Consensus 213 ~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 213 FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 9887776532 246899999999998877654 89999998776532 111112232332222345577776 6
Q ss_pred CCCeEEEEEecccccceeEe
Q 023246 225 PDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 225 ~d~~i~vwd~~~~~~~~~~~ 244 (285)
.++.|.+||.. ++.+..+.
T Consensus 291 ~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 291 QQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp SEEEEEEECTT-CCEEEEEE
T ss_pred cCCEEEEECCC-CCEEEEEE
Confidence 78999999987 66665553
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.42 E-value=7.5e-12 Score=110.45 Aligned_cols=161 Identities=10% Similarity=0.020 Sum_probs=107.5
Q ss_pred CCCCCcceEEEEEecCCCEEEE-----ec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEec
Q 023246 57 IGKNNIHITGLAYSNTSELLIS-----YN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 130 (285)
Q Consensus 57 ~~~h~~~v~~i~~s~~~~~l~s-----~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 130 (285)
..+|...+..++|||||++|+. |+ +.+|++||+.++ +.+. ..+........++| +
T Consensus 116 a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg----------------~~~~--~~~~~~~~~~~~~w-s 176 (695)
T 2bkl_A 116 SKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG----------------EWSK--VDVIEGGKYATPKW-T 176 (695)
T ss_dssp SSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC----------------CBCS--SCCBSCCTTCCCEE-C
T ss_pred ccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC----------------CCcC--CcccCcccccceEE-e
Confidence 3567778999999999998873 22 468999999887 2220 01111100256775 9
Q ss_pred CCCcEEEEecCCCe-------------EEEEecCCCc----eEEEEecccccceEeEEcCCCCeEEEEecCC----cEEE
Q 023246 131 PNDEYVMSGSDCGH-------------LFIWKKKGGK----LVRLMVGDRHVVNQLEPHPHIPMFATCGIEK----TVKL 189 (285)
Q Consensus 131 ~~~~~l~~~~~dg~-------------v~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~----~i~i 189 (285)
|+++.|+.++.+.. |++|++.+++ ++.....|...+..+.|+|+|++|+..+.++ .|.+
T Consensus 177 pDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~ 256 (695)
T 2bkl_A 177 PDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYW 256 (695)
T ss_dssp TTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEE
T ss_pred cCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEE
Confidence 99999998887765 9999998876 3333334556788999999999988877666 6777
Q ss_pred EcCCCCCCCCCCCCcccceeeccccCCCceEEEeC---CCCeEEEEEecccc
Q 023246 190 WAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLT---PDVIMHVLRLQRRQ 238 (285)
Q Consensus 190 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~d~~i~vwd~~~~~ 238 (285)
|+..++....+..+........+ +++.+++... .++.|.+||+.++.
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~--~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 257 KRPGEKDFRLLVKGVGAKYEVHA--WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp ECTTCSSCEEEEECSSCCEEEEE--ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EcCCCCceEEeecCCCceEEEEe--cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 87655555444434433333333 3333444443 35899999987654
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.41 E-value=3.4e-11 Score=96.51 Aligned_cols=220 Identities=7% Similarity=-0.026 Sum_probs=139.0
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i 84 (285)
...+.+.. ..++++...++.|.+||..+++.+. .+ . .......++++++++++++. .++.|
T Consensus 46 ~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~--------------~i-~-~~~~p~~i~~~~~g~lyv~~~~~~~v 107 (328)
T 3dsm_A 46 AQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVG--------------RI-T-GFTSPRYIHFLSDEKAYVTQIWDYRI 107 (328)
T ss_dssp EEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEE--------------EE-E-CCSSEEEEEEEETTEEEEEEBSCSEE
T ss_pred ceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEE--------------Ec-C-CCCCCcEEEEeCCCeEEEEECCCCeE
Confidence 45677754 3677777778999999999887322 11 1 23467899999999766665 58999
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccC---ceeeeeEEEecCCCcEEEEec-CCCeEEEEecCCCceEEEEe
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGPNDEYVMSGS-DCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~ 160 (285)
.+||..+. +....+..... ......+++ .+++.+++.. .++.|.++|+.+++.+..+.
T Consensus 108 ~~iD~~t~----------------~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 108 FIINPKTY----------------EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp EEEETTTT----------------EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred EEEECCCC----------------eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 99999876 44445543320 002556775 3455555544 48999999999999888776
Q ss_pred cccccceEeEEcCCCCeEEEEecC----------CcEEEEcCCCCCCC-CCCCC-cccceeeccccCCCceEEEeCCCCe
Q 023246 161 GDRHVVNQLEPHPHIPMFATCGIE----------KTVKLWAPMPTDFP-PLPDN-AEKIMKANKQGREDHSRITLTPDVI 228 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~~d----------~~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~s~d~~ 228 (285)
.. .....++++|++++++++..+ +.|.++|+.+.++. .+... ......+.. .++++.++.... .
T Consensus 170 ~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~-~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 170 IG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL-NGTRDTLYWINN--D 245 (328)
T ss_dssp CS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE-CTTSCEEEEESS--S
T ss_pred cC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE-ecCCCEEEEEcc--E
Confidence 43 456789999999987777654 78999999877642 22111 112222322 333444444443 8
Q ss_pred EEEEEeccccccee--Eee-eccccccCCCCCcCeEEEee
Q 023246 229 MHVLRLQRRQTLAY--RER-RYNAADFESDEEEGETYLLG 265 (285)
Q Consensus 229 i~vwd~~~~~~~~~--~~~-~~~~~~~~~~~~~~~v~~~~ 265 (285)
|.+||..+.+.... +.. ......++.+++++.+|+.+
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 99999877654321 111 11122344444566788776
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.41 E-value=6.2e-12 Score=102.18 Aligned_cols=206 Identities=9% Similarity=0.027 Sum_probs=115.7
Q ss_pred EEEEcCCCCcEEEEee----------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 8 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
.++|+|++ .+++++. .+++|.+||+.+.+....+.... .. ..+......++|+|+|++|+
T Consensus 54 ~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~-------~~--~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 54 HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP-------KR--VQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT-------TB--CCBCCCGGGEEECTTSSEEE
T ss_pred ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc-------cc--cccCCCcceEEECCCCCEEE
Confidence 78999986 6777665 36789999998776432211000 00 11234566799999999887
Q ss_pred Ee--c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceE-eecccC------------------ceeeeeEEE-------
Q 023246 78 SY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGHRN------------------SQTVKGVNF------- 128 (285)
Q Consensus 78 s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~i~~~~~------- 128 (285)
++ . ++.|.+||+.+. +.+.. +..... ...+..+.+
T Consensus 124 v~n~~~~~~v~v~d~~~~----------------~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKG----------------DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp EEEESSSEEEEEEETTTT----------------EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred EECCCCCCeEEEEECCCC----------------cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 75 3 689999999876 22222 111000 000111110
Q ss_pred --------ec-----------CCCcEEEEecCCCeEEEEecCCCce--EEEEecc----------cccceEeEEcCCCCe
Q 023246 129 --------FG-----------PNDEYVMSGSDCGHLFIWKKKGGKL--VRLMVGD----------RHVVNQLEPHPHIPM 177 (285)
Q Consensus 129 --------~~-----------~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~h----------~~~v~~~~~~p~~~~ 177 (285)
++ +++..++..+.++.|+++|+..... +..+... ......++++|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 01 1122333344456677777654332 1111100 011223789999888
Q ss_pred EEEEec-----------CCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc--ccceeE
Q 023246 178 FATCGI-----------EKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR--QTLAYR 243 (285)
Q Consensus 178 l~t~~~-----------d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~--~~~~~~ 243 (285)
+..+.. .+.|.+||+.+.+. .++..+. ...+.. .++++++++.+. +.|.+||..+. +.+..+
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~-spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTI-DQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEE-ETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEE-CCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 665543 34899999988764 4444333 333333 445567776666 99999999988 665443
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.39 E-value=4.7e-10 Score=88.22 Aligned_cols=193 Identities=11% Similarity=0.117 Sum_probs=129.5
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~ 82 (285)
..+.++++++++ .++++...++.|.+||.. ++.. .... ..+...+.+++++++|.++++.. ++
T Consensus 15 ~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~-------------~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~ 78 (299)
T 2z2n_A 15 TGPYGITVSDKG-KVWITQHKANMISCINLD-GKIT-------------EYPL-PTPDAKVMCLTISSDGEVWFTENAAN 78 (299)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEE-------------EEEC-SSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred CCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeE-------------EecC-CcccCceeeEEECCCCCEEEeCCCCC
Confidence 468899999975 777766668899999987 5421 0011 22345789999999999888765 78
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE-Eec
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MVG 161 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~~ 161 (285)
.|..|+.. + ....+........+.++++ +++++++++...++.|.+||. +++.... ...
T Consensus 79 ~i~~~~~~-g-----------------~~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 79 KIGRITKK-G-----------------IIKEYTLPNPDSAPYGITE-GPNGDIWFTEMNGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp EEEEECTT-S-----------------CEEEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eEEEECCC-C-----------------cEEEEeCCCcCCCceeeEE-CCCCCEEEEecCCceEEEECC-CCCEEEecCCC
Confidence 89999875 2 1222321111123788987 889988888878899999998 5654432 223
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCC--CCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
+...+..++++|+++.+++...++.|..|++ .+++.. .......+..+.. ..++.++++...++.|.+|+.
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITK-GNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEE-CCCCCEEEEccCCceEEEECC
Confidence 4467899999999988777777789999998 554322 1212222222222 234456666666788999987
No 191
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=2.1e-10 Score=94.60 Aligned_cols=196 Identities=11% Similarity=0.030 Sum_probs=121.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CC-
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DE- 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~- 82 (285)
....++|+|++ +++++...++.|++||..+++... +... ..... ++|+++++.|+.+. ++
T Consensus 132 ~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~---------------~~~~-~~~~~-ia~~~~g~~l~~~d~~~~ 193 (409)
T 3hrp_A 132 YMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTT---------------VHPG-FKGGK-PAVTKDKQRVYSIGWEGT 193 (409)
T ss_dssp CEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEE---------------EEET-CCBCB-CEECTTSSEEEEEBSSTT
T ss_pred CceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEE---------------eecc-CCCCc-eeEecCCCcEEEEecCCC
Confidence 45689999975 788887788999999998775321 1011 11223 89999999776653 34
Q ss_pred -cEEEEEcCCCCCCCCCCCCCccccCCCCceEe---ec-ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 83 -LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY---SG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 83 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
.|.+|+.... .....+ .. .. ..+.++++ +|++..|+.+..++.|+.||..++....
T Consensus 194 ~~I~~~d~~~~----------------~~~~~~g~~~~~~~--~~p~~iav-~p~~g~lyv~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 194 HTVYVYMKASG----------------WAPTRIGQLGSTFS--GKIGAVAL-DETEEWLYFVDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEEEEEEGGGT----------------TCEEEEEECCTTSC--SCCCBCEE-CTTSSEEEEECTTCEEEEEETTTCCEEE
T ss_pred ceEEEEEcCCC----------------ceeEEeeeccchhc--CCcEEEEE-eCCCCeEEEEECCCcEEEEECCCCCEEE
Confidence 7999988755 222232 11 22 23778887 8844445556778999999998776432
Q ss_pred E----Eecccccc-e-EeEEcCC-CCeEEEEecCCcEEEEcCCCCCCCCCCCCc---------------ccceeeccccC
Q 023246 158 L----MVGDRHVV-N-QLEPHPH-IPMFATCGIEKTVKLWAPMPTDFPPLPDNA---------------EKIMKANKQGR 215 (285)
Q Consensus 158 ~----~~~h~~~v-~-~~~~~p~-~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~ 215 (285)
. ..++...- . .++|+|+ +.++++-...+.|+.|+..... ..+.++. .....+. ..+
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia-~d~ 332 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMT-VDE 332 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEE-ECT
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEE-EeC
Confidence 2 22222222 3 8999995 5556666678899999986531 1111110 0111111 123
Q ss_pred CCceEEEeC-CCCeEEEEEeccccc
Q 023246 216 EDHSRITLT-PDVIMHVLRLQRRQT 239 (285)
Q Consensus 216 ~~~~~~~~s-~d~~i~vwd~~~~~~ 239 (285)
++.++++-+ .+..|+.|++..+..
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEE
Confidence 455777777 788999998766543
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.36 E-value=5.4e-11 Score=105.73 Aligned_cols=195 Identities=12% Similarity=0.107 Sum_probs=120.4
Q ss_pred ceeEEEEcCCCCcEEEEeeCC-C----cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFAVGGSD-E----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~d-g----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
.+.+++||||+ .+||.+..+ | +|++||+.+++.. ... .+...+..++|+|+ +.|+.+
T Consensus 164 ~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~--------------~~~--~~~~~~~~~~wspD-~~l~~~ 225 (741)
T 1yr2_A 164 ALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPL--------------ADE--LKWVKFSGLAWLGN-DALLYS 225 (741)
T ss_dssp EEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEE--------------EEE--EEEEESCCCEESTT-SEEEEE
T ss_pred EEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCC--------------Ccc--CCCceeccEEEECC-CEEEEE
Confidence 57789999987 666665543 3 5999999988731 100 01112357899999 866664
Q ss_pred -cCC--------------cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC--
Q 023246 80 -NDE--------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC-- 142 (285)
Q Consensus 80 -~d~--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-- 142 (285)
.++ .|++|++.++. ......+........+..+.| +|+|++|+..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--------------~~~~lv~~~~~~~~~~~~~~~-SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLGTPQ--------------SADQPVFATPELPKRGHGASV-SSDGRWVVITSSEGT 290 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETTSCG--------------GGCEEEECCTTCTTCEEEEEE-CTTSCEEEEEEECTT
T ss_pred EecCcccccccccCCCCCEEEEEECCCCc--------------hhCEEEeccCCCCeEEEEEEE-CCCCCEEEEEEEccC
Confidence 333 38899987651 001223333222123678886 9999988877654
Q ss_pred ---CeEEEEecCCC--ceEEEEecccccceEeEEcCCCCeEEEEecC----CcEEEEcCCCC--CCCCCCCCcccce-ee
Q 023246 143 ---GHLFIWKKKGG--KLVRLMVGDRHVVNQLEPHPHIPMFATCGIE----KTVKLWAPMPT--DFPPLPDNAEKIM-KA 210 (285)
Q Consensus 143 ---g~v~vwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d----~~i~iwd~~~~--~~~~~~~~~~~~~-~~ 210 (285)
..|++||+.++ +....+..+...+.... +|++..|+..+.+ +.|.+|++.+. ....+..+....+ ..
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~ 369 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV 369 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE
Confidence 38999999877 41445555555555553 4889988777653 45999998763 2222222222222 22
Q ss_pred ccccCCCceEEEeCCCCeEEEEEec
Q 023246 211 NKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 211 ~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
.+ ..+.++++...++..++|.+.
T Consensus 370 ~~--~~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 370 GI--AGNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE--EBTEEEEEEEETTEEEEEEEE
T ss_pred EE--ECCEEEEEEEECCEEEEEEEe
Confidence 22 245677888889888887665
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.35 E-value=1.6e-10 Score=102.31 Aligned_cols=203 Identities=6% Similarity=-0.028 Sum_probs=128.0
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCc----------------EEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEY----------------ARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLA 68 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~----------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~ 68 (285)
.+.+++|+||+ ..|+.++.++. |++|++.+++.... ... ....|...+..+.
T Consensus 172 ~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~----------~v~-~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 172 KFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI----------LCA-EFPDEPKWMGGAE 239 (710)
T ss_dssp CSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE----------EEE-CCTTCTTCEEEEE
T ss_pred ccceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce----------EEe-ccCCCCeEEEEEE
Confidence 35679999986 77777777765 99999987652100 000 1123455678999
Q ss_pred EecCCCEEEEe-c-----CCcEEEEEcCC------CCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE
Q 023246 69 YSNTSELLISY-N-----DELVYLFEKNM------GLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV 136 (285)
Q Consensus 69 ~s~~~~~l~s~-~-----d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 136 (285)
|+|+|++|+.. . +..|++||+.+ +. .....+..+... +.. .| +++++.|
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~---------------~~~~~l~~~~~~--~~~-~~-s~dg~~l 300 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI---------------LKWVKLIDNFEG--EYD-YV-TNEGTVF 300 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS---------------CCCEEEECSSSS--CEE-EE-EEETTEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc---------------cceEEeeCCCCc--EEE-EE-eccCCEE
Confidence 99999977763 2 46899999975 31 134556655543 333 33 6777776
Q ss_pred EEecC----CCeEEEEecCCCc--eEEEEecccc--cceEeEEcCCCCeEEEEecCCc--EEEEcCCCCC-CCCCCCCcc
Q 023246 137 MSGSD----CGHLFIWKKKGGK--LVRLMVGDRH--VVNQLEPHPHIPMFATCGIEKT--VKLWAPMPTD-FPPLPDNAE 205 (285)
Q Consensus 137 ~~~~~----dg~v~vwd~~~~~--~~~~~~~h~~--~v~~~~~~p~~~~l~t~~~d~~--i~iwd~~~~~-~~~~~~~~~ 205 (285)
+..+. .+.|.+||+.+++ ....+..|.. .+..++|++++.++++...|+. |.+|++..+. +..+..+..
T Consensus 301 ~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~ 380 (710)
T 2xdw_A 301 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG 380 (710)
T ss_dssp EEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS
T ss_pred EEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCc
Confidence 65443 3469999998764 2344444543 6888999987778888888885 5667774544 344443433
Q ss_pred cceeeccccCCCceEEEeC---CCCeEEEEEecccc
Q 023246 206 KIMKANKQGREDHSRITLT---PDVIMHVLRLQRRQ 238 (285)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~s---~d~~i~vwd~~~~~ 238 (285)
.+..+........++++.+ ..+.++.||+.+++
T Consensus 381 ~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 381 SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3333333222233444433 34899999998765
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=2.8e-10 Score=90.34 Aligned_cols=206 Identities=10% Similarity=0.122 Sum_probs=128.5
Q ss_pred ceeEEEEcCCCCcEEEE-------eeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC-CCEE
Q 023246 5 RLNAIVIDPRNPNYFAV-------GGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT-SELL 76 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~t-------g~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~-~~~l 76 (285)
...+++|++++ .++++ +..++.|.+||..+++... +..... .++...+.+++++++ ++++
T Consensus 19 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------~~~~~~-~~~~~~~~~i~~~~~~g~l~ 86 (314)
T 1pjx_A 19 GAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------ICKPEV-NGYGGIPAGCQCDRDANQLF 86 (314)
T ss_dssp TCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE----------EECCEE-TTEECCEEEEEECSSSSEEE
T ss_pred CccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------EEeccc-CCCCCCCceEEEecCCCcEE
Confidence 34689999875 77777 6778999999988775311 000000 124467899999999 8877
Q ss_pred EEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceE-eecc--cCceeeeeEEEecCCCcEEEEecCC-----------
Q 023246 77 ISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGH--RNSQTVKGVNFFGPNDEYVMSGSDC----------- 142 (285)
Q Consensus 77 ~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d----------- 142 (285)
++.....|.+||.. + +.... .... .....+.++++ ++++++.++...+
T Consensus 87 v~~~~~~l~~~d~~-g----------------~~~~~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 87 VADMRLGLLVVQTD-G----------------TFEEIAKKDSEGRRMQGCNDCAF-DYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEETTTEEEEEETT-S----------------CEEECCSBCTTSCBCBCCCEEEE-CTTSCEEEEECBCBCTTSCCCBTT
T ss_pred EEECCCCEEEEeCC-C----------------CEEEEEeccCCCccccCCcCEEE-CCCCCEEEEecCcccccccccccc
Confidence 77665579999987 5 22111 1110 11123788987 8999888877655
Q ss_pred ----CeEEEEecCCCceEEEEecccccceEeEEc----CCCCeEE-EEecCCcEEEEcCC-CCCC------CCCCCCc-c
Q 023246 143 ----GHLFIWKKKGGKLVRLMVGDRHVVNQLEPH----PHIPMFA-TCGIEKTVKLWAPM-PTDF------PPLPDNA-E 205 (285)
Q Consensus 143 ----g~v~vwd~~~~~~~~~~~~h~~~v~~~~~~----p~~~~l~-t~~~d~~i~iwd~~-~~~~------~~~~~~~-~ 205 (285)
+.|..|+.. ++.... ..+......++|+ |+++.+. +...++.|.+|++. .+.+ ..+..+. .
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred cCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 678888876 554433 2334556889999 9997654 44567899999975 3321 1222221 1
Q ss_pred cceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 206 KIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
....+. ...++.++++...++.|.+||..+++....+
T Consensus 227 ~p~~i~-~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 227 GADGMD-FDEDNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEEEEE-EBTTCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred CCCceE-ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEE
Confidence 222221 2334556777667889999998755544433
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.33 E-value=2.4e-09 Score=84.12 Aligned_cols=193 Identities=7% Similarity=0.021 Sum_probs=128.4
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~ 82 (285)
..+.++++++++ .++++...++.|..|+.. ++. ..... ......+..+++.+++.++++. .++
T Consensus 57 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~-------------~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~ 120 (299)
T 2z2n_A 57 AKVMCLTISSDG-EVWFTENAANKIGRITKK-GII-------------KEYTL-PNPDSAPYGITEGPNGDIWFTEMNGN 120 (299)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-------------EEEEC-SSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred CceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE-------------EEEeC-CCcCCCceeeEECCCCCEEEEecCCc
Confidence 457889999975 777777768889999875 321 00011 1234568899999999988876 478
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE-Eec
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MVG 161 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~~ 161 (285)
.|.+||. .+ ....+........+..+++ +++++..++...++.|..||. +++.... +..
T Consensus 121 ~i~~~d~-~g-----------------~~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 180 (299)
T 2z2n_A 121 RIGRITD-DG-----------------KIREYELPNKGSYPSFITL-GSDNALWFTENQNNAIGRITE-SGDITEFKIPT 180 (299)
T ss_dssp EEEEECT-TC-----------------CEEEEECSSTTCCEEEEEE-CTTSCEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eEEEECC-CC-----------------CEEEecCCCCCCCCceEEE-cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCC
Confidence 8999998 33 2222221111123788887 899988888877899999999 6665543 233
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCC--CCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
+...+..++++++++.+++...++.|..|++ .+.+..+ ......+..+.. ..++.++++...++.|..||.
T Consensus 181 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 181 PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA-GAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CSTTCEEEEETTTTEEEEEET
T ss_pred CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE-CCCCCEEEeccCCceEEEECC
Confidence 4456889999999987777666789999999 5443222 212222333322 334456666667889999987
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.33 E-value=9.4e-10 Score=86.82 Aligned_cols=224 Identities=9% Similarity=0.026 Sum_probs=139.3
Q ss_pred eEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEE
Q 023246 7 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYL 86 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~i 86 (285)
.+..|+|+++.++++...++.|..||..+++.. . ......+.+++++++|+++++. +..|.+
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-------------~----~~~~~~~~~i~~~~dG~l~v~~-~~~l~~ 77 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-------------R----VTMDAPVSSVALRQSGGYVATI-GTKFCA 77 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-------------E----EECSSCEEEEEEBTTSSEEEEE-TTEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-------------E----EeCCCceEEEEECCCCCEEEEE-CCeEEE
Confidence 468899976678888888999999999876521 0 1123578999999999966654 668999
Q ss_pred EEcCCCCCCCCCCCCCccccCCCCceEeecc---cCceeeeeEEEecCCCcEEEEecC-----------CCeEEEEecCC
Q 023246 87 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSD-----------CGHLFIWKKKG 152 (285)
Q Consensus 87 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~-----------dg~v~vwd~~~ 152 (285)
||..++ ....+... .....+..+++ +++|+++++... .+.|+.++..
T Consensus 78 ~d~~~g-----------------~~~~~~~~~~~~~~~~~~di~~-d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~- 138 (297)
T 3g4e_A 78 LNWKEQ-----------------SAVVLATVDNDKKNNRFNDGKV-DPAGRYFAGTMAEETAPAVLERHQGALYSLFPD- 138 (297)
T ss_dssp EETTTT-----------------EEEEEEECCTTCSSEEEEEEEE-CTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-
T ss_pred EECCCC-----------------cEEEEEecCCCCCCCCCCCEEE-CCCCCEEEecCCcccccccccCCCcEEEEEECC-
Confidence 998765 22222211 11233788987 999997775422 2455555543
Q ss_pred CceEEEEecccccceEeEEcCCCCeE-EEEecCCcEEEEcC--CCCCCC------CCCCCcccceeeccccCCCceEEEe
Q 023246 153 GKLVRLMVGDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAP--MPTDFP------PLPDNAEKIMKANKQGREDHSRITL 223 (285)
Q Consensus 153 ~~~~~~~~~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
++... +..+....+.++|+|+++.| ++.+.++.|..|++ ..+.+. .+.........+ ....++.+.++.
T Consensus 139 g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~-~~d~~G~lwva~ 216 (297)
T 3g4e_A 139 HHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM-CIDAEGKLWVAC 216 (297)
T ss_dssp SCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE-EEBTTSCEEEEE
T ss_pred CCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee-EECCCCCEEEEE
Confidence 44333 33344567889999999875 45556789999986 343321 111111111111 123345567777
Q ss_pred CCCCeEEEEEecccccceeEeee-ccccccCCC-CCcCeEEEeecCCC
Q 023246 224 TPDVIMHVLRLQRRQTLAYRERR-YNAADFESD-EEEGETYLLGFSDS 269 (285)
Q Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~-~~~~~v~~~~~~~~ 269 (285)
...+.|..||..+++.+..+... .....+..+ ++...+|+.....+
T Consensus 217 ~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp ETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred cCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 77788999998777666655433 233444444 45566888766554
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=4e-10 Score=87.89 Aligned_cols=155 Identities=8% Similarity=0.023 Sum_probs=113.5
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c-CC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N-DE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~-d~ 82 (285)
.+.+++++|++ ++++ +.++.|..||. +++.+..+. ......+.++.+.++|+++++. . ++
T Consensus 38 ~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~--------------~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 38 ECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIA--------------APAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp CCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEE--------------CCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEc--------------CCCCccccccEECCCCCEEEEecCCCC
Confidence 57889999975 7887 45788999999 676432211 1223467889999999988884 4 67
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC----ceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN----SQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL 158 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 158 (285)
.|..++.. + +.+..+..... ......+++ .++++++++...++.|..||.. |+.+.+
T Consensus 100 ~v~~vd~~-G----------------k~l~~~~~~~~~~~~~~~~~~v~~-~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 100 TILEVNMK-G----------------EVLSKTEFETGIERPHAQFRQINK-NKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp EEEEECTT-S----------------CEEEEEEECCSCSSGGGSCSCCEE-CTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EEEEEeCC-C----------------CEEEEEeccCCCCcccccccCceE-CCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 77777753 3 34444431110 011445665 8899999999999999999998 999998
Q ss_pred EecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 159 MVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 159 ~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
+..+ ..+.++...++++.++++..++.|..+|+.++++
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 8764 4567788899999999888888999999986663
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=2.1e-09 Score=91.99 Aligned_cols=196 Identities=8% Similarity=0.028 Sum_probs=127.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEcc--CCcccCCcCCCCCcccccccccCCCCCcceEEEEEe----cCCCEEEE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIR--KCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS----NTSELLIS 78 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s----~~~~~l~s 78 (285)
.+..+.|+|++ +++++++.|+.|.+||+. +++. ...+.. ......++|+ |+|+++++
T Consensus 198 ~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~--------------v~~i~~--G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 198 AVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTT--------------VAEIKI--GSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp CEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCE--------------EEEEEC--CSEEEEEEECCSTTCTTTEEEE
T ss_pred CccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcE--------------eEEEec--CCCCceeEEccccCCCCCEEEE
Confidence 45689999986 788888999999999995 5542 122211 2235789999 69998777
Q ss_pred ec--CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC---------ceeeeeEEEecCCC-cEEEEecCCCeEE
Q 023246 79 YN--DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---------SQTVKGVNFFGPND-EYVMSGSDCGHLF 146 (285)
Q Consensus 79 ~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~-~~l~~~~~dg~v~ 146 (285)
++ +++|.++|..+. +.+..+..... ...+..+.. ++++ .+++.....|.|.
T Consensus 261 ~n~~~~~v~ViD~~t~----------------~~~~~i~~~~~~~~~~~~~p~~rva~i~~-s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 261 GAYWPPQYVIMDGETL----------------EPKKIQSTRGMTYDEQEYHPEPRVAAILA-SHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEETTEEEEEETTTC----------------CEEEEEECCEECTTTCCEESCCCEEEEEE-CSSSSEEEEEETTTTEEE
T ss_pred EEccCCeEEEEECCCC----------------cEEEEEeccccccccccccCCCceEEEEE-cCCCCEEEEEecCCCeEE
Confidence 53 899999998776 55555542210 012566765 6654 4566677789999
Q ss_pred EEecCCCceEEEEe-cccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCC-CC-----CCcccceeeccccCC-C
Q 023246 147 IWKKKGGKLVRLMV-GDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPP-LP-----DNAEKIMKANKQGRE-D 217 (285)
Q Consensus 147 vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~-~~-----~~~~~~~~~~~~~~~-~ 217 (285)
++|..+.+.+.... ........+.|+|+++++++++ .++.|.++|+.++++.. +. .|...... +..++ .
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~--~~~p~~g 401 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN--FVHPTFG 401 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE--EEETTTE
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee--eECCCCC
Confidence 99988765332221 2234567889999999966555 67899999998876421 11 12111111 12232 3
Q ss_pred ceEEEeC-CCCeEEEEEecc
Q 023246 218 HSRITLT-PDVIMHVLRLQR 236 (285)
Q Consensus 218 ~~~~~~s-~d~~i~vwd~~~ 236 (285)
..+++.. .++.|.++|...
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCT
T ss_pred cEEEeCCCCCCeEEEecCCC
Confidence 3444443 568999999887
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.31 E-value=1.4e-09 Score=88.36 Aligned_cols=176 Identities=9% Similarity=0.003 Sum_probs=114.5
Q ss_pred CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-----------CCcEEEEEcCCC
Q 023246 24 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-----------DELVYLFEKNMG 92 (285)
Q Consensus 24 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-----------d~~i~iwd~~~~ 92 (285)
.|+.|.+||..+++.. ..+ ..+..+ .++|+|+|+++++++ ++.|.+||..+.
T Consensus 29 ~d~~v~v~D~~t~~~~--------------~~i-~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFL--------------GMV-PTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGCEEEEEETTTCCEE--------------EEE-ECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred ccCeEEEEECCCCeEE--------------EEe-cCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4789999999888632 122 233344 899999999777642 567999999876
Q ss_pred CCCCCCCCCCccccCCCCceEeeccc----CceeeeeEEEecCCCcEEEEecC--CCeEEEEecCCCceEEE-Eeccccc
Q 023246 93 LGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRL-MVGDRHV 165 (285)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~~~~~~-~~~h~~~ 165 (285)
+.+..+.... .......+++ +|++++++++.. ++.|.+||+.+++.+.. +.. . .
T Consensus 92 ----------------~~~~~i~~~~~~~~~g~~p~~i~~-spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~ 152 (361)
T 2oiz_A 92 ----------------TFEKEISLPPKRVQGLNYDGLFRQ-TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-G 152 (361)
T ss_dssp ----------------CEEEEEEECTTBCCBCCCGGGEEE-CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-T
T ss_pred ----------------cEEEEEEcCccccccCCCcceEEE-CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-C
Confidence 5555554321 0112567887 999999988764 68999999999988877 543 2 2
Q ss_pred ceEeEEcCCC-CeEEEEecCCcEEEEcCCC-CCCC-------CCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 166 VNQLEPHPHI-PMFATCGIEKTVKLWAPMP-TDFP-------PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 166 v~~~~~~p~~-~~l~t~~~d~~i~iwd~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
...+.+.|++ ..+++.+.||.+.+|+... +++. .+.....++ ... ...+...++..+.++.++++|+..
T Consensus 153 ~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~~~~~~~~~v~v~d~~~ 230 (361)
T 2oiz_A 153 CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIA-PALDKDKAHFVSYYGNVYSADFSG 230 (361)
T ss_dssp EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSC-CEECSSEEEEEBTTSEEEEEECSS
T ss_pred cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEE-ecccCCEEEEEeCCCeEEEEEecC
Confidence 2335677776 4578888999999998754 3321 111111111 110 112233455566789999999865
Q ss_pred c
Q 023246 237 R 237 (285)
Q Consensus 237 ~ 237 (285)
.
T Consensus 231 ~ 231 (361)
T 2oiz_A 231 D 231 (361)
T ss_dssp S
T ss_pred C
Confidence 4
No 200
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.31 E-value=4e-11 Score=96.62 Aligned_cols=180 Identities=10% Similarity=0.119 Sum_probs=112.0
Q ss_pred eeEEEEcCCCCcEEEEeeCC---------------------------CcEEEEEccCCcccCCcCCCCCcccccccccCC
Q 023246 6 LNAIVIDPRNPNYFAVGGSD---------------------------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG 58 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~d---------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 (285)
+..++|+|++ ..|+.++.+ ..|.+||+.+++.. ..+ .
T Consensus 106 ~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~--------------~~l-~ 169 (347)
T 2gop_A 106 IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI--------------EEF-E 169 (347)
T ss_dssp EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE--------------EEE-E
T ss_pred ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE--------------eee-c
Confidence 7789999986 666666532 56888998877520 111 1
Q ss_pred CCCcceEEEEEecCCCEEEEec-C------C-cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEec
Q 023246 59 KNNIHITGLAYSNTSELLISYN-D------E-LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG 130 (285)
Q Consensus 59 ~h~~~v~~i~~s~~~~~l~s~~-d------~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 130 (285)
. . .+..+.|+|+| +++++. + . ...||.+.++ ....+..+ .. +.. + +
T Consensus 170 ~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-----------------~~~~l~~~-~~--~~~--~-s 223 (347)
T 2gop_A 170 K-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-----------------KEEKMFEK-VS--FYA--V-D 223 (347)
T ss_dssp E-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-----------------EEEEEEEE-ES--EEE--E-E
T ss_pred C-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-----------------ceEEeccC-cc--eee--E-C
Confidence 1 2 57789999999 777653 2 2 3445544333 33344333 22 333 3 7
Q ss_pred CCCcEEEEecCC--------CeEEEEecCCCceEEEEecccccceE-eEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCC
Q 023246 131 PNDEYVMSGSDC--------GHLFIWKKKGGKLVRLMVGDRHVVNQ-LEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLP 201 (285)
Q Consensus 131 ~~~~~l~~~~~d--------g~v~vwd~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~ 201 (285)
|+|++++.++.+ ..|++|| +++.......|...+.. +.|+ ++ .+++++.++.+++| +..+....+.
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~ 298 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA 298 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe
Confidence 899988776643 4788888 56655444556677886 8999 88 88899999999999 8744433333
Q ss_pred CCcccceeeccccCCCceEEEeCCCCeE-EEEEec
Q 023246 202 DNAEKIMKANKQGREDHSRITLTPDVIM-HVLRLQ 235 (285)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~s~d~~i-~vwd~~ 235 (285)
.+...+....+. + .++++++.++.. .+|.+.
T Consensus 299 ~~~~~v~~~~~s-~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 299 KGRHWIMGFDVD-E--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp CSSSEEEEEEES-S--SEEEEEECSSSCCEEEEES
T ss_pred cCCCeEEeeeee-C--cEEEEEcCCCChHHheEeC
Confidence 333334344332 2 566666666554 677665
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.30 E-value=1.7e-09 Score=86.48 Aligned_cols=222 Identities=9% Similarity=-0.022 Sum_probs=133.1
Q ss_pred eEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEE
Q 023246 7 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYL 86 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~i 86 (285)
.+..|+|+++.++++...++.|..||..+++.. . . .....+.+++|+++|+++++..++ |.+
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-------------~--~--~~~~~v~~i~~~~dg~l~v~~~~g-l~~ 113 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-------------V--H--ALPFMGSALAKISDSKQLIASDDG-LFL 113 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-------------E--E--ECSSCEEEEEEEETTEEEEEETTE-EEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-------------E--E--ECCCcceEEEEeCCCeEEEEECCC-EEE
Confidence 578999986678888888899999999876521 0 0 113468999999999988876444 999
Q ss_pred EEcCCCCCCCCCCCCCccccCCCCceEeecc---cCceeeeeEEEecCCCcEEEEecC------CCeEEEEecCCCceEE
Q 023246 87 FEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSD------CGHLFIWKKKGGKLVR 157 (285)
Q Consensus 87 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~vwd~~~~~~~~ 157 (285)
||..++ + ...+... .....+..+.+ +++|+++++... .+.|+.++ +++..
T Consensus 114 ~d~~~g----------------~-~~~~~~~~~~~~~~~~~~i~~-d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~- 172 (326)
T 2ghs_A 114 RDTATG----------------V-LTLHAELESDLPGNRSNDGRM-HPSGALWIGTMGRKAETGAGSIYHVA--KGKVT- 172 (326)
T ss_dssp EETTTC----------------C-EEEEECSSTTCTTEEEEEEEE-CTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-
T ss_pred EECCCC----------------c-EEEEeeCCCCCCCCCCCCEEE-CCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-
Confidence 998765 2 2222211 11134788987 999987776542 35677777 45443
Q ss_pred EEecccccceEeEEcCCCCeEEEE-ecCCcEEEEcCC--CC-CCC------CCCCCcccceeeccccCCCceEEEeCCCC
Q 023246 158 LMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPM--PT-DFP------PLPDNAEKIMKANKQGREDHSRITLTPDV 227 (285)
Q Consensus 158 ~~~~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~--~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~d~ 227 (285)
.+..+......++|+|+++.++.+ ..++.|.+|++. ++ .+. .+.........+ ....++.++++...++
T Consensus 173 ~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi-~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 173 KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGS-VCDAEGHIWNARWGEG 251 (326)
T ss_dssp EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEE-EECTTSCEEEEEETTT
T ss_pred EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCee-EECCCCCEEEEEeCCC
Confidence 333334457789999999876444 457899999985 44 321 111111111111 1223444566655668
Q ss_pred eEEEEEecccccceeEeeec-cccccCCC-CCcCeEEEeecCCC
Q 023246 228 IMHVLRLQRRQTLAYRERRY-NAADFESD-EEEGETYLLGFSDS 269 (285)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~~~~~~ 269 (285)
.|..|+. .++.+..+.... ....+..+ ++.+.+|+.....+
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 8999986 344433332211 12334433 44456777655543
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=3.7e-09 Score=83.09 Aligned_cols=193 Identities=9% Similarity=0.042 Sum_probs=127.9
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~ 82 (285)
..+.++++++++ .++++...++.|.+||.. ++.. ...+ ..+...+..+++.+++.++++.. ++
T Consensus 20 ~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~-------------~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~ 83 (300)
T 2qc5_A 20 SGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK-------------EFEV-PTPDAKVMCLIVSSLGDIWFTENGAN 83 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE-------------EEEC-SSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred CCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE-------------EEEC-CCCCCcceeEEECCCCCEEEEecCCC
Confidence 367789999975 777777778999999987 5421 0011 22345788999999999877764 78
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE-Eec
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MVG 161 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~~ 161 (285)
.|..||.. + +. ..+........+.++++ +++++++++...++.|..+|.. ++.... +..
T Consensus 84 ~v~~~d~~-g----------------~~-~~~~~~~~~~~~~~i~~-~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~ 143 (300)
T 2qc5_A 84 KIGKLSKK-G----------------GF-TEYPLPQPDSGPYGITE-GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPN 143 (300)
T ss_dssp EEEEECTT-S----------------CE-EEEECSSTTCCEEEEEE-CSTTCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred eEEEECCC-C----------------Ce-EEecCCCCCCCCccceE-CCCCCEEEEccCCCeEEEECCC-CCEEEccCCC
Confidence 89999987 4 22 22322111123788987 8899988888778899999987 655432 233
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCC--CCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL--PDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
....+..++++++++.+++...++.|..++. .+....+ ......+..+.. ..++.++++....+.|.+++.
T Consensus 144 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 144 KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITS-GNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE-CTTSSEEEEETTTTEEEEECT
T ss_pred CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEE-CCCCCEEEEccCCCEEEEEcC
Confidence 3467889999999997776666788999998 4332221 111122222222 234456666666778888886
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.28 E-value=9.3e-10 Score=94.24 Aligned_cols=190 Identities=8% Similarity=0.001 Sum_probs=128.9
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcEEEEEcC--CCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVYLFEKN--MGL 93 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~iwd~~--~~~ 93 (285)
.++++...+++|.++|..+++.+. .+ . ....+..+.|+|+|+++.++ .++.|.+||+. +.
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~--------------~i-~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~- 230 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKT--------------VL-D-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP- 230 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEE--------------EE-E-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-
T ss_pred eEEEEeCCCCeEEEEECCCCeEEE--------------EE-e-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC-
Confidence 567777789999999999887432 21 1 12246689999999987775 58999999995 44
Q ss_pred CCCCCCCCCccccCCCCceEeecccCceeeeeEEEec----CCCcEEEEecC-CCeEEEEecCCCceEEEEecc------
Q 023246 94 GPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG----PNDEYVMSGSD-CGHLFIWKKKGGKLVRLMVGD------ 162 (285)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~h------ 162 (285)
+.+..+..... ...++| + |+|+++++++. ++.|.++|..+.+.+..+...
T Consensus 231 ---------------~~v~~i~~G~~---P~~ia~-s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 231 ---------------TTVAEIKIGSE---ARSIET-SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp ---------------CEEEEEECCSE---EEEEEE-CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred ---------------cEeEEEecCCC---CceeEE-ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 45555554332 578887 8 69998877665 699999999999998876532
Q ss_pred -----cccceEeEEcCCCCe-EEEEecCCcEEEEcCCCCCC---CCCCCCcccceeeccccCCCceE-EEeCCCCeEEEE
Q 023246 163 -----RHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPTDF---PPLPDNAEKIMKANKQGREDHSR-ITLTPDVIMHVL 232 (285)
Q Consensus 163 -----~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~s~d~~i~vw 232 (285)
...+..+..++++.. ++....+|.|.++|...... ..+. ......... +.++++++ ++...++.|.++
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~-~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGG-LDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEE-ECTTSCEEEEEEGGGTEEEEE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCce-ECCCCCEEEEEeCCCCeEEEE
Confidence 125678888888766 55556779999999865431 1110 001111111 23445554 555668999999
Q ss_pred EecccccceeEe
Q 023246 233 RLQRRQTLAYRE 244 (285)
Q Consensus 233 d~~~~~~~~~~~ 244 (285)
|+.+++....+.
T Consensus 370 D~~t~kl~~~i~ 381 (567)
T 1qks_A 370 DTKEGKLVAIED 381 (567)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCcEEEEEe
Confidence 999887665553
No 204
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.28 E-value=1.6e-12 Score=105.92 Aligned_cols=188 Identities=9% Similarity=0.013 Sum_probs=95.6
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ecCCcEEEEEcCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YNDELVYLFEKNMGLGP 95 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~d~~i~iwd~~~~~~~ 95 (285)
.++++++.||.|+.||..+++....... +.+.+..+..++..+++ +.|+.|+.||..++
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG--- 69 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE-----------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN--- 69 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC-----------------CCSCCCC-----CCEEECTTTCCEEEC--------
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC-----------------CCceecceEcCCCEEEEeCCCCEEEEEECCCC---
Confidence 6899999999999999999985432211 12333334456766666 46999999999877
Q ss_pred CCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCC
Q 023246 96 SPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI 175 (285)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 175 (285)
+.+..+..+... .+.+.-. -..+..+++++.++.|+.||..+|+.+..+..+. ...++|++
T Consensus 70 -------------~~~w~~~~~~~~-~~~~sp~-~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~ 130 (369)
T 2hz6_A 70 -------------EGLTKLPFTIPE-LVQASPC-RSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPST 130 (369)
T ss_dssp -------------CCSEECSCCHHH-HHTTCSC-C-----CCCCEEEEEEEEECCC------------------------
T ss_pred -------------ceeeeeeccCcc-ccccCce-EecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccC
Confidence 444444322111 0111100 1135577888889999999999999988776543 23456788
Q ss_pred CeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 176 PMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 176 ~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
..+++++.|+.|+.||++++++ .++...................++.++.++.++.||..+++.+-..
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp --EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred CEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 8899999999999999988764 2221111000000000001146777889999999999888765433
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=1.2e-10 Score=94.43 Aligned_cols=130 Identities=8% Similarity=-0.008 Sum_probs=96.2
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVY 85 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~ 85 (285)
|+.++| ++ .+|+++ .++.|++||+.+... .... ..|..++.++.+.+.. +++...||.|.
T Consensus 90 V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~--------------~~~~-~~~~~~v~~i~~~~p~-~av~~~dG~L~ 149 (388)
T 1xip_A 90 VIFVCF--HG-DQVLVS-TRNALYSLDLEELSE--------------FRTV-TSFEKPVFQLKNVNNT-LVILNSVNDLS 149 (388)
T ss_dssp EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTC--------------EEEE-EECSSCEEEEEECSSE-EEEEETTSEEE
T ss_pred eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhc--------------cCcc-ceeecceeeEEecCCC-EEEEECCCCEE
Confidence 899999 55 788888 889999999986541 1111 3445567888777653 44446799999
Q ss_pred EEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCce--EEEE----
Q 023246 86 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL--VRLM---- 159 (285)
Q Consensus 86 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~---- 159 (285)
+||+..+ ... . +... |.+++| +|+| ++.|..||.+++|+...++. ..++
T Consensus 150 v~dl~~~----------------~~~-~---~~~~--Vs~v~W-SpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 150 ALDLRTK----------------STK-Q---LAQN--VTSFDV-TNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPS 204 (388)
T ss_dssp EEETTTC----------------CEE-E---EEES--EEEEEE-CSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCH
T ss_pred EEEccCC----------------ccc-c---ccCC--ceEEEE-cCCc--eEEEEcCCcEEEEcCCCccccccceecCCc
Confidence 9999866 222 1 2323 999995 9999 67788899999999887665 5566
Q ss_pred --e---cccccceEeEEcCCCCeEEE
Q 023246 160 --V---GDRHVVNQLEPHPHIPMFAT 180 (285)
Q Consensus 160 --~---~h~~~v~~~~~~p~~~~l~t 180 (285)
. +|...|.++.|.+++.++++
T Consensus 205 ~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 205 ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ccccccCCCeeEEEEEEecCCeEEEE
Confidence 2 36788999999999888765
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=3.2e-09 Score=84.14 Aligned_cols=199 Identities=11% Similarity=0.040 Sum_probs=122.9
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCC-cCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSP-ISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D 81 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d 81 (285)
..+.++++++++++++++.. .+.|.+||.. ++.... .. .........+.+++++++|+++++.. +
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~-----------~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKK-----------DSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSB-----------CTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred CCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEec-----------cCCCccccCCcCEEECCCCCEEEEecCc
Confidence 45788999997235555444 4478889987 653211 00 00011234578999999999877753 4
Q ss_pred ---------------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEec----CCCcEE-EEecC
Q 023246 82 ---------------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG----PNDEYV-MSGSD 141 (285)
Q Consensus 82 ---------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l-~~~~~ 141 (285)
+.|..|+.. + +. ..+..+... ...+++ + ++++.+ ++...
T Consensus 138 ~~~~~~~~~~~~~~~~~l~~~~~~-g----------------~~-~~~~~~~~~--~~~i~~-~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 138 EVAPADYTRSMQEKFGSIYCFTTD-G----------------QM-IQVDTAFQF--PNGIAV-RHMNDGRPYQLIVAETP 196 (314)
T ss_dssp BCTTSCCCBTTSSSCEEEEEECTT-S----------------CE-EEEEEEESS--EEEEEE-EECTTSCEEEEEEEETT
T ss_pred ccccccccccccCCCCeEEEECCC-C----------------CE-EEeccCCCC--cceEEE-ecccCCCCCEEEEEECC
Confidence 466666654 3 22 222222222 567886 8 888655 44567
Q ss_pred CCeEEEEecC-CCce-----EEEEeccc-ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccc
Q 023246 142 CGHLFIWKKK-GGKL-----VRLMVGDR-HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQ 213 (285)
Q Consensus 142 dg~v~vwd~~-~~~~-----~~~~~~h~-~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~ 213 (285)
++.|.+||+. +++. ...+..+. ..+..++++++++++++...++.|..|++.+++. ..+..+...+..+..
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~- 275 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF- 275 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE-
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE-
Confidence 8999999986 4442 22333333 5678899999999888877788999999985443 333223233333433
Q ss_pred cCCCc-eEEEeCCCCeEEEEEeccc
Q 023246 214 GREDH-SRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 214 ~~~~~-~~~~~s~d~~i~vwd~~~~ 237 (285)
..++. ++++...++.|..|++...
T Consensus 276 ~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 276 KPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 34444 5566666788888887653
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.24 E-value=4e-10 Score=100.18 Aligned_cols=157 Identities=8% Similarity=-0.044 Sum_probs=99.2
Q ss_pred CCCCcceEEEEEecCCCEEEEec--C----CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC
Q 023246 58 GKNNIHITGLAYSNTSELLISYN--D----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP 131 (285)
Q Consensus 58 ~~h~~~v~~i~~s~~~~~l~s~~--d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (285)
.+|...+..++|||||++|+.+. + .+|++||+.++ +.+.. ..+. ..+..++| +|
T Consensus 159 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg----------------~~~~~-~~~~--~~~~~~~w-sp 218 (741)
T 1yr2_A 159 KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG----------------KPLAD-ELKW--VKFSGLAW-LG 218 (741)
T ss_dssp ----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC----------------CEEEE-EEEE--EESCCCEE-ST
T ss_pred cCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC----------------CCCCc-cCCC--ceeccEEE-EC
Confidence 45556788999999999887743 2 36999999887 33221 1111 11356775 99
Q ss_pred CCcEEEEecCCC--------------eEEEEecCCCce--EEEEe--cccccceEeEEcCCCCeEEEEecCC-----cEE
Q 023246 132 NDEYVMSGSDCG--------------HLFIWKKKGGKL--VRLMV--GDRHVVNQLEPHPHIPMFATCGIEK-----TVK 188 (285)
Q Consensus 132 ~~~~l~~~~~dg--------------~v~vwd~~~~~~--~~~~~--~h~~~v~~~~~~p~~~~l~t~~~d~-----~i~ 188 (285)
+ +.|+.++.++ .|++|++.+++. ...+. .+...+..+.|+|+|++|+..+.++ .|+
T Consensus 219 D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~ 297 (741)
T 1yr2_A 219 N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVH 297 (741)
T ss_dssp T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEE
T ss_pred C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEE
Confidence 9 8887776554 389999977652 22233 2333578999999999988777544 899
Q ss_pred EEcCCCC--C-CCCCCCCcccceeeccccCCCceEEEeCC----CCeEEEEEeccc
Q 023246 189 LWAPMPT--D-FPPLPDNAEKIMKANKQGREDHSRITLTP----DVIMHVLRLQRR 237 (285)
Q Consensus 189 iwd~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----d~~i~vwd~~~~ 237 (285)
+||+.++ . ...+..+........ .++++.++..+. ++.|.+||+...
T Consensus 298 ~~d~~~~~~~~~~~l~~~~~~~~~~~--~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 298 VARVTNGKIGPVTALIPDLKAQWDFV--DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEETTEECCCEEEECSSSSCEEEE--EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCCcccEEecCCCCceEEEE--eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 9999766 4 444443333333332 234444444443 466999998764
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.24 E-value=9.7e-09 Score=80.65 Aligned_cols=193 Identities=5% Similarity=0.041 Sum_probs=125.7
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~ 82 (285)
..+.++++++++ .++++...++.|..||.. ++.. ..........+..+++.++++++++.. ++
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~--------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 125 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFT--------------EYPLPQPDSGPYGITEGLNGDIWFTQLNGD 125 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE--------------EEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeE--------------EecCCCCCCCCccceECCCCCEEEEccCCC
Confidence 457789999975 677776667889999987 5421 001122235688999999999887765 78
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEE-Eec
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRL-MVG 161 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~~ 161 (285)
.|..++.. + +.. .+........+..+++ ++++++.++...++.|..+|. +++.... +..
T Consensus 126 ~i~~~~~~-g----------------~~~-~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 185 (300)
T 2qc5_A 126 RIGKLTAD-G----------------TIY-EYDLPNKGSYPAFITL-GSDNALWFTENQNNSIGRITN-TGKLEEYPLPT 185 (300)
T ss_dssp EEEEECTT-S----------------CEE-EEECSSTTCCEEEEEE-CTTSSEEEEETTTTEEEEECT-TCCEEEEECSS
T ss_pred eEEEECCC-C----------------CEE-EccCCCCCCCceeEEE-CCCCCEEEEecCCCeEEEECC-CCcEEEeeCCC
Confidence 89999876 3 222 2221111123788887 899997777777889999998 5655432 223
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCC--CCCCcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPP--LPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
+...+..+++++++...++....+.|..|+.. +.... +......+..+.. ..++.++++...++.|..++.
T Consensus 186 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~-d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 186 NAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEISEYDIPTPNARPHAITA-GKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEE-CSTTCEEEEETTTTEEEEECT
T ss_pred CCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEEEEECCCCCCCceEEEE-CCCCCEEEeccCCCeEEEECC
Confidence 44568899999999877766667789999983 33211 2112222222222 234456666666788888886
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=7.3e-09 Score=83.78 Aligned_cols=219 Identities=10% Similarity=-0.036 Sum_probs=130.1
Q ss_pred EEEcCCCCcEEEEeeC-----CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec---
Q 023246 9 IVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--- 80 (285)
Q Consensus 9 ~~~s~~~~~~l~tg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~--- 80 (285)
....|++ ..+++... ++.|.+.|..+++.+. .+..+ ..+ . ++++|+|+++..++
T Consensus 38 ~~~~pd~-~~vyV~~~~~~~~~~~V~ViD~~t~~v~~--------------~I~vG-~~P-~-va~spDG~~lyVan~~~ 99 (386)
T 3sjl_D 38 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGRVIG--------------MIDGG-FLP-N-PVVADDGSFIAHASTVF 99 (386)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTEEEE--------------EEEEC-SSC-E-EEECTTSSCEEEEEEEE
T ss_pred eccCCCC-CEEEEEcCcccCCCCEEEEEECCCCeEEE--------------EEECC-CCC-c-EEECCCCCEEEEEcccc
Confidence 4456876 55555543 6899999999887432 22112 223 3 99999998665532
Q ss_pred --------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC-----ceeeeeEEEecCCCcEEEEecC--CCeE
Q 023246 81 --------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-----SQTVKGVNFFGPNDEYVMSGSD--CGHL 145 (285)
Q Consensus 81 --------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~~~~~--dg~v 145 (285)
++.|.+||..+. +.+..+..... ......+.+ +|+|++++.+.. ++.|
T Consensus 100 ~r~~~G~~~~~VsviD~~t~----------------~v~~~I~v~~g~r~~~g~~P~~~a~-spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTL----------------LPTADIELPDAPRFLVGTYPWMTSL-TPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EETTEEEEEEEEEEECTTTC----------------CEEEEEEETTCCCCCBSCCGGGEEE-CTTSSEEEEEECSSSCEE
T ss_pred cccccCCCCCEEEEEECCCC----------------eEEEEEECCCccccccCCCCceEEE-cCCCCEEEEEEcCCCCeE
Confidence 578999999887 56666542210 012566887 999999888763 6899
Q ss_pred EEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCC-CCCC-----CCCCCccccee-eccccCCCc
Q 023246 146 FIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP-TDFP-----PLPDNAEKIMK-ANKQGREDH 218 (285)
Q Consensus 146 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~-~~~~-----~~~~~~~~~~~-~~~~~~~~~ 218 (285)
.++|+.+++.+.++.... . ...+....+.+++.+.||.+.+.++.. +++. .+......+.. ..+...+++
T Consensus 163 sVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~ 239 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR 239 (386)
T ss_dssp EEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred EEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc
Confidence 999999999998886422 1 122322344567777888888888754 4431 11101111111 111112333
Q ss_pred eEEEeCCCCeEEEEEecccc--cceeEe----------eeccc-cccCCCCCcCeEEEeec
Q 023246 219 SRITLTPDVIMHVLRLQRRQ--TLAYRE----------RRYNA-ADFESDEEEGETYLLGF 266 (285)
Q Consensus 219 ~~~~~s~d~~i~vwd~~~~~--~~~~~~----------~~~~~-~~~~~~~~~~~v~~~~~ 266 (285)
+++ .+.+|.+++.|+.... ....+. +.+.+ +.+..+.+.+++|+..-
T Consensus 240 ~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 240 LVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp EEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred EEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEec
Confidence 333 5668999999987653 222222 12222 33444566777888643
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.19 E-value=3e-09 Score=84.28 Aligned_cols=152 Identities=11% Similarity=0.048 Sum_probs=104.5
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-CCcE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-DELV 84 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d~~i 84 (285)
..+..|+|++..+++++..++.|..|+. +++. .. + ..+...+..++++++|+++++.. ++.|
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~----------~~-----~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v 109 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV----------DV-----L-LDATAFTNGNAVDAQQRLVHCEHGRRAI 109 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE----------EE-----E-EESCSCEEEEEECTTSCEEEEETTTTEE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE----------EE-----E-eCCCCccceeeECCCCCEEEEECCCCEE
Confidence 4578899987447888888999999987 3431 00 1 22345688999999999877764 6789
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc---eeeeeEEEecCCCcEEEE----ecC-------------CCe
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS---QTVKGVNFFGPNDEYVMS----GSD-------------CGH 144 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~l~~----~~~-------------dg~ 144 (285)
.+|+.. + + ...+...... ..+..+++ +++|++.++ |.. .+.
T Consensus 110 ~~~~~~-g----------------~-~~~~~~~~~~~~~~~~~~i~~-d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~ 170 (305)
T 3dr2_A 110 TRSDAD-G----------------Q-AHLLVGRYAGKRLNSPNDLIV-ARDGAIWFTDPPFGLRKPSQGCPADPELAHHS 170 (305)
T ss_dssp EEECTT-S----------------C-EEEEECEETTEECSCCCCEEE-CTTSCEEEECCSGGGSCGGGSCCCCCSSSCEE
T ss_pred EEECCC-C----------------C-EEEEEeccCCCccCCCCCEEE-CCCCCEEEeCcCCCccccccccccccccCCCe
Confidence 999875 3 1 2222211111 12677887 999998886 432 367
Q ss_pred EEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecC------CcEEEEcCCCC
Q 023246 145 LFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE------KTVKLWAPMPT 195 (285)
Q Consensus 145 v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d------~~i~iwd~~~~ 195 (285)
|+.+|..+++..... .......++|+|+++.|+.+... +.|..|++...
T Consensus 171 v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 888888777655433 34567889999999987776654 68999998643
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.12 E-value=1.8e-09 Score=95.18 Aligned_cols=196 Identities=9% Similarity=0.118 Sum_probs=114.7
Q ss_pred ceeEEEEcCCCCcEEEEe-----eCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe
Q 023246 5 RLNAIVIDPRNPNYFAVG-----GSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY 79 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~ 79 (285)
.+.+++||||+ .+||.+ +...+|++||+.+++.. ..... ......++|+ |++.|+.+
T Consensus 130 ~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~--------------~~~~~--~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 130 ALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPL--------------ETPLK--DVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp EEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEE--------------EEEEE--EEESCCCEEE-TTTEEEEE
T ss_pred EEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCC--------------ccccC--CceeccEEEe-CCCEEEEE
Confidence 47788999987 666632 22357999999988731 11001 1112467899 99866664
Q ss_pred -cCC-------------cEEEEEcCCCCCCCCCCCCCccccCCCCceEeeccc-CceeeeeEEEecCCCcEEEEec----
Q 023246 80 -NDE-------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR-NSQTVKGVNFFGPNDEYVMSGS---- 140 (285)
Q Consensus 80 -~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~---- 140 (285)
.+. .|++|++.+.. .+....+.... .......+.+ +|++++++...
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~--------------~~~~~v~~~~~~~~~~~~~~~~-SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQ--------------EDDRLVFGAIPAQHHRYVGATV-TEDDRFLLISAANST 256 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCG--------------GGCEEEESCSGGGCCSEEEEEE-CTTSCEEEEEEESSS
T ss_pred EecCcccccccccCCCcEEEEEECCCCc--------------ccceEEEecCCCCCeEEEEEEE-cCCCCEEEEEEccCC
Confidence 343 39999987651 01122333222 1222667776 99999885433
Q ss_pred CCCeEEEEecCCCc-eEEEEecccccceEeEEcCCCCeEEEE-ecC---CcEEEEcCCCCCC---CCCCCCcccceeecc
Q 023246 141 DCGHLFIWKKKGGK-LVRLMVGDRHVVNQLEPHPHIPMFATC-GIE---KTVKLWAPMPTDF---PPLPDNAEKIMKANK 212 (285)
Q Consensus 141 ~dg~v~vwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~t~-~~d---~~i~iwd~~~~~~---~~~~~~~~~~~~~~~ 212 (285)
....|+++|+.+++ ....+..+....... |++++..|+.. ..+ +.|..+++.++.. ..+..+...+. .
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~- 332 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T- 332 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E-
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E-
Confidence 23589999998764 345555565555554 66666664444 333 5788999877543 33434444443 2
Q ss_pred ccCCCc-eEEEeCCCC--eEEEEEeccc
Q 023246 213 QGREDH-SRITLTPDV--IMHVLRLQRR 237 (285)
Q Consensus 213 ~~~~~~-~~~~~s~d~--~i~vwd~~~~ 237 (285)
.....+ ++++...++ .|++|++..+
T Consensus 333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 333 VHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 233333 444444454 6888887643
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.11 E-value=2.5e-08 Score=78.61 Aligned_cols=161 Identities=7% Similarity=0.043 Sum_probs=103.6
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-C-
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-D- 81 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-d- 81 (285)
..+.+++++|++ .++++ . ++.|.+||..+++.... ... ........+..++++|+|+++++.. .
T Consensus 54 ~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~----------~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~~ 119 (297)
T 3g4e_A 54 APVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVL----------ATV-DNDKKNNRFNDGKVDPAGRYFAGTMAEE 119 (297)
T ss_dssp SCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEE----------EEC-CTTCSSEEEEEEEECTTSCEEEEEEECC
T ss_pred CceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEE----------Eec-CCCCCCCCCCCEEECCCCCEEEecCCcc
Confidence 467899999986 55554 3 56899999987753211 000 0011234688999999999777642 1
Q ss_pred --------CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE-EEecCCCeEEEEec--
Q 023246 82 --------ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKK-- 150 (285)
Q Consensus 82 --------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~vwd~-- 150 (285)
..-.||.+... .....+...... ...++| +|+++.+ ++.+.++.|.+|++
T Consensus 120 ~~~~~~~~~~~~l~~~d~~----------------g~~~~~~~~~~~--pngi~~-spdg~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 120 TAPAVLERHQGALYSLFPD----------------HHVKKYFDQVDI--SNGLDW-SLDHKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp SBTTBCCTTCEEEEEECTT----------------SCEEEEEEEESB--EEEEEE-CTTSCEEEEEEGGGTEEEEEEECT
T ss_pred cccccccCCCcEEEEEECC----------------CCEEEEeecccc--ccceEE-cCCCCEEEEecCCCCcEEEEeccC
Confidence 23455555432 122222222222 678886 9999866 55666889999987
Q ss_pred CCCceE-----EEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 151 KGGKLV-----RLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 151 ~~~~~~-----~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
.++... ..+..+...+..++++++|++.++....+.|..||+.++++
T Consensus 181 ~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 181 QTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp TTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred CCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 455432 22333445678999999998887777778899999986653
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=1.1e-08 Score=82.36 Aligned_cols=233 Identities=9% Similarity=-0.004 Sum_probs=135.1
Q ss_pred ceeEEEEcCCCCcEEEEee--CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-c-
Q 023246 5 RLNAIVIDPRNPNYFAVGG--SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-N- 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~- 80 (285)
....++++|++ +++++.. .++.++||.+.+++... + +. .. .....|...+..++++++++++++. .
T Consensus 18 ~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~~~-~--p~----~~--~~~~~~~~~p~gv~~d~~g~L~v~D~g~ 87 (343)
T 2qe8_A 18 APGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGLIP-F--PP----QS--GNAIITFDTVLGIKSDGNGIVWMLDNGN 87 (343)
T ss_dssp CEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEEEE-S--CC----CC--SSCCCCCSCEEEEEECSSSEEEEEECHH
T ss_pred CcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCeec-C--CC----cc--cCcccceeEeeEEEEcCCCcEEEEcCCC
Confidence 46789999986 7888753 23446677665443210 0 00 00 1113456789999999999877764 2
Q ss_pred ----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeeccc----CceeeeeEEEecCC-CcEEEEec---CCCeEEEE
Q 023246 81 ----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR----NSQTVKGVNFFGPN-DEYVMSGS---DCGHLFIW 148 (285)
Q Consensus 81 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~-~~~l~~~~---~dg~v~vw 148 (285)
+..|.+||+.++ +.+..+.... ....+..+++ +++ +..+++-. .++.|.+|
T Consensus 88 ~~~~~~~i~~~d~~tg----------------~~~~~~~~~~~~~~~~~~~~~v~v-d~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNN----------------QLSRVIYLPPPITLSNSFVNDLAV-DLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp HHTSCCEEEEEETTTT----------------EEEEEEECCTTTSCTTCCCCEEEE-ETTTTEEEEEECCSGGGCEEEEE
T ss_pred CcCCCCeEEEEECCCC----------------eEEEEEECChhhcccccccceEEE-ecCCCEEEEEcCccCCCCeEEEE
Confidence 578999999876 4445444221 1122678887 765 44445555 67899999
Q ss_pred ecCCCceEEEEeccc-----------------------------ccceEeEEcCCCCeEEEEecCC-cEEEEcCC---CC
Q 023246 149 KKKGGKLVRLMVGDR-----------------------------HVVNQLEPHPHIPMFATCGIEK-TVKLWAPM---PT 195 (285)
Q Consensus 149 d~~~~~~~~~~~~h~-----------------------------~~v~~~~~~p~~~~l~t~~~d~-~i~iwd~~---~~ 195 (285)
|+.+++..+.+.+|. ..+..++|+|+++.|+.+..++ .+..++.. ..
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 998887766554321 1357899999999888877665 44444321 11
Q ss_pred CC------CCCC--CCcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEeeec---cccccCCCCCcCeEEEe
Q 023246 196 DF------PPLP--DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRY---NAADFESDEEEGETYLL 264 (285)
Q Consensus 196 ~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~ 264 (285)
.+ ..+. ++......+ ....++.++++...++.|.+||...++.. .+...+ ....+..+. ++.+|+.
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgi-a~d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~-~g~l~v~ 307 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGI-SIDKDHNIYVGDLAHSAIGVITSADRAYK-LLVTDEKLSWTDSFNFGS-DGYLYFD 307 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCE-EECTTCCEEEEEGGGTEEEEEETTTTEEE-EEEECGGGSCEEEEEECT-TSCEEEE
T ss_pred CCChhhhhcceEecccCCCCceE-EECCCCCEEEEccCCCeEEEEECCCCCEE-EEEECCceecCCeeEECC-CCcEEEE
Confidence 11 0110 010111111 11234568888888899999997344322 222111 122333333 3678887
Q ss_pred ecC
Q 023246 265 GFS 267 (285)
Q Consensus 265 ~~~ 267 (285)
...
T Consensus 308 ~~~ 310 (343)
T 2qe8_A 308 CNQ 310 (343)
T ss_dssp ECC
T ss_pred eCc
Confidence 643
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=5.4e-08 Score=77.77 Aligned_cols=155 Identities=10% Similarity=-0.021 Sum_probs=98.9
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCC-CCCcceEEEEEecCCCEEEEec--
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYN-- 80 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~s~~~~~l~s~~-- 80 (285)
..+.+++|+|++ .++++. .+ .|.+||..+++.... ..... .....+..++++|+|+++++..
T Consensus 90 ~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~------------~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 90 FMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLH------------AELESDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp SCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEE------------ECSSTTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred CcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEE------------eeCCCCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 357889999975 666543 44 489999887753111 00001 1234688999999999777643
Q ss_pred -----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEE-EEecCCCeEEEEecC--C
Q 023246 81 -----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYV-MSGSDCGHLFIWKKK--G 152 (285)
Q Consensus 81 -----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~vwd~~--~ 152 (285)
.+.|..++ .+ ....+...... ...++| +++++.+ ++.+.++.|.+|++. +
T Consensus 155 ~~~~~~~~l~~~~--~g-----------------~~~~~~~~~~~--~~~i~~-s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 155 KAETGAGSIYHVA--KG-----------------KVTKLFADISI--PNSICF-SPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp TCCTTCEEEEEEE--TT-----------------EEEEEEEEESS--EEEEEE-CTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred cCCCCceEEEEEe--CC-----------------cEEEeeCCCcc--cCCeEE-cCCCCEEEEEECCCCEEEEEEccccc
Confidence 24555555 33 22223222222 567886 9999866 445567899999985 5
Q ss_pred C-ce-----EEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCC
Q 023246 153 G-KL-----VRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT 195 (285)
Q Consensus 153 ~-~~-----~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 195 (285)
+ +. +..+......+..+++++++.+.++...++.|..|++...
T Consensus 213 Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 213 GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred CCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 5 32 2233333456788999999988777666788999998543
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.04 E-value=4.2e-08 Score=80.93 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=101.3
Q ss_pred EEEcCCCCcEEEEeeCCC--cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEecCCcEE
Q 023246 9 IVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYNDELVY 85 (285)
Q Consensus 9 ~~~s~~~~~~l~tg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~~d~~i~ 85 (285)
++|+|++ ..|+++..++ .|.+|+...+..... ...........+.+++++| ++.++++..++.|+
T Consensus 176 ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~~~-----------~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~ 243 (409)
T 3hrp_A 176 PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAPTR-----------IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFG 243 (409)
T ss_dssp CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCEEE-----------EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEE
T ss_pred eeEecCC-CcEEEEecCCCceEEEEEcCCCceeEE-----------eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEE
Confidence 8899986 6777777665 688888765431100 0000011345677899999 55666644588999
Q ss_pred EEEcCCCCCCCCCCCCCccccCCCCceEe-----ecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 86 LFEKNMGLGPSPLSLSPEDLQKREEPQVY-----SGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 86 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
.||.... ....+ .+.....+...++| +| ++.++++-...+.|+.|+... + +..+
T Consensus 244 ~~d~~~~-----------------~~~~~~~~~~~g~~~~~P~~~ia~-~p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~ 303 (409)
T 3hrp_A 244 RFNVKTQ-----------------EVTLIKQLELSGSLGTNPGPYLIY-YFVDSNFYMSDQNLSSVYKITPDG-E-CEWF 303 (409)
T ss_dssp EEETTTC-----------------CEEEEEECCCCSCCCCSSCCEEEE-ETTTTEEEEEETTTTEEEEECTTC-C-EEEE
T ss_pred EEECCCC-----------------CEEEEecccccCCCCCCccccEEE-eCCCCEEEEEeCCCCEEEEEecCC-C-EEEE
Confidence 9998765 22222 11111100128887 88 567777777889999999863 3 3333
Q ss_pred eccc---------------ccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCC
Q 023246 160 VGDR---------------HVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFP 198 (285)
Q Consensus 160 ~~h~---------------~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~ 198 (285)
.++. .....++++|+++++++-. .++.|+.|++..+.+.
T Consensus 304 ~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 304 CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 3332 3478899999999877777 7889999997665543
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.02 E-value=2.3e-07 Score=75.50 Aligned_cols=155 Identities=11% Similarity=-0.037 Sum_probs=93.7
Q ss_pred EEEEcCCCCcEEEEee----------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 8 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
.++++||+ ..++++. .++.|.+||..+.+....+....+ ... .+......+.|+|+|++|+
T Consensus 70 ~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~------~~~--~~g~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 70 NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA------PRF--DVGPYSWMNANTPNNADLL 140 (373)
T ss_pred CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc------ccc--ccCCCccceEECCCCCEEE
Confidence 78999987 6666654 367899999987764332221100 000 0112345899999999877
Q ss_pred Eec---CCcEEEEEcCCCCCCCCCCCCCccccCCCCceE-eecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCC
Q 023246 78 SYN---DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 153 (285)
Q Consensus 78 s~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 153 (285)
.++ ++.|.++| .++ +.+.. +.... ++.+.....+.+++.+.||.+.++|. ++
T Consensus 141 v~n~~~~~~v~viD-~t~----------------~~~~~~i~~~~------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGG----------------SSDDQLLSSPT------CYHIHPGAPSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred EEecCCCCeEEEEE-CCC----------------CEEeEEcCCCc------eEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence 643 57899999 876 45444 33211 12221223345667778999999999 88
Q ss_pred ceEEEEe-----cccccc-eEeEEcCCCCeEEEEecCCcEEEEcCCCC
Q 023246 154 KLVRLMV-----GDRHVV-NQLEPHPHIPMFATCGIEKTVKLWAPMPT 195 (285)
Q Consensus 154 ~~~~~~~-----~h~~~v-~~~~~~p~~~~l~t~~~d~~i~iwd~~~~ 195 (285)
+.+.... ....++ ....+.+++..++..+..+.+.+.|+...
T Consensus 197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 7764322 111121 23455666655444446788999998654
No 217
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.01 E-value=4.5e-07 Score=73.77 Aligned_cols=145 Identities=10% Similarity=-0.051 Sum_probs=95.3
Q ss_pred EcCCCCcEEEEeeC--CC---cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-----
Q 023246 11 IDPRNPNYFAVGGS--DE---YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN----- 80 (285)
Q Consensus 11 ~s~~~~~~l~tg~~--dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~----- 80 (285)
..|++ ..+++... .. +|.+||..+++.. ..+..+ ..+ .++++|+|+++..++
T Consensus 28 ~~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~--------------~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~ 89 (373)
T 2mad_H 28 PGADG-RRSYINLPAHHSAIIQQWVLDAGSGSIL--------------GHVNGG-FLP--NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred CCCCC-CEEEEeCCcccCCccEEEEEECCCCeEE--------------EEecCC-CCC--CeEECCCCCEEEEEeccccc
Confidence 34654 55555543 33 8899999988732 112111 223 899999999777653
Q ss_pred ------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc-cC----ceeeeeEEEecCCCcEEEEecC--CCeEEE
Q 023246 81 ------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-RN----SQTVKGVNFFGPNDEYVMSGSD--CGHLFI 147 (285)
Q Consensus 81 ------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~i~~~~~~~~~~~~l~~~~~--dg~v~v 147 (285)
++.|.+||..+. +.+..+... .. ......+.+ +|++++++.++. ++.|.+
T Consensus 90 ~~rg~~~~~v~viD~~t~----------------~~~~~i~~~~~~~~~~g~~p~~~~~-spDG~~l~v~n~~~~~~v~v 152 (373)
T 2mad_H 90 IAKGKRTDYVEVFDPVTF----------------LPIADIELPDAPRFDVGPYSWMNAN-TPNNADLLFFQFAAGPAVGL 152 (373)
T ss_pred cccCCCCCeEEEEECCCC----------------cEEEEEECCCccccccCCCccceEE-CCCCCEEEEEecCCCCeEEE
Confidence 577999999766 444444321 00 011456776 999999998764 588999
Q ss_pred EecCCCceEEE-EecccccceEeEEcCCCC-eEEEEecCCcEEEEcCCCCC
Q 023246 148 WKKKGGKLVRL-MVGDRHVVNQLEPHPHIP-MFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 148 wd~~~~~~~~~-~~~h~~~v~~~~~~p~~~-~l~t~~~d~~i~iwd~~~~~ 196 (285)
+| .+++.+.. +... . ++.+.|+++ .+++.+.||.+.+++. .++
T Consensus 153 iD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 153 VV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred EE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 99 99998877 6532 1 244556554 4677778999999999 554
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.99 E-value=4.8e-08 Score=79.05 Aligned_cols=225 Identities=11% Similarity=-0.011 Sum_probs=127.3
Q ss_pred EEEEcCCCCcEEEEee----------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 8 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
.++++|++ ..++++. .++.|.+||..+++....+..+.. .. .........+.|+|+|+++.
T Consensus 82 ~va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g------~r--~~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 82 NPVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDA------PR--FLVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC------CC--CCBSCCGGGEEECTTSSEEE
T ss_pred cEEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCc------cc--cccCCCCceEEEcCCCCEEE
Confidence 49999987 5554443 367899999998874332211100 00 00112345789999999766
Q ss_pred Ee--c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCC-C
Q 023246 78 SY--N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKG-G 153 (285)
Q Consensus 78 s~--~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~ 153 (285)
.+ . ++.|.++|+.+. +.+.++.... . ...+ +...+.+++.+.||.+.+.++.+ +
T Consensus 153 Van~~~~~~VsVID~~t~----------------~vv~tI~v~g----~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLEGK----------------AFKRMLDVPD----C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp EEECSSSCEEEEEETTTT----------------EEEEEEECCS----E-EEEE-EEETTEEEEEETTSCEEEEECCSSS
T ss_pred EEEcCCCCeEEEEECCCC----------------cEEEEEECCC----c-ceee-cCCCceeEEECCCCCEEEEECCCCC
Confidence 64 2 689999999987 5666664322 1 1222 44456677888899999999876 5
Q ss_pred ceEEEEeccc----ccce-EeEEc-CCCCeEEEEecCCcEEEEcCCCCCC---CCCC--C----------Ccccceeecc
Q 023246 154 KLVRLMVGDR----HVVN-QLEPH-PHIPMFATCGIEKTVKLWAPMPTDF---PPLP--D----------NAEKIMKANK 212 (285)
Q Consensus 154 ~~~~~~~~h~----~~v~-~~~~~-p~~~~l~t~~~d~~i~iwd~~~~~~---~~~~--~----------~~~~~~~~~~ 212 (285)
+.......+. .++. ..+|. ++|++++ .+.+|.|.+.|+.+... ..+. . .....+.+
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~-- 287 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY-- 287 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE--
T ss_pred eEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeE--
Confidence 5543222111 1221 24554 6775544 55589999999976642 1111 0 00011111
Q ss_pred ccCCCceEEEeC---------CCCeEEEEEecccccceeEeeeccccccCCCCCcC-eEEEeec
Q 023246 213 QGREDHSRITLT---------PDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEG-ETYLLGF 266 (285)
Q Consensus 213 ~~~~~~~~~~~s---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~ 266 (285)
.....+++++.. +...|.+.|+.+.+.+.++........+....++. ++|+...
T Consensus 288 ~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 288 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET
T ss_pred CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC
Confidence 112233444432 23679999999998888775444333344433332 3444443
No 219
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.98 E-value=1.3e-07 Score=72.63 Aligned_cols=194 Identities=9% Similarity=0.043 Sum_probs=125.5
Q ss_pred eeEEEEcCCCCcEEEEeeC--CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-e-cC
Q 023246 6 LNAIVIDPRNPNYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-Y-ND 81 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~-~d 81 (285)
...++|+|++ .++++.+. ++.|+++|+.+++....+.. .. ......+++. +..|.. . .+
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-------------~~-~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKM-------------DD-SYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEEC-------------CT-TCCEEEEEEE--TTEEEEEETTC
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEec-------------CC-CcceEEEEEe--CCEEEEEEecC
Confidence 4689999974 55555543 68999999999985432111 11 1122345554 444444 4 48
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.+.++|..+. +.+.++... .+. -..+ +++++.++.+..++.|.++|..+.+.+..+..
T Consensus 86 ~~v~viD~~t~----------------~v~~~i~~g-~~~-g~gl---t~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 86 NIGFIYDRRTL----------------SNIKNFTHQ-MKD-GWGL---ATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SEEEEEETTTT----------------EEEEEEECC-SSS-CCEE---EECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEECCCC----------------cEEEEEECC-CCC-eEEE---EECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 99999999877 567777543 111 2334 44666666666789999999999998888763
Q ss_pred cc-----ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCc-------------ccceeeccccCCCceEEE
Q 023246 162 DR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNA-------------EKIMKANKQGREDHSRIT 222 (285)
Q Consensus 162 h~-----~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 222 (285)
.. ..++.+.|. ++..++....++.|.+.|+.++++ ..+.-.. .....+.......+++++
T Consensus 145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 21 136678888 676566665678999999998874 2222110 112333333344678899
Q ss_pred eCCCCeEEEEEecccc
Q 023246 223 LTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 223 ~s~d~~i~vwd~~~~~ 238 (285)
+...+.|++.++....
T Consensus 224 gk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 224 GKLWPKLFEIKLHLVR 239 (266)
T ss_dssp ETTCSEEEEEEEEECC
T ss_pred CCCCCeEEEEEEeccc
Confidence 9999999999987753
No 220
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.95 E-value=6.5e-07 Score=69.25 Aligned_cols=202 Identities=7% Similarity=-0.030 Sum_probs=120.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
...+++|+|+++.++++-...+.|..+++...... .+..........+++++++. ++++. ..+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---------------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~ 101 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT---------------TIIRQDLGSPEGIALDHLGRTIFWTDSQLD 101 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE---------------EEECTTCCCEEEEEEETTTTEEEEEETTTT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE---------------EEEECCCCCccEEEEEecCCeEEEEECCCC
Confidence 34689999976566666667889999998754311 11111124678999999765 44443 478
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC---CCeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD---CGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~ 159 (285)
.|.+++.... ....+.... ......+++ ++++..++.+.. .+.|..+++.. +....+
T Consensus 102 ~I~~~~~~g~-----------------~~~~~~~~~-~~~P~~i~v-d~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~ 161 (267)
T 1npe_A 102 RIEVAKMDGT-----------------QRRVLFDTG-LVNPRGIVT-DPVRGNLYWTDWNRDNPKIETSHMDG-TNRRIL 161 (267)
T ss_dssp EEEEEETTSC-----------------SCEEEECSS-CSSEEEEEE-ETTTTEEEEEECCSSSCEEEEEETTS-CCCEEE
T ss_pred EEEEEEcCCC-----------------CEEEEEECC-CCCccEEEE-eeCCCEEEEEECCCCCcEEEEEecCC-CCcEEE
Confidence 8999998643 222222111 112678887 886555444332 47888888763 333333
Q ss_pred e-cccccceEeEEcCCCCeE-EEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 160 V-GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 160 ~-~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
. ........++++|++..| ++-...+.|..+++.+.....+.........+. ...+.++++-...+.|.++|..++
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~--~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVT--SYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEE--EETTEEEEEETTTTEEEEEETTTT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEE--EeCCEEEEEECCCCeEEEEeCCCC
Confidence 2 223467889999987765 444456789999987543221110111111221 123446666667788999988777
Q ss_pred ccceeE
Q 023246 238 QTLAYR 243 (285)
Q Consensus 238 ~~~~~~ 243 (285)
+.+..+
T Consensus 240 ~~~~~i 245 (267)
T 1npe_A 240 KEMDTF 245 (267)
T ss_dssp EEEEEE
T ss_pred CceEEE
Confidence 665554
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=1.5e-07 Score=77.38 Aligned_cols=174 Identities=7% Similarity=-0.068 Sum_probs=104.8
Q ss_pred CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-----------cCCcEEEEEcCCCCC
Q 023246 26 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-----------NDELVYLFEKNMGLG 94 (285)
Q Consensus 26 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-----------~d~~i~iwd~~~~~~ 94 (285)
+.|.++|..+++.+.. +..+ ..+ .+.++|+|++|..+ .++.|.++|..+.
T Consensus 99 ~~VsVID~~t~~vv~~--------------I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-- 159 (426)
T 3c75_H 99 TQQFVIDGSTGRILGM--------------TDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-- 159 (426)
T ss_dssp EEEEEEETTTTEEEEE--------------EEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--
T ss_pred CeEEEEECCCCEEEEE--------------EECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--
Confidence 7999999998874322 2112 123 79999999866553 2578999999887
Q ss_pred CCCCCCCCccccCCCCceEeecc--cC---ceeeeeEEEecCCCcEEEEecC--CCeEEEEecCCCceEEEEecccccce
Q 023246 95 PSPLSLSPEDLQKREEPQVYSGH--RN---SQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLMVGDRHVVN 167 (285)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~i~~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~h~~~v~ 167 (285)
+.+..+... .. ......+.+ +|++++++.+.. ++.|.+.|+.+++.+.++.....
T Consensus 160 --------------~vv~~I~v~g~~r~~~g~~P~~~~~-spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--- 221 (426)
T 3c75_H 160 --------------LPIADIELPDAPRFLVGTYQWMNAL-TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--- 221 (426)
T ss_dssp --------------CEEEEEEETTCCCCCBSCCGGGSEE-CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---
T ss_pred --------------cEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---
Confidence 565555421 00 011456776 999999988764 68899999999999888764221
Q ss_pred EeEEcCCC-CeEEEEecCCcEEEEcCCCCCCC-----CCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 168 QLEPHPHI-PMFATCGIEKTVKLWAPMPTDFP-----PLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 168 ~~~~~p~~-~~l~t~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
....|++ +.+++.+.||.+.+.+...+++. .+.....++........+...++..+..+.+.+.|+...
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 2233433 34556666777766666444332 111111111111111223333344456789999998654
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=9.4e-08 Score=84.31 Aligned_cols=198 Identities=8% Similarity=-0.019 Sum_probs=116.9
Q ss_pred eEEEEcCCCCcEEEEeeCCC-------------cEEEEEccCCcccCCcCCCCCcccccccccCCC-CCcceEEEEEecC
Q 023246 7 NAIVIDPRNPNYFAVGGSDE-------------YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGK-NNIHITGLAYSNT 72 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg-------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~i~~s~~ 72 (285)
..++|+ |+ ..|+.++.+. .|++|++.++..... .+... .. |...+..+.|+|+
T Consensus 178 ~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~----------~v~~~-~~~~~~~~~~~~~SpD 244 (693)
T 3iuj_A 178 SGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR----------LVFGA-IPAQHHRYVGATVTED 244 (693)
T ss_dssp CCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE----------EEESC-SGGGCCSEEEEEECTT
T ss_pred ccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccce----------EEEec-CCCCCeEEEEEEEcCC
Confidence 568899 87 6677776664 388999877642100 11111 22 4445788999999
Q ss_pred CCEEEE-ec----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCc-EEEEecCC---C
Q 023246 73 SELLIS-YN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDE-YVMSGSDC---G 143 (285)
Q Consensus 73 ~~~l~s-~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~d---g 143 (285)
|++|+. .. ...|+++|+.++. .....+..+... .... + ++++. +++....+ +
T Consensus 245 g~~l~~~~~~~~~~~~i~~~d~~~~~---------------~~~~~l~~~~~~--~~~~-~-~~~g~~l~~~t~~~~~~~ 305 (693)
T 3iuj_A 245 DRFLLISAANSTSGNRLYVKDLSQEN---------------APLLTVQGDLDA--DVSL-V-DNKGSTLYLLTNRDAPNR 305 (693)
T ss_dssp SCEEEEEEESSSSCCEEEEEETTSTT---------------CCCEEEECSSSS--CEEE-E-EEETTEEEEEECTTCTTC
T ss_pred CCEEEEEEccCCCCcEEEEEECCCCC---------------CceEEEeCCCCc--eEEE-E-eccCCEEEEEECCCCCCC
Confidence 997654 22 3589999987651 244555555543 3333 3 44444 44454443 6
Q ss_pred eEEEEecCCCce--EEEEecccccceEeEEcCCCCeEEEEec-CC--cEEEEcCCCCCCCCCCC-CcccceeeccccCCC
Q 023246 144 HLFIWKKKGGKL--VRLMVGDRHVVNQLEPHPHIPMFATCGI-EK--TVKLWAPMPTDFPPLPD-NAEKIMKANKQGRED 217 (285)
Q Consensus 144 ~v~vwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~t~~~-d~--~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~ 217 (285)
.|..+++.++.. ...+..|...+. .|+|++++|+.... ++ .|++|++.++....+.. ....+..........
T Consensus 306 ~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 306 RLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCS
T ss_pred EEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCC
Confidence 899999987654 345555665554 88999998776654 44 68999988665433321 112222222222233
Q ss_pred ceEEEeCC---CCeEEEEEecccc
Q 023246 218 HSRITLTP---DVIMHVLRLQRRQ 238 (285)
Q Consensus 218 ~~~~~~s~---d~~i~vwd~~~~~ 238 (285)
.++++.+. -+.++.||+.+++
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEEecCCCCCCEEEEEECCCCe
Confidence 34444333 2789999887654
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=4.4e-08 Score=78.86 Aligned_cols=213 Identities=12% Similarity=0.081 Sum_probs=116.5
Q ss_pred cceeEEEEcCCCCcEEEEeeC-----CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEE
Q 023246 4 IRLNAIVIDPRNPNYFAVGGS-----DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLI 77 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~ 77 (285)
..+.++++++++ +++++-.. ++.|.+||+.+++....+..+.. ...+...+..+++++++ ..++
T Consensus 67 ~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~---------~~~~~~~~~~v~vd~~~g~~yv 136 (343)
T 2qe8_A 67 DTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP---------ITLSNSFVNDLAVDLIHNFVYI 136 (343)
T ss_dssp SCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT---------TSCTTCCCCEEEEETTTTEEEE
T ss_pred eEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh---------hcccccccceEEEecCCCEEEE
Confidence 467899999975 66665443 57899999998874332221110 01233456899999864 4445
Q ss_pred E-e---cCCcEEEEEcCCCCCCC--CC--CCCCcc---ccCCCCceEeeccc----CceeeeeEEEecCCCcEEEEecCC
Q 023246 78 S-Y---NDELVYLFEKNMGLGPS--PL--SLSPED---LQKREEPQVYSGHR----NSQTVKGVNFFGPNDEYVMSGSDC 142 (285)
Q Consensus 78 s-~---~d~~i~iwd~~~~~~~~--~~--~~~~~~---~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~d 142 (285)
+ . .++.|.+||..++.... .. ...... ......+....... -...+..+++ +|+++.|+.+...
T Consensus 137 td~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~-s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 137 SDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVL-DAENEWLYLSPMH 215 (343)
T ss_dssp EECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEE-CTTSCEEEEEESS
T ss_pred EcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEe-ccCCCEEEEEeCC
Confidence 5 3 47889999987652000 00 000000 00000000000000 0012678997 9999888776655
Q ss_pred C-eEEEEecC---CCce-----EE--EEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeec
Q 023246 143 G-HLFIWKKK---GGKL-----VR--LMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKAN 211 (285)
Q Consensus 143 g-~v~vwd~~---~~~~-----~~--~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 211 (285)
+ .++.++.. .+.. .. ...++.+....+++++++.++++...++.|.+||...+++..+. ..
T Consensus 216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~-------~~- 287 (343)
T 2qe8_A 216 STSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLV-------TD- 287 (343)
T ss_dssp CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEE-------EC-
T ss_pred CCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEE-------EC-
Confidence 4 66666532 1110 00 11234456778999999999888888999999998443321111 00
Q ss_pred cccCCCceEEEeCCCCeEEEEEecc
Q 023246 212 KQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 212 ~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
. ......-++.+.++.+++-+.+.
T Consensus 288 ~-~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 288 E-KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp G-GGSCEEEEEECTTSCEEEEECCG
T ss_pred C-ceecCCeeEECCCCcEEEEeCcc
Confidence 0 00011334556678777776544
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=1.8e-09 Score=87.92 Aligned_cols=145 Identities=9% Similarity=-0.021 Sum_probs=78.9
Q ss_pred CCCEEEE-ecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEec
Q 023246 72 TSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKK 150 (285)
Q Consensus 72 ~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 150 (285)
++..+++ +.|+.|+.||..++ +.+..+.. .. +.+..+ ..++..+++++.||.|+.||.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG----------------~~~W~~~~--~~--~~s~p~-~~~g~~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG----------------SIKWTLKE--DP--VLQVPT-HVEEPAFLPDPNDGSLYTLGS 66 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC----------------CEEEEEEC--CC--SCCCC------CCEEECTTTCCEEEC--
T ss_pred eCCEEEEEcCCCEEEEEECCCC----------------CEEEEecC--CC--ceecce-EcCCCEEEEeCCCCEEEEEEC
Confidence 3445555 56999999999988 56666655 22 444433 456777888889999999999
Q ss_pred CCCceEEEEecccc-cce-EeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCCcccceeeccccCCCceEEEeCCCC
Q 023246 151 KGGKLVRLMVGDRH-VVN-QLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDNAEKIMKANKQGREDHSRITLTPDV 227 (285)
Q Consensus 151 ~~~~~~~~~~~h~~-~v~-~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~ 227 (285)
.+++.+..+..+.. .+. +..+. .+..+++++.|+.|+.||+++++. ..+..+.. . . ..+.+..+++++.++
T Consensus 67 ~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~---~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 67 KNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-S---LSPSTSLLYLGRTEY 140 (369)
T ss_dssp ---CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEE
T ss_pred CCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-c---ccccCCEEEEEecCC
Confidence 99988776654322 111 11111 345677888899999999988764 33322221 1 1 112455788888999
Q ss_pred eEEEEEecccccceeE
Q 023246 228 IMHVLRLQRRQTLAYR 243 (285)
Q Consensus 228 ~i~vwd~~~~~~~~~~ 243 (285)
.|+.||.++++.+-..
T Consensus 141 ~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 141 TITMYDTKTRELRWNA 156 (369)
T ss_dssp EEECCCSSSSSCCCEE
T ss_pred EEEEEECCCCCEEEeE
Confidence 9999999888765444
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.86 E-value=2e-07 Score=73.67 Aligned_cols=159 Identities=10% Similarity=0.039 Sum_probs=98.5
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE----e
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS----Y 79 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s----~ 79 (285)
..+.++++++++ +++++...++.|.+|+.. ++.... . ..........+..++++++|+++++ +
T Consensus 86 ~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~~----------~-~~~~~~~~~~~~~i~~d~dG~l~~td~~~g 152 (305)
T 3dr2_A 86 AFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHLL----------V-GRYAGKRLNSPNDLIVARDGAIWFTDPPFG 152 (305)
T ss_dssp SCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEE----------E-CEETTEECSCCCCEEECTTSCEEEECCSGG
T ss_pred CccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEEE----------E-eccCCCccCCCCCEEECCCCCEEEeCcCCC
Confidence 457789999986 677666666889999875 432100 0 0000111234678999999998885 2
Q ss_pred c--------------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC---
Q 023246 80 N--------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC--- 142 (285)
Q Consensus 80 ~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--- 142 (285)
. .+.|+.||..++ .+..+. .... ...++| +|+++.++.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~v~~~d~~~g-----------------~~~~~~-~~~~--p~gl~~-spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 153 LRKPSQGCPADPELAHHSVYRLPPDGS-----------------PLQRMA-DLDH--PNGLAF-SPDEQTLYVSQTPEQG 211 (305)
T ss_dssp GSCGGGSCCCCCSSSCEEEEEECSSSC-----------------CCEEEE-EESS--EEEEEE-CTTSSEEEEEECCC--
T ss_pred ccccccccccccccCCCeEEEEcCCCC-----------------cEEEEe-cCCC--CcceEE-cCCCCEEEEEecCCcC
Confidence 1 245777776554 222232 2222 678887 9999977766554
Q ss_pred ---CeEEEEecCCCceE--EEE-ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCC
Q 023246 143 ---GHLFIWKKKGGKLV--RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP 198 (285)
Q Consensus 143 ---g~v~vwd~~~~~~~--~~~-~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~ 198 (285)
+.|++|++..+... ..+ ....+.+..++++++|++.++. .+ .|.+|++.+..+.
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~g~~~~ 271 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSDGQLLG 271 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTTSCEEE
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCCCCEEE
Confidence 78999998755411 111 1123456789999999965444 44 4999998655443
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.84 E-value=3.1e-07 Score=75.16 Aligned_cols=157 Identities=11% Similarity=0.120 Sum_probs=98.4
Q ss_pred CCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCC-CcceEEEEEecCCCEEEEe-cC------CcE
Q 023246 13 PRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKN-NIHITGLAYSNTSELLISY-ND------ELV 84 (285)
Q Consensus 13 ~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~i~~s~~~~~l~s~-~d------~~i 84 (285)
++...+++.|..++.|.++|+.+.... .+.+....+..+.... ......+..+|+| +++++ .+ +.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-----p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-----PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-----CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-----ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 666567777888999999999755210 0001111101110011 1245567888999 66653 23 689
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCce-eeeeEEEecCCCcEEEEec-------------------CCCe
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQ-TVKGVNFFGPNDEYVMSGS-------------------DCGH 144 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~~-------------------~dg~ 144 (285)
.++|..+. +.+.++.....+. .-..+-| +|+++.+++.. ....
T Consensus 167 ~vlD~~T~----------------~v~~~~~~~~~~~~~~Yd~~~-~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 167 LMLDHYSF----------------EPLGKWEIDRGDQYLAYDFWW-NLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp EEECTTTC----------------CEEEECCSBCTTCCCCCCEEE-ETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred EEEECCCC----------------eEEEEEccCCCCccccceEEE-CCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 99999877 5666665332221 1344654 89999888874 4789
Q ss_pred EEEEecCCCceEEEEecc--cccceEeEE--cCCCCeEEEEe------cCCcEEEEcC
Q 023246 145 LFIWKKKGGKLVRLMVGD--RHVVNQLEP--HPHIPMFATCG------IEKTVKLWAP 192 (285)
Q Consensus 145 v~vwd~~~~~~~~~~~~h--~~~v~~~~~--~p~~~~l~t~~------~d~~i~iwd~ 192 (285)
|.+||+.+++.+.++..- ......+.| +|+++++..++ .+++|.+|..
T Consensus 230 V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 230 IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 999999998888877642 133445555 99999955554 5668876554
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.84 E-value=1.1e-07 Score=78.14 Aligned_cols=229 Identities=10% Similarity=0.022 Sum_probs=128.1
Q ss_pred EEEEcCCCCcEEEEee----------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 8 AIVIDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
.++++|++ ..++++. .++.|.++|..+++....+..... .. .........+.|+|+|+++.
T Consensus 122 gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~------~r--~~~g~~P~~~~~spDGk~ly 192 (426)
T 3c75_H 122 HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDA------PR--FLVGTYQWMNALTPDNKNLL 192 (426)
T ss_dssp EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTC------CC--CCBSCCGGGSEECTTSSEEE
T ss_pred ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCc------cc--cccCCCcceEEEcCCCCEEE
Confidence 79999987 5555544 467999999998875433221100 00 00012344689999999777
Q ss_pred Eec---CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 78 SYN---DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 78 s~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
.++ ++.|.+.|+.+. +.+.++.... ...+ + ....+.+++.+.||.+.+.++.+++
T Consensus 193 V~n~~~~~~VsVID~~t~----------------kvv~~I~v~g----~~~~-~-p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 193 FYQFSPAPAVGVVDLEGK----------------TFDRMLDVPD----CYHI-F-PASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp EEECSSSCEEEEEETTTT----------------EEEEEEECCS----EEEE-E-EEETTEEEEEETTSSEEEEECCTTC
T ss_pred EEecCCCCeEEEEECCCC----------------eEEEEEEcCC----ceee-c-cCCCcEEEEEcCCCCEEEEECCCCc
Confidence 643 578999999887 5656655322 1111 1 1123556666778888888886666
Q ss_pred eEEEE----ecccccc-eEeEEcCCCCeEEEEecCCcEEEEcCCCCCC---CCCCC---C-------cccceeeccccCC
Q 023246 155 LVRLM----VGDRHVV-NQLEPHPHIPMFATCGIEKTVKLWAPMPTDF---PPLPD---N-------AEKIMKANKQGRE 216 (285)
Q Consensus 155 ~~~~~----~~h~~~v-~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~---~~~~~---~-------~~~~~~~~~~~~~ 216 (285)
..... .....++ ..+.+.+++..++.....+.+.+.|...... ..+.. . ......+ ....+
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v-a~s~d 329 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQT-AYHRQ 329 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCE-EEEGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceee-EEcCC
Confidence 55322 1111121 2356789888877777789999999865432 11100 0 0000001 11222
Q ss_pred -CceEEEeC---------CCCeEEEEEecccccceeEeeeccccccCCCCCcC-eEEEeecCC
Q 023246 217 -DHSRITLT---------PDVIMHVLRLQRRQTLAYRERRYNAADFESDEEEG-ETYLLGFSD 268 (285)
Q Consensus 217 -~~~~~~~s---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 268 (285)
.+++++.. .++.|.+.|..+.+.+..+........+....+.. .+|+....+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTT
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCC
Confidence 33444432 24689999999988887774433333333333333 344444333
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.80 E-value=4.2e-07 Score=72.39 Aligned_cols=180 Identities=8% Similarity=0.012 Sum_probs=107.8
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 96 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~ 96 (285)
..+..++.++.|..+|.. ++..... ..+...+.++...+++.+++.+.++.|..+|.. +
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~---------------~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g---- 166 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRF---------------KTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-G---- 166 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEE---------------ECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-S----
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEE---------------cCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-C----
Confidence 355566667777777766 4421110 111223445566667777666667889999887 5
Q ss_pred CCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCC
Q 023246 97 PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIP 176 (285)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 176 (285)
+....+...... +.++.. ++++...+.. +.|..+| .+++.+.........+.++...+++.
T Consensus 167 ------------~~~~~~~~~~~~--~~~~~~-d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 167 ------------TEKWRFKTNDAI--TSAASI-GKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp ------------CEEEEEECSSCC--CSCCEE-CTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC
T ss_pred ------------CEeEEEecCCCc--eeeeEE-cCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe
Confidence 344444433322 666665 6777765544 8899999 77888877766667788899988875
Q ss_pred eEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccccc
Q 023246 177 MFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 177 ~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
. ..++.++.+..++..+..+..+.......... ....+..+..++.++.|..+|. +++..
T Consensus 228 l-~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~--~~~~~g~l~v~t~~ggl~~~d~-~g~~~ 287 (330)
T 3hxj_A 228 I-YVTSLDGHLYAINPDGTEKWRFKTGKRIESSP--VIGNTDTIYFGSYDGHLYAINP-DGTEK 287 (330)
T ss_dssp E-EEEETTTEEEEECTTSCEEEEEECSSCCCSCC--EECTTSCEEEECTTCEEEEECT-TSCEE
T ss_pred E-EEEcCCCeEEEECCCCCEeEEeeCCCCccccc--eEcCCCeEEEecCCCCEEEECC-CCcEE
Confidence 4 44556777888886544332222111111111 1122346777888888999984 44433
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.71 E-value=1.4e-05 Score=61.62 Aligned_cols=158 Identities=11% Similarity=-0.014 Sum_probs=93.4
Q ss_pred cceEEEEEecCCCE-EEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC-cEEEE
Q 023246 62 IHITGLAYSNTSEL-LISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVMS 138 (285)
Q Consensus 62 ~~v~~i~~s~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~ 138 (285)
..+..++|++++.. +++. ..+.|..++.... .....+..... ....+++ ++++ ...++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~----------------~~~~~~~~~~~--~p~~ia~-d~~~~~lyv~ 96 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG----------------EPTTIIRQDLG--SPEGIAL-DHLGRTIFWT 96 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSC----------------CCEEEECTTCC--CEEEEEE-ETTTTEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCC----------------CcEEEEECCCC--CccEEEE-EecCCeEEEE
Confidence 35679999997654 4443 4789999998754 22222222112 2678887 7764 45556
Q ss_pred ecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEec---CCcEEEEcCCCCCCCCCC-CCcccceeecccc
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGI---EKTVKLWAPMPTDFPPLP-DNAEKIMKANKQG 214 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~---d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 214 (285)
-...+.|.++++..................++++|++..|..+.. .+.|..+++.......+. ........+....
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC
Confidence 566789999998744332222222246789999997665444443 368888887654332221 1111122222212
Q ss_pred CCCceEEEeCCCCeEEEEEecccc
Q 023246 215 REDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 215 ~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
....++++-...+.|.++++....
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCCEEEEEECCCCEEEEEecCCCc
Confidence 234566777778899999987543
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.70 E-value=2.4e-05 Score=64.13 Aligned_cols=156 Identities=8% Similarity=0.072 Sum_probs=103.5
Q ss_pred EEEEcCCCCcEEEEeeCC------CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-
Q 023246 8 AIVIDPRNPNYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN- 80 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~- 80 (285)
.+...|++ ++++...+ |.|.++|..+.+....+..+.. -..--..+.|+|+++.+++++
T Consensus 142 ~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~------------~~~~~Yd~~~~p~~~~mvsS~w 207 (462)
T 2ece_A 142 TVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRG------------DQYLAYDFWWNLPNEVLVSSEW 207 (462)
T ss_dssp EEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCT------------TCCCCCCEEEETTTTEEEECBC
T ss_pred ceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCC------------CccccceEEECCCCCEEEEccC
Confidence 46778975 66666555 7899999998886544432211 111233578899999888764
Q ss_pred -------------------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEE-ecCCCcEEEEec
Q 023246 81 -------------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF-FGPNDEYVMSGS 140 (285)
Q Consensus 81 -------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~~ 140 (285)
+.+|.+||+.+. +.+.++...........+.| ++|++++++.++
T Consensus 208 g~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~----------------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 208 AVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR----------------KRIHSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp CCHHHHTTCCCTTTHHHHSCCEEEEEETTTT----------------EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred cCccccccccchhhhhhccCCEEEEEECCCC----------------cEeeEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 789999999876 56666665321122445544 489999887766
Q ss_pred ------CCCeEEEEecCCCce--EEEE--ecc----------------cccceEeEEcCCCCeEEEEe-cCCcEEEEcCC
Q 023246 141 ------DCGHLFIWKKKGGKL--VRLM--VGD----------------RHVVNQLEPHPHIPMFATCG-IEKTVKLWAPM 193 (285)
Q Consensus 141 ------~dg~v~vwd~~~~~~--~~~~--~~h----------------~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~ 193 (285)
.+++|.+|....++. ...+ ... ...+..+.++|++++|..+. ..+.|.++|+.
T Consensus 272 e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred eeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 567888877665432 1111 110 13578899999999976665 46899999985
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.68 E-value=4.7e-06 Score=67.75 Aligned_cols=195 Identities=10% Similarity=0.035 Sum_probs=110.6
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 96 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~ 96 (285)
..+++++.++.|..+|..+++............ ........+.+.-...++.+++.+.++.|..+|..++
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG---- 123 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDG------WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDG---- 123 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---------CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTC----
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccc------cccccCcccccCceEeCCEEEEEcCCCEEEEEECCCC----
Confidence 577788889999999999887543322111000 0000012233322233455566567899999999887
Q ss_pred CCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecccccc-----eEeEE
Q 023246 97 PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVV-----NQLEP 171 (285)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v-----~~~~~ 171 (285)
+.+..+...... ...... . +..++.++.++.|+.+|..+++.+.......... .....
T Consensus 124 ------------~~~W~~~~~~~~--~~~p~~-~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 124 ------------TVAWQTKVAGEA--LSRPVV-S--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp ------------CEEEEEECSSCC--CSCCEE-E--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred ------------CEEEEEeCCCce--EcCCEE-E--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 444444433221 122222 2 4477778889999999999999988776432211 22222
Q ss_pred cCCCCeEEEEecCCcEEEEcCCCCCCC-CCCCCc--c-----cceeeccc-cCCCceEEEeCCCCeEEEEEecccccc
Q 023246 172 HPHIPMFATCGIEKTVKLWAPMPTDFP-PLPDNA--E-----KIMKANKQ-GREDHSRITLTPDVIMHVLRLQRRQTL 240 (285)
Q Consensus 172 ~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~~--~-----~~~~~~~~-~~~~~~~~~~s~d~~i~vwd~~~~~~~ 240 (285)
. +..++.+..++.+..+|+.+++.. ...... . .+...... ...+..++.++.++.+..+|..+++.+
T Consensus 187 ~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 187 A--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM 262 (376)
T ss_dssp E--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE
T ss_pred E--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE
Confidence 2 346777888899999999877631 111000 0 00000000 012346677778889999998777654
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.65 E-value=5e-06 Score=63.76 Aligned_cols=161 Identities=8% Similarity=0.005 Sum_probs=106.6
Q ss_pred ceEEEEEecCCCEEEEe-c--CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEe
Q 023246 63 HITGLAYSNTSELLISY-N--DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG 139 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 139 (285)
....+.|++++.++++. . ++.|.++|+.++ +.+..+..... .....+++ . .++..++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg----------------~v~~~i~l~~~-~fgeGi~~-~-g~~lyv~t 82 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG----------------KVENIHKMDDS-YFGEGLTL-L-NEKLYQVV 82 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC----------------CEEEEEECCTT-CCEEEEEE-E-TTEEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC----------------CEEEEEecCCC-cceEEEEE-e-CCEEEEEE
Confidence 36799999987766663 3 689999999988 56666543222 11345654 3 33555666
Q ss_pred cCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCCC--ccc---ceeeccc
Q 023246 140 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPDN--AEK---IMKANKQ 213 (285)
Q Consensus 140 ~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~~--~~~---~~~~~~~ 213 (285)
-.++.+.++|..+.+.+.++..... ....++++++.++.+..++.|.++|+.+.++ ..+... ..+ +..+.+.
T Consensus 83 ~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 83 WLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred ecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 6789999999999999988864311 2344666888776666788999999988663 222211 111 1122222
Q ss_pred cCCCceEEEeCCCCeEEEEEecccccceeEeee
Q 023246 214 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERR 246 (285)
Q Consensus 214 ~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~ 246 (285)
++..++....++.|.+.|..+++.+..+...
T Consensus 161 --dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 161 --NGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp --TTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred --CCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 3455666667889999999998887777543
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.65 E-value=1e-06 Score=71.23 Aligned_cols=101 Identities=6% Similarity=-0.219 Sum_probs=65.5
Q ss_pred cEEEEeeCCC----cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec-----------C
Q 023246 17 NYFAVGGSDE----YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN-----------D 81 (285)
Q Consensus 17 ~~l~tg~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~-----------d 81 (285)
..+++-..++ +|.++|..+++.+ ..+..+.. + .+.++|+++++..++ +
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~--------------~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~ 95 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTL--------------GHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEE--------------EEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEE--------------EEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCC
Confidence 3455555455 7889999988743 22222222 3 799999998666643 6
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC-----ceeeeeEEEecCCCcEEEEecC--CCeEEE--EecC
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN-----SQTVKGVNFFGPNDEYVMSGSD--CGHLFI--WKKK 151 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~~~~~--dg~v~v--wd~~ 151 (285)
+.|.+||..+. +.+.++..... ......+.+ +|++++++.+.. ...|.+ +|+.
T Consensus 96 ~~VsviD~~T~----------------~vv~~I~v~~~~~~~~g~~P~~ia~-SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 96 DYVEVFDPVTF----------------LPIADIELPDAPRFSVGPRVHIIGN-CASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EEEEEECTTTC----------------CEEEEEEETTSCSCCBSCCTTSEEE-CTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CEEEEEECCCC----------------CEEEEEECCCccccccCCCcceEEE-cCCCCEEEEEccCCCCeEEEEEEchh
Confidence 88999999987 56666653210 011456776 888888877753 456777 7763
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.64 E-value=6.5e-06 Score=62.57 Aligned_cols=150 Identities=15% Similarity=0.139 Sum_probs=102.1
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE--ecCCc
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS--YNDEL 83 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s--~~d~~ 83 (285)
...+.|+. ..++.+.+.+|.|+++|+.+++..... + .. ......+++ .+..|.. -.++.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-------------l-~~-~~FgeGit~--~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-------------R-LG-NIFAEGLAS--DGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-------------E-CT-TCCEEEEEE--CSSCEEEEESSSCE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-------------C-CC-CcceeEEEE--eCCEEEEEEccCCE
Confidence 45677875 378888888999999999999853221 1 11 111123444 4443333 35999
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecc-
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGD- 162 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h- 162 (285)
+.+||..+. +.+.++..... -..+++ +++.|+.+..++.|.++|..+.+.+..+...
T Consensus 118 v~V~D~~Tl----------------~~~~ti~~~~e---GwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 118 LFTWSGMPP----------------QRERTTRYSGE---GWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp EEEEETTTT----------------EEEEEEECSSC---CCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEECCcC----------------cEEEEEeCCCc---eeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 999999887 67777775332 245553 4666666667999999999999998887642
Q ss_pred -cc---cceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 163 -RH---VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 163 -~~---~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
.. .++.+.|. +|+.++..-.+..|.+.|++++++
T Consensus 176 ~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 176 RGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred CCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 22 34667777 676666665678999999988874
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.62 E-value=9.4e-06 Score=61.67 Aligned_cols=151 Identities=14% Similarity=0.155 Sum_probs=100.8
Q ss_pred eeEEEEcCCCCcEEEEeeCCC--cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE--ecC
Q 023246 6 LNAIVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS--YND 81 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s--~~d 81 (285)
...+.|+ ++ .++.+.+.+| .|+++|+.+++....... ..........+.+..|.. -.+
T Consensus 45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l----------------~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIEL----------------GKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEEC----------------CTTCCEEEEEEETTEEEEEESSS
T ss_pred cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEec----------------CCccceeEEEEeCCEEEEEEeeC
Confidence 4568888 44 7777777766 899999999985433211 112222222333444443 349
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+.+.+||..+. +.+.++..... -..++ ++++.|+....++.|.++|..+.+.+..+..
T Consensus 107 ~~v~v~D~~t~----------------~~~~ti~~~~e---G~glt---~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 107 GLGFVWNIRNL----------------RQVRSFNYDGE---GWGLT---HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp SEEEEEETTTC----------------CEEEEEECSSC---CCCEE---ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred CEEEEEECccC----------------cEEEEEECCCC---ceEEe---cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 99999999887 67777775432 23454 3566666666688999999999999888764
Q ss_pred c--c---ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 162 D--R---HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 162 h--~---~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
. . ..++.+.|. +|+..+..-.+..|.+.|++++++
T Consensus 165 ~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 165 TAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred ccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence 2 2 234557776 676666665788999999988874
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.61 E-value=8.2e-06 Score=69.16 Aligned_cols=186 Identities=10% Similarity=0.011 Sum_probs=115.2
Q ss_pred CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEE-e-cCCCEEEEec-----------
Q 023246 14 RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-S-NTSELLISYN----------- 80 (285)
Q Consensus 14 ~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-s-~~~~~l~s~~----------- 80 (285)
|+..++++...++.|.+.|+.+.++...+ .+ .....+..+++ + |+++++.++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii------------~i--p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~ 165 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL------------EI--PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 165 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE------------EC--SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE------------eC--CCCCCCcceeeeecCCCcEEEEecccccccCCCCc
Confidence 65445555555677999999988743211 11 11234667787 4 8888776652
Q ss_pred --------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCC---------
Q 023246 81 --------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCG--------- 143 (285)
Q Consensus 81 --------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--------- 143 (285)
++.+.+.|..+. +...++.-..+ ...+++ +++++++++.+.+.
T Consensus 166 ~l~~~~~~~~~vtvID~~t~----------------~v~~qI~Vgg~---pd~~~~-spdGk~~~vt~~~se~~~~i~~~ 225 (595)
T 1fwx_A 166 NMEDVANYVNVFTAVDADKW----------------EVAWQVLVSGN---LDNCDA-DYEGKWAFSTSYNSEKGMTLPEM 225 (595)
T ss_dssp STTCGGGEEEEEEEEETTTT----------------EEEEEEEESSC---CCCEEE-CSSSSEEEEEESCTTCCSSHHHH
T ss_pred ccccccccCceEEEEECCCC----------------eEEEEEEeCCC---ccceEE-CCCCCEEEEEecCcccCcchhhc
Confidence 457889998766 45555443222 344665 88888887776432
Q ss_pred -----------------------------eEEEEecCC--Cce-EEEEecccccceEeEEcCCCCeEEEE-ecCCcEEEE
Q 023246 144 -----------------------------HLFIWKKKG--GKL-VRLMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLW 190 (285)
Q Consensus 144 -----------------------------~v~vwd~~~--~~~-~~~~~~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iw 190 (285)
.|.+.|..+ ++. +..+.. .....++.++|||++++.+ ..+.+|.++
T Consensus 226 ~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVi 304 (595)
T 1fwx_A 226 TAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVL 304 (595)
T ss_dssp TCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEE
T ss_pred cccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEE
Confidence 377777776 444 555543 2356789999999985544 478899999
Q ss_pred cCCCCC------C-------CCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 191 APMPTD------F-------PPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 191 d~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
|+...+ + .+.... ....-... ..++...++.--|++|.+||+..
T Consensus 305 d~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF-~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 305 DVTRFDAVFYENADPRSAVVAEPELG-LGPLHTAF-DGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEEE-CTTSEEEEEETTTTEEEEEEHHH
T ss_pred ECcccccccccccCcccceEEEcCCC-CCcceEEE-CCCCeEEEEEecCCcEEEEEhhH
Confidence 987431 1 111111 11112211 22335566778889999999987
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.60 E-value=3.3e-06 Score=74.33 Aligned_cols=201 Identities=11% Similarity=0.056 Sum_probs=115.9
Q ss_pred CCcEEEEEccCCcccCCcCCC--CCccccccc------ccCC--------CCCcceEEEEEecCCCEEEEec-CC-----
Q 023246 25 DEYARVYDIRKCHWYSPISSD--TPVDTFCPR------HLIG--------KNNIHITGLAYSNTSELLISYN-DE----- 82 (285)
Q Consensus 25 dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~------~~~~--------~h~~~v~~i~~s~~~~~l~s~~-d~----- 82 (285)
+|.|..||..+++.+...... .+...+... .... ++......++++|++.+++.+. ++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 789999999999865443210 111000000 0000 1111123578888887776653 54
Q ss_pred --------------cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc-------eeeeeEEEecCCCc---EEEE
Q 023246 83 --------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGVNFFGPNDE---YVMS 138 (285)
Q Consensus 83 --------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~~ 138 (285)
.|..+|..++ +.+-.++..... ....-... ..+++ .++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG----------------~~~W~~~~~~~d~wd~~~~~~~~l~d~-~~~G~~~~~v~~ 324 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTG----------------EYVWHYQTTPGDAWDYTATQHMILAEL-PIDGKPRKVLMQ 324 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTC----------------CEEEEEESSTTCCSCCCCCSCEEEEEE-EETTEEEEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEEccCC----------------ceeEeeecCCcccccccCCCCcEEEee-ccCCcEEEEEEE
Confidence 3999999988 555555432110 00111111 22454 7889
Q ss_pred ecCCCeEEEEecCCCceEEEEeccc-c--------------------------------------cceEeEEcCCCCeEE
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMVGDR-H--------------------------------------VVNQLEPHPHIPMFA 179 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~~h~-~--------------------------------------~v~~~~~~p~~~~l~ 179 (285)
++.+|.++++|.++|+.+....... . .-..++++|+..+++
T Consensus 325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~y 404 (689)
T 1yiq_A 325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVY 404 (689)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEE
Confidence 9999999999999999885432110 0 011378888877766
Q ss_pred EEec---------------------------------------------CCcEEEEcCCCCCC-CCCCCCcccceeeccc
Q 023246 180 TCGI---------------------------------------------EKTVKLWAPMPTDF-PPLPDNAEKIMKANKQ 213 (285)
Q Consensus 180 t~~~---------------------------------------------d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~ 213 (285)
+... +|.|..||+.++++ .++..+. ..... ..
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g-~~ 482 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGG-TL 482 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCC-EE
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCc-cc
Confidence 5532 36788899887763 1221111 11000 01
Q ss_pred cCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 214 GREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 214 ~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
...+.+++.++.|+.++.||.++++.+-.+.
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eECCCEEEEECCCCcEEEEECCCCccceeee
Confidence 1234578889999999999999988776553
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=2.3e-06 Score=75.12 Aligned_cols=209 Identities=10% Similarity=0.101 Sum_probs=122.4
Q ss_pred cEEEEeeC------CCcEEEEEccCCcccCCcCCCCCcc--------------ccc--ccccC-CCCCcceEEEEEecCC
Q 023246 17 NYFAVGGS------DEYARVYDIRKCHWYSPISSDTPVD--------------TFC--PRHLI-GKNNIHITGLAYSNTS 73 (285)
Q Consensus 17 ~~l~tg~~------dg~v~iwd~~~~~~~~~~~~~~~~~--------------~~~--~~~~~-~~h~~~v~~i~~s~~~ 73 (285)
..++.++. ++.|+.||..+++.+..+....+.. .+. -.... .+.......++++|++
T Consensus 175 ~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~ 254 (677)
T 1kb0_A 175 GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL 254 (677)
T ss_dssp TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT
T ss_pred CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC
Confidence 35555553 7999999999998664443221110 000 00000 0111122357888888
Q ss_pred CEEEEec-CC-------------------cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCc-------eeeeeE
Q 023246 74 ELLISYN-DE-------------------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS-------QTVKGV 126 (285)
Q Consensus 74 ~~l~s~~-d~-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~ 126 (285)
.++..+. ++ .|..+|..++ +.+-.++..... ....-+
T Consensus 255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG----------------~~~W~~~~~~~d~wd~~~~~~p~l~ 318 (677)
T 1kb0_A 255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG----------------KYKWHYQETPGDNWDYTSTQPMILA 318 (677)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC----------------CEEEEEESSTTCCSCCCCCSCCEEE
T ss_pred CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC----------------CEEEEEecCCCcccccccCCCcEEE
Confidence 7666543 32 4888888887 455554432110 001112
Q ss_pred EEecCCC---cEEEEecCCCeEEEEecCCCceEEEEecccc-----------cc------------------------eE
Q 023246 127 NFFGPND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH-----------VV------------------------NQ 168 (285)
Q Consensus 127 ~~~~~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~-----------~v------------------------~~ 168 (285)
.. ..+| ..++.++.+|.++++|..+|+.+..+..... ++ ..
T Consensus 319 ~~-~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 319 DI-KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EE-EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred ec-ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 21 2366 6889999999999999999999876652110 00 15
Q ss_pred eEEcCCCCeEEEEecC-------------------------------------------CcEEEEcCCCCCCC-CCCCCc
Q 023246 169 LEPHPHIPMFATCGIE-------------------------------------------KTVKLWAPMPTDFP-PLPDNA 204 (285)
Q Consensus 169 ~~~~p~~~~l~t~~~d-------------------------------------------~~i~iwd~~~~~~~-~~~~~~ 204 (285)
++++|+..++++...+ +.|..||+.++++. +.. +.
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~ 476 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HV 476 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ES
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CC
Confidence 7889988887665432 67899999877631 221 11
Q ss_pred ccceeeccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 205 EKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
....... ....+.+++.++.|+.+++||..+++.+..+.
T Consensus 477 ~~~~~g~-~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 477 SPWNGGT-LTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp SSCCCCE-EEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCcCcc-eEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 1111100 11234477778999999999999998876664
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.59 E-value=2e-05 Score=64.03 Aligned_cols=105 Identities=10% Similarity=-0.019 Sum_probs=69.6
Q ss_pred CcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCC-CCCCC-cccceee
Q 023246 133 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFP-PLPDN-AEKIMKA 210 (285)
Q Consensus 133 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~-~~~~~-~~~~~~~ 210 (285)
+..++.++.++.+..+|..+++.+..... .....+.. ++..+..++.++.+..+|..+++.. ..... .......
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 45677778899999999999998876653 23344444 3567777888999999999887642 11101 1111001
Q ss_pred ccccCCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 211 NKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 211 ~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
...+..++.++.+|.++++|..+++.+....
T Consensus 315 ---~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 315 ---VLYNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp ---EEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ---EEECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 0123477888999999999998887665443
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.58 E-value=3.6e-06 Score=66.93 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=82.1
Q ss_pred CCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC
Q 023246 72 TSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK 151 (285)
Q Consensus 72 ~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~ 151 (285)
++.+.+.+.++.|..+|.. + +....+...... +.++.. .+++. +..++.++.|..+|..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g----------------~~~~~~~~~~~~--~~~~~~-~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G----------------TEKWRFKTKKAI--YATPIV-SEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S----------------CEEEEEECSSCC--CSCCEE-CTTSC-EEEECTTSEEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC-C----------------CEEEEEcCCCce--eeeeEE-cCCCE-EEEEcCCCEEEEECCC
Confidence 5555555568889999887 4 343344333322 555654 66666 5557778999999998
Q ss_pred CCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEE
Q 023246 152 GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHV 231 (285)
Q Consensus 152 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~v 231 (285)
++.+..+......+.++...+++..++.. +.|..+|...............+..+. ...+..+..++.++.+..
T Consensus 166 -g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~~~~~~~--~~~~g~l~v~t~~~gl~~ 239 (330)
T 3hxj_A 166 -GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAGYWTVTRPA--ISEDGTIYVTSLDGHLYA 239 (330)
T ss_dssp -SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEECTTSCEEEEECCSSCCCSCCE--ECTTSCEEEEETTTEEEE
T ss_pred -CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccCCcceeceE--ECCCCeEEEEcCCCeEEE
Confidence 88877776666678888888888765544 788999943322222221111221111 112235666677777877
Q ss_pred EEe
Q 023246 232 LRL 234 (285)
Q Consensus 232 wd~ 234 (285)
++.
T Consensus 240 ~~~ 242 (330)
T 3hxj_A 240 INP 242 (330)
T ss_dssp ECT
T ss_pred ECC
Confidence 763
No 241
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.58 E-value=1.5e-05 Score=70.87 Aligned_cols=193 Identities=10% Similarity=0.084 Sum_probs=103.6
Q ss_pred ceeEEEEc-CCCCcEEEEe-eCCC----cEEEEEccCC-cccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEE
Q 023246 5 RLNAIVID-PRNPNYFAVG-GSDE----YARVYDIRKC-HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLI 77 (285)
Q Consensus 5 ~v~~~~~s-~~~~~~l~tg-~~dg----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~ 77 (285)
.+...+|| ||+ .+||.+ ..+| +|+++|+.++ +.+. ..+ ......+.|+|||+.|+
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-------------~~~----~~~~~~~~WspDg~~l~ 236 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTIA-------------DKV----SGTNGEIVWGPDHTSLF 236 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCCC-------------CCE----EEECSCCEECSSTTEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeCC-------------ccc----cCceeeEEEecCCCEEE
Confidence 46678999 987 555543 3333 4999999987 5210 000 11134688999998655
Q ss_pred E-ecC-----CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec---CCCeEEEE
Q 023246 78 S-YND-----ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---DCGHLFIW 148 (285)
Q Consensus 78 s-~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~dg~v~vw 148 (285)
. ..+ ..|+++++.++. ......+..... .....+.+ +|++++|+... ....|+++
T Consensus 237 y~~~d~~~~~~~v~~~~lgt~~--------------~~~~lv~~~~~~-~~~~~~~~-SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 237 YVTKDETLRENKVWRHVMGKLQ--------------SEDVCLYEEHNP-LFSAFMYK-AADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp EEEECTTCCEEEEEEEETTSCG--------------GGCEEEEECCCT-TCEEEEEE-CTTSSEEEEEEECSSCEEEEEE
T ss_pred EEEECCCCCCCEEEEEECCCCc--------------hhcEEEEecCCC-ceEEEEEE-CCCCCEEEEEecCCCCceEEEE
Confidence 5 333 357888876541 001123332211 12456775 99999887654 34578899
Q ss_pred ecCCCc--e-EEEEe-cccccceEeEEcCCCCeEEEEecC--C--cEEEEcCCC-CCCCC-CCCCccc--ceeeccccCC
Q 023246 149 KKKGGK--L-VRLMV-GDRHVVNQLEPHPHIPMFATCGIE--K--TVKLWAPMP-TDFPP-LPDNAEK--IMKANKQGRE 216 (285)
Q Consensus 149 d~~~~~--~-~~~~~-~h~~~v~~~~~~p~~~~l~t~~~d--~--~i~iwd~~~-~~~~~-~~~~~~~--~~~~~~~~~~ 216 (285)
|+.++. . +..+. .......++.|+..+.+++....+ + .|..+++.+ ..... +..+... +.... ...
T Consensus 301 d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~--~~~ 378 (751)
T 2xe4_A 301 DLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIA--VRS 378 (751)
T ss_dssp ESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEE--ECS
T ss_pred ECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEE--EEC
Confidence 988752 3 13333 333455555555444344444443 2 566667654 33333 2222221 11121 123
Q ss_pred CceEEEeCCCCeEEEEE
Q 023246 217 DHSRITLTPDVIMHVLR 233 (285)
Q Consensus 217 ~~~~~~~s~d~~i~vwd 233 (285)
+.++++...++..++|-
T Consensus 379 ~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 379 NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp SEEEEEEEETTEEEEEE
T ss_pred CEEEEEEEeCCEEEEEE
Confidence 45667777777655443
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.53 E-value=3.7e-05 Score=61.06 Aligned_cols=169 Identities=12% Similarity=0.083 Sum_probs=100.3
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCccc--cccc---ccCCCCCcceEEEEEec-CCCEEEEe
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDT--FCPR---HLIGKNNIHITGLAYSN-TSELLISY 79 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~--~~~~---~~~~~h~~~v~~i~~s~-~~~~l~s~ 79 (285)
-.+++|++++ ++++++..++.|..|+..+++.... ........ .+.. .........+..+++.+ +++++++.
T Consensus 21 p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFVDF-AYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCEECCTTC-SSEEEECTTSEEEEECCTTTCEEEE-EESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred ceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceEEE-ecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 4568899975 7788888899999998876542110 00000000 0000 00000123578899997 77777765
Q ss_pred cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccC---ceeeeeEEEecC-CCcEEEEecC--------------
Q 023246 80 NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRN---SQTVKGVNFFGP-NDEYVMSGSD-------------- 141 (285)
Q Consensus 80 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~-~~~~l~~~~~-------------- 141 (285)
..+.|..+|..++ .+..+..... ......+++ ++ ++++.++-..
T Consensus 99 ~~~~i~~~d~~~g-----------------~~~~~~~~~~~~~~~~p~~i~~-d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 99 CYYHLSVVGSEGG-----------------HATQLATSVDGVPFKWLYAVTV-DQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp TTTEEEEECTTCE-----------------ECEEEESEETTEECSCEEEEEE-CTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCC-----------------EEEEecccCCCCcccccceEEE-ecCCCEEEEECCcccccccccceehcc
Confidence 5555888886643 2222221110 012677887 88 8887776432
Q ss_pred ---CCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEE-ecCCcEEEEcCCCC
Q 023246 142 ---CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPT 195 (285)
Q Consensus 142 ---dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~ 195 (285)
++.|..||..+++...... .......++++|+++.|..+ ...+.|..|++...
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred cCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 4789999987665433222 22456789999999865544 55688999998754
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=6.6e-06 Score=62.49 Aligned_cols=179 Identities=11% Similarity=0.041 Sum_probs=113.8
Q ss_pred ceEEEEEecCCCEEEE-ecCC--cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEe
Q 023246 63 HITGLAYSNTSELLIS-YNDE--LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG 139 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s-~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 139 (285)
-...+.|+ ++.++.+ |.+| .|+++|+.++ +.+..+...... .-..+.. . .++..+..
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg----------------kv~~~~~l~~~~-FgeGit~-~-g~~ly~lt 103 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG----------------KTLQQIELGKRY-FGEGISD-W-KDKIVGLT 103 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC----------------CEEEEEECCTTC-CEEEEEE-E-TTEEEEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCC----------------cEEEEEecCCcc-ceeEEEE-e-CCEEEEEE
Confidence 45789998 6666555 5554 8999999988 566666543321 1233554 2 23444555
Q ss_pred cCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC--Ccccc---eeeccc
Q 023246 140 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD--NAEKI---MKANKQ 213 (285)
Q Consensus 140 ~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~--~~~~~---~~~~~~ 213 (285)
-.++.+.+||..+.+.+.++.... ....+++++..|+.+..++.|.++|+.+.++ .++.. ...++ ..+.+
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~- 179 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW- 179 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE-
T ss_pred eeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE-
Confidence 578999999999999999987532 2234445677766666678899999987763 22221 11222 12222
Q ss_pred cCCCceEEEeCCCCeEEEEEecccccceeEeeeccc-------------cccCCCCCcCeEEEeec
Q 023246 214 GREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNA-------------ADFESDEEEGETYLLGF 266 (285)
Q Consensus 214 ~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~v~~~~~ 266 (285)
.++++++..-.+..|.+.|.++++.+..+..+.-. ..++.+++..++|+.+-
T Consensus 180 -~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 180 -VDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -ETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -ECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 24456666667889999999999888888654211 22445556667777663
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.51 E-value=6.8e-06 Score=62.47 Aligned_cols=178 Identities=7% Similarity=-0.002 Sum_probs=113.8
Q ss_pred ceEEEEEecCCCEEEE-ecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC
Q 023246 63 HITGLAYSNTSELLIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD 141 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 141 (285)
-...+.|+. +.++.+ +.++.|+++|+.++ +.+..+ ... ...-..+++ . .++..+..-.
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tg----------------kv~~~~-l~~-~~FgeGit~-~-g~~Ly~ltw~ 114 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESA----------------QPVWME-RLG-NIFAEGLAS-D-GERLYQLTWT 114 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCS----------------SCSEEE-ECT-TCCEEEEEE-C-SSCEEEEESS
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCC----------------cEEeEE-CCC-CcceeEEEE-e-CCEEEEEEcc
Confidence 457888874 455555 56888999999988 566665 222 211234654 3 3445555667
Q ss_pred CCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC--Ccccc---eeeccccC
Q 023246 142 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD--NAEKI---MKANKQGR 215 (285)
Q Consensus 142 dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~--~~~~~---~~~~~~~~ 215 (285)
++.+.+||..+.+.+.++... ..-..++ ++++.|+.+..++.|.++|+.+.++ .++.. ....+ ..+.+.
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-- 189 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-- 189 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--
T ss_pred CCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--
Confidence 999999999999999998753 2223444 5677776666788999999988764 22221 22222 122221
Q ss_pred CCceEEEeCCCCeEEEEEecccccceeEeeecc--------------ccccCCCCCcCeEEEeec
Q 023246 216 EDHSRITLTPDVIMHVLRLQRRQTLAYRERRYN--------------AADFESDEEEGETYLLGF 266 (285)
Q Consensus 216 ~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~v~~~~~ 266 (285)
++++++....+..|.+.|.++++.+.++..+.- ...++.+++.+++|+.|-
T Consensus 190 dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 190 NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 445566666788999999999988888865421 122455556667777663
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=5.8e-06 Score=72.61 Aligned_cols=54 Identities=9% Similarity=0.009 Sum_probs=44.4
Q ss_pred CeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 143 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 143 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
|.|..||+.+++.+..+.. ..++....+...+..++.++.|+.+++||.+++++
T Consensus 457 g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 7899999999999888763 34555566677788888889999999999998874
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.48 E-value=8.4e-05 Score=55.93 Aligned_cols=152 Identities=9% Similarity=0.047 Sum_probs=99.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCC--cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE--ec
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDE--YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS--YN 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s--~~ 80 (285)
-...+.|++ + .++.+.+.+| .|+.+|+.+++.......+ . ...--.+++. +..|.. -.
T Consensus 22 ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-------------~-~~fgeGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 22 FTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-------------P-PYFGAGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp CEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-------------T-TCCEEEEEEE--TTEEEEEESS
T ss_pred ccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-------------C-CcceeEEEEe--CCEEEEEEee
Confidence 355788887 3 6777777654 8999999999854332111 1 1011233333 443333 35
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
++.+.+||..+. +.+.++..... -..++ ++++.|+.+..++.|.++|..+.+.+.++.
T Consensus 84 ~~~v~v~D~~tl----------------~~~~ti~~~~~---Gwglt---~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 84 NHEGFVYDLATL----------------TPRARFRYPGE---GWALT---SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp SSEEEEEETTTT----------------EEEEEEECSSC---CCEEE---ECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCcC----------------cEEEEEeCCCC---ceEEe---eCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 999999999887 67777775432 24554 345555555568999999999999988876
Q ss_pred ccc-----ccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 161 GDR-----HVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 161 ~h~-----~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
... ..++.+.|. +++.++..-.+..|.+.|++++++
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBE
T ss_pred EccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCE
Confidence 422 244566665 566666555677999999988764
No 247
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.45 E-value=0.00018 Score=56.58 Aligned_cols=160 Identities=11% Similarity=0.080 Sum_probs=103.8
Q ss_pred eEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccC--CCCCcceEEEEE---ecCCCEEEEec-
Q 023246 7 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI--GKNNIHITGLAY---SNTSELLISYN- 80 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~---s~~~~~l~s~~- 80 (285)
.+++|++.++.++++.-..++|..|+...+..... ....+. ......+..|.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~----------~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV----------VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE----------CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE----------ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 36889886545555555899999999975532110 001100 011224579999 68888777532
Q ss_pred -------------CCcEEEEEcC---CCCCCCCCCCCCccccCCCCceEeec--cc---------CceeeeeEEEecCCC
Q 023246 81 -------------DELVYLFEKN---MGLGPSPLSLSPEDLQKREEPQVYSG--HR---------NSQTVKGVNFFGPND 133 (285)
Q Consensus 81 -------------d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~i~~~~~~~~~~ 133 (285)
+..|..||+. ++ +.+..... .. .......++. +++|
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg----------------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav-D~~G 148 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENS----------------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ-DRDG 148 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTC----------------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEE-CTTS
T ss_pred cccccccccccCCCCEEEEEcCCcCCCC----------------CEEEEecCccccccccccccccccCCceeEE-CCCC
Confidence 5679999988 55 34333321 11 1123788997 9999
Q ss_pred cEEEEecCC-CeEEEEecCCCceEEEEe-c-----ccccceEeEEcCCCCeEEEEecCCcEEEEcCCC
Q 023246 134 EYVMSGSDC-GHLFIWKKKGGKLVRLMV-G-----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 134 ~~l~~~~~d-g~v~vwd~~~~~~~~~~~-~-----h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 194 (285)
+..++++.. +.|...+... +.+..+. . .....+.++++|+++.|+.....+.+..+|++.
T Consensus 149 naYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 999998888 8888888763 3333221 1 122367899999999988777799999999873
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.43 E-value=0.00026 Score=56.09 Aligned_cols=204 Identities=7% Similarity=-0.034 Sum_probs=115.6
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEEE-ecCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~s-~~d~ 82 (285)
...+++|++.++.++++-...+.|..+++...... . ....+....-.....+++.+.+ +++++ ...+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------~-----~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~ 99 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 99 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------c-----ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCC
Confidence 35688999866566666667789999988752100 0 0011111112345789998755 45555 3588
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEe-ecccCceeeeeEEEecCCCcEEEEec-CC-CeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVMSGS-DC-GHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-g~v~vwd~~~~~~~~~~ 159 (285)
.|.+++.... ....+ ..... ....+++ +|.+..++.+. .. +.|..+++. ++....+
T Consensus 100 ~I~~~~~~g~-----------------~~~~~~~~~~~--~P~~iav-dp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~ 158 (316)
T 1ijq_A 100 TVSVADTKGV-----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL 158 (316)
T ss_dssp EEEEEETTSS-----------------SEEEEEECTTC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred EEEEEeCCCC-----------------ceEEEEECCCC--CcceEEe-CCCCCEEEEEccCCCCeEEEEcCC-CCCeEEE
Confidence 9999998654 22222 22222 2678887 87555444433 33 789888886 4444433
Q ss_pred e-cccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCCCCC---CcccceeeccccCCCceEEEeCCCCeEEEEEe
Q 023246 160 V-GDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRL 234 (285)
Q Consensus 160 ~-~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~ 234 (285)
. ..-.....++++|++..|..+. ..+.|..+++.+.....+.. .......+.. ..+.++++-...+.|..++.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav--~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEET
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEE--ECCEEEEEECCCCeEEEEeC
Confidence 2 2335678999999877655554 56789999987644322210 1111112211 23456667677788888876
Q ss_pred ccccccee
Q 023246 235 QRRQTLAY 242 (285)
Q Consensus 235 ~~~~~~~~ 242 (285)
.+++....
T Consensus 237 ~~g~~~~~ 244 (316)
T 1ijq_A 237 LTGSDVNL 244 (316)
T ss_dssp TTCCCCEE
T ss_pred CCCcceEE
Confidence 55544433
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.41 E-value=0.00031 Score=56.50 Aligned_cols=199 Identities=8% Similarity=-0.091 Sum_probs=113.9
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
...+++|++.++.++.+-...+.|..+++...... .+..........+++.+.+. ++++. ..+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------------~~~~~~~~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---------------EEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCce---------------EEEeCCCCCccEEEEecCCCeEEEEcCCCC
Confidence 35688999866556666667788888888755311 01011123456889997554 54553 478
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcE-EEEecCC-CeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEY-VMSGSDC-GHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~-l~~~~~d-g~v~vwd~~~~~~~~~~ 159 (285)
.|.+.++... ....+. .... ....+++ +|.+.. +++-... +.|..+++........+
T Consensus 139 ~I~~~~~dG~-----------------~~~~l~~~~l~--~P~~iav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 198 (349)
T 3v64_C 139 RIEVANLDGA-----------------HRKVLLWQSLE--KPRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 198 (349)
T ss_dssp EEEEEETTSC-----------------SCEEEECTTCS--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEESC
T ss_pred eEEEEcCCCC-----------------ceEEEEeCCCC--CcceEEE-ecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 8999998754 223332 2222 2678887 775544 4444444 78999988743332222
Q ss_pred ecccccceEeEEcCCCCeEEEE-ecCCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 160 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
...-...+.++++|++..|..+ ...+.|..+++.+.....+. ........+.. ..+.++++-...+.|...+..++
T Consensus 199 ~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 199 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCC
Confidence 2223457899999877665544 45678999998765432211 11111111211 23446666666777777764444
Q ss_pred ccc
Q 023246 238 QTL 240 (285)
Q Consensus 238 ~~~ 240 (285)
+..
T Consensus 277 ~~~ 279 (349)
T 3v64_C 277 KNQ 279 (349)
T ss_dssp CSC
T ss_pred Ccc
Confidence 443
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00016 Score=55.03 Aligned_cols=162 Identities=7% Similarity=0.062 Sum_probs=99.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~ 83 (285)
.+..++|+|++..++++...++.|...|.. ++....+. +.+ ......|++.+++.++++. .++.
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-------------l~g-~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-------------LDF-VKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-------------CSS-CSSEEEEEECSTTEEEEEETTTTE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-------------cCC-CCChHHeEEeCCCEEEEEECCCCc
Confidence 588999999865677778888889889987 65322111 011 2457788998888877775 4788
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEee----cccCceeeeeEEEecCCCcEEEEecCCCeEEEEecC---CCceE
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS----GHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKK---GGKLV 156 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~---~~~~~ 156 (285)
+.++++..... + ..+.... .........+++| ++.++.|+++.+.....+|.+. ....+
T Consensus 93 l~~~~v~~~~~-----i--------~~~~~~~~~~~~~~~N~g~EGLA~-d~~~~~L~va~E~~p~~i~~~~g~~~~~~l 158 (255)
T 3qqz_A 93 IYVISLTPNSE-----V--------KILKKIKIPLQESPTNCGFEGLAY-SRQDHTFWFFKEKNPIEVYKVNGLLSSNEL 158 (255)
T ss_dssp EEEEEECTTCC-----E--------EEEEEEECCCSSCCCSSCCEEEEE-ETTTTEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred EEEEEcCCCCe-----e--------eeeeeeccccccccccCCcceEEE-eCCCCEEEEEECcCCceEEEEcccccCCce
Confidence 99999875410 0 0011111 0111123688997 8888777666655444444443 12222
Q ss_pred EEEe-------cccccceEeEEcCCCCe-EEEEecCCcEEEEcCCCC
Q 023246 157 RLMV-------GDRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMPT 195 (285)
Q Consensus 157 ~~~~-------~h~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~~ 195 (285)
..+. .+...+.+++++|.... ++.....+.+..+|..+.
T Consensus 159 ~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 159 HISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp EEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred eeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 2221 12345789999996555 555666778888998765
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.37 E-value=8.7e-05 Score=58.91 Aligned_cols=198 Identities=9% Similarity=0.064 Sum_probs=108.6
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCCEEEEec---
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSELLISYN--- 80 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~~l~s~~--- 80 (285)
...+++++++++++++ +...+.|..+|..+++... +. .............+++.+ +|++.++..
T Consensus 81 ~p~gi~~~~~~g~l~v-~d~~~~i~~~d~~~g~~~~----------~~-~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~ 148 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYI-VDCYYHLSVVGSEGGHATQ----------LA-TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL 148 (322)
T ss_dssp CEEEEEEETTTTEEEE-EETTTEEEEECTTCEECEE----------EE-SEETTEECSCEEEEEECTTTCCEEEEESCSS
T ss_pred CCceEEEcCCCCcEEE-EECCCCEEEEeCCCCEEEE----------ec-ccCCCCcccccceEEEecCCCEEEEECCccc
Confidence 4678999973334444 4444557888876543110 00 000001123467899999 998777632
Q ss_pred ---------------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEe-cCCCe
Q 023246 81 ---------------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSG-SDCGH 144 (285)
Q Consensus 81 ---------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~ 144 (285)
++.|..||..++ ....+..... ....+++ +++++.++.+ ...+.
T Consensus 149 ~~~~~~~~~~~~~~~~g~v~~~d~~~~-----------------~~~~~~~~~~--~p~gia~-~~dg~~lyv~d~~~~~ 208 (322)
T 2fp8_A 149 YDDRGVQQIMDTSDKTGRLIKYDPSTK-----------------ETTLLLKELH--VPGGAEV-SADSSFVLVAEFLSHQ 208 (322)
T ss_dssp CCTTCHHHHHHHTCCCEEEEEEETTTT-----------------EEEEEEEEES--CCCEEEE-CTTSSEEEEEEGGGTE
T ss_pred ccccccceehcccCCCceEEEEeCCCC-----------------EEEEeccCCc--cCcceEE-CCCCCEEEEEeCCCCe
Confidence 267888887654 2222221111 1567886 9998865544 56789
Q ss_pred EEEEecCCCc--eEEEEecccccceEeEEcCCCCeEEEEec----------CCcEEEEcCCCCCCCCCCCCc----ccce
Q 023246 145 LFIWKKKGGK--LVRLMVGDRHVVNQLEPHPHIPMFATCGI----------EKTVKLWAPMPTDFPPLPDNA----EKIM 208 (285)
Q Consensus 145 v~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~t~~~----------d~~i~iwd~~~~~~~~~~~~~----~~~~ 208 (285)
|.+|++.... ....+....+ ...++++++|++.++... .+.|..++.....+..+.... ..+.
T Consensus 209 I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~ 287 (322)
T 2fp8_A 209 IVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFE 287 (322)
T ss_dssp EEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCC
T ss_pred EEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccce
Confidence 9999987421 1222211223 788999999987666544 456888887643332221111 1111
Q ss_pred eeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 209 KANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
... ...+.++++....+.|..+++..+
T Consensus 288 ~~~--~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 288 QIQ--EHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEE--EETTEEEEECSSCSEEEEEEC---
T ss_pred EEE--EeCCEEEEeecCCCceEEEecccc
Confidence 111 123445666666777887776544
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.35 E-value=0.00041 Score=56.86 Aligned_cols=206 Identities=8% Similarity=-0.021 Sum_probs=117.3
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~s~-~d~ 82 (285)
.+.+++|++.++.++.+-...+.|+.+++....... ....+..........+++.+.+ +++++- ..+
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-----------~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----------SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------C-----------CCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-----------cceEEEeCCCCCcccEEEEecCCceEEEECCCC
Confidence 467899998654566665667888888876421000 1111112223467889999854 455553 478
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec--CCCeEEEEecCCCceEEEEe
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~ 160 (285)
.|.+.++... .....+..... ....+++ +|.+.+|+... ..+.|...++........+.
T Consensus 182 ~I~~~~~~g~----------------~~~~l~~~~~~--~P~~iav-dp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 182 TVSVADTKGV----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEEECTTTC----------------SEEEEEECSSC--CEEEEEE-ETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred eEEEEeCCCC----------------ceEEEEeCCCC--CcceEEE-ecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence 8999988754 22222222222 2678887 77655554433 24789999987444333333
Q ss_pred cccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCCCCC---CcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 161 GDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
..-...+.|+++|++..|..+. ..+.|..+++.+.....+.. .......+.. ..+.++++-...+.|..++..+
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCSEEEEESSS
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCeEEEEEcCC
Confidence 3335678999998877766554 56789999987654332211 1111112211 2344666666677788787555
Q ss_pred ccccee
Q 023246 237 RQTLAY 242 (285)
Q Consensus 237 ~~~~~~ 242 (285)
++....
T Consensus 321 G~~~~~ 326 (400)
T 3p5b_L 321 GSDVNL 326 (400)
T ss_dssp CCCCEE
T ss_pred CCceEE
Confidence 544433
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.35 E-value=0.00031 Score=57.35 Aligned_cols=202 Identities=7% Similarity=-0.088 Sum_probs=115.5
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
...+++|++.++.++++-...+.|..+++...... .+..........+++.+.+. ++++- ..+
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------------~~~~~~~~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---------------EEECSSCSCCCCEEEETTTTEEEEEETTTT
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---------------EEEeCCCCCccEEEEEeCCCeEEEEcCCCC
Confidence 45678999865566666667788888888755311 01011122446788987554 44553 477
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEE-EEecCC-CeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYV-MSGSDC-GHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l-~~~~~d-g~v~vwd~~~~~~~~~~ 159 (285)
.|.+.++... ....+. .... ....+++ +|.+..| ++-... +.|..+++.........
T Consensus 182 ~I~~~~~dg~-----------------~~~~l~~~~l~--~P~giav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 182 RIEVANLDGA-----------------HRKVLLWQSLE--KPRAIAL-HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp EEEECBTTSC-----------------SCEEEECSSCS--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred eEEEEeCCCC-----------------ceEEeecCCCC--CCcEEEE-EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 8888887654 222222 2222 2678887 7765554 443344 78999998744333333
Q ss_pred ecccccceEeEEcCCCCeEEEE-ecCCcEEEEcCCCCCCCCCCC-CcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 160 VGDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
...-...+.|+++|++..|..+ ...+.|..+++.+.....+.. .......+.. ..+.++++-...+.|..++..++
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTC
T ss_pred ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCC
Confidence 3333457899999876665544 456789999987644322211 1111112211 23446667677777877775444
Q ss_pred ccceeE
Q 023246 238 QTLAYR 243 (285)
Q Consensus 238 ~~~~~~ 243 (285)
+....+
T Consensus 320 ~~~~~i 325 (386)
T 3v65_B 320 KNQEII 325 (386)
T ss_dssp CSCEEE
T ss_pred cceEEE
Confidence 444333
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.34 E-value=4.9e-05 Score=57.19 Aligned_cols=162 Identities=9% Similarity=-0.059 Sum_probs=103.1
Q ss_pred cceEEEEEecCCCEEEE-ecC--CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEE
Q 023246 62 IHITGLAYSNTSELLIS-YND--ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS 138 (285)
Q Consensus 62 ~~v~~i~~s~~~~~l~s-~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 138 (285)
.-...+.|++ +.++.+ |.. ..|+.+|+.++ +.+......... .--.++. . .++..+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg----------------kv~~~~~l~~~~-fgeGi~~-~-~~~ly~l 80 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG----------------RILQRAEVPPPY-FGAGIVA-W-RDRLIQL 80 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC----------------CEEEEEECCTTC-CEEEEEE-E-TTEEEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCC----------------CEEEEEeCCCCc-ceeEEEE-e-CCEEEEE
Confidence 4577899987 555555 443 58999999988 566666543321 1234454 2 3455555
Q ss_pred ecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCCC--Ccccceeeccc-c
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLPD--NAEKIMKANKQ-G 214 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~~~~~-~ 214 (285)
.-.++.+.+||..+.+.+.++.... .-..++ +++..|+.+..++.|.++|+.+.++ .++.. +..++..++.. .
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred EeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 6679999999999999999988533 223444 5666666666688999999988763 22221 22222111110 1
Q ss_pred CCCceEEEeCCCCeEEEEEecccccceeEeee
Q 023246 215 REDHSRITLTPDVIMHVLRLQRRQTLAYRERR 246 (285)
Q Consensus 215 ~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~ 246 (285)
.+++.++..-.+..|.+.|..+++.+..+..+
T Consensus 158 ~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 158 VNGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp ETTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred eCCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 13445555556789999999999888887644
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.33 E-value=6.4e-05 Score=66.16 Aligned_cols=204 Identities=9% Similarity=0.069 Sum_probs=114.4
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 96 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~ 96 (285)
..+++++.++.|.-+|..+++.+............. ... . ...-..+.. .++.+++.+.|+.|+.+|..++
T Consensus 71 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~-~~~--~-~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~TG---- 141 (689)
T 1yiq_A 71 GVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAG-EAC--C-DAVNRGVAV-WKGKVYVGVLDGRLEAIDAKTG---- 141 (689)
T ss_dssp TEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGG-GCT--T-CSCCCCCEE-ETTEEEEECTTSEEEEEETTTC----
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccc-ccc--c-cCCCCccEE-ECCEEEEEccCCEEEEEECCCC----
Confidence 467778888999999999998655443322111000 000 0 000011122 2344444456999999999988
Q ss_pred CCCCCCccccCCCCceEeecccCceeeeeEEEecC---CCcEEEEec-----CCCeEEEEecCCCceEEEEecc--c---
Q 023246 97 PLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP---NDEYVMSGS-----DCGHLFIWKKKGGKLVRLMVGD--R--- 163 (285)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~-----~dg~v~vwd~~~~~~~~~~~~h--~--- 163 (285)
+.+-.+...........+.. +| ++..++..+ .+|.|+.||.++|+.+..+... .
T Consensus 142 ------------~~~W~~~~~~~~~~~~~~~~-sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~ 208 (689)
T 1yiq_A 142 ------------QRAWSVDTRADHKRSYTITG-APRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKL 208 (689)
T ss_dssp ------------CEEEEEECCSCTTSCCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTS
T ss_pred ------------CEeeeecCcCCCCCCccccC-CcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccc
Confidence 45544443200000011110 12 444443322 3789999999999998877521 0
Q ss_pred --------------------------ccceEeEEcCCCCeEEEEecCCc-------------------EEEEcCCCCCCC
Q 023246 164 --------------------------HVVNQLEPHPHIPMFATCGIEKT-------------------VKLWAPMPTDFP 198 (285)
Q Consensus 164 --------------------------~~v~~~~~~p~~~~l~t~~~d~~-------------------i~iwd~~~~~~~ 198 (285)
.....++++|+...++.+..++. |..+|+++++..
T Consensus 209 ~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 209 PPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp CCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred ccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 01125788888888888877753 999999888741
Q ss_pred ---CCCCCc-------ccceeec--cccCCCceEEEeCCCCeEEEEEeccccccee
Q 023246 199 ---PLPDNA-------EKIMKAN--KQGREDHSRITLTPDVIMHVLRLQRRQTLAY 242 (285)
Q Consensus 199 ---~~~~~~-------~~~~~~~--~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~ 242 (285)
+...+. ...+... ........++.++.+|.++++|..+++.+..
T Consensus 289 W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 289 WHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 111111 1111110 0000123688899999999999998877643
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.29 E-value=0.00012 Score=64.15 Aligned_cols=73 Identities=10% Similarity=0.199 Sum_probs=46.4
Q ss_pred EEEEcCCCCcEEEEeeCCC-----------cEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE
Q 023246 8 AIVIDPRNPNYFAVGGSDE-----------YARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL 76 (285)
Q Consensus 8 ~~~~s~~~~~~l~tg~~dg-----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l 76 (285)
++++.|.++.+++.|+.+. .+.+||..+++.... ......+.....++++..+++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~------------~~~~~~~~~~~~~~~~~~~g~ly 257 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR------------TVTVTKHDMFCPGISMDGNGQIV 257 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC------------EEEECSCCCSSCEEEECTTSCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC------------cccCCCCCCccccccCCCCCCEE
Confidence 4566762347888887543 588899988764211 11111222334457788899988
Q ss_pred EEec--CCcEEEEEcCCC
Q 023246 77 ISYN--DELVYLFEKNMG 92 (285)
Q Consensus 77 ~s~~--d~~i~iwd~~~~ 92 (285)
+.|. +..+.+||..+.
T Consensus 258 v~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 258 VTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp EECSSSTTCEEEEEGGGT
T ss_pred EeCCCCCCceEEecCcCC
Confidence 8753 668999998765
No 257
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.00043 Score=54.87 Aligned_cols=201 Identities=9% Similarity=-0.040 Sum_probs=115.7
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEEEe-cCCc
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLISY-NDEL 83 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~s~-~d~~ 83 (285)
..+++|++.++.++.+-...+.|..+++...... ..+....-.....+++.+.+ .++++- ..+.
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~--------------~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~ 102 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--------------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNR 102 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC--------------CEEEEECCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce--------------EEEEcCCCCCccEEEEEcCCCeEEEEECCCCE
Confidence 4578888865456666666788888887754210 00001112245678998755 455553 4788
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEEec--CCCeEEEEecCCCceEEEEe
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~ 160 (285)
|.++++... ....+. .... ....+++ +|.+.+++.+. ..+.|...++..........
T Consensus 103 I~~~~~dG~-----------------~~~~l~~~~~~--~P~giav-dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 103 IEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL-DPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp EEEEETTSC-----------------SCEEEECSSCS--SEEEEEE-EGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEECCCC-----------------cEEEEEeCCCC--CccEEEE-eCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 999998754 223332 2222 2678887 77655554443 36789998887433322222
Q ss_pred cccccceEeEEcCCCCeEEEE-ecCCcEEEEcCCCCCCCCCCC-CcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 161 GDRHVVNQLEPHPHIPMFATC-GIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
..-...+.|+++|++..|..+ ...+.|..+++.+.....+.. .......+.. ..+.++++-...+.|..++..+++
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav--~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL--FEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE--ETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE--eCCEEEEEecCCCeEEEEECCCCC
Confidence 223456899999977665554 456789999987644322211 1111112211 234466676677888888876555
Q ss_pred ccee
Q 023246 239 TLAY 242 (285)
Q Consensus 239 ~~~~ 242 (285)
....
T Consensus 241 ~~~~ 244 (318)
T 3sov_A 241 GLRE 244 (318)
T ss_dssp SCEE
T ss_pred ceEE
Confidence 4433
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.28 E-value=0.00089 Score=53.80 Aligned_cols=186 Identities=10% Similarity=-0.006 Sum_probs=106.0
Q ss_pred ceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEe
Q 023246 63 HITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSG 139 (285)
Q Consensus 63 ~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~ 139 (285)
.+..++|++... ++.+. ..+.|..+++... .....+..... ....+++ ++ .+++.++-
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~----------------~~~~~~~~~~~--~p~glav-d~~~g~ly~~d 134 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGS----------------NVEEVVSTGLE--SPGGLAV-DWVHDKLYWTD 134 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC----------------SCEEEECSSCS--CCCEEEE-ETTTTEEEEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCC----------------CceEEEeCCCC--CccEEEE-ecCCCeEEEEc
Confidence 478999997665 44453 4788999998765 22222222212 2567886 65 45555666
Q ss_pred cCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCe-EEEEecC-CcEEEEcCCCCCCCCCCC-CcccceeeccccCC
Q 023246 140 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPM-FATCGIE-KTVKLWAPMPTDFPPLPD-NAEKIMKANKQGRE 216 (285)
Q Consensus 140 ~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~t~~~d-~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 216 (285)
...+.|.+.++........+...-.....++++|.+.. +++-... +.|...++.+.....+.. .......+......
T Consensus 135 ~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 135 SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTT
T ss_pred CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCC
Confidence 67789999998754443333333456789999996655 4444444 788888887654333211 11222223222234
Q ss_pred CceEEEeCCCCeEEEEEecccccceeEeee-ccccccCCCCCcCeEEEeecCCC
Q 023246 217 DHSRITLTPDVIMHVLRLQRRQTLAYRERR-YNAADFESDEEEGETYLLGFSDS 269 (285)
Q Consensus 217 ~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~ 269 (285)
..++++-+..+.|..+++........+... .....++. +++.+|+.+...+
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav--~~~~ly~td~~~~ 266 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV--FEDSLYWTDWHTK 266 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE--ETTEEEEEETTTT
T ss_pred CEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE--ECCEEEEecCCCC
Confidence 556677777788888887654332222111 01112222 2345777766554
No 259
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.26 E-value=8.1e-05 Score=63.19 Aligned_cols=150 Identities=9% Similarity=0.021 Sum_probs=96.2
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCC--Cccccc-----ccccC-------------CC----CCcceEEEEEec-
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDT--PVDTFC-----PRHLI-------------GK----NNIHITGLAYSN- 71 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~-----~~~~~-------------~~----h~~~v~~i~~s~- 71 (285)
..|.+|+..|.++|+-+.+++.+..+.... +...+- .+.+. .+ ..+.......|.
T Consensus 16 ~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t 95 (595)
T 1fwx_A 16 YGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFT 95 (595)
T ss_dssp EEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEE
T ss_pred EEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCC
Confidence 357889999999999999998765544211 111110 00000 00 011122244444
Q ss_pred ----CCCEEEEe-c-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEec-CCCcEEEEec----
Q 023246 72 ----TSELLISY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFG-PNDEYVMSGS---- 140 (285)
Q Consensus 72 ----~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~---- 140 (285)
||+++... . +..|.+.|+.+. +....+.-... .....+++.. |+++++++++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~----------------~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~ 158 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVM----------------KCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDET 158 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTT----------------EEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCc----------------eEeeEEeCCCC-CCCcceeeeecCCCcEEEEeccccc
Confidence 77776664 3 778999999887 55554432211 2266777535 8999998884
Q ss_pred --------------CCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecC
Q 023246 141 --------------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE 184 (285)
Q Consensus 141 --------------~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d 184 (285)
.++.+.+.|..+.+.+.++..-. ....++++|+++++++.+.+
T Consensus 159 p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~ 215 (595)
T 1fwx_A 159 PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYN 215 (595)
T ss_dssp ESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESC
T ss_pred ccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecC
Confidence 35689999999999888887433 56778899999997777744
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.21 E-value=0.00062 Score=53.55 Aligned_cols=223 Identities=11% Similarity=0.006 Sum_probs=118.5
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec--CC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN--DE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~--d~ 82 (285)
....++|+|++ +++++-..++.|..||...... .... ....+..+++.++|+++++.. ++
T Consensus 33 ~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~~~-------------~~~~----~~~~p~gia~~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 33 FLENLASAPDG-TIFVTNHEVGEIVSITPDGNQQ-------------IHAT----VEGKVSGLAFTSNGDLVATGWNADS 94 (306)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTTCCEE-------------EEEE----CSSEEEEEEECTTSCEEEEEECTTS
T ss_pred CcceEEECCCC-CEEEEeCCCCeEEEECCCCceE-------------EEEe----CCCCceeEEEcCCCcEEEEeccCCc
Confidence 35678999975 7777766788999998764321 0001 123588999999999777642 22
Q ss_pred -cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCce-EEEEe
Q 023246 83 -LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL-VRLMV 160 (285)
Q Consensus 83 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~ 160 (285)
.|..++..++ +. ..+...........++. .+.+..+++-...+.|+++|..+++. +....
T Consensus 95 ~~v~~~d~~~g----------------~~-~~~~~~~~~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 95 IPVVSLVKSDG----------------TV-ETLLTLPDAIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp CEEEEEECTTS----------------CE-EEEEECTTCSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEcCCCC----------------eE-EEEEeCCCccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 4666776655 22 22221111112345554 45555556555688999999875432 22111
Q ss_pred c---------ccccceEeEEcCCCCeEE-EEecCCcEEEEcCCC-CCCCCCC--CCcccceeeccccCCCceEEEeCCCC
Q 023246 161 G---------DRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPMP-TDFPPLP--DNAEKIMKANKQGREDHSRITLTPDV 227 (285)
Q Consensus 161 ~---------h~~~v~~~~~~p~~~~l~-t~~~d~~i~iwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~d~ 227 (285)
. .-...+.+ +|+++.|. +-...+.|..+++.. +.+.... ......-.+ ....++.++++-...+
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi-~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDF-AFDVEGNLYGATHIYN 233 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSE-EEBTTCCEEEECBTTC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCe-EECCCCCEEEEeCCCC
Confidence 1 11223445 78887654 445677899999864 3221100 000000000 0122344666666677
Q ss_pred eEEEEEeccccccee--Eeee-ccccccCCC---CCcCeEEEeecC
Q 023246 228 IMHVLRLQRRQTLAY--RERR-YNAADFESD---EEEGETYLLGFS 267 (285)
Q Consensus 228 ~i~vwd~~~~~~~~~--~~~~-~~~~~~~~~---~~~~~v~~~~~~ 267 (285)
.|.+++.. ++.... +... .....++.. ++.+.+|+....
T Consensus 234 ~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 234 SVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 88888754 322111 1111 112334443 455679988764
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.19 E-value=0.0016 Score=53.09 Aligned_cols=158 Identities=8% Similarity=-0.043 Sum_probs=94.3
Q ss_pred cceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEE
Q 023246 62 IHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMS 138 (285)
Q Consensus 62 ~~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~ 138 (285)
..+..++|.+.+. ++.+. ..+.|..+++... ....+..... .....+++ ++ .+++.++
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~-----------------~~~~~~~~~~-~~p~glav-d~~~g~lY~~ 176 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGS-----------------NVEEVVSTGL-ESPGGLAV-DWVHDKLYWT 176 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-----------------CEEEEECSSC-SCCCCEEE-ETTTTEEEEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCC-----------------CcEEEEeCCC-CCccEEEE-EeCCCeEEEE
Confidence 3578999997655 45553 4788999998764 2222221111 12567886 65 4555566
Q ss_pred ecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe-cC-CcEEEEcCCCCCCCCCC-CCcccceeeccccC
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGR 215 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~-~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~ 215 (285)
-...+.|.+.++........+.........++++|.+..|..+. .. +.|...++.+.....+. ........+.....
T Consensus 177 d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 177 DSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 256 (386)
T ss_dssp ETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGG
T ss_pred cCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCC
Confidence 66678999999875444433443345678999999766544443 44 67888888765432221 11111222222223
Q ss_pred CCceEEEeCCCCeEEEEEecccc
Q 023246 216 EDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 216 ~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
...++++-+..+.|..+++....
T Consensus 257 ~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 257 GRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp GTEEEEEETTTTEEEEECTTSCS
T ss_pred CCEEEEEECCCCEEEEEeCCCCe
Confidence 44566777777888888876543
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.18 E-value=0.00026 Score=60.92 Aligned_cols=113 Identities=11% Similarity=-0.054 Sum_probs=71.9
Q ss_pred CCCc---EEEEecCCCeEEEEecCCCceEEEEeccc-------------ccc--------------------------eE
Q 023246 131 PNDE---YVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV--------------------------NQ 168 (285)
Q Consensus 131 ~~~~---~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-------------~~v--------------------------~~ 168 (285)
.+++ .++.++.+|.++++|..+|+.+....... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 3664 56778899999999999999887664211 111 24
Q ss_pred eEEcCCCCeEEEEe-------------------------------------cCCcEEEEcCCCCCC-CCCCCCcccceee
Q 023246 169 LEPHPHIPMFATCG-------------------------------------IEKTVKLWAPMPTDF-PPLPDNAEKIMKA 210 (285)
Q Consensus 169 ~~~~p~~~~l~t~~-------------------------------------~d~~i~iwd~~~~~~-~~~~~~~~~~~~~ 210 (285)
++++|+..++.... .++.|..||+.++++ .++. ........
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~-~~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKW-EKFAAWGG 469 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEE-ESSCCCSB
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEec-CCCCccce
Confidence 67888777765543 246888899887764 2221 11111100
Q ss_pred ccccCCCceEEEeCCCCeEEEEEecccccceeEee
Q 023246 211 NKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRER 245 (285)
Q Consensus 211 ~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~ 245 (285)
.....+..++.++.|+.|+.||.++++.+-.+..
T Consensus 470 -~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 470 -TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp -CEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred -eEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 0011234677789999999999999887766543
No 263
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.13 E-value=1.5e-05 Score=64.37 Aligned_cols=127 Identities=6% Similarity=-0.163 Sum_probs=90.3
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec----------CCCeEEEEecCC
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS----------DCGHLFIWKKKG 152 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----------~dg~v~vwd~~~ 152 (285)
+|.++|..+. +.+.++..... - .+.+ +|++++++.+. .++.|.+||+.+
T Consensus 47 ~vsvID~~t~----------------~v~~~i~vG~~---P-~i~~-spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 47 ENWVSCAGCG----------------VTLGHSLGAFL---S-LAVA-GHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp EEEEEETTTT----------------EEEEEEEECTT---C-EEEE-CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred eEEEEECCCC----------------eEEEEEeCCCC---C-ceEE-CCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 8889999887 67777765443 2 6887 99999988875 478999999999
Q ss_pred CceEEEEecc-------cccceEeEEcCCCCeEEEEec--CCcEEE--EcCCCCCCCCCCCCcccceeeccccCCCceEE
Q 023246 153 GKLVRLMVGD-------RHVVNQLEPHPHIPMFATCGI--EKTVKL--WAPMPTDFPPLPDNAEKIMKANKQGREDHSRI 221 (285)
Q Consensus 153 ~~~~~~~~~h-------~~~v~~~~~~p~~~~l~t~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (285)
++.+.++..+ ......++++|++++++.+.. +..+.+ +|+.+ +..+..... ..+ .....+.++
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~--~~~--~p~g~~~~~ 179 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASC--FHI--HPGAAATHY 179 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSC--CCC--EEEETTEEE
T ss_pred CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCc--eEE--ccCCCeEEE
Confidence 9999998643 134678999999999888874 457888 99866 222211000 001 112234567
Q ss_pred EeCCCCeEEEEEecc
Q 023246 222 TLTPDVIMHVLRLQR 236 (285)
Q Consensus 222 ~~s~d~~i~vwd~~~ 236 (285)
+.+.|+.+.+.++..
T Consensus 180 ~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 180 LGSCPASLAASDLAA 194 (368)
T ss_dssp CCCCTTSCEEEECCS
T ss_pred EEcCCCCEEEEECcc
Confidence 778888888888776
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.11 E-value=3.5e-05 Score=67.89 Aligned_cols=206 Identities=7% Similarity=-0.039 Sum_probs=111.4
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC-CEEEE-ecCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS-ELLIS-YNDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~-~~l~s-~~d~ 82 (285)
.+.+++|++.++.++++-...+.|+.+++...... . ....++.........|++.+.+ +++++ ...+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~-----~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~ 475 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------S-----SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 475 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------C-----CCCCBCCSCC--CCCEECCCSSSBCEECCTTTS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------c-----ceEEEEeCCCCCcceEEEEeeCCcEEEEeccCC
Confidence 35678998865445555556688888888751100 0 0001111111234567887544 55555 3578
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecC--CCeEEEEecCCCceEEEEe
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD--CGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~ 160 (285)
.|.++++... ....+.... ......+++ +|.+.+|+.+.. .+.|.++++........+.
T Consensus 476 ~I~v~d~dg~-----------------~~~~l~~~~-~~~P~giav-Dp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 476 TVSVADTKGV-----------------KRKTLFREQ-GSKPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp CEEEEBSSSC-----------------CEEEECCCS-SCCCCCEEC-CSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred eEEEEecCCC-----------------ceEEEEeCC-CCCcceEEE-ccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 8999998654 223332111 112567886 776555544432 3788888876332222222
Q ss_pred cccccceEeEEcCCCCeE-EEEecCCcEEEEcCCCCCCCCCCCC---cccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 161 GDRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPMPTDFPPLPDN---AEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 161 ~h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
..-...+.|+|+|++..| ++-...+.|..+++.+.....+... ......+.. ....++++-...+.|..++..+
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav--d~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE--ETTEEEEECSTTTCEEEEETTT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE--ECCEEEEEeCCCCeEEEEEccC
Confidence 223456789999976654 4444667899999876443222111 111111111 1235666777778888888665
Q ss_pred ccccee
Q 023246 237 RQTLAY 242 (285)
Q Consensus 237 ~~~~~~ 242 (285)
++.+..
T Consensus 615 G~~~~~ 620 (699)
T 1n7d_A 615 GSDVNL 620 (699)
T ss_dssp EEEEEC
T ss_pred CCceEE
Confidence 544433
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.09 E-value=0.002 Score=57.79 Aligned_cols=203 Identities=13% Similarity=0.115 Sum_probs=120.4
Q ss_pred CccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecC
Q 023246 2 NSIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND 81 (285)
Q Consensus 2 ~~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d 81 (285)
+...|.++...+++ .|-.|+.++-|..|+..+.......... ....-....|.++...++|.+.+...+
T Consensus 308 ~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~---------~~~~l~~~~V~~i~~d~~g~lWiGt~~ 376 (795)
T 4a2l_A 308 SQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFKNIRNIP---------YKNSLSDNVVSCIVEDKDKNLWIGTND 376 (795)
T ss_dssp SSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSEEECCCT---------TSSSCSCSSEEEEEECTTSCEEEEESS
T ss_pred CCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccceEEcCCC---------CCCCCCCCeeEEEEECCCCCEEEEECC
Confidence 34678899998865 4556777788899987655421110000 000112456999999999988777777
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc-------cCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCc
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-------RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGK 154 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 154 (285)
+-|..|+..++ ....+... -....|.++.. +++++.+..|+.++-|..||..+++
T Consensus 377 ~Gl~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 377 GGLNLYNPITQ-----------------RFTSYTLQEDESARGIGSNNIKAVYV-DEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp SCEEEECTTTC-----------------CEEEECCC------CCSCSCEEEEEE-ETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CCeEEEcCCCC-----------------cEEEEecCCCCcccCCCCccEEEEEE-cCCCCEEEEEeCcCceeEEeCCCCc
Confidence 77999988654 22222110 01123888886 7888845567776779999988776
Q ss_pred eEEEEe----cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCC-------CcccceeeccccCCCceEEEe
Q 023246 155 LVRLMV----GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-------NAEKIMKANKQGREDHSRITL 223 (285)
Q Consensus 155 ~~~~~~----~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 223 (285)
...... .+...|.++...+++.+.+... + -+..|+..++....+.. ....+..+. ....+.+.+ +
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~-~d~~g~lWi-g 514 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLF-RDSHKRLWI-G 514 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEE-ECTTCCEEE-E
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEE-ECCCCCEEE-E
Confidence 443221 1245788999888887655443 4 48888887665322211 112232322 122333444 4
Q ss_pred CCCCeEEEEEecccc
Q 023246 224 TPDVIMHVLRLQRRQ 238 (285)
Q Consensus 224 s~d~~i~vwd~~~~~ 238 (285)
+. +-+..|+..+..
T Consensus 515 t~-~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 515 GE-EGLSVFKQEGLD 528 (795)
T ss_dssp ES-SCEEEEEEETTE
T ss_pred eC-CceEEEeCCCCe
Confidence 44 557888876543
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.08 E-value=0.0023 Score=57.05 Aligned_cols=204 Identities=8% Similarity=-0.036 Sum_probs=115.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
.+.+++|++.+..++++-...+.|+.+++....... ....++.........|++.+.+. ++++- ..+
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-----------~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~ 493 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----------SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 493 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-----------ceeEEEecCCCCcceeeeeecCCcEEEEecCCC
Confidence 456788888654566666667788888876431100 00111122234567899998775 44443 488
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEEec-C-CCeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS-D-CGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~-~-dg~v~vwd~~~~~~~~~~ 159 (285)
.|.+.++... ....+. .... ....|++ +|...+|+... . .+.|.+.++........+
T Consensus 494 ~I~v~~ldG~-----------------~~~~l~~~~l~--~P~gIaV-Dp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 494 TVSVADTKGV-----------------KRKTLFRENGS--KPRAIVV-DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEEEETTSS-----------------SEEEEEECTTC--CEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred eEEEEeCCCC-----------------eEEEEEeCCCC--CcceEEE-ecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 9999998754 333332 2222 2788997 77655554433 2 378999998744443333
Q ss_pred ecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCCCCC---CcccceeeccccCCCceEEEeCCCCeEEEEEec
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~ 235 (285)
...-.....|++++.+..|..+. ....|...++.+.....+.. .....+.+.. ..+.++++-...+.|...+..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCC
Confidence 33335788999998777665554 45688999987665433211 1111122211 233456666666777777755
Q ss_pred ccccce
Q 023246 236 RRQTLA 241 (285)
Q Consensus 236 ~~~~~~ 241 (285)
+++.+.
T Consensus 632 tG~~~~ 637 (791)
T 3m0c_C 632 TGSDVN 637 (791)
T ss_dssp TCCCCE
T ss_pred CCcceE
Confidence 554433
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.04 E-value=0.0027 Score=50.25 Aligned_cols=180 Identities=9% Similarity=-0.046 Sum_probs=103.4
Q ss_pred CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCC
Q 023246 25 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSP 102 (285)
Q Consensus 25 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~ 102 (285)
...|+..++...... ..+.......+.++.|.+.+. ++.+- ..+.|..++....
T Consensus 12 ~~~I~~i~l~~~~~~--------------~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~---------- 67 (318)
T 3sov_A 12 RRDLRLVDATNGKEN--------------ATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT---------- 67 (318)
T ss_dssp EEEEEEEETTCTTSC--------------CEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS----------
T ss_pred cCeEEEEECCCCceE--------------EEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCC----------
Confidence 467888888755310 000011123567899998654 55553 4788999998764
Q ss_pred ccccCCCCc-eEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEE
Q 023246 103 EDLQKREEP-QVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 180 (285)
Q Consensus 103 ~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t 180 (285)
... ..+...-.. ...+++ ++ .+++.++-...+.|.++++........+.........++++|.+..|..
T Consensus 68 ------~~~~~~~~~~l~~--p~glav-d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 68 ------ESVQNVVVSGLLS--PDGLAC-DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp ------SCCCEEEEECCSC--CCEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEE
T ss_pred ------CceEEEEcCCCCC--ccEEEE-EcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 111 122221112 567886 65 5556666667789999998754433333334456789999987655444
Q ss_pred Ee--cCCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 181 CG--IEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 181 ~~--~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
+. ..+.|...++.+.....+. ........+........++++-+..+.|..+++...
T Consensus 139 td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 139 TDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 44 3577888887754432221 111112222222234456667677788888887653
No 268
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.01 E-value=0.0039 Score=55.88 Aligned_cols=202 Identities=7% Similarity=0.045 Sum_probs=118.4
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
...|.++...+++ . |..|+.+ -|.+||..+++......... ....-....|.++...++|.+-++..++
T Consensus 262 ~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~--------~~~~l~~~~i~~i~~D~~g~lWigt~~~ 330 (795)
T 4a2l_A 262 SNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNPV--------ENGSLSQRSVRSIFMDSQGGMWLGTYFG 330 (795)
T ss_dssp CSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCTT--------STTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred CCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCCC--------CCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence 4568899988865 4 4445555 58889987665321110000 0001234579999999999987777777
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc-----cCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-----RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
-|..|+.... ....+... -....|.++.. ++++++.+ |+.++-|..|+..+++...
T Consensus 331 Gl~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~V~~i~~-d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~ 391 (795)
T 4a2l_A 331 GLNYYHPIRN-----------------RFKNIRNIPYKNSLSDNVVSCIVE-DKDKNLWI-GTNDGGLNLYNPITQRFTS 391 (795)
T ss_dssp CEEEECGGGG-----------------SSEEECCCTTSSSCSCSSEEEEEE-CTTSCEEE-EESSSCEEEECTTTCCEEE
T ss_pred CeEEeCCCcc-----------------cceEEcCCCCCCCCCCCeeEEEEE-CCCCCEEE-EECCCCeEEEcCCCCcEEE
Confidence 7888887654 12222110 01123888885 77776554 6667779999988765443
Q ss_pred EEec--------ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCC-----CcccceeeccccCCCceEEEeC
Q 023246 158 LMVG--------DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-----NAEKIMKANKQGREDHSRITLT 224 (285)
Q Consensus 158 ~~~~--------h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s 224 (285)
.... ....|.++...++++.|..|..++-|..|+..++....+.. ....+..+.. ...+.+.+ ++
T Consensus 392 ~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~lwi-gt 469 (795)
T 4a2l_A 392 YTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILP-DGEGNLWL-GT 469 (795)
T ss_dssp ECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEE-CSSSCEEE-EE
T ss_pred EecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEE-CCCCCEEE-Ee
Confidence 2211 13568899988888845556666679999988765433221 1222333322 22333333 44
Q ss_pred CCCeEEEEEeccc
Q 023246 225 PDVIMHVLRLQRR 237 (285)
Q Consensus 225 ~d~~i~vwd~~~~ 237 (285)
. +-+..|+..++
T Consensus 470 ~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 470 L-SALVRFNPEQR 481 (795)
T ss_dssp S-SCEEEEETTTT
T ss_pred c-CceeEEeCCCC
Confidence 4 45777876543
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.00 E-value=0.00047 Score=61.38 Aligned_cols=117 Identities=9% Similarity=-0.012 Sum_probs=74.4
Q ss_pred CCCCc-ceEEEEEe-cCCCEEEEec--C----CcEEEEEcCCC-CCCCCCCCCCccccCCCCceEeecccCceeeeeEEE
Q 023246 58 GKNNI-HITGLAYS-NTSELLISYN--D----ELVYLFEKNMG-LGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 128 (285)
Q Consensus 58 ~~h~~-~v~~i~~s-~~~~~l~s~~--d----~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 128 (285)
.+|.. .+...+|| |||++|+-+. + .+|+++|+.++ . .....+.. ....+.|
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~---------------~l~~~~~~-----~~~~~~W 228 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ---------------TIADKVSG-----TNGEIVW 228 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC---------------CCCCCEEE-----ECSCCEE
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE---------------eCCccccC-----ceeeEEE
Confidence 34443 67889999 9999777532 2 24999999765 2 11111111 1345664
Q ss_pred ecCCCcEEEEecCC-----CeEEEEecCCCce--EEEEe-cccccceEeEEcCCCCeEEEEec---CCcEEEEcCCCC
Q 023246 129 FGPNDEYVMSGSDC-----GHLFIWKKKGGKL--VRLMV-GDRHVVNQLEPHPHIPMFATCGI---EKTVKLWAPMPT 195 (285)
Q Consensus 129 ~~~~~~~l~~~~~d-----g~v~vwd~~~~~~--~~~~~-~h~~~v~~~~~~p~~~~l~t~~~---d~~i~iwd~~~~ 195 (285)
+|+++.|+....+ ..|+++++.+++. ...+. .+......+.|+|++++|+..+. ...|.++|+.++
T Consensus 229 -spDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 229 -GPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp -CSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred -ecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 9999877766554 3688888877642 22332 22234567899999999776553 346888888764
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.00 E-value=0.0042 Score=50.84 Aligned_cols=184 Identities=11% Similarity=0.012 Sum_probs=105.3
Q ss_pred CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCC
Q 023246 25 DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSP 102 (285)
Q Consensus 25 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~ 102 (285)
...|+..++...... .+ ......+..++|++.+. ++.+. ..+.|+.+++.....
T Consensus 91 ~~~I~~i~l~~~~~~---------------~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~-------- 146 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYT---------------SL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-------- 146 (400)
T ss_dssp TTEEEEECTTSCSCE---------------EE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------
T ss_pred cceeEEEccCCccee---------------Ee-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC--------
Confidence 467888887755311 11 12244678999998665 44453 478899998865200
Q ss_pred ccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEE
Q 023246 103 EDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATC 181 (285)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~ 181 (285)
.......+..... ....+++ ++ .+++.++-...+.|.+.++........+.........|+++|.+..|...
T Consensus 147 ----~~~~~~~~~~~~~--~p~glav-D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 147 ----VSSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp -----CCCEEEECSSCS--CEEEEEE-ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEE
T ss_pred ----CCcceEEEeCCCC--CcccEEE-EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEE
Confidence 0011122221222 2677887 65 56666666778899999998555444444344567899999976655444
Q ss_pred e-c-CCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 182 G-I-EKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 182 ~-~-d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
. . .+.|...++.+.....+. ........+.......+++++-+....|..+|+.....
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred eCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 3 2 367888888765432221 11112222222223445666667778888888765433
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=0.00075 Score=55.90 Aligned_cols=153 Identities=13% Similarity=0.179 Sum_probs=93.4
Q ss_pred eeEEEEcC-CCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEec-CC
Q 023246 6 LNAIVIDP-RNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISYN-DE 82 (285)
Q Consensus 6 v~~~~~s~-~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~~-d~ 82 (285)
-..++++| ++ ..|+.+...+.|+.+|+..+... .+ .........++|+++++ ++++.. ++
T Consensus 139 P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~---------------~~-~~~~~~P~~ia~d~~G~~lyvad~~~~ 201 (430)
T 3tc9_A 139 AVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVS---------------TV-YSGLSKVRTICWTHEADSMIITNDQNN 201 (430)
T ss_dssp CCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEE---------------EE-ECCCSCEEEEEECTTSSEEEEEECCSC
T ss_pred CCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEE---------------EE-ecCCCCcceEEEeCCCCEEEEEeCCCC
Confidence 45789998 34 34444444488888998765421 11 11234678999999998 445532 22
Q ss_pred ----cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEE
Q 023246 83 ----LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 83 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
.+.+++..... .....+.... ....+++ +| ++.++++-...+.|+.++...+....
T Consensus 202 ~~~~~v~~~~~~g~~---------------~~~~~l~~~~---~p~giav-dp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 202 NDRPNNYILTRESGF---------------KVITELTKGQ---NCNGAET-HPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp TTSEEEEEEEGGGTS---------------CSEEEEEECS---SCCCEEE-CTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccceEEEEeCCCce---------------eeeeeeccCC---CceEEEE-eCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 34444443220 1112332221 2567886 88 77777777778999999998665422
Q ss_pred EEec-ccccceEeEEcCCCCe-EEEEecCCcEEEEcCCC
Q 023246 158 LMVG-DRHVVNQLEPHPHIPM-FATCGIEKTVKLWAPMP 194 (285)
Q Consensus 158 ~~~~-h~~~v~~~~~~p~~~~-l~t~~~d~~i~iwd~~~ 194 (285)
.... .......++|+|++++ +++-...+.|..++...
T Consensus 263 ~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 263 LFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 2221 2245778999999995 44445677899987653
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.97 E-value=0.00069 Score=58.38 Aligned_cols=133 Identities=12% Similarity=0.083 Sum_probs=78.7
Q ss_pred CCC---cEEEEecCCCeEEEEecCCCceEEEEeccc-------------cc-----------------------------
Q 023246 131 PND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HV----------------------------- 165 (285)
Q Consensus 131 ~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-------------~~----------------------------- 165 (285)
.++ ..++.++.+|.++++|.++|+.+....... .+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~G 410 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLG 410 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTC
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCcc
Confidence 456 378889999999999999999987665321 00
Q ss_pred ---ceEeEEcCCCCeEEEEe---------------------------------cCCcEEEEcCCCCCCC-CCCCCcccce
Q 023246 166 ---VNQLEPHPHIPMFATCG---------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIM 208 (285)
Q Consensus 166 ---v~~~~~~p~~~~l~t~~---------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~ 208 (285)
-..++++|+...+.... .+|.|..||+.++++. +.... ....
T Consensus 411 g~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~ 489 (582)
T 1flg_A 411 GKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLW 489 (582)
T ss_dssp SSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCC
T ss_pred ccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCc
Confidence 01346677655544432 2578889999887642 21111 0110
Q ss_pred eeccccCCCceEEEeCCCCeEEEEEecccccceeEeeecccccc-CCCCCcCeEEEee
Q 023246 209 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADF-ESDEEEGETYLLG 265 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~ 265 (285)
.. .....+.+++.++.|+.++.||.++++.+-.+........- ...+.+|+.|+.-
T Consensus 490 ~g-~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 490 AG-VLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp SC-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred cc-ceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 00 00112447777999999999999999887665432211111 1112456677664
No 273
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.96 E-value=0.0075 Score=52.43 Aligned_cols=183 Identities=9% Similarity=-0.074 Sum_probs=106.1
Q ss_pred CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCE-EEEe-cCCcEEEEEcCCCCCCCCCCCC
Q 023246 24 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSEL-LISY-NDELVYLFEKNMGLGPSPLSLS 101 (285)
Q Consensus 24 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~ 101 (285)
..+.|+..++.+.... ..+....-..+..++|++.+.. +.+. .++.|..+++...
T Consensus 13 ~~~~I~~i~l~~~~~~--------------~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--------- 69 (628)
T 4a0p_A 13 RRADIRRISLETNNNN--------------VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS--------- 69 (628)
T ss_dssp ETTEEEEEESSCTTCE--------------EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------
T ss_pred eCCcEEEEECCCCCcc--------------eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---------
Confidence 5678999999755311 1111112345789999997654 4443 4889999988754
Q ss_pred CccccCCCCceEeecccCceeeeeEEEecCC-CcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEE
Q 023246 102 PEDLQKREEPQVYSGHRNSQTVKGVNFFGPN-DEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFAT 180 (285)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t 180 (285)
.....+..... ....+++ ++. +++.++-...+.|.+.++........+...-.....++++|....|..
T Consensus 70 -------~~~~v~~~g~~--~P~GlAv-D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~ 139 (628)
T 4a0p_A 70 -------ALEHVVEFGLD--YPEGMAV-DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYW 139 (628)
T ss_dssp -------SCEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEE
T ss_pred -------CcEEEEeCCCC--CcceEEE-EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEE
Confidence 22222222212 2667887 654 555566666789999998754433333233456789999996555444
Q ss_pred Ee--cCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEeccccc
Q 023246 181 CG--IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 181 ~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
.. ..+.|...++.+.....+.........+.......+++++-...+.|...++.....
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred eCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 43 356788788776554322211222222222222345666667778888888765433
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.96 E-value=0.0012 Score=54.70 Aligned_cols=152 Identities=13% Similarity=0.107 Sum_probs=91.4
Q ss_pred eeEEEEcCC--CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecC--
Q 023246 6 LNAIVIDPR--NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYND-- 81 (285)
Q Consensus 6 v~~~~~s~~--~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d-- 81 (285)
-..++|+|+ ++++++ +...+.|+.+|..+++.. .+ .........++|+++|+++++...
T Consensus 141 P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~---------------~~-~~~~~~P~giavd~dG~lyVad~~~~ 203 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVD---------------IK-TTNIGQCADVNFTLNGDMVVVDDQSS 203 (433)
T ss_dssp CCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEE---------------EE-CCCCSCEEEEEECTTCCEEEEECCSC
T ss_pred CceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEE---------------Ee-ecCCCCccEEEECCCCCEEEEcCCCC
Confidence 457899984 334444 443389999998776521 11 112345889999999996666432
Q ss_pred --C-cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEE
Q 023246 82 --E-LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVR 157 (285)
Q Consensus 82 --~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~ 157 (285)
. .+...+..... .....+.. .. ....+++ ++ ++.+.++-..++.|+.+|..++....
T Consensus 204 ~~~~gv~~~~~~~~~---------------~~~~~~~~-~~--~P~giav-d~~~G~lyv~d~~~~~V~~~d~~~g~~~~ 264 (433)
T 4hw6_A 204 DTNTGIYLFTRASGF---------------TERLSLCN-AR--GAKTCAV-HPQNGKIYYTRYHHAMISSYDPATGTLTE 264 (433)
T ss_dssp TTSEEEEEECGGGTT---------------CCEEEEEE-CS--SBCCCEE-CTTTCCEEECBTTCSEEEEECTTTCCEEE
T ss_pred cccceEEEEECCCCe---------------eccccccc-cC--CCCEEEE-eCCCCeEEEEECCCCEEEEEECCCCeEEE
Confidence 1 23333332210 10112221 11 1566776 88 67777776778899999998777633
Q ss_pred EEec--ccccceEeEEcCCCCeE-EEEecCCcEEEEcCC
Q 023246 158 LMVG--DRHVVNQLEPHPHIPMF-ATCGIEKTVKLWAPM 193 (285)
Q Consensus 158 ~~~~--h~~~v~~~~~~p~~~~l-~t~~~d~~i~iwd~~ 193 (285)
.+.. ....-..++|+|++++| ++-...+.|+.+++.
T Consensus 265 ~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 265 EEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 3321 12223469999999954 444556789997765
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.93 E-value=0.0044 Score=48.94 Aligned_cols=181 Identities=11% Similarity=0.020 Sum_probs=101.5
Q ss_pred CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCCc
Q 023246 26 EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPE 103 (285)
Q Consensus 26 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~ 103 (285)
..|+..|+.+.+.. ..+ .....+..++|++.+. ++.+. ..+.|..+++.....
T Consensus 10 ~~I~~i~~~~~~~~--------------~~~--~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~--------- 64 (316)
T 1ijq_A 10 HEVRKMTLDRSEYT--------------SLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG--------- 64 (316)
T ss_dssp SSEEEEETTSCCCE--------------EEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------
T ss_pred CeEEEEECCCcceE--------------ehh--cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC---------
Confidence 57888998866421 111 1234578999998765 44554 478999999875100
Q ss_pred cccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe
Q 023246 104 DLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG 182 (285)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~ 182 (285)
.......+..... ....+++ ++ .+++.++-...+.|.++++........+.........++++|.+..|..+.
T Consensus 65 ---~~~~~~~~~~~~~--~p~glav-d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 65 ---VSSYDTVISRDIQ--APDGLAV-DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ------CEEEECSSCS--CCCEEEE-ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred ---CcccEEEEeCCCC--CcCEEEE-eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 0011112221111 2567886 65 455556666788999999874433333333345678999999666544444
Q ss_pred c-C-CcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 183 I-E-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 183 ~-d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
. . +.|...++.+.....+. ........+.......+++++-+..+.|..+|+...
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 3 3 67888887654322211 111112222222234456667777788999988653
No 276
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.93 E-value=0.0018 Score=55.86 Aligned_cols=134 Identities=12% Similarity=0.081 Sum_probs=77.8
Q ss_pred CCC---cEEEEecCCCeEEEEecCCCceEEEEeccc-------------ccc--------------------------eE
Q 023246 131 PND---EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR-------------HVV--------------------------NQ 168 (285)
Q Consensus 131 ~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-------------~~v--------------------------~~ 168 (285)
.++ ..++.++.+|.++++|.++|+.+....... .++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 467 567778999999999999999987654211 011 24
Q ss_pred eEEcCCCCeEEEEe---------------------------------------cCCcEEEEcCCCCCCC-CCCCCcccce
Q 023246 169 LEPHPHIPMFATCG---------------------------------------IEKTVKLWAPMPTDFP-PLPDNAEKIM 208 (285)
Q Consensus 169 ~~~~p~~~~l~t~~---------------------------------------~d~~i~iwd~~~~~~~-~~~~~~~~~~ 208 (285)
++++|+..++.... .+|.|..||+.++++. +.. ...+..
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~ 476 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVW 476 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCC
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCcc
Confidence 56777665544321 3467888888777631 111 000000
Q ss_pred eeccccCCCceEEEeCCCCeEEEEEecccccceeEeeecccccc-CCCCCcCeEEEeec
Q 023246 209 KANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYRERRYNAADF-ESDEEEGETYLLGF 266 (285)
Q Consensus 209 ~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~ 266 (285)
.- .....+.+++.++.|+.++.||.++++.+-.+........- ...+.+|++|+.-.
T Consensus 477 ~g-~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 477 GG-TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp SB-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred Cc-ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 00 00112446777999999999999999877665432211111 11134567777643
No 277
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.92 E-value=0.00075 Score=59.24 Aligned_cols=202 Identities=10% Similarity=0.057 Sum_probs=113.7
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPS 96 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~ 96 (285)
..+++++.++.|.-+|..+++.+.......+..... ... ... .-..+++. ++..++.+.|+.|..+|..++
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~-~~~-~~~--~~~~~~~~-~~~v~v~~~dg~l~alD~~tG---- 137 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKAR-TSC-CDA--VNRGVALW-GDKVYVGTLDGRLIALDAKTG---- 137 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGG-GCT-TCS--CCCCCEEE-BTEEEEECTTSEEEEEETTTC----
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccc-ccc-ccC--CccceEEE-CCEEEEEcCCCEEEEEECCCC----
Confidence 467777888999999999998655443322211000 000 000 00112221 344444456999999999888
Q ss_pred CCCCCCccccCCCCceEeecccCc--eeeee-EEEecCCCcEEEEecC------CCeEEEEecCCCceEEEEeccc-c--
Q 023246 97 PLSLSPEDLQKREEPQVYSGHRNS--QTVKG-VNFFGPNDEYVMSGSD------CGHLFIWKKKGGKLVRLMVGDR-H-- 164 (285)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~-~~~~~~~~~~l~~~~~------dg~v~vwd~~~~~~~~~~~~h~-~-- 164 (285)
+.+-.+...... ..+.+ ... .++ .++.+.. +|.|+.+|.++|+.+..+.... .
T Consensus 138 ------------~~~W~~~~~~~~~~~~~~~~P~v--~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~ 202 (668)
T 1kv9_A 138 ------------KAIWSQQTTDPAKPYSITGAPRV--VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPA 202 (668)
T ss_dssp ------------CEEEEEECSCTTSSCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTT
T ss_pred ------------CEeeeeccCCCCCcceecCCCEE--ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCC
Confidence 455444432110 00111 111 134 4444433 5899999999999998775210 0
Q ss_pred ----------------------------cceEeEEcCCCCeEEEEecCC-------------------cEEEEcCCCCCC
Q 023246 165 ----------------------------VVNQLEPHPHIPMFATCGIEK-------------------TVKLWAPMPTDF 197 (285)
Q Consensus 165 ----------------------------~v~~~~~~p~~~~l~t~~~d~-------------------~i~iwd~~~~~~ 197 (285)
....++++|....++.+..++ .|..+|++++++
T Consensus 203 ~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~ 282 (668)
T 1kv9_A 203 LPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL 282 (668)
T ss_dssp SCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE
T ss_pred ccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce
Confidence 112467888888877777665 388999988874
Q ss_pred C---CCCCCc-------ccceeeccccCCC---ceEEEeCCCCeEEEEEecccccceeE
Q 023246 198 P---PLPDNA-------EKIMKANKQGRED---HSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 198 ~---~~~~~~-------~~~~~~~~~~~~~---~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
. +...+. .+.+.... ..++ ..++.++.+|.++++|..+++.+...
T Consensus 283 ~W~~~~~~~~~wd~~~~~~~~~~d~-~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 283 AWHYQVTPGDSWDFTATQQITLAEL-NIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEESSTTCCSCCCCCSCEEEEEE-EETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eeEeecCCCccccccCCCCcEEEEe-ccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 1 121111 11111100 0112 26888999999999999988776443
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0035 Score=56.13 Aligned_cols=198 Identities=8% Similarity=0.003 Sum_probs=113.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
...|.++...+++ .|..|+.++-|..|+..+++.... ... .......|.++...+++.+.+...++
T Consensus 362 ~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~----------~~~--~~~~~~~v~~i~~d~~g~lWigt~~~ 427 (781)
T 3v9f_A 362 NKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIYN----------KEN--RELLSNSVLCSLKDSEGNLWFGTYLG 427 (781)
T ss_dssp SSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEECC-----------------CCCSBEEEEEECTTSCEEEEETTE
T ss_pred CcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEEc----------cCC--CCCCCcceEEEEECCCCCEEEEeccC
Confidence 4568888888864 455667667788899875542111 000 01234579999998888887766667
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeec-ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
-|..++..++ ....+.. ......|.++.. ++++++.+.. . +-|..+|..+++.......
T Consensus 428 Gl~~~~~~~~-----------------~~~~~~~~~~~~~~v~~i~~-d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 428 NISYYNTRLK-----------------KFQIIELEKNELLDVRVFYE-DKNKKIWIGT-H-AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp EEEEECSSSC-----------------EEEECCSTTTCCCCEEEEEE-CTTSEEEEEE-T-TEEEEEESSSSSCCEEECT
T ss_pred CEEEEcCCCC-----------------cEEEeccCCCCCCeEEEEEE-CCCCCEEEEE-C-CceEEEeCCCCeEEecccC
Confidence 7888887654 2222221 011123888875 7777765544 3 5688999887665433222
Q ss_pred c-----cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCC----CcccceeeccccCCCceEEEeCCCCeEEEE
Q 023246 162 D-----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD----NAEKIMKANKQGREDHSRITLTPDVIMHVL 232 (285)
Q Consensus 162 h-----~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~s~d~~i~vw 232 (285)
. ...|.++...+++.+.+.....| +..|+.....+..+.. ....+..+. ....+. +..++.+|.+..|
T Consensus 488 ~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~-~d~~g~-lWi~T~~Glv~~~ 564 (781)
T 3v9f_A 488 SNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIY-RSSKGQ-MWLATGEGLVCFP 564 (781)
T ss_dssp TTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEE-ECTTSC-EEEEETTEEEEES
T ss_pred cccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEE-ECCCCC-EEEEECCCceEEE
Confidence 2 35788999998887655433344 7778887654322211 112222222 122333 3344446654777
Q ss_pred Eeccc
Q 023246 233 RLQRR 237 (285)
Q Consensus 233 d~~~~ 237 (285)
|..+.
T Consensus 565 d~~~~ 569 (781)
T 3v9f_A 565 SARNF 569 (781)
T ss_dssp CTTTC
T ss_pred CCCCC
Confidence 76554
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.01 Score=51.62 Aligned_cols=198 Identities=9% Similarity=-0.037 Sum_probs=116.2
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
...+++|++.++.++.+-..++.|+.+++...... .+...-......+++.+.+. ++++- ..+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~---------------~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALE---------------HVVEFGLDYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---------------EEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE---------------EEEeCCCCCcceEEEEeCCCEEEEEECCCC
Confidence 45689999976566666667888888888644211 11111123466889987665 44553 478
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEEec--CCCeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~ 159 (285)
.|.+.++... ....+. ..- ....++++ +|...+|+... ..+.|...++...... .+
T Consensus 103 ~I~v~~~dG~-----------------~~~~l~~~~l--~~P~~iav-dp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l 161 (628)
T 4a0p_A 103 RIEVSKLDGQ-----------------HRQVLVWKDL--DSPRALAL-DPAEGFMYWTEWGGKPKIDRAAMDGSERT-TL 161 (628)
T ss_dssp EEEEEETTST-----------------TCEEEECSSC--CCEEEEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCE-EE
T ss_pred EEEEEecCCC-----------------cEEEEEeCCC--CCcccEEE-ccCCCeEEEeCCCCCCEEEEEeCCCCceE-EE
Confidence 8999998754 223332 222 22678887 77544444433 3578888888744433 33
Q ss_pred ecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCCCeEEEEEecccc
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~ 238 (285)
...-.....|++++++..|..+. ..+.|...++.+.....+.........+.. ..+.++++-...+.|...|..+++
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav--~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ--YQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEE--ETTEEEEEETTTTEEEEEETTTCC
T ss_pred ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEE--ECCEEEEecCCCCEEEEEECCCCC
Confidence 33445678999999877655554 567899999876543222111111122211 124455666667777777755554
Q ss_pred cc
Q 023246 239 TL 240 (285)
Q Consensus 239 ~~ 240 (285)
..
T Consensus 240 ~~ 241 (628)
T 4a0p_A 240 NR 241 (628)
T ss_dssp SC
T ss_pred ce
Confidence 33
No 280
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.85 E-value=0.00068 Score=59.48 Aligned_cols=55 Identities=9% Similarity=-0.013 Sum_probs=42.9
Q ss_pred CCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 142 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 142 dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
+|.|..||+.+++.+.....+ ..+....+...+.+++.++.|+.++.||.+++++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 488999999999998877643 3344444555677888899999999999988774
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.85 E-value=0.0051 Score=46.83 Aligned_cols=166 Identities=9% Similarity=0.087 Sum_probs=97.7
Q ss_pred CCCCcceEEEEEecCCCEEEE-e-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcE
Q 023246 58 GKNNIHITGLAYSNTSELLIS-Y-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEY 135 (285)
Q Consensus 58 ~~h~~~v~~i~~s~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 135 (285)
.+-...+..++|+|++..|.+ . .++.|...|.. + +.++.+.-... ...-.+++ .+++.+
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g----------------~v~~~i~l~g~-~D~EGIa~-~~~g~~ 83 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G----------------DLIRTIPLDFV-KDLETIEY-IGDNQF 83 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C----------------CEEEEEECSSC-SSEEEEEE-CSTTEE
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C----------------CEEEEEecCCC-CChHHeEE-eCCCEE
Confidence 344557999999998764444 4 48889999987 4 45555532110 12677887 788888
Q ss_pred EEEecCCCeEEEEecCCCce---EEEEe------cccccceEeEEcCCCCeEEEEecCCcEEEEcCCCC----CCCCCCC
Q 023246 136 VMSGSDCGHLFIWKKKGGKL---VRLMV------GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT----DFPPLPD 202 (285)
Q Consensus 136 l~~~~~dg~v~vwd~~~~~~---~~~~~------~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~----~~~~~~~ 202 (285)
+++.-.++.+.++++..... +.... ..+.....|+|+|.++.|.++.+.....+|..+.. .+..+..
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD 163 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecc
Confidence 77766778999998765432 22221 12345689999999988777776555555555421 1100000
Q ss_pred -------CcccceeeccccCCCceEEEeCCCCeEEEEEecccccceeE
Q 023246 203 -------NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRRQTLAYR 243 (285)
Q Consensus 203 -------~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~~~~~~~ 243 (285)
.....-.+......+.+++....+..+.++|.+.. .+..+
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~ 210 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEM 210 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEE
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEE
Confidence 00011111112223456666677788888885543 44443
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.84 E-value=0.0014 Score=54.92 Aligned_cols=162 Identities=15% Similarity=0.235 Sum_probs=93.1
Q ss_pred eeEEEEcCC-CCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEE-------ecCCC-EE
Q 023246 6 LNAIVIDPR-NPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAY-------SNTSE-LL 76 (285)
Q Consensus 6 v~~~~~s~~-~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~-------s~~~~-~l 76 (285)
-..|+|+|. +.+++++-...+.|++.|+..+.+.... ............|+| +++++ ++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~------------~~~~~~~~~p~~ia~~~~~~~~d~~G~~ly 208 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPL------------NINTIPTNRIRSIAFNKKIEGYADEAEYMI 208 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEE------------CCTTSSCSBEEEEEECCCBTTTBCTTCEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEE------------ccCccccCCCcEEEEeecccccCCCCCEEE
Confidence 457899983 4456665555577888888876532111 010112346889999 99998 44
Q ss_pred EEec-CC------cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEE
Q 023246 77 ISYN-DE------LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 77 ~s~~-d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vw 148 (285)
++.. ++ .|.+++..... . +........+.... ....+++ +| ++.++++-...+.|+.+
T Consensus 209 vad~~~~~~~~~~~V~~i~r~~~G-----~-----~~~~~~~~~v~~~~---~p~giav-dp~~g~LYvtd~~~g~V~r~ 274 (496)
T 3kya_A 209 VAIDYDGKGDESPSVYIIKRNADG-----T-----FDDRSDIQLIAAYK---QCNGATI-HPINGELYFNSYEKGQVFRL 274 (496)
T ss_dssp EEECCCTTGGGEEEEEEEECCTTS-----C-----CSTTSCEEEEEEES---CCCCEEE-CTTTCCEEEEETTTTEEEEE
T ss_pred EEeCCCCCcccCceEEEEecCCCC-----c-----eeecccceeeccCC---CceEEEE-cCCCCeEEEEECCCCEEEEE
Confidence 4433 31 26666643310 0 00000002222222 1456776 77 56666777788999999
Q ss_pred ecC-------CCce-----------EEEE-e-cccccceEeEEcCCCCeEE-EEecCCcEEEEcCC
Q 023246 149 KKK-------GGKL-----------VRLM-V-GDRHVVNQLEPHPHIPMFA-TCGIEKTVKLWAPM 193 (285)
Q Consensus 149 d~~-------~~~~-----------~~~~-~-~h~~~v~~~~~~p~~~~l~-t~~~d~~i~iwd~~ 193 (285)
|+. ++.. ...+ . ........++|+|++++|. +-.....|+.+++.
T Consensus 275 d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 275 DLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 987 5543 2222 1 2234567899999999644 44456788886653
No 283
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.82 E-value=0.013 Score=50.86 Aligned_cols=199 Identities=9% Similarity=-0.040 Sum_probs=111.7
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC-EEEEe-cCC
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-LLISY-NDE 82 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-~l~s~-~d~ 82 (285)
...+++|++.++.++.+=...+.|..+++..... ...+...--.....+++.+.+. ++++. ..+
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~--------------~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~ 106 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--------------VQNVVVSGLLSPDGLACDWLGEKLYWTDSETN 106 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------CEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc--------------eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCC
Confidence 3568899986645555555567788888764320 0111111224678999999665 44553 488
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEEec--CCCeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMSGS--DCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~ 159 (285)
.|.+.++... ....+. ..-. ...++++ +|.+.+|+... ..+.|...++.........
T Consensus 107 ~I~v~~~dG~-----------------~~~~l~~~~l~--~P~~Iav-dp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 107 RIEVSNLDGS-----------------LRKVLFWQELD--QPRAIAL-DPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEEETTSC-----------------SCEEEECSSCS--CCCCEEE-ETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEECCCC-----------------CEEEEEeCCCC--CCceEEE-ecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 9999998764 333333 2222 2678887 77654444433 3467887887643333333
Q ss_pred ecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCCCCCCCCCC-CcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 160 VGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
...-...+.|++++++..|..+. ..+.|...++.+.....+.. .......+.. ..+.++++-...+.|...|..++
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~--~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL--FEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEE--SSSEEEEECTTTCSEEEEESSSC
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEE--eCCEEEEecCCCCEEEEEECCCC
Confidence 33345678999999766655554 56789999987654332211 1111112211 22345666666777888876655
Q ss_pred cc
Q 023246 238 QT 239 (285)
Q Consensus 238 ~~ 239 (285)
+.
T Consensus 245 ~~ 246 (619)
T 3s94_A 245 EG 246 (619)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 284
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.014 Score=52.31 Aligned_cols=209 Identities=9% Similarity=-0.015 Sum_probs=114.8
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccc-cccccCCCCCcceEEEEEecCCCEEEEecC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTF-CPRHLIGKNNIHITGLAYSNTSELLISYND 81 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d 81 (285)
...|.++...+++ .|..|+..+-|.++|..+++....... ....+ .......-....|.++...++|.+-++..+
T Consensus 257 ~~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~--~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPEQI--RFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTS--EEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBS
T ss_pred CceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeeecc--ccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecC
Confidence 4568888888864 555677656788899876653211000 00000 000000123457999999999987776667
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec--------ccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCC
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG--------HRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGG 153 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 153 (285)
+-|..++.... ....+.. .-....|.++.. ++++++. .|+.++-|..|+..++
T Consensus 333 ~Gl~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~v~~i~~-d~~g~lW-igt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 333 GGINFISNAPP-----------------TFHTWSYSPTQMNESSLSNKVVSSVCD-DGQGKLW-IGTDGGGINVFENGKR 393 (781)
T ss_dssp SCEEEECSSCC-----------------SCEEEC----CCCSSCCSSSCEEEEEE-CTTSCEE-EEEBSSCEEEEETTEE
T ss_pred CeEEEeCCCCC-----------------cceeeccCccccccCCCCCcceEEEEE-cCCCCEE-EEeCCCcEEEEECCCC
Confidence 77888887654 2222211 001123888875 7777655 4565666888887654
Q ss_pred ceEEEE---ecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCC---CcccceeeccccCCCceEEEeCCCC
Q 023246 154 KLVRLM---VGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD---NAEKIMKANKQGREDHSRITLTPDV 227 (285)
Q Consensus 154 ~~~~~~---~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~d~ 227 (285)
+..... ......|.++...+++.+.+ |..++-+..++..+++...+.. ....+..+.. ...+ .+..++. +
T Consensus 394 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~-d~~g-~lwigt~-~ 469 (781)
T 3v9f_A 394 VAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYE-DKNK-KIWIGTH-A 469 (781)
T ss_dssp EEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEE-CTTS-EEEEEET-T
T ss_pred eEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEE-CCCC-CEEEEEC-C
Confidence 322111 11235788998888877654 5555668889887665433321 1223333321 2223 3444444 5
Q ss_pred eEEEEEecccc
Q 023246 228 IMHVLRLQRRQ 238 (285)
Q Consensus 228 ~i~vwd~~~~~ 238 (285)
-|..++..+.+
T Consensus 470 Gl~~~~~~~~~ 480 (781)
T 3v9f_A 470 GVFVIDLASKK 480 (781)
T ss_dssp EEEEEESSSSS
T ss_pred ceEEEeCCCCe
Confidence 68888876543
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.79 E-value=0.00082 Score=59.24 Aligned_cols=160 Identities=11% Similarity=-0.008 Sum_probs=89.1
Q ss_pred ceEEEEEecCCCEEEEe--cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecC-CCcEEEEe
Q 023246 63 HITGLAYSNTSELLISY--NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGP-NDEYVMSG 139 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~ 139 (285)
.+..++|.+.+..|..+ ..+.|+.+++...... ......+.... .....+++ ++ .++++++-
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------------~~~~~~i~~~~--~~P~glav-D~~~g~LY~tD 471 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------SSYDTVISRDI--QAPDGLAV-DWIHSNIYWTD 471 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------------CCCCCBCCSCC----CCCEEC-CCSSSBCEECC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------------cceEEEEeCCC--CCcceEEE-EeeCCcEEEEe
Confidence 45678999876655443 4788999998751000 01111111111 11456776 64 45555555
Q ss_pred cCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe-cC-CcEEEEcCCCCCCCCCC-CCcccceeeccccCC
Q 023246 140 SDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IE-KTVKLWAPMPTDFPPLP-DNAEKIMKANKQGRE 216 (285)
Q Consensus 140 ~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~-~d-~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~ 216 (285)
...+.|.++++........+.........++++|.+.+|+.+. .. +.|..+++.+.....+. ........+.+....
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS 551 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTT
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccC
Confidence 6678999999875444333333335678899999766544443 22 67888887654432221 111112222222234
Q ss_pred CceEEEeCCCCeEEEEEeccc
Q 023246 217 DHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 217 ~~~~~~~s~d~~i~vwd~~~~ 237 (285)
.+++++-+..+.|.++++...
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSS
T ss_pred CEEEEEecCCCeEEEEccCCC
Confidence 556677777788999888654
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.76 E-value=0.019 Score=51.31 Aligned_cols=164 Identities=11% Similarity=-0.022 Sum_probs=92.4
Q ss_pred CcceEEEEEecCCC-EEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCC-cEEE
Q 023246 61 NIHITGLAYSNTSE-LLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPND-EYVM 137 (285)
Q Consensus 61 ~~~v~~i~~s~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~ 137 (285)
...+..++|.+... ++++. ..+.|+.+++..... .......+..... ....|++ ++.+ ++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------------~~~~~~vi~~~l~--~P~GLAv-D~~~~~LY~ 487 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------------VSSYDTVISRDIQ--APDGLAV-DWIHSNIYW 487 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------------CEEEECSSCS--CCCEEEE-ETTTTEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------------CcceeEEEecCCC--Ccceeee-eecCCcEEE
Confidence 34678899998654 44553 478899888864300 0011222221222 2677887 6655 5556
Q ss_pred EecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe-c-CCcEEEEcCCCCCCCCCCC-Ccccceeecccc
Q 023246 138 SGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-I-EKTVKLWAPMPTDFPPLPD-NAEKIMKANKQG 214 (285)
Q Consensus 138 ~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~-~-d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 214 (285)
+-...+.|.+.++........+.........|+++|.+.+|.... . .+.|...++.+.....+.. .......+....
T Consensus 488 tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~ 567 (791)
T 3m0c_C 488 TDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDL 567 (791)
T ss_dssp EETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEET
T ss_pred EecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEec
Confidence 666788999999985443333333445688999999765554443 2 3678888887654322211 111222222222
Q ss_pred CCCceEEEeCCCCeEEEEEeccccc
Q 023246 215 REDHSRITLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 215 ~~~~~~~~~s~d~~i~vwd~~~~~~ 239 (285)
...+++++-.....|...++.....
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCeEEEEeCCCCcEEEEecCCCce
Confidence 3345566666667888888765444
No 287
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.50 E-value=0.0075 Score=51.86 Aligned_cols=56 Identities=7% Similarity=-0.088 Sum_probs=41.2
Q ss_pred CCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 141 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 141 ~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
.+|.|..||+.+++.+.++... ..+....+...+..++.++.|+.|+.+|.+++++
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 3589999999999998877632 2333333333456777789999999999988874
No 288
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.46 E-value=0.025 Score=44.28 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=89.2
Q ss_pred cceEEEEEecCCCEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec
Q 023246 62 IHITGLAYSNTSELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 140 (285)
Q Consensus 62 ~~v~~i~~s~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 140 (285)
.....++|+++++++++. .++.|..||.... ....+.. . .....+++ +++++++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-----------------~~~~~~~-~--~~p~gia~-~~dG~l~vad~ 90 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-----------------QQIHATV-E--GKVSGLAF-TSNGDLVATGW 90 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-----------------EEEEEEC-S--SEEEEEEE-CTTSCEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-----------------eEEEEeC-C--CCceeEEE-cCCCcEEEEec
Confidence 457789999999977775 5889999987643 2222222 2 23788987 89998766653
Q ss_pred C-C-CeEEEEecCCCceEEEEec-ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC--CC---------CCCCCccc
Q 023246 141 D-C-GHLFIWKKKGGKLVRLMVG-DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD--FP---------PLPDNAEK 206 (285)
Q Consensus 141 ~-d-g~v~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~--~~---------~~~~~~~~ 206 (285)
. + ..|..+|..+++....... .......++..+.+..+++-..++.|..+|...+. +. ........
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred cCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 3 2 3577788777775433221 12233455555555445555467888888876431 10 00000011
Q ss_pred ceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 207 IMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
...+ ......++++-+..+.|..+++..
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 1111 111234667777889999999875
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.43 E-value=0.01 Score=51.17 Aligned_cols=55 Identities=13% Similarity=-0.087 Sum_probs=40.3
Q ss_pred CCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC
Q 023246 142 CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF 197 (285)
Q Consensus 142 dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~ 197 (285)
+|.|..||+.+++.+.+...+. ++..-.....+..++.++.|+.++.||.+++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 6889999999999987776432 222222222466777799999999999988874
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.43 E-value=0.041 Score=47.54 Aligned_cols=204 Identities=12% Similarity=0.004 Sum_probs=112.0
Q ss_pred cEEEEeeC-CCcEEEEEc-cCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec-CCC----EEEEecCCcEEEEEc
Q 023246 17 NYFAVGGS-DEYARVYDI-RKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN-TSE----LLISYNDELVYLFEK 89 (285)
Q Consensus 17 ~~l~tg~~-dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~-~~~----~l~s~~d~~i~iwd~ 89 (285)
..+++++. ++.|.-+|. .+++.+............... .. ......++++| ++. +++...|+.|.-+|.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~---~~-~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa 138 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVA---CC-DLVNRGLAYWPGDGKTPALILKTQLDGNVAALNA 138 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGC---SS-CSCCCCCEEECCCSSSCCEEEEECTTSEEEEEET
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccc---cc-cccccceEEEecCCcceeEEEEEcCCCEEEEEEC
Confidence 35666666 899999999 888865444332211100000 00 00011244543 333 444456999999999
Q ss_pred CCCCCCCCCCCCCccccCCCCceEeecccC--ceeeee-EEEecCCCcEEEEec------CCCeEEEEecCCCceEEEEe
Q 023246 90 NMGLGPSPLSLSPEDLQKREEPQVYSGHRN--SQTVKG-VNFFGPNDEYVMSGS------DCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~-~~~~~~~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~ 160 (285)
.++ +.+-....... ...+.+ ... .++ .++.++ .+|.|+.+|.++|+.+..+.
T Consensus 139 ~TG----------------~~~W~~~~~~~~~~~~~~ssP~v--~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 139 ETG----------------ETVWKVENSDIKVGSTLTIAPYV--VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp TTC----------------CEEEEEECCCGGGTCBCCSCCEE--ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCC----------------CEEEeecCCCCCccceeecCCEE--ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 888 44443332110 001211 111 134 444544 38999999999999998776
Q ss_pred cccccc--------------------------------------eEeEEcCCCCeEEEEecC----------------Cc
Q 023246 161 GDRHVV--------------------------------------NQLEPHPHIPMFATCGIE----------------KT 186 (285)
Q Consensus 161 ~h~~~v--------------------------------------~~~~~~p~~~~l~t~~~d----------------~~ 186 (285)
...... ..+++.+...++..+..+ ..
T Consensus 200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence 322110 134566666676666544 37
Q ss_pred EEEEcCCCCCCC---CCCCC--------cccceeeccccCCC---ceEEEeCCCCeEEEEEecccccceeEe
Q 023246 187 VKLWAPMPTDFP---PLPDN--------AEKIMKANKQGRED---HSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 187 i~iwd~~~~~~~---~~~~~--------~~~~~~~~~~~~~~---~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
|..+|++++++. +...| ..+++... ...++ ..++.++.+|.++++|..+++.+....
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~-~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQ-KDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEE-ECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccEEEec-cccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 888898887641 12112 11222110 00122 367778999999999998887765544
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.39 E-value=0.057 Score=46.88 Aligned_cols=181 Identities=10% Similarity=-0.033 Sum_probs=98.0
Q ss_pred CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEE-EEe-cCCcEEEEEcCCCCCCCCCCCC
Q 023246 24 SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELL-ISY-NDELVYLFEKNMGLGPSPLSLS 101 (285)
Q Consensus 24 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l-~s~-~d~~i~iwd~~~~~~~~~~~~~ 101 (285)
....|+..++..... ...+.......+..++|++.+..| .+- ..+.|..+++...
T Consensus 16 ~~~~I~~i~~~~~~~--------------~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~--------- 72 (619)
T 3s94_A 16 NRRDLRLVDATNGKE--------------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--------- 72 (619)
T ss_dssp CSSBEEEECCC-----------------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------
T ss_pred ccccEEEEeCCCCcc--------------eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC---------
Confidence 357888888875420 001111223357899999866644 443 4788988888654
Q ss_pred CccccCCCCce-EeecccCceeeeeEEEecC-CCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEE
Q 023246 102 PEDLQKREEPQ-VYSGHRNSQTVKGVNFFGP-NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFA 179 (285)
Q Consensus 102 ~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 179 (285)
.... .+...... ...+++ ++ .+++.++-...+.|.+.++........+...-.....|+++|.+.+|.
T Consensus 73 -------~~~~~v~~~~~~~--P~GlAv-D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly 142 (619)
T 3s94_A 73 -------ESVQNVVVSGLLS--PDGLAC-DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMY 142 (619)
T ss_dssp ---------CEEEECSSCSC--EEEEEE-ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEE
T ss_pred -------CceEEEEeCCCCC--cCeEEE-EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEE
Confidence 1112 22222122 778887 77 455556666789999999985443333334445688999999755544
Q ss_pred EEe--cCCcEEEEcCCCCCCCCCC-CCcccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 180 TCG--IEKTVKLWAPMPTDFPPLP-DNAEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 180 t~~--~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
... ..+.|...++.+.....+. ........+.......+++++-...+.|...++...
T Consensus 143 ~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 143 WTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred EeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 443 2456776777655432221 111111222222223445666666677777777653
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.27 E-value=0.03 Score=44.38 Aligned_cols=153 Identities=12% Similarity=0.155 Sum_probs=86.4
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCc
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDEL 83 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~ 83 (285)
..+.++++.|++ .+++.+...+..+-+|- .++.. .... ......+..+.+.+++.+++.+.+|.
T Consensus 163 ~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~-gG~tW------------~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~ 226 (327)
T 2xbg_A 163 GVMRNLNRSPSG-EYVAVSSRGSFYSTWEP-GQTAW------------EPHN--RTTSRRLHNMGFTPDGRLWMIVNGGK 226 (327)
T ss_dssp CCEEEEEECTTS-CEEEEETTSSEEEEECT-TCSSC------------EEEE--CCSSSCEEEEEECTTSCEEEEETTTE
T ss_pred cceEEEEEcCCC-cEEEEECCCcEEEEeCC-CCCce------------eECC--CCCCCccceeEECCCCCEEEEeCCce
Confidence 357788999864 66666544333333332 12210 1110 22345788899999998888888888
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecc--cCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
+++.+...+ +....+... .....+..+.+ .+++..++.+. +|.| ++....++.-..+..
T Consensus 227 ~~~s~~D~G----------------~tW~~~~~~~~~~~~~~~~v~~-~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 227 IAFSDPDNS----------------ENWGELLSPLRRNSVGFLDLAY-RTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVD 287 (327)
T ss_dssp EEEEETTEE----------------EEECCCBCTTSSCCSCEEEEEE-SSSSCEEEEES-TTCE-EEESSTTSSCEECGG
T ss_pred EEEecCCCC----------------CeeEeccCCcccCCcceEEEEe-cCCCEEEEEeC-CCeE-EEeCCCCcccEEcCc
Confidence 877653322 111111111 01112778886 77777666655 5666 344554554444432
Q ss_pred ---ccccceEeEEcCCCCeEEEEecCCcEEEEcC
Q 023246 162 ---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAP 192 (285)
Q Consensus 162 ---h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~ 192 (285)
....+..+.|.+++ .++.++.+|.|.-++-
T Consensus 288 ~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 288 VKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp GTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred cCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 23567888887554 4666777898877664
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.22 E-value=0.01 Score=51.93 Aligned_cols=66 Identities=11% Similarity=-0.011 Sum_probs=43.5
Q ss_pred CCCcEEEEecCCC-----------eEEEEecCCCceEEEE--ecccccc-eEeEEcCCCCeEEEEecC-----------C
Q 023246 131 PNDEYVMSGSDCG-----------HLFIWKKKGGKLVRLM--VGDRHVV-NQLEPHPHIPMFATCGIE-----------K 185 (285)
Q Consensus 131 ~~~~~l~~~~~dg-----------~v~vwd~~~~~~~~~~--~~h~~~v-~~~~~~p~~~~l~t~~~d-----------~ 185 (285)
.+++.++.|+.++ .|.+||..+.+-.... ..+.... .+++..|++++++.|+.+ .
T Consensus 409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~ 488 (656)
T 1k3i_A 409 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVF 488 (656)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCC
T ss_pred CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCccc
Confidence 4778888887543 6888888766654332 1122222 344667899999998854 4
Q ss_pred cEEEEcCCCCC
Q 023246 186 TVKLWAPMPTD 196 (285)
Q Consensus 186 ~i~iwd~~~~~ 196 (285)
.+.+||+.+.+
T Consensus 489 ~v~~ydp~t~~ 499 (656)
T 1k3i_A 489 TPEIYVPEQDT 499 (656)
T ss_dssp CCEEEEGGGTE
T ss_pred ceEEEcCCCCc
Confidence 68999987654
No 294
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.015 Score=48.16 Aligned_cols=151 Identities=9% Similarity=0.069 Sum_probs=87.6
Q ss_pred ceEEEEEecC--CCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec
Q 023246 63 HITGLAYSNT--SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS 140 (285)
Q Consensus 63 ~v~~i~~s~~--~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 140 (285)
....++++|+ +.++++...+.|+.+|+... .+..+..... ....+++ ++++++|+.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~-----------------~v~~~~~~~~--~P~~ia~-d~~G~~lyvad 197 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE-----------------YVSTVYSGLS--KVRTICW-THEADSMIITN 197 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT-----------------EEEEEECCCS--CEEEEEE-CTTSSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC-----------------EEEEEecCCC--CcceEEE-eCCCCEEEEEe
Confidence 4578999973 45555544488999998765 3333333222 2788997 99999555544
Q ss_pred C-C----CeEEEEecCCCceE--EEEecccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCCCCCC--CCcccceee
Q 023246 141 D-C----GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDFPPLP--DNAEKIMKA 210 (285)
Q Consensus 141 ~-d----g~v~vwd~~~~~~~--~~~~~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~ 210 (285)
. . ..+.+++.. +... ..+.. ......++++| ++.++++-..++.|..+++.......+. ........+
T Consensus 198 ~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 198 DQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp CCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred CCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 3 2 234445543 3221 23322 34567889999 6666666667789999998765431110 011112222
Q ss_pred ccccCCCc-eEEEeCCCCeEEEEEecc
Q 023246 211 NKQGREDH-SRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 211 ~~~~~~~~-~~~~~s~d~~i~vwd~~~ 236 (285)
.. .++++ ++++-...+.|..++...
T Consensus 276 a~-~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 276 QF-HPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EE-CTTSSEEEEEETTTTEEEEEEEET
T ss_pred EE-cCCCCEEEEEECCCCEEEEEeCCc
Confidence 22 23334 667777788888888764
No 295
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.19 E-value=0.051 Score=42.27 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=53.5
Q ss_pred CCcEEEEecCC-----CeEEEEecCCCceE--EEEecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCCCC
Q 023246 132 NDEYVMSGSDC-----GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 199 (285)
Q Consensus 132 ~~~~l~~~~~d-----g~v~vwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~ 199 (285)
+++.++.|+.+ ..+.+||..+.+-. ..+.........+.+ +++.++.|+.+ ..+..||+.+.....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777653 36889998766533 222211112222222 56677777654 358889987765322
Q ss_pred CCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 200 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
+.....+.........++.+++.|+.+ ..+.+||+.+.
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 211111110000111234566666553 56888887765
No 296
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.12 E-value=0.061 Score=41.80 Aligned_cols=104 Identities=7% Similarity=0.001 Sum_probs=52.5
Q ss_pred CCcEEEEecCC-----CeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCCCC
Q 023246 132 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 199 (285)
Q Consensus 132 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~ 199 (285)
+++.++.|+.+ ..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+.....
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 56777777654 4588999876653322 1111111222222 56677777754 468899987765322
Q ss_pred CCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 200 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
+...............++.+++.|+.+ ..+.+||..+.
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 211111100000111234455666544 45677776654
No 297
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.11 E-value=0.065 Score=42.89 Aligned_cols=162 Identities=7% Similarity=0.056 Sum_probs=91.8
Q ss_pred eeEEEEcCCCCcEEEEee-------------CCCcEEEEEccCCcccCCcCCCCCccccccccc-CCCCCcceEEEEEec
Q 023246 6 LNAIVIDPRNPNYFAVGG-------------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHL-IGKNNIHITGLAYSN 71 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~-------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~s~ 71 (285)
...+.+.|++ ++++++ .+|.|.++|+.+.... ...+..... .....-....+.+.+
T Consensus 52 ~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--------~~~l~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 52 SEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--------VSELEIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp CCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCC--------EEECEEECSSCCGGGCCEEEEEEEE
T ss_pred cceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--------eEEEEccCCCCCcCceeeeeeEEEE
Confidence 4567788864 444554 6899999998743210 011111110 011233566777766
Q ss_pred --CCC--EEEEe-c--CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec----
Q 023246 72 --TSE--LLISY-N--DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS---- 140 (285)
Q Consensus 72 --~~~--~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---- 140 (285)
++. ++++. . +.+|.+|++.... .....+..+.+.. -...+.+.+ .++|.+.++..
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~------------~~~~~~~~~~g~~-~~~pND~~v-~~~G~fyvt~~~~ft 187 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEE------------KSLLHLKTIRHKL-LPSVNDIVA-VGPEHFYATNDHYFI 187 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTT------------TEEEEEEEECCTT-CSSEEEEEE-EETTEEEEEESCSCS
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCC------------CEEEEEeccccCC-CCCCceEEE-eCCCCEEecCCcEeC
Confidence 454 44442 2 5778888876531 0002233343322 123788887 88898877754
Q ss_pred -------------CCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe-cCCcEEEEcCCC
Q 023246 141 -------------DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG-IEKTVKLWAPMP 194 (285)
Q Consensus 141 -------------~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~-~d~~i~iwd~~~ 194 (285)
..|.|+.+|. ++.. .+...-...+.++|+|+++.|..+. ..+.|..|++..
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1356666665 3322 2322335678999999998866554 567899999863
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.09 E-value=0.018 Score=47.72 Aligned_cols=152 Identities=9% Similarity=0.065 Sum_probs=86.7
Q ss_pred cceEEEEEecC---CCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEE
Q 023246 62 IHITGLAYSNT---SELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMS 138 (285)
Q Consensus 62 ~~v~~i~~s~~---~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 138 (285)
.....++|+|+ +.++++-..+.|+.++...+ .+..+..... ....+++ +++++++++
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-----------------~v~~~~~~~~--~P~giav-d~dG~lyVa 198 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-----------------YVDIKTTNIG--QCADVNF-TLNGDMVVV 198 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT-----------------EEEEECCCCS--CEEEEEE-CTTCCEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC-----------------EEEEeecCCC--CccEEEE-CCCCCEEEE
Confidence 34678999985 55666533488999998765 3333433222 2788997 999995555
Q ss_pred ecCC----CeEEEEecCCCce-EEEEecccccceEeEEcC-CCCeEEEEecCCcEEEEcCCCCCC-CCCCC--Cccccee
Q 023246 139 GSDC----GHLFIWKKKGGKL-VRLMVGDRHVVNQLEPHP-HIPMFATCGIEKTVKLWAPMPTDF-PPLPD--NAEKIMK 209 (285)
Q Consensus 139 ~~~d----g~v~vwd~~~~~~-~~~~~~h~~~v~~~~~~p-~~~~l~t~~~d~~i~iwd~~~~~~-~~~~~--~~~~~~~ 209 (285)
-... ..+...+...+.. ...+. .......++++| ++.++++-..++.|+.+++.++.+ ..+.. .......
T Consensus 199 d~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 199 DDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp ECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred cCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 4321 1244444332221 11222 234567789999 666666666778899999875543 11110 1111111
Q ss_pred eccccCCCc-eEEEeCCCCeEEEEEec
Q 023246 210 ANKQGREDH-SRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 210 ~~~~~~~~~-~~~~~s~d~~i~vwd~~ 235 (285)
+.. .+++. ++++-.....|+.+++.
T Consensus 278 ia~-dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 278 IVW-HPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEE-CTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEE-eCCCCEEEEEeCCCCEEEEEeCC
Confidence 222 33333 66677777888888765
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.08 E-value=0.027 Score=44.40 Aligned_cols=156 Identities=8% Similarity=0.059 Sum_probs=94.5
Q ss_pred eEEEEEecCC-CEEEEe-cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceE-eec----ccCceeeeeEEEe--cCCCc
Q 023246 64 ITGLAYSNTS-ELLISY-NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQV-YSG----HRNSQTVKGVNFF--GPNDE 134 (285)
Q Consensus 64 v~~i~~s~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~i~~~~~~--~~~~~ 134 (285)
..+++|.+.. .++++. ..++|..|+...+ ..... +.. ......+..+.+. +++++
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~----------------~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr 78 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ----------------SHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR 78 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTC----------------CEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCC----------------eEEEEecCCccccCCCcceeeEEEEeccCCCCc
Confidence 3478998855 455555 4999999998644 11111 211 1111235788852 57787
Q ss_pred EEEEec-------------CCCeEEEEecC---CCceEEEEe--ccc-----------ccceEeEEcCCCCeEEEEecC-
Q 023246 135 YVMSGS-------------DCGHLFIWKKK---GGKLVRLMV--GDR-----------HVVNQLEPHPHIPMFATCGIE- 184 (285)
Q Consensus 135 ~l~~~~-------------~dg~v~vwd~~---~~~~~~~~~--~h~-----------~~v~~~~~~p~~~~l~t~~~d- 184 (285)
++++.. .+..|..||+. +++.+.... ... .....++..++|+..++++.-
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM 158 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC
Confidence 777543 26789999999 787765543 111 247899999999999988888
Q ss_pred CcEEEEcCCCCCCCCC----CC-C-cccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 185 KTVKLWAPMPTDFPPL----PD-N-AEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 185 ~~i~iwd~~~~~~~~~----~~-~-~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
+.|...++.+..+..+ .. . .....-+. ..+++..++.....+.|..+|+..
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv-~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWESGNGGQRPGYSGIT-FDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEE-EETTTTEEEEESSSSSEEEEECSS
T ss_pred CeEEEEeCCCCEEeeeeecCCCcccccCcceEE-EeCCCCEEEEEcCCCeEEEEcCCC
Confidence 8887777765532211 00 0 00011111 123344555544499999999874
No 300
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.95 E-value=0.072 Score=41.78 Aligned_cols=104 Identities=7% Similarity=-0.018 Sum_probs=50.9
Q ss_pred CCcEEEEecCC--------CeEEEEecCCCceEE--EEecccccceEeEEcCCCCeEEEEec-C-----CcEEEEcCCCC
Q 023246 132 NDEYVMSGSDC--------GHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATCGI-E-----KTVKLWAPMPT 195 (285)
Q Consensus 132 ~~~~l~~~~~d--------g~v~vwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~t~~~-d-----~~i~iwd~~~~ 195 (285)
+++.++.|+.+ ..+.+||..+.+-.. .+.........+. .+++.++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56677777632 458899988664322 1111111111222 35567777765 2 36888998776
Q ss_pred CCCCCCCCcccceeeccccCCCceEEEeCCCC-----eEEEEEeccc
Q 023246 196 DFPPLPDNAEKIMKANKQGREDHSRITLTPDV-----IMHVLRLQRR 237 (285)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~-----~i~vwd~~~~ 237 (285)
....+.....+.........++.+++.|+.++ .+.+||..+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 43222211111100001112344566655442 5777777654
No 301
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.93 E-value=0.045 Score=42.82 Aligned_cols=104 Identities=9% Similarity=0.039 Sum_probs=52.3
Q ss_pred CCcEEEEecCC-----CeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCCCC
Q 023246 132 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDFPP 199 (285)
Q Consensus 132 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~~~ 199 (285)
+++.++.|+.+ ..+.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56777777643 3588889876543221 1111111222222 56677777654 358889987664322
Q ss_pred CCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 200 LPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
+.....+.........++.+++.|+.+ ..+.+||+.+.
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 211111100000011234466666543 56888887664
No 302
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.92 E-value=0.058 Score=39.81 Aligned_cols=111 Identities=14% Similarity=0.004 Sum_probs=64.4
Q ss_pred ceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC
Q 023246 63 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC 142 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 142 (285)
.++.++|+|+|.+.+. .++.++-.+..+... ..+-...+.-+........++.| ++++.+.++ .|
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~-----------~~W~~s~t~IG~~Gw~~F~a~~f-D~~G~LYav--~d 106 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDN-----------DNWMGRAKKIGNGGWNQFQFLFF-DPNGYLYAV--SK 106 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTT-----------CCHHHHCEEEECSCGGGCSEEEE-CTTSCEEEE--ET
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCc-----------ccccccccEecccccccceEEEE-CCCCCEEEe--CC
Confidence 6679999999998777 878766666543200 00000001111111111366766 999988877 56
Q ss_pred CeEEEEecCCCceE------EEE-ecccccceEeEEcCCCCeEEEEecCCcEEEE
Q 023246 143 GHLFIWKKKGGKLV------RLM-VGDRHVVNQLEPHPHIPMFATCGIEKTVKLW 190 (285)
Q Consensus 143 g~v~vwd~~~~~~~------~~~-~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iw 190 (285)
|.|+-++-.+...- ..+ ..--..+..|.+.|+|.+.+.. |+.+.-+
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 99998886432211 111 1112467999999999876666 7765433
No 303
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.89 E-value=0.1 Score=40.60 Aligned_cols=104 Identities=11% Similarity=0.050 Sum_probs=51.7
Q ss_pred CCcEEEEecCC-------CeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCC
Q 023246 132 NDEYVMSGSDC-------GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDF 197 (285)
Q Consensus 132 ~~~~l~~~~~d-------g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~ 197 (285)
+++.++.|+.+ ..+.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+...
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 56677776642 3588999876643322 2211112222222 56677777754 3688999877653
Q ss_pred CCCCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 198 PPLPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
..+...............++.+++.|+.+ ..+.+||..+.
T Consensus 233 ~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred eeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 22211111100000111234455666544 34777776654
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.89 E-value=0.098 Score=42.70 Aligned_cols=110 Identities=8% Similarity=0.060 Sum_probs=76.0
Q ss_pred EEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeeccc--CceeeeeEEEecCCCcEEEEecCCCe
Q 023246 67 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKGVNFFGPNDEYVMSGSDCGH 144 (285)
Q Consensus 67 i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~dg~ 144 (285)
.....+|..++...++.||.-++... ..-+.+.... .-..+..+.. +|+|++++..+ +..
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~----------------~~Yk~L~~~~~i~f~~i~qlvl-SpsG~lLAl~g-~~~ 87 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTD----------------SLYHSLNFSRHLVLDDTFHVIS-STSGDLLCLFN-DNE 87 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTC----------------SSCEEEECTTTCCCCTTCEEEE-CTTSSEEEEEC-SSE
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCC----------------CcceEEecCcccccCceeEEEE-CCCCCEEEEec-CCe
Confidence 34456777888888899998888744 2334444331 1112777886 99999998876 457
Q ss_pred EEEEecCCCc------------eEEEEec------ccccceEeEEcCCC---CeEEEEecCCcEEEEcCCC
Q 023246 145 LFIWKKKGGK------------LVRLMVG------DRHVVNQLEPHPHI---PMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 145 v~vwd~~~~~------------~~~~~~~------h~~~v~~~~~~p~~---~~l~t~~~d~~i~iwd~~~ 194 (285)
|.|..+..+. ..+.+.- ...+|..+.|||-+ ..|++-..|++|++||+..
T Consensus 88 V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 88 IFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp EEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred EEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 8888877321 1223332 24679999999954 4699999999999999975
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.86 E-value=0.11 Score=40.50 Aligned_cols=185 Identities=9% Similarity=0.014 Sum_probs=87.8
Q ss_pred cEEEEeeC--CCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ecC----CcEEEEEc
Q 023246 17 NYFAVGGS--DEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YND----ELVYLFEK 89 (285)
Q Consensus 17 ~~l~tg~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~d----~~i~iwd~ 89 (285)
.+++.|+. ...+.+||..+++....-. . .........+. -++.+++. |.+ ..+.+||.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~------------~-p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~ 77 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRC------------P-FEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNV 77 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCC------------C-SCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEET
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCC------------C-CcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeC
Confidence 56777765 3678899988776432110 0 00011111222 25555555 433 56888888
Q ss_pred CCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC------CeEEEEecCCCceEEE--Eec
Q 023246 90 NMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC------GHLFIWKKKGGKLVRL--MVG 161 (285)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~--~~~ 161 (285)
.+. ....+..-..+..-.+++. .+++.++.|+.+ ..+.+||..+.+-... +..
T Consensus 78 ~~~-----------------~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 78 VKD-----------------SWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp TTT-----------------EEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred CCC-----------------eEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 765 2222221111111112222 256777777754 4588999887653322 111
Q ss_pred ccccceEeEEcCCCCeEEEEec---------CCcEEEEcCCCCCCCCCCCCcccceeeccccCCCceEEEeCCC-----C
Q 023246 162 DRHVVNQLEPHPHIPMFATCGI---------EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGREDHSRITLTPD-----V 227 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~ 227 (285)
.......+.+ +++.++.|+. -..+.+||+.+.....+...............++.+++.|+.+ .
T Consensus 139 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 216 (306)
T 3ii7_A 139 QRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLD 216 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBC
T ss_pred CcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCc
Confidence 1111122222 5666666653 2458889987765322211111110000011134455665543 4
Q ss_pred eEEEEEeccc
Q 023246 228 IMHVLRLQRR 237 (285)
Q Consensus 228 ~i~vwd~~~~ 237 (285)
.+.+||..+.
T Consensus 217 ~~~~yd~~~~ 226 (306)
T 3ii7_A 217 NVEYYDIKLN 226 (306)
T ss_dssp CEEEEETTTT
T ss_pred eEEEeeCCCC
Confidence 5788887664
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.84 E-value=0.019 Score=45.69 Aligned_cols=101 Identities=9% Similarity=0.153 Sum_probs=61.3
Q ss_pred CCcEEEEecCCCeEEEEecCCCceEEEEecccccceEeEEcCCC----C---e-EEEEec--CCcEEEEcC--CCCCCCC
Q 023246 132 NDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHI----P---M-FATCGI--EKTVKLWAP--MPTDFPP 199 (285)
Q Consensus 132 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~----~---~-l~t~~~--d~~i~iwd~--~~~~~~~ 199 (285)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|.- + + +++.-. +.+|.+|++ ..+.+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666677889999999 6999988864 567777776632 2 2 233334 578999955 4444333
Q ss_pred CCC-------Ccccceeecc--ccCCC-ceEEEeCCCCeEEEEEec
Q 023246 200 LPD-------NAEKIMKANK--QGRED-HSRITLTPDVIMHVLRLQ 235 (285)
Q Consensus 200 ~~~-------~~~~~~~~~~--~~~~~-~~~~~~s~d~~i~vwd~~ 235 (285)
+.. ....++-+.. ..... .+++....+|.+..|++.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 311 1022222211 12223 267777888999999994
No 307
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.13 Score=43.08 Aligned_cols=172 Identities=12% Similarity=0.047 Sum_probs=95.0
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEcc-------CCcccCCcCCC--CCcccccccccCCCCCcceEEEEEecCCCE-
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIR-------KCHWYSPISSD--TPVDTFCPRHLIGKNNIHITGLAYSNTSEL- 75 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~- 75 (285)
...++++|+++.++++-..++.|..+|+. ++......... ..... ... .........|+|+|+|+.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~--l~~--~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQ--LFT--IADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEE--EEE--CSSSSCCEEEEECTTSSEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccce--eEe--cCCCCCceEEEEcCCCCEE
Confidence 35788999766778888888999999997 55421000000 00000 001 122345679999999994
Q ss_pred EEE-ecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc------cC------c-eeee-eEEEec-------CCC
Q 023246 76 LIS-YNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH------RN------S-QTVK-GVNFFG-------PND 133 (285)
Q Consensus 76 l~s-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~-~~i~-~~~~~~-------~~~ 133 (285)
+++ .....|+.++....... + .....+.+. .+ . .... .+.. . .++
T Consensus 325 YvaD~~~h~I~kid~dg~~~~----~--------~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~v-d~~~~~~~~~g 391 (496)
T 3kya_A 325 YFGVINNHYFMRSDYDEIKKE----F--------ITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFV-KNPDYTGEEEY 391 (496)
T ss_dssp EEEETTTTEEEEEEEETTTTE----E--------CCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEE-ECTTCCSSCCE
T ss_pred EEEeCCCCEEEEEecCCCcce----e--------cccEEecCCCCCCcccCCcccccccCCCeEEEEE-ccccccccCCC
Confidence 444 34788988766432000 0 000111111 00 0 0123 3332 3 456
Q ss_pred cEEEEecCCCeEEEEecCCCceEEEEeccc------------------------ccceEeEEcCC-CCeEEEEecCCcEE
Q 023246 134 EYVMSGSDCGHLFIWKKKGGKLVRLMVGDR------------------------HVVNQLEPHPH-IPMFATCGIEKTVK 188 (285)
Q Consensus 134 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~------------------------~~v~~~~~~p~-~~~l~t~~~d~~i~ 188 (285)
.++++=...+.|+.++. ++. +.++.+.. .....|+++++ +.++++=.....|+
T Consensus 392 ~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIr 469 (496)
T 3kya_A 392 DFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIR 469 (496)
T ss_dssp EEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 77777777889999984 464 44443320 13567888886 65555555667888
Q ss_pred EEcCCCCC
Q 023246 189 LWAPMPTD 196 (285)
Q Consensus 189 iwd~~~~~ 196 (285)
.+++....
T Consensus 470 ki~~~~~~ 477 (496)
T 3kya_A 470 TISMEQEE 477 (496)
T ss_dssp EEEECCCC
T ss_pred EEECCCCc
Confidence 88876543
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.77 E-value=0.13 Score=40.07 Aligned_cols=104 Identities=10% Similarity=0.028 Sum_probs=52.5
Q ss_pred CCcEEEEecC---------CCeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCC
Q 023246 132 NDEYVMSGSD---------CGHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPT 195 (285)
Q Consensus 132 ~~~~l~~~~~---------dg~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~ 195 (285)
+++.++.|+. -..+.+||..+.+-... +......-..+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 5667777664 34588999887643322 1111111122222 56677777653 35888998776
Q ss_pred CCCCCCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 196 DFPPLPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
....+...............++.+++.|+.+ ..+.+||..+.
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred cEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 5322211111110011111244566666643 56788887664
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.73 E-value=0.14 Score=39.79 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=51.0
Q ss_pred CCcEEEEecCCC-----eEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-------CcEEEEcCCCCCC
Q 023246 132 NDEYVMSGSDCG-----HLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-------KTVKLWAPMPTDF 197 (285)
Q Consensus 132 ~~~~l~~~~~dg-----~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-------~~i~iwd~~~~~~ 197 (285)
+++.++.|+.++ .+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+...
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566777776543 577888876653322 1111111122222 56666666643 3588899876643
Q ss_pred CCCCCCcccceeeccccCCCceEEEeCCC-----CeEEEEEeccc
Q 023246 198 PPLPDNAEKIMKANKQGREDHSRITLTPD-----VIMHVLRLQRR 237 (285)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-----~~i~vwd~~~~ 237 (285)
..+...............++.+++.|+.+ ..+.+||..+.
T Consensus 186 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22111111100000111234566666543 46888887654
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.68 E-value=0.07 Score=39.40 Aligned_cols=153 Identities=9% Similarity=-0.001 Sum_probs=78.8
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCC-CCCcceEEEEEecCCCEEEEecCCc
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIG-KNNIHITGLAYSNTSELLISYNDEL 83 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~s~~~~~l~s~~d~~ 83 (285)
.+..++|+|++ .+.++ .+|.+.-.+..+.....-.. ....+-. +-. ...++.|.|+|.+.++ +||.
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~--------s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~ 108 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMG--------RAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDK 108 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHH--------HCEEEECSCGG-GCSEEEECTTSCEEEE-ETTE
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccc--------cccEecccccc-cceEEEECCCCCEEEe-CCCE
Confidence 56789999964 66665 67765555544322100000 0000000 111 1368999999998888 7798
Q ss_pred EEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCce------EE
Q 023246 84 VYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKL------VR 157 (285)
Q Consensus 84 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~------~~ 157 (285)
|+-++..+.. -..+......-+...-..+..+.+ .|+|.+.+.. |+.++-....++.. ..
T Consensus 109 iyr~~pP~~~-----------~~~Wl~~a~~vg~~gw~~~~~lff-~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~ 174 (236)
T 1tl2_A 109 LYKASPPQSD-----------TDNWIARATEVGSGGWSGFKFLFF-HPNGYLYAVH--GQQFYKALPPVSNQDNWLARAT 174 (236)
T ss_dssp EEEESCCCST-----------TCCHHHHSEEEECSSGGGEEEEEE-CTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCE
T ss_pred EEEeCCCcCC-----------CCceeccccEeccCCCCceEEEEE-CCCceEEEEe--CCcEEecCCCCCCCcccccccc
Confidence 8877653320 000000011111111123777876 9999888776 77765444332211 11
Q ss_pred EEe-cccccceEeEEcCCCCeEEEEecCCc
Q 023246 158 LMV-GDRHVVNQLEPHPHIPMFATCGIEKT 186 (285)
Q Consensus 158 ~~~-~h~~~v~~~~~~p~~~~l~t~~~d~~ 186 (285)
.+- ..-..-.-+.|.|++...+.. ++.
T Consensus 175 ~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 175 KIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred eeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 111 222233446688888776555 663
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.62 E-value=0.18 Score=39.82 Aligned_cols=150 Identities=9% Similarity=-0.029 Sum_probs=80.8
Q ss_pred CCcceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCCCcEEEE
Q 023246 60 NNIHITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPNDEYVMS 138 (285)
Q Consensus 60 h~~~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~ 138 (285)
+...+..+.+.+++.+++.+.++.+..-+-..+ .....+. ... ..+..+.+ .++++.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG----------------~tW~~~~~~~~--~~~~~~~~-~~~g~~~~~ 221 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQ----------------TAWEPHNRTTS--RRLHNMGF-TPDGRLWMI 221 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEETTSSEEEEECTTC----------------SSCEEEECCSS--SCEEEEEE-CTTSCEEEE
T ss_pred CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCC----------------CceeECCCCCC--CccceeEE-CCCCCEEEE
Confidence 345688999999999888887776554332112 1222222 122 23778886 788876654
Q ss_pred ecCCCeEEEEecCCCceEEEEec----ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCC-CCCC---CCcccceee
Q 023246 139 GSDCGHLFIWKKKGGKLVRLMVG----DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDF-PPLP---DNAEKIMKA 210 (285)
Q Consensus 139 ~~~dg~v~vwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~-~~~~---~~~~~~~~~ 210 (285)
+.+|.+++.+...++.-..+.. +...+..+++.|++..++.+ .++.| ++....++- ..+. .....+..+
T Consensus 222 -~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v 298 (327)
T 2xbg_A 222 -VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKI 298 (327)
T ss_dssp -ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEE
T ss_pred -eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEE
Confidence 4578877764332332222221 22357889998877666554 46766 444444432 1111 111223333
Q ss_pred ccccCCCceEEEeCCCCeEEEEE
Q 023246 211 NKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 211 ~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
... ....+++++.+|.|.-++
T Consensus 299 ~~~--~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 299 LFF--SPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEE--ETTEEEEECSTTEEEEEC
T ss_pred EEE--CCCceEEEcCCceEEEEc
Confidence 221 233466677788766554
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.35 E-value=0.29 Score=39.03 Aligned_cols=156 Identities=13% Similarity=0.082 Sum_probs=82.7
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC----CCEEEE-e-
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLIS-Y- 79 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~----~~~l~s-~- 79 (285)
-+.|+|.|++ .++++--..|.|++++...++... +. ....+..........|+++|+ +.+.++ +
T Consensus 34 P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~-------v~--~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 34 PWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTE-------LG--EVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEE-------EE--ECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred ceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEee-------ec--ccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 4689999986 677666558999998865554210 00 011111233557889999995 444444 2
Q ss_pred -cCCcEEEEEcCCCCCCCCCCCCCccccCCCC-ceEeecccCceeeeeEEEecCCCcEEEEecC-------------CCe
Q 023246 80 -NDELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD-------------CGH 144 (285)
Q Consensus 80 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~ 144 (285)
.++.|.-|........ ...+...+. +..+.. ........+.| .|++.+.++.++ .|.
T Consensus 104 ~~~~~v~R~~~~~~~~~------~~~~~~~~~i~~~~p~-~~~H~g~~l~f-gpDG~Lyvt~Gd~~~~~~~qd~~~~~G~ 175 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPS------GEQLGAPDTVFRGIPK-GVIHNGGRIAF-GPDKMLYAGTGESGDTGLSQDRKSLGGK 175 (347)
T ss_dssp SSSEEEEEEEBCTTSCT------TCCBCCCEEEEEEECC-CSSCCCCCEEE-CTTSCEEEECBCTTCGGGTTCTTCSTTC
T ss_pred CCCCEEEEEEeCCCCcc------cccCCCcEEEEEcCCC-CCCccCccccC-CCCCCEEEEECCCCCCccccCCCCCCCE
Confidence 3556666665542100 000000011 111211 11112567887 999988777542 355
Q ss_pred EEEEecCCC--------c-eEEEEecccccceEeEEcCCCCeEEEE
Q 023246 145 LFIWKKKGG--------K-LVRLMVGDRHVVNQLEPHPHIPMFATC 181 (285)
Q Consensus 145 v~vwd~~~~--------~-~~~~~~~h~~~v~~~~~~p~~~~l~t~ 181 (285)
|.-++.... . .+. ..+|. ....++|+|++.++++=
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~-a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVY-SYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEE-EBCCS-BCCEEEECTTCCEEEEE
T ss_pred EEEEeCCCCccCCCCCCCCeEE-eeCCC-CcceEEECCCCCEEEEe
Confidence 665665422 1 122 13454 35689999988765543
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.29 E-value=0.28 Score=38.24 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=36.5
Q ss_pred CCcEEEEecCC-----CeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCC
Q 023246 132 NDEYVMSGSDC-----GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTD 196 (285)
Q Consensus 132 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~ 196 (285)
+++.++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 56777777654 4588899876543221 1111112222222 56677777654 468899987765
No 314
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.26 E-value=0.18 Score=39.49 Aligned_cols=63 Identities=11% Similarity=0.131 Sum_probs=34.3
Q ss_pred CCcEEEEecCC-------CeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC------CcEEEEcCCCCC
Q 023246 132 NDEYVMSGSDC-------GHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE------KTVKLWAPMPTD 196 (285)
Q Consensus 132 ~~~~l~~~~~d-------g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d------~~i~iwd~~~~~ 196 (285)
+++.++.|+.+ ..+.+||..+.+-... +......-. ++. .+++.++.|+.+ ..+.+||+.+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN-VIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE-EEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccE-EEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56666776653 3578888876543321 111111111 222 356666666642 358899987764
No 315
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.06 Score=42.76 Aligned_cols=146 Identities=15% Similarity=0.151 Sum_probs=77.7
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCC--CCcccccccccCCCCCcceEEEEEecCCCEEEE--ecCCcEEEEEcCCC
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSD--TPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS--YNDELVYLFEKNMG 92 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s--~~d~~i~iwd~~~~ 92 (285)
.+++.++.||.|.-.|..+|+.....+.. .++.. . ..... ..++..++. ..||.|..++..++
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~-----~-~~~~~-------~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIE-----I-QEPSR-------LETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEE-----C-CCSCT-------TTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEE-----e-cCCcc-------ccCCcEEEEEECCCCEEEEEECCCC
Confidence 58889999999999999999865443322 11100 0 00000 012334433 35888888887655
Q ss_pred CCCCCCCCCCccccCCCCceEeeccc--Cceeeee---EEEec----CCCcEEEEecCCCeEEEEecCCCceEEEEeccc
Q 023246 93 LGPSPLSLSPEDLQKREEPQVYSGHR--NSQTVKG---VNFFG----PNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDR 163 (285)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~---~~~~~----~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~ 163 (285)
.....+.... ...++.. ..... ..+..+++|+.+|.++..|+.+|+.+..+....
T Consensus 78 ----------------~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 78 ----------------LQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp ----------------EEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred ----------------cEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 1111111110 0000110 00000 156788999999999999999999999886321
Q ss_pred --cc-----ceEeEEc-----CCCCeEEEEecCCcEEEEc
Q 023246 164 --HV-----VNQLEPH-----PHIPMFATCGIEKTVKLWA 191 (285)
Q Consensus 164 --~~-----v~~~~~~-----p~~~~l~t~~~d~~i~iwd 191 (285)
+. ..+.... -.+..++.+..+..+.+.+
T Consensus 142 ~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 142 KNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp BCC--------------------CCEEEEEEEEEECEECC
T ss_pred CcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence 10 0011110 1234566777777777766
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.88 E-value=0.47 Score=39.45 Aligned_cols=63 Identities=13% Similarity=0.141 Sum_probs=35.4
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccC--CCCCcceEEEEEecC----CCEEEE
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI--GKNNIHITGLAYSNT----SELLIS 78 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~i~~s~~----~~~l~s 78 (285)
-++|+|.|++ +++++-...+.|++++..+++... +.. ..... .........|+|+|+ +.+.++
T Consensus 29 P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~-------~~~--~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 29 PHALLWGPDN-QIWLTERATGKILRVNPESGSVKT-------VFQ--VPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEE-------EEE--CTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred ceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeE-------Eec--CCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 4589999986 666665444568888765443210 000 01111 113456789999994 444444
No 317
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.69 E-value=0.55 Score=36.64 Aligned_cols=63 Identities=10% Similarity=0.148 Sum_probs=35.8
Q ss_pred CCcEEEEecC------CCeEEEEecCCCceEE--EEecccccceEeEEcCCCCeEEEEecCC-----cEEEEcCCCCC
Q 023246 132 NDEYVMSGSD------CGHLFIWKKKGGKLVR--LMVGDRHVVNQLEPHPHIPMFATCGIEK-----TVKLWAPMPTD 196 (285)
Q Consensus 132 ~~~~l~~~~~------dg~v~vwd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~t~~~d~-----~i~iwd~~~~~ 196 (285)
+++.++.|+. -..+.+||..+.+-.. .+........++.+ +++.++.|+.++ .+.+||+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5667777765 2468899987664322 11111111122222 566777777554 57888987765
No 318
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.64 E-value=0.61 Score=36.77 Aligned_cols=170 Identities=8% Similarity=0.061 Sum_probs=99.1
Q ss_pred ccceeEEEEcCCCCcEEEEee------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCC---
Q 023246 3 SIRLNAIVIDPRNPNYFAVGG------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTS--- 73 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~--- 73 (285)
+..|..-..+++..-++++|- -.|.+.+|..+.+. ...+.+|......+....+.
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----------------sQ~ieGhaa~F~~~~~~g~~~~~ 214 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----------------SQPIEGHAASFAQFKMEGNAEES 214 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----------------EEEECCSEEEEEEECCTTCSSCE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----------------cceeeeeeeeeEEEecCCCCCCc
Confidence 445666677787644444443 24778888887543 22236666554443332221
Q ss_pred CEEEEec----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe-ecccCceeeeeEEEecCCCcEEEEecCCCeEEEE
Q 023246 74 ELLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 74 ~~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vw 148 (285)
.+|+-+. .++++|.++....... ..+.. +.+..+ .........-++.. ++.-..++.-+.-|.+++|
T Consensus 215 ~lf~fa~r~~~g~kLhIiEi~~~~~~~-~~f~k------k~vdi~fppea~~DFPVamqv-s~kygviyviTK~G~ihly 286 (365)
T 2xzh_A 215 TLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPK------KAVDVFFPPEAQNDFPVAMQI-SEKHDVVFLITKYGYIHLY 286 (365)
T ss_dssp EEEEEEEEETTEEEEEEEECSSCCTTC-CCCCC------EEEEECCCTTCTTCCEEEEEE-ETTTTEEEEEETTSEEEEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCCCCC-CCccc------ccceeeCCccccCCceEEEEe-cccCCEEEEEeCCcEEEEE
Confidence 1333332 3689999985541000 00000 111111 11111122455665 7777788888899999999
Q ss_pred ecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
|++++.++..-+--...|..-+-+....-++.....|.|.--.++...
T Consensus 287 DleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 287 DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 999999998777656677666655555567777788888777776654
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.61 E-value=0.75 Score=37.64 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=77.4
Q ss_pred ceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccc-cCCCCceEeeccc----CceeeeeEEEecCC---Cc
Q 023246 63 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDL-QKREEPQVYSGHR----NSQTVKGVNFFGPN---DE 134 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~i~~~~~~~~~---~~ 134 (285)
.|..+..+|+|.+||...+..|.|..+..+...... ... ... ..+.+.-.. ....|..+.| +|- +.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~----~~~~~~~-q~~ty~l~~~~~~~~s~I~qVlW-HPl~~~ds 140 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVED----VSIQDAF-QIFHYSIDEEEVGPKSSIKKVLF-HPKSYRDS 140 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCC----HHHHHTT-EEEEEEGGGCC--CCCCEEEEEE-CTTBGGGC
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcc----ccccccc-ceeEEEcCCcccCCCCceeEEEe-ccccCCCC
Confidence 467799999999999999999999999743110000 000 000 112332211 1234889986 764 45
Q ss_pred EEEEecCCCeEEEEecCCC--ceEEEEe---------cccccceEeEEcCCCCeEEEEe--cCCcEEEEc
Q 023246 135 YVMSGSDCGHLFIWKKKGG--KLVRLMV---------GDRHVVNQLEPHPHIPMFATCG--IEKTVKLWA 191 (285)
Q Consensus 135 ~l~~~~~dg~v~vwd~~~~--~~~~~~~---------~h~~~v~~~~~~p~~~~l~t~~--~d~~i~iwd 191 (285)
.|++-..|+.|++||+... ++. .+. .....|.+++|.+++-.|...+ ..|.|+-..
T Consensus 141 ~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 141 CIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred eEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 8999999999999998752 222 332 1225688899998765566644 778776554
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.58 E-value=0.69 Score=37.00 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=78.3
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC----CCEEEEec-
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISYN- 80 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~----~~~l~s~~- 80 (285)
-.+++|.|++ + |+.+..+|.|++++. .++ . .+..+. +..........|+++|+ +.++++..
T Consensus 31 P~~ia~~pdG-~-l~V~e~~g~I~~~d~-~G~-~-------~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 31 PWSIAPLGGG-R-YLVTERPGRLVLISP-SGK-K-------LVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEEEETT-E-EEEEETTTEEEEECS-SCE-E-------EEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CeEEEEcCCC-e-EEEEeCCCEEEEEeC-CCc-e-------Eeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 4679999975 5 444566699998873 332 1 011000 11122346789999997 45555532
Q ss_pred ---C----CcEEEEEcCCCCCCCCCCCCCccccCCCC-ceEeecccCceeeeeEEEecCCCcEEEEecC-----------
Q 023246 81 ---D----ELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSGSD----------- 141 (285)
Q Consensus 81 ---d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----------- 141 (285)
+ ..|..|+...... .+...+. +..+.... ......+.| .|+|.+.++.+.
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~---------~~~~~~~l~~~~~~~~-~h~~~~l~~-~pDG~Lyvt~G~~~~~~~~~d~~ 165 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTF---------KLKEVKTLIDGIPGAY-IHNGGRIRF-GPDGMLYITTGDAADPRLAQDLS 165 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSC---------CEEEEEEEEEEEECCS-SCCCCCEEE-CTTSCEEEECCCTTCGGGGTCTT
T ss_pred cCCCCCcceEEEEEEECCCCc---------CcCccEEEEEcCCCCC-CcCCceEEE-CCCCcEEEEECCCCCCccccCCC
Confidence 3 5677777653200 0000011 11122111 112567887 999987777442
Q ss_pred --CCeEEEEecCCC--------c-eEEEEecccccceEeEEcC-CCCeEEEE
Q 023246 142 --CGHLFIWKKKGG--------K-LVRLMVGDRHVVNQLEPHP-HIPMFATC 181 (285)
Q Consensus 142 --dg~v~vwd~~~~--------~-~~~~~~~h~~~v~~~~~~p-~~~~l~t~ 181 (285)
.|.|.-++.... . .+. ..++. ....++|+| ++.++++-
T Consensus 166 ~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 166 SLAGKILRVDEEGRPPADNPFPNSPIW-SYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCSSEEEEECTTSCCCTTSSSTTCCEE-EECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccC-CcceEEEeCCCCCEEEEe
Confidence 256776666422 1 122 23343 356899999 66655543
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.51 E-value=0.68 Score=36.50 Aligned_cols=204 Identities=9% Similarity=0.138 Sum_probs=115.9
Q ss_pred EEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEE
Q 023246 9 IVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFE 88 (285)
Q Consensus 9 ~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd 88 (285)
.-.+|. ...+|.-. ..+++|+|+++.+.++... ....|.-=.|-.+ +.|+--.+..|+-|+
T Consensus 72 AIMnP~-~~ViALra-g~~LQiFnletK~klks~~----------------~~e~VvfWkWis~-~~L~lVT~taVyHWs 132 (365)
T 2xzh_A 72 AIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHT----------------MTDDVTFWKWISL-NTVALVTDNAVYHWS 132 (365)
T ss_dssp EEECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEE----------------CSSCEEEEEECSS-SEEEEEESSEEEEEE
T ss_pred eeeCCC-ccEEEEec-CCeEEEechHHhhhhccee----------------cCCccEEEEecCC-CeEEEEcCCcEEEEc
Confidence 446885 36777665 6889999999887432211 1235555566543 455555678899999
Q ss_pred cCCCCCCCCCCCCCccccCCCCceEeecccCc--eeeeeEEEecCCCcEEEEec-------CCCeEEEEecCCCceEEEE
Q 023246 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS--QTVKGVNFFGPNDEYVMSGS-------DCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~l~~~~-------~dg~v~vwd~~~~~~~~~~ 159 (285)
+.... .+.+.|..|..- ..|..... +++.++++..+ -.|.+.+|..+ .+.-..+
T Consensus 133 ~~~~s---------------~P~kvFdR~~~L~~~QIInY~~-d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~i 195 (365)
T 2xzh_A 133 MEGES---------------QPVKMFDRHSSLAGCQIINYRT-DAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPI 195 (365)
T ss_dssp SSTTC---------------CCEEEEECCGGGTTCEEEEEEE-CTTSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEE
T ss_pred ccCCC---------------CCceeeecchhcccceEEEEEE-CCCCCEEEEEeEeccCCccceeEEEEeec-cccccee
Confidence 97532 455566554431 22555554 77888765433 24778899887 4566667
Q ss_pred ecccccceEeEEcC--C-CCeEEEEecC---CcEEEEcCCCC--CCCCCCCCccc-----------ceeeccccCCCceE
Q 023246 160 VGDRHVVNQLEPHP--H-IPMFATCGIE---KTVKLWAPMPT--DFPPLPDNAEK-----------IMKANKQGREDHSR 220 (285)
Q Consensus 160 ~~h~~~v~~~~~~p--~-~~~l~t~~~d---~~i~iwd~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 220 (285)
.+|...-..+...- . ...|+.+... +.+++-++... ....+...... .+... .+..-+.+
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamq-vs~kygvi 274 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ-ISEKHDVV 274 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEE-EETTTTEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEE-ecccCCEE
Confidence 77765443333221 1 1134433322 58888887432 11111110000 00110 01123366
Q ss_pred EEeCCCCeEEEEEecccccceeEeeeccc
Q 023246 221 ITLTPDVIMHVLRLQRRQTLAYRERRYNA 249 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (285)
...+.-|.++++|+.++..+..-..+.+.
T Consensus 275 yviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 77788899999999999877665554443
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.42 E-value=0.91 Score=37.34 Aligned_cols=204 Identities=9% Similarity=0.144 Sum_probs=116.6
Q ss_pred EEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcEEEEE
Q 023246 9 IVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELVYLFE 88 (285)
Q Consensus 9 ~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i~iwd 88 (285)
.-.+|.. ..+|.-. ..+++|+|+.+.+.++.... ...|.-=.|-.+ +.|+--.+..|+-|+
T Consensus 71 AIMnP~~-~iiALra-g~~lQiFnle~K~klks~~~----------------~e~VvfWkWis~-~~l~lVT~taVyHWs 131 (494)
T 1bpo_A 71 AIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTM----------------TDDVTFWKWISL-NTVALVTDNAVYHWS 131 (494)
T ss_dssp EEECSSS-SCEEEEE-TTEEEEEETTTTEEEEEEEC----------------SSCCCEEEEEET-TEEEEECSSEEEEEE
T ss_pred eeeCCCC-cEEEEec-CCeEEEEchHHhhhhcceec----------------CCCceEEEecCC-CeEEEEcCCeeEEec
Confidence 4568854 6777665 68999999998764322111 224444455443 355556678899999
Q ss_pred cCCCCCCCCCCCCCccccCCCCceEeecccCc--eeeeeEEEecCCCcEEEEec-------CCCeEEEEecCCCceEEEE
Q 023246 89 KNMGLGPSPLSLSPEDLQKREEPQVYSGHRNS--QTVKGVNFFGPNDEYVMSGS-------DCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~l~~~~-------~dg~v~vwd~~~~~~~~~~ 159 (285)
+.... .+.+.|..|..- ..|..... +++.++++..+ -.|.+.+|..+ .+.-..+
T Consensus 132 i~~~s---------------~P~kvFdR~~~L~~~QIInY~~-d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~i 194 (494)
T 1bpo_A 132 MEGES---------------QPVKMFDRHSSLAGCQIINYRT-DAKQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPI 194 (494)
T ss_dssp SSSSC---------------CCEEEEECCGGGTTCEEEEEEE-CTTSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEE
T ss_pred ccCCC---------------CchhheecchhcccceEEEEEE-CCCCCeEEEEeecccCCcccceEEEeecc-ccccchh
Confidence 96532 355666554431 22555554 78888776433 25778899987 4455667
Q ss_pred ecccccceEeEEcCCC---CeEEEEecC---CcEEEEcCCCC--CCCCCCCCccc-----------ceeeccccCCCceE
Q 023246 160 VGDRHVVNQLEPHPHI---PMFATCGIE---KTVKLWAPMPT--DFPPLPDNAEK-----------IMKANKQGREDHSR 220 (285)
Q Consensus 160 ~~h~~~v~~~~~~p~~---~~l~t~~~d---~~i~iwd~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 220 (285)
.+|...-..+...-+. ..++.+... +.+++.++... ....+...... .+.. ..+..-+.+
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam-qvs~kygvi 273 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM-QISEKHDVV 273 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE-EEETTTTEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE-EecccCCEE
Confidence 7776555444332111 134444432 68899888433 11111100000 0011 011223466
Q ss_pred EEeCCCCeEEEEEecccccceeEeeeccc
Q 023246 221 ITLTPDVIMHVLRLQRRQTLAYRERRYNA 249 (285)
Q Consensus 221 ~~~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (285)
...+.-|.++++|+.++..+..-..+.+.
T Consensus 274 yviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEecCceEEEEecccceeeeeecccCCc
Confidence 67788899999999999777665544433
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.17 E-value=0.93 Score=36.00 Aligned_cols=49 Identities=6% Similarity=-0.159 Sum_probs=24.9
Q ss_pred CeEEEEecCCCceE--EEEecccccceEeEEcCCCCeEEEEec------CCcEEEEcC
Q 023246 143 GHLFIWKKKGGKLV--RLMVGDRHVVNQLEPHPHIPMFATCGI------EKTVKLWAP 192 (285)
Q Consensus 143 g~v~vwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~t~~~------d~~i~iwd~ 192 (285)
..+.+||..+.+-. ..+......-.+++.. ++++++.|+. ...+..|++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 57889998876533 2222111111223322 4566666653 235667776
No 324
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.82 E-value=1.2 Score=35.46 Aligned_cols=193 Identities=9% Similarity=0.100 Sum_probs=107.3
Q ss_pred cEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEec----CCC---EEEEe--c--CCcEE
Q 023246 17 NYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSN----TSE---LLISY--N--DELVY 85 (285)
Q Consensus 17 ~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~----~~~---~l~s~--~--d~~i~ 85 (285)
.+++.....+-+.+||+ .++.+ ..+ . .+.++.+..-| .|+ +++++ . +++|.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l--------------~~~-~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~ 102 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKML--------------HSY-N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEE--------------EEE-C--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE
T ss_pred cEEEEEcCCCCEEEEcC-CCcEE--------------EEc-c--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEE
Confidence 45666667789999999 56632 222 1 13455555555 232 23333 3 57899
Q ss_pred EEEcCCCCCCCCCCCCCccccCCCCceEeecc-----cCceeeeeEEEe-cC-CCc-EEEEecCCCeEEEEecC------
Q 023246 86 LFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-----RNSQTVKGVNFF-GP-NDE-YVMSGSDCGHLFIWKKK------ 151 (285)
Q Consensus 86 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~-~~-~~~-~l~~~~~dg~v~vwd~~------ 151 (285)
+|++.... ..+..+... .....+..++++ ++ .++ +++....+|.+..|++.
T Consensus 103 vf~iDp~~---------------~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 103 IYAIDGKN---------------GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY 167 (355)
T ss_dssp EEEECTTT---------------CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC
T ss_pred EEEECCCC---------------CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc
Confidence 99874221 122222110 110226667653 44 343 67888889999999873
Q ss_pred -CCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCC-----CC-CCCC-CCcc-cc--eeeccccCCCceE
Q 023246 152 -GGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPT-----DF-PPLP-DNAE-KI--MKANKQGREDHSR 220 (285)
Q Consensus 152 -~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~-----~~-~~~~-~~~~-~~--~~~~~~~~~~~~~ 220 (285)
+.+.++++.. .+.+..+...+....|..+-++.-|..++.+.. .+ ..+. ++.. .+ +.+.......+++
T Consensus 168 ~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 168 ISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred ccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 2355677764 357888999998889999998866666664321 11 1111 1111 11 2222112223355
Q ss_pred EEeC-CCCeEEEEEec-ccccceeE
Q 023246 221 ITLT-PDVIMHVLRLQ-RRQTLAYR 243 (285)
Q Consensus 221 ~~~s-~d~~i~vwd~~-~~~~~~~~ 243 (285)
++.+ .+..+.+||.+ ..+.+..+
T Consensus 247 ivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEcCCCCEEEEEECCCCCcEEEEE
Confidence 5544 57899999986 44444433
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.75 E-value=1.3 Score=35.40 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=78.7
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC----CCEEEEec-
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISYN- 80 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~----~~~l~s~~- 80 (285)
-..++|.|++ ++++ +..+|.|++++ .++.. .+.. .. ...........|+|+|+ +.++++..
T Consensus 33 P~~ia~~pdG-~l~V-~e~~g~I~~i~--~g~~~-------~~~~--~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 33 PWALAFLPDG-GMLI-AERPGRIRLFR--EGRLS-------TYAE--LS-VYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp EEEEEECTTS-CEEE-EETTTEEEEEE--TTEEE-------EEEE--CC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred ceEEEEcCCC-eEEE-EeCCCeEEEEE--CCCcc-------Eeec--ce-EeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 3579999986 6554 45669999988 34311 0100 01 11122446789999998 44445432
Q ss_pred C-----CcEEEEEcCCCCCCCCCCCCCccccCCC-CceEeec-ccCceeeeeEEEecCCCcEEEEecC------------
Q 023246 81 D-----ELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYSG-HRNSQTVKGVNFFGPNDEYVMSGSD------------ 141 (285)
Q Consensus 81 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~------------ 141 (285)
. ..|..|+..... +...+ .+..+.. .........++| .|+|.+.++.+.
T Consensus 99 ~~~~~~~~v~r~~~~~~~-----------~~~~~~l~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGER-----------GVLDRVVLDGIPARPHGLHSGGRIAF-GPDGMLYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp CTTSSEEEEEEEEECSSC-----------EEEEEEEEEEECCCTTCCCCCCCEEE-CTTSCEEEECCCTTCGGGGGCTTC
T ss_pred CCCCCccEEEEEEeCCCC-----------cCceEEEEEeCCCCCCCCcCCceEEE-CCCCCEEEEECCCCCCccccCCCC
Confidence 2 678888775320 00001 1111221 011112467887 999987776432
Q ss_pred -CCeEEEEecCC--------------CceEEEEecccccceEeEEcC-CCCeEEEEe
Q 023246 142 -CGHLFIWKKKG--------------GKLVRLMVGDRHVVNQLEPHP-HIPMFATCG 182 (285)
Q Consensus 142 -dg~v~vwd~~~--------------~~~~~~~~~h~~~v~~~~~~p-~~~~l~t~~ 182 (285)
.|.|.-++... ...+. ..++. ....++|+| ++.++++-.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~r-np~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVY-SLGHR-NPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEE-EECCS-EECCCEECTTTCCEEEEEE
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEE-EEcCC-CcccEEEECCCCCEEEEEc
Confidence 25677777652 01121 12333 357789999 666554443
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.62 E-value=0.38 Score=45.03 Aligned_cols=132 Identities=13% Similarity=0.082 Sum_probs=71.1
Q ss_pred CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 82 ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 82 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
|.|++|++... .++.+....-+..+++++- -+|+++++. ...|++|++...+.+..-..
T Consensus 864 Gri~vf~v~~~-----------------kL~lv~~~~v~g~v~al~~--~~g~Lla~i--g~~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 864 GRIVVFQYSDG-----------------KLQTVAEKEVKGAVYSMVE--FNGKLLASI--NSTVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp EEEEEEEEETT-----------------EEEEEEEEEESSCEEEEEE--ETTEEEEEE--TTEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEEEECC-----------------EEEEEEEEEcCCcCEEEee--eCCEEEEEc--CCEEEEEECCCCceEEEEee
Confidence 67999998632 2222222222233888873 356555544 47899999986655441111
Q ss_pred ccccceEeEEcCCCCeEEEEecCCcEEEEcC--CCCCCCCCCC--CcccceeeccccCCCceEEEeCCCCeEEEEEecc
Q 023246 162 DRHVVNQLEPHPHIPMFATCGIEKTVKLWAP--MPTDFPPLPD--NAEKIMKANKQGREDHSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 162 h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~ 236 (285)
+-..|..+.....+.+++.|..-..|.+... ...++..+.. ....+.+. ...+...++.+..+|.+.++....
T Consensus 923 ~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~--~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 923 HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAV--EILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEE--EEEETTEEEEEETTSEEEEEEECT
T ss_pred ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEE--EEEccCcEEEEcCCCcEEEEecCC
Confidence 1122333333335778888887777776543 3322222211 11222222 122334677788899999998765
No 327
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.45 E-value=1.5 Score=34.96 Aligned_cols=103 Identities=19% Similarity=0.243 Sum_probs=60.5
Q ss_pred ceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEee-cccCceeeeeEEEecCC---CcEE-E
Q 023246 63 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYS-GHRNSQTVKGVNFFGPN---DEYV-M 137 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~---~~~l-~ 137 (285)
....++|.|+|+++++-.++.|.+++ .+. ...+..+. ..........+++ +|+ +..| +
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~--------------~~~~~~~~v~~~g~~~p~gia~-~pdf~~~g~lYv 94 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGR--------------LSTYAELSVYHRGESGLLGLAL-HPRFPQEPYVYA 94 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTE--------------EEEEEECCCCCSTTCSEEEEEE-CTTTTTSCEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCC--------------ccEeecceEeecCCCCceeEEE-CCCCCCCCEEEE
Confidence 46799999999988887779999998 220 01111111 0011123788997 887 4444 4
Q ss_pred EecCC-----CeEEEEecCCCc-----eE-EEEe---cccccceEeEEcCCCCeEEEEe
Q 023246 138 SGSDC-----GHLFIWKKKGGK-----LV-RLMV---GDRHVVNQLEPHPHIPMFATCG 182 (285)
Q Consensus 138 ~~~~d-----g~v~vwd~~~~~-----~~-~~~~---~h~~~v~~~~~~p~~~~l~t~~ 182 (285)
+-... +.|..++...+. .+ ..+. ........++|.|+|.+.++.+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 43322 678888876432 11 2233 1112346899999997766644
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.36 E-value=1.6 Score=34.88 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=60.0
Q ss_pred ceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCC-CceEee-cccCceeeeeEEEecCC----CcEE
Q 023246 63 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKRE-EPQVYS-GHRNSQTVKGVNFFGPN----DEYV 136 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~~~~~~~~~----~~~l 136 (285)
....++|.|+|+++++-.++.|++++. .+ + .+..+. ..........+++ +|+ +.+.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G----------------~~~~~~~~v~~~g~~g~~gia~-~pdf~~~g~ly 91 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-SG----------------KKLVASFDVANVGEAGLLGLAL-HPEFPKKSWVY 91 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-SC----------------EEEEEECCCCCSTTCSEEEEEE-CTTTTTSCEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-CC----------------ceEeeccceeecCCCceeeEEe-CCCCCcCCEEE
Confidence 567999999999888877799998863 32 1 111111 0111122788997 886 4444
Q ss_pred EEecC---C----CeEEEEecCCC--c-----eE-EEEec-ccccceEeEEcCCCCeEEEEe
Q 023246 137 MSGSD---C----GHLFIWKKKGG--K-----LV-RLMVG-DRHVVNQLEPHPHIPMFATCG 182 (285)
Q Consensus 137 ~~~~~---d----g~v~vwd~~~~--~-----~~-~~~~~-h~~~v~~~~~~p~~~~l~t~~ 182 (285)
++-+. + ..|..|+.... . .+ ..+.. .......|+|.|++.+.++.+
T Consensus 92 v~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 92 LYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 44332 3 67888887643 1 11 11221 112356799999998766654
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.32 E-value=1.9 Score=35.56 Aligned_cols=170 Identities=8% Similarity=0.069 Sum_probs=102.4
Q ss_pred ccceeEEEEcCCCCcEEEEee------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCC--
Q 023246 3 SIRLNAIVIDPRNPNYFAVGG------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSE-- 74 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~-- 74 (285)
+..|..-..+++..-++++|- -.|.+.+|..+.+. ...+.+|......+....+..
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----------------sQ~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----------------SQPIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----------------EEEECCSEEEEEEEECTTCSSEE
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----------------cchheeeeeeeEEEecCCCCCCc
Confidence 445666677787644444443 24778888887543 223367776655544432221
Q ss_pred -EEEEec----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe-ecccCceeeeeEEEecCCCcEEEEecCCCeEEEE
Q 023246 75 -LLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY-SGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 75 -~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vw 148 (285)
+++-+. .++++|.++....... ..+.. +.+..+ .........-++.. ++....++.-+.-|.+++|
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~-~~f~k------k~vdv~fppe~~~DFPvamqv-s~kygviyviTK~G~i~ly 285 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPK------KAVDVFFPPEAQNDFPVAMQI-SEKHDVVFLITKYGYIHLY 285 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTC-CCCCC------EEEECCCCTTSTTCCEEEEEE-ETTTTEEEEEETTSEEEEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCC-CCccc------eeeeeeCCcccccCceeEEEe-cccCCEEEEEecCceEEEE
Confidence 333332 4789999996541000 01100 011111 11111122455665 7777788888999999999
Q ss_pred ecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
|++++.++..-+-....|..-+-+....-++.....|.|.--.++...
T Consensus 286 DleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 286 DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred ecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 999999998777666777766666666667777888888777776554
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.20 E-value=1.7 Score=40.79 Aligned_cols=148 Identities=9% Similarity=0.101 Sum_probs=84.9
Q ss_pred EcCCCCcEEEEee----------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEec
Q 023246 11 IDPRNPNYFAVGG----------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYN 80 (285)
Q Consensus 11 ~s~~~~~~l~tg~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~ 80 (285)
|..+...+|+.|+ ..|.|.+|++..+++ ...+. ....++|++++-- +| +|+++-
T Consensus 839 ~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL-------------~lv~~-~~v~g~v~al~~~-~g-~Lla~i 902 (1158)
T 3ei3_A 839 LGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL-------------QTVAE-KEVKGAVYSMVEF-NG-KLLASI 902 (1158)
T ss_dssp CTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE-------------EEEEE-EEESSCEEEEEEE-TT-EEEEEE
T ss_pred EccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE-------------EEEEE-EEcCCcCEEEeee-CC-EEEEEc
Confidence 4443347888886 357899999874331 11111 2235678887643 34 666677
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEe--cCCCceEEE
Q 023246 81 DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWK--KKGGKLVRL 158 (285)
Q Consensus 81 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd--~~~~~~~~~ 158 (285)
..+|++|++... +.++ ....... .+..+.. ...+++++.|..-..|.++. ...++....
T Consensus 903 g~~l~vy~l~~~----------------~~L~-~~~~~~~-~i~~~~l-~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 903 NSTVRLYEWTTE----------------KELR-TECNHYN-NIMALYL-KTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp TTEEEEEEECTT----------------SCEE-EEEEECC-CSCEEEE-EEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCC----------------ceEE-EEeeccc-cEEEEEE-eccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 789999999764 2222 1111100 0222221 23467888888776666654 443333322
Q ss_pred Ee-cccccceEeEEcCCCCeEEEEecCCcEEEEcCCC
Q 023246 159 MV-GDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 159 ~~-~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~ 194 (285)
-. .+...++++.+-.+ ..++.+..+|.+.+.....
T Consensus 964 a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 22 23456777777644 4677788999999886543
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.00 E-value=0.84 Score=36.27 Aligned_cols=22 Identities=23% Similarity=0.614 Sum_probs=15.7
Q ss_pred cEEEEeeC-C---------CcEEEEEccCCcc
Q 023246 17 NYFAVGGS-D---------EYARVYDIRKCHW 38 (285)
Q Consensus 17 ~~l~tg~~-d---------g~v~iwd~~~~~~ 38 (285)
.+++.|+. + ..+.+||+.+.+.
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 67777776 2 4688899887753
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.97 E-value=1.7 Score=33.82 Aligned_cols=65 Identities=17% Similarity=0.242 Sum_probs=35.8
Q ss_pred CCCcEEEEecC------CCeEEEEecCCCceEEE--EecccccceEeEEcCCCCeEEEEecC-----CcEEEEcCCCCCC
Q 023246 131 PNDEYVMSGSD------CGHLFIWKKKGGKLVRL--MVGDRHVVNQLEPHPHIPMFATCGIE-----KTVKLWAPMPTDF 197 (285)
Q Consensus 131 ~~~~~l~~~~~------dg~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~t~~~d-----~~i~iwd~~~~~~ 197 (285)
.+++.++.|+. -..+.+||..+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+...
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 35667777764 23588999887653322 1111111122222 56677777643 2577889877653
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.92 E-value=0.057 Score=42.90 Aligned_cols=111 Identities=9% Similarity=0.091 Sum_probs=67.8
Q ss_pred CcEEEEecCCCeEEEEecCCCceEEEEecc-cccceEeEE--cC-CCCeEEEE-ecCCcEEEEcCCCCCCCCCCCCcccc
Q 023246 133 DEYVMSGSDCGHLFIWKKKGGKLVRLMVGD-RHVVNQLEP--HP-HIPMFATC-GIEKTVKLWAPMPTDFPPLPDNAEKI 207 (285)
Q Consensus 133 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h-~~~v~~~~~--~p-~~~~l~t~-~~d~~i~iwd~~~~~~~~~~~~~~~~ 207 (285)
+..++.++.||.|+-+|..+|+.+.++... ..++....- .+ ++..++.. ..||.|..++..++... +.......
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccc
Confidence 347888999999999999999999988754 122222110 01 22333333 57999999998766321 11011111
Q ss_pred eeecccc-------------CCCceEEEeCCCCeEEEEEecccccceeEe
Q 023246 208 MKANKQG-------------REDHSRITLTPDVIMHVLRLQRRQTLAYRE 244 (285)
Q Consensus 208 ~~~~~~~-------------~~~~~~~~~s~d~~i~vwd~~~~~~~~~~~ 244 (285)
+...... ..+..+++++.++.+...|+.+++.+-.+.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1000000 134578899999999999999988776653
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.67 E-value=1.6 Score=41.69 Aligned_cols=149 Identities=11% Similarity=0.194 Sum_probs=88.5
Q ss_pred EEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEE
Q 023246 67 LAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLF 146 (285)
Q Consensus 67 i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~ 146 (285)
.-.+|..+.+|--...++.|||+.+. ..++. |.....|.--.|.++ +.++..+ +..|+
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k----------------~klks---~~~~e~VvfWkWis~--~~l~lVT-~~aVy 128 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMK----------------SKMKA---HTMTDDVTFWKWISL--NTVALVT-DNAVY 128 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHh----------------hhhcc---cccCCCceEEEecCC--CeeEEEc-CCeEE
Confidence 44567777777756889999999876 33333 333223444443233 3333333 46799
Q ss_pred EEecCC-CceEEEEecc----cccceEeEEcCCCCeEEEEe-------cCCcEEEEcCCCCCCCCCCCCcccceeecccc
Q 023246 147 IWKKKG-GKLVRLMVGD----RHVVNQLEPHPHIPMFATCG-------IEKTVKLWAPMPTDFPPLPDNAEKIMKANKQG 214 (285)
Q Consensus 147 vwd~~~-~~~~~~~~~h----~~~v~~~~~~p~~~~l~t~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 214 (285)
-|++.. ..+...+..| ...|.....+++.++++..| -.|.+.+|..+.+..+.+.+|...........
T Consensus 129 HW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~ 208 (1630)
T 1xi4_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 208 (1630)
T ss_pred EeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCC
Confidence 999963 3444444433 35677778899999965443 24788999988777667777765543332221
Q ss_pred C-CCceEEEeCC----CCeEEEEEeccc
Q 023246 215 R-EDHSRITLTP----DVIMHVLRLQRR 237 (285)
Q Consensus 215 ~-~~~~~~~~s~----d~~i~vwd~~~~ 237 (285)
. ....+++... .+.++|-++...
T Consensus 209 ~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred CCCCceEEEEEEecCCCceEEEEecCCC
Confidence 1 1122333322 278999998653
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.52 E-value=2.3 Score=33.87 Aligned_cols=153 Identities=10% Similarity=0.076 Sum_probs=76.2
Q ss_pred eeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC----CCEEEEe-c
Q 023246 6 LNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT----SELLISY-N 80 (285)
Q Consensus 6 v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~----~~~l~s~-~ 80 (285)
-..|+|.|++ +.|+.+...|.|++++.. +.... .+.. ...+..........|+|+|+ +.+.++. .
T Consensus 20 P~~i~~~pdG-~~l~V~e~~G~i~~~~~~-g~~~~------~~~~--~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~ 89 (353)
T 2g8s_A 20 PWALAFLPDN-HGMLITLRGGELRHWQAG-KGLSA------PLSG--VPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSE 89 (353)
T ss_dssp EEEEEECSTT-CCEEEEETTTEEEEEETT-TEECC------CCBS--CCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred cEEEEEcCCC-CEEEEEeCCceEEEEeCC-Cceee------EecC--CcccccCCCCCceeEEECCCCCCCCEEEEEEeC
Confidence 4689999986 624455567999988853 32110 0110 01111122345789999995 5555542 2
Q ss_pred -------CCcEEEEEcCCCCCCCCCCCCCccccCCCCc-eEeecc-cCceeeeeEEEecCCCcEEEEecC----------
Q 023246 81 -------DELVYLFEKNMGLGPSPLSLSPEDLQKREEP-QVYSGH-RNSQTVKGVNFFGPNDEYVMSGSD---------- 141 (285)
Q Consensus 81 -------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~---------- 141 (285)
...|..|+..... ..+...+.+ ..+... ........+.| .|++.+.++.+.
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~---------~~~~~~~~i~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~Gd~~~~~~~q~~ 159 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDL---------SKVTDFRTVFRQMPKLSTGNHFGGRLVF-DGKGYLFIALGENNQRPTAQDL 159 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTS---------SBEEEEEEEEECSSCCBSSSCCCCCEEE-CSSSEEEEEECCTTCGGGGGCT
T ss_pred CCCCCCceeEEEEEEECCCC---------CCCCceEEEEEECCCCCCCcccCccEEE-CCCCcEEEEECCCCCCCccCCC
Confidence 1346666654320 000000000 011100 01111457887 999977666543
Q ss_pred ---CCeEEEEecCCC--------------ceEEEEecccccceEeEEcC-CCCeEEE
Q 023246 142 ---CGHLFIWKKKGG--------------KLVRLMVGDRHVVNQLEPHP-HIPMFAT 180 (285)
Q Consensus 142 ---dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~p-~~~~l~t 180 (285)
.|.|.-++.... ..+.. .+|. ....++|+| ++.++++
T Consensus 160 ~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 160 DKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-YGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-ECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE-EcCc-CccceEEECCCCCEEEE
Confidence 256777776532 11211 2343 467899999 5655443
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.48 E-value=3.9 Score=36.34 Aligned_cols=191 Identities=12% Similarity=0.091 Sum_probs=98.3
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
...|.++....++ .|..|+.+| +..||..+.+... .. ......|.++.. .+|.+.++..+
T Consensus 62 ~~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~~~f~~------------~~---~~~~~~i~~i~~-~~g~lWigt~~- 121 (758)
T 3ott_A 62 NTRIYCGVIIDNT--YLYMGTDNG-ILVYNYRADRYEQ------------PE---TDFPTDVRTMAL-QGDTLWLGALN- 121 (758)
T ss_dssp SSCEEEEEEETTT--EEEEEETTE-EEEEETTTTEECC------------CS---CCCCSCEEEEEE-ETTEEEEEETT-
T ss_pred CceEEEEEEcCCC--cEEEEeCCC-eEEEeCCCCEEEC------------cc---cCCCceEEEEEe-cCCcEEEEcCC-
Confidence 3467888777753 555666655 7789987654211 00 111234676654 45655554444
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc---cCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH---RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLM 159 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 159 (285)
-|..++..+. ....+... .....|.++.. +.++.+.+. +.. -|..++..+++.....
T Consensus 122 Gl~~~~~~~~-----------------~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 122 GLYTYQLQSR-----------------KLTSFDTRRNGLPNNTIYSIIR-TKDNQIYVG-TYN-GLCRYIPSNGKFEGIP 181 (758)
T ss_dssp EEEEEETTTC-----------------CEEEECHHHHCCSCSCEEEEEE-CTTCCEEEE-ETT-EEEEEETTTTEEEEEC
T ss_pred cceeEeCCCC-----------------eEEEeccCCCCcCCCeEEEEEE-cCCCCEEEE-eCC-CHhhCccCCCceEEec
Confidence 6888887654 22223110 01123777775 677776654 434 4778887765433211
Q ss_pred -ecc----cccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCC-cccceeeccccCCCceEEEeCCCCeEEEEE
Q 023246 160 -VGD----RHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN-AEKIMKANKQGREDHSRITLTPDVIMHVLR 233 (285)
Q Consensus 160 -~~h----~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd 233 (285)
... ...|.++...+++..|..+.. +-+..++.....+..+... ...+..+. ... ...+..++. +-+.+++
T Consensus 182 ~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~-~d~-~g~lWigT~-~Gl~~~~ 257 (758)
T 3ott_A 182 LPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLA-LDG-NGDLLAGTD-NGLYVYH 257 (758)
T ss_dssp CCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEE-ECT-TCCEEEEET-TEEEEEC
T ss_pred CCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEE-EcC-CCCEEEEeC-CceeEEe
Confidence 111 124778888777664434443 3477788766543222111 11122221 122 233444554 4567777
Q ss_pred eccc
Q 023246 234 LQRR 237 (285)
Q Consensus 234 ~~~~ 237 (285)
..+.
T Consensus 258 ~~~~ 261 (758)
T 3ott_A 258 NDTT 261 (758)
T ss_dssp CTTS
T ss_pred cCCC
Confidence 6544
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.33 E-value=4.1 Score=36.17 Aligned_cols=169 Identities=12% Similarity=0.027 Sum_probs=91.5
Q ss_pred cceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccC-CCCCcceEEEEEecCCCEEEEecCC
Q 023246 4 IRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLI-GKNNIHITGLAYSNTSELLISYNDE 82 (285)
Q Consensus 4 ~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~i~~s~~~~~l~s~~d~ 82 (285)
..|.++.-.+++ .+ -.|+ ++-+..||..+++.... ...... ......|.++...++|.+.++...+
T Consensus 373 ~~v~~i~~d~~g-~l-Wigt-~~GL~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~ 439 (758)
T 3ott_A 373 NRIRHIYEDKEQ-QL-WIAT-DGSINRYDYATRQFIHY----------NIVDNTGTYNTNWTYYIFEDTAGQLWISTCLG 439 (758)
T ss_dssp SCEEEEEECTTS-CE-EEEE-TTEEEEEETTTTEEEEE----------EEECCC--CBSSSEEEEEECTTSEEEEEESSS
T ss_pred CceEEEEECCCC-CE-EEEe-CCcHhhcCcCCCcEEEe----------ecCCCcCCCCCceEEEEEEcCCCCEEEEECCC
Confidence 457788777764 44 3455 45688899877653211 000000 0123468888888888776666556
Q ss_pred cEEEEEcCCCCCCCCCCCCCccccCCCCc---eEeeccc--CceeeeeEEEecCCCcEEEE-ecCCCeEEEEecCCCceE
Q 023246 83 LVYLFEKNMGLGPSPLSLSPEDLQKREEP---QVYSGHR--NSQTVKGVNFFGPNDEYVMS-GSDCGHLFIWKKKGGKLV 156 (285)
Q Consensus 83 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~i~~~~~~~~~~~~l~~-~~~dg~v~vwd~~~~~~~ 156 (285)
-|.+++..+... ...... ..+.... ....|.++.. +.++++.+. ++. +-|..+|..+++..
T Consensus 440 Gl~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWi~~~t~-~Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 440 GIFVVDKHKLMQ-----------STSGQYIAEQNYSVHNGLSGMFINQIIP-DNEGNVWVLLYNN-KGIDKINPRTREVT 506 (758)
T ss_dssp CEEEEEHHHHHH-----------CCSSEEECSEEECGGGTCSCSCEEEEEE-CTTSCEEEEETTC-SSEEEEETTTTEEE
T ss_pred ceEEEccccccc-----------cCCcceecccccccccccccceeeeEEE-cCCCCEEEEccCC-CCcEEEeCCCCceE
Confidence 688888642100 000000 1111100 1123788875 888887763 444 45888898766544
Q ss_pred EEEec---ccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCC
Q 023246 157 RLMVG---DRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPL 200 (285)
Q Consensus 157 ~~~~~---h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~ 200 (285)
..... ....+.++....+|.+.+. +..| +..+++.......+
T Consensus 507 ~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~~ 551 (758)
T 3ott_A 507 KLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQSI 551 (758)
T ss_dssp EECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCCBC
T ss_pred EecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceEEe
Confidence 32111 1245778888888877544 3444 78888876655433
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.97 E-value=2.5 Score=35.04 Aligned_cols=106 Identities=12% Similarity=0.165 Sum_probs=59.3
Q ss_pred ceEEEEEecCCCEEEEecC-CcEEEEEcCCCCCCCCCCCCCccccCCCCceEeec----ccCceeeeeEEEecCC---Cc
Q 023246 63 HITGLAYSNTSELLISYND-ELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSG----HRNSQTVKGVNFFGPN---DE 134 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~---~~ 134 (285)
..+.++|.|+|+++++-.. +.|++++...+. ...+..+.. ......+..+++ +|+ +.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~--------------~~~~~~~~~~~~~~~g~~Gllgia~-~Pdf~~~g 92 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGS--------------VKTVFQVPEIVNDADGQNGLLGFAF-HPDFKNNP 92 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------------EEEEEECTTCCCCTTSSCSEEEEEE-CTTTTTSC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCc--------------EeEEecCCccccccCCCCceeEEEE-CCCcCcCC
Confidence 5679999999999998765 468888754331 001111111 011123778997 884 44
Q ss_pred EE-EEecC------------CCeEEEEecCCC--c-----eEE-EEec-ccccceEeEEcCCCCeEEEEec
Q 023246 135 YV-MSGSD------------CGHLFIWKKKGG--K-----LVR-LMVG-DRHVVNQLEPHPHIPMFATCGI 183 (285)
Q Consensus 135 ~l-~~~~~------------dg~v~vwd~~~~--~-----~~~-~~~~-h~~~v~~~~~~p~~~~l~t~~~ 183 (285)
.| ++-+. ...|.-+++... + .+. .+.. .......|+|.|+|.+.++.+.
T Consensus 93 ~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 93 YIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 44 44332 235666665432 1 121 1221 1234688999999988666553
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.23 E-value=3.1 Score=31.96 Aligned_cols=146 Identities=10% Similarity=0.093 Sum_probs=70.5
Q ss_pred ceEEEEEecCCCEEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCC
Q 023246 63 HITGLAYSNTSELLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDC 142 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 142 (285)
.|..|+......+++ . ++.|+.|-..... .+..-.... ..|..++. ......++ . +
T Consensus 103 ~v~~ia~G~~hs~al-~-~G~v~~wG~n~~g----------------qlg~~~~~~--~~i~~i~~-G~~~~~~l--~-~ 158 (282)
T 3qhy_B 103 GVDAIAAGAWASYAL-K-DGKVIAWGDDSDG----------------QTTVPAEAQ--SGVTALDG-GVYTALAV--K-N 158 (282)
T ss_dssp SEEEEEEETTEEEEE-E-TTEEEEEECCTTS----------------TTSCCGGGG--SSEEEEEE-CSSEEEEE--E-T
T ss_pred CeEEEECcCCEEEEE-e-CCeEEEecCCCCC----------------cCCCCccCC--CCeEEEEc-ccCEEEEE--E-C
Confidence 566666544433333 4 8888888765431 111000111 22677765 33322222 3 6
Q ss_pred CeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCC-CcccceeeccccCCCceEE
Q 023246 143 GHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPD-NAEKIMKANKQGREDHSRI 221 (285)
Q Consensus 143 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (285)
|.|+.|-......+..-..-...|..++.-... .++. .||.|..|-....-..-++. ....+..+.. .....+
T Consensus 159 G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~---G~~h~~ 232 (282)
T 3qhy_B 159 GGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS---GEWYSL 232 (282)
T ss_dssp TEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE---CSSCEE
T ss_pred CEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEc---CCCEEE
Confidence 999999765322211111112456666654332 2443 59999999764332111111 1112222221 122344
Q ss_pred EeCCCCeEEEEEeccccc
Q 023246 222 TLTPDVIMHVLRLQRRQT 239 (285)
Q Consensus 222 ~~s~d~~i~vwd~~~~~~ 239 (285)
+.. |+.++.|-.....+
T Consensus 233 al~-~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 233 ALK-NGKVIAWGSSRTAP 249 (282)
T ss_dssp EEE-TTEEEEESTTCCCC
T ss_pred EEE-CCEEEEecCCCCcc
Confidence 445 99999996555433
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.23 E-value=2 Score=36.61 Aligned_cols=112 Identities=5% Similarity=-0.085 Sum_probs=65.7
Q ss_pred ceEEEEEecCCCEEEEe-c-CCcEEEEEcCCCCCCCCCCCCCccccCCCC-ceEeecccCceeeeeEEEecCCCcEEEEe
Q 023246 63 HITGLAYSNTSELLISY-N-DELVYLFEKNMGLGPSPLSLSPEDLQKREE-PQVYSGHRNSQTVKGVNFFGPNDEYVMSG 139 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 139 (285)
....+.++|+|++++.+ . +.++.++|+....... ....+..... ....+. .......+| +++|+-..+-
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~----~~k~~~~~~~~~ae~e~---GlGPlHt~F-d~~G~aYTtl 395 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLF----AGKLADPRDVIVGEPEL---GLGPLHTTF-DGRGNAYTTL 395 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHH----TTCCSCGGGGEEECCBC---CSCEEEEEE-CSSSEEEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhh----hccccCcccceEeeccC---CCcccEEEE-CCCCceEeee
Confidence 44568899999988875 3 9999999997421000 0000000000 111111 122567787 8999666777
Q ss_pred cCCCeEEEEecCCC----------ceEEEEecccccceEe-----EEcCCCCeEEEEe
Q 023246 140 SDCGHLFIWKKKGG----------KLVRLMVGDRHVVNQL-----EPHPHIPMFATCG 182 (285)
Q Consensus 140 ~~dg~v~vwd~~~~----------~~~~~~~~h~~~v~~~-----~~~p~~~~l~t~~ 182 (285)
.-|..|..|++... ..+..+..|.++-.-. .-.|+|++|++..
T Consensus 396 fidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 396 FIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp TTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 78999999998643 3555665554332211 2257788887775
No 341
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.72 E-value=4.2 Score=32.45 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=82.6
Q ss_pred ceEEEEEecCCCEEEEe-------------cCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc--c-CceeeeeE
Q 023246 63 HITGLAYSNTSELLISY-------------NDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH--R-NSQTVKGV 126 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~~~ 126 (285)
....+...|+|..++++ .+|.|.++|...... +.+.+ .+.+. . ..-....+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~------------~~~~l-~~~g~~~~~~~f~PhGi 117 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP------------AVSEL-EIIGNTLDISSFNPHGI 117 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSC------------CEEEC-EEECSSCCGGGCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC------------ceEEE-EccCCCCCcCceeeeee
Confidence 44567788888776665 588999999874310 00111 12221 0 01125566
Q ss_pred EEec-CCCc--EEEEecC--CCeEEEEecCCC-ce---EEEEecc-cccceEeEEcCCCCeEEEEec-------------
Q 023246 127 NFFG-PNDE--YVMSGSD--CGHLFIWKKKGG-KL---VRLMVGD-RHVVNQLEPHPHIPMFATCGI------------- 183 (285)
Q Consensus 127 ~~~~-~~~~--~l~~~~~--dg~v~vwd~~~~-~~---~~~~~~h-~~~v~~~~~~p~~~~l~t~~~------------- 183 (285)
.++. .++. ++++-.. +..|.+|++... .. +..+.+. -...+.+++.++|.+.++...
T Consensus 118 ~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~ 197 (355)
T 3sre_A 118 STFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMH 197 (355)
T ss_dssp EEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHH
T ss_pred EEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhh
Confidence 6533 2343 3444332 567788876543 22 2233322 245788999999987776541
Q ss_pred ----CCcEEEEcCCCCCCCCCCCCcccceeeccccCCC-ceEEEeCCCCeEEEEEecc
Q 023246 184 ----EKTVKLWAPMPTDFPPLPDNAEKIMKANKQGRED-HSRITLTPDVIMHVLRLQR 236 (285)
Q Consensus 184 ----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~d~~i~vwd~~~ 236 (285)
.|.|.-++. +.+..+........-+.+ ++++ .++++-+..+.|+.|++..
T Consensus 198 ~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~-spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 198 LGLAWSFVTYYSP--NDVRVVAEGFDFANGINI-SPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TTCCCEEEEEECT--TCCEEEEEEESSEEEEEE-CTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccCCccEEEEEEC--CeEEEeecCCcccCcceE-CCCCCEEEEEeCCCCeEEEEEECC
Confidence 234444554 222211111111222322 3333 4666777789999999874
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.62 E-value=4.9 Score=31.21 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=60.8
Q ss_pred EEEecCCCEEEEec-----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEec-
Q 023246 67 LAYSNTSELLISYN-----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGS- 140 (285)
Q Consensus 67 i~~s~~~~~l~s~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~- 140 (285)
..|+++++.|+-.. ...|+..++... ....+..+. + ..+ +++++.|+-.+
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-----------------~~~~lt~~~----~--~~~-~~~g~~iy~t~~ 164 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE-----------------EKKKIKNHY----L--FTC-NTSDRYFYYNNP 164 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC-----------------CCEEEESSC----C--CCS-EEETTEEEEECT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC-----------------CeEEEeCCC----c--eEe-eEECCEEEEEeC
Confidence 36788887665432 445666666543 334454433 2 233 55677766544
Q ss_pred CCCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEecC--CcEEEEcCCCCCCCCC
Q 023246 141 DCGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIE--KTVKLWAPMPTDFPPL 200 (285)
Q Consensus 141 ~dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d--~~i~iwd~~~~~~~~~ 200 (285)
....|++.++..+.....+.+ ... ..++|++.+|+-.... ..|..-++.+.....+
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L 222 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL 222 (302)
T ss_dssp TTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC
T ss_pred CCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE
Confidence 467899999886654433332 222 3456888887765533 3566667776654444
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.62 E-value=8.5 Score=33.92 Aligned_cols=66 Identities=11% Similarity=0.149 Sum_probs=39.8
Q ss_pred CCCcEEEEecCCC--eEEEEecCCCceEEEE-----ecccccceEeEEcCC-CCeEEEEec--C-----CcEEEEcCCCC
Q 023246 131 PNDEYVMSGSDCG--HLFIWKKKGGKLVRLM-----VGDRHVVNQLEPHPH-IPMFATCGI--E-----KTVKLWAPMPT 195 (285)
Q Consensus 131 ~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~~p~-~~~l~t~~~--d-----~~i~iwd~~~~ 195 (285)
.+++.++.|+.++ .+.+||..+.+-...- ........++.+... ++.++.|+. + ..+..||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4777888887654 6899998876533211 111222233555554 667777765 2 35888998766
Q ss_pred C
Q 023246 196 D 196 (285)
Q Consensus 196 ~ 196 (285)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 5
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.04 E-value=9.7 Score=36.63 Aligned_cols=170 Identities=8% Similarity=0.054 Sum_probs=92.7
Q ss_pred ccceeEEEEcCCCCcEEEEee------CCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecC---C
Q 023246 3 SIRLNAIVIDPRNPNYFAVGG------SDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNT---S 73 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~---~ 73 (285)
+..|..-..+++..-++++|- ..|.+.+|....+. ...+.||......+..... .
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----------------sQ~iegha~~F~~~~~~~~~~~~ 213 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----------------SQPIEGHAASFAQFKMEGNAEES 213 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----------------chhhhHhHhhhheeccCCCCCCc
Confidence 445666667776544444443 35788888887553 1222555554444433221 1
Q ss_pred CEEEEec----CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecc-cCceeeeeEEEecCCCcEEEEecCCCeEEEE
Q 023246 74 ELLISYN----DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGH-RNSQTVKGVNFFGPNDEYVMSGSDCGHLFIW 148 (285)
Q Consensus 74 ~~l~s~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vw 148 (285)
.+++-+. .++++|.++....... ..+.. +.+..+... .......++.. ++....+..-+.-|.+++|
T Consensus 214 ~l~~f~~~~~~g~kLhi~Ei~~~~~~~-~~f~k------k~~~~~~~~~~~~Dfpv~~~v-s~k~g~iy~itk~G~~~~~ 285 (1630)
T 1xi4_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGN-QPFPK------KAVDVFFPPEAQNDFPVAMQI-SEKHDVVFLITKYGYIHLY 285 (1630)
T ss_pred eEEEEEEecCCCceEEEEecCCCccCC-CCCcc------ccccccCCcccccCcceEEEe-ccccCEEEEEecCceEEEE
Confidence 2333232 4789999986541111 11100 111111111 11112344554 6777778888899999999
Q ss_pred ecCCCceEEEEecccccceEeEEcCCCCeEEEEecCCcEEEEcCCCCC
Q 023246 149 KKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCGIEKTVKLWAPMPTD 196 (285)
Q Consensus 149 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~ 196 (285)
|+.++.++..-+-...+|...+-++...-++.....|.|.--.+....
T Consensus 286 d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 286 DLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred ecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 999999886555444555555544444446666677776666655444
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.16 E-value=8.5 Score=30.56 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=57.8
Q ss_pred ceEEEEEecCCC-EEEEecCCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCC----CcEEE
Q 023246 63 HITGLAYSNTSE-LLISYNDELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPN----DEYVM 137 (285)
Q Consensus 63 ~v~~i~~s~~~~-~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~ 137 (285)
....++|.|+|+ ++++...+.|++++...... . .+.. ....+..... ....+++ +|+ +.+.+
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~---~-----~~~~--~~~v~~~g~~--g~~gia~-~pdf~~~g~lYv 85 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLS---A-----PLSG--VPDVWAHGQG--GLLDVVL-APDFAQSRRIWL 85 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEEC---C-----CCBS--CCCCCCSTTC--SEEEEEE-CTTHHHHCEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCcee---e-----EecC--CcccccCCCC--CceeEEE-CCCCCCCCEEEE
Confidence 467999999999 88877789999998532200 0 0000 0001111122 2678997 885 44444
Q ss_pred EecC-------CCeEEEEecCCC--c--eEEEE-ec------ccccceEeEEcCCCCeEEEEe
Q 023246 138 SGSD-------CGHLFIWKKKGG--K--LVRLM-VG------DRHVVNQLEPHPHIPMFATCG 182 (285)
Q Consensus 138 ~~~~-------dg~v~vwd~~~~--~--~~~~~-~~------h~~~v~~~~~~p~~~~l~t~~ 182 (285)
+-+. ...|..|++... + ....+ .. .......|+|.|++.+.++.+
T Consensus 86 ~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 86 SYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred EEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 4322 235666766532 1 11111 11 112246799999997665554
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.10 E-value=16 Score=33.61 Aligned_cols=37 Identities=11% Similarity=-0.052 Sum_probs=31.7
Q ss_pred eeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 123 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 123 i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
+.+++. .++..++++-+.|+++++|++.+++++.+..
T Consensus 238 ~~~~~~-~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEE-ETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEee-cCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 666665 6788899999999999999999999988753
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.86 E-value=8.1 Score=29.98 Aligned_cols=101 Identities=6% Similarity=-0.053 Sum_probs=54.2
Q ss_pred EecCCCcEEEEecC--------------CCeEEEEecCCCceEEEEecccccceEeEEcCCCCeEEEEe----cCCcEEE
Q 023246 128 FFGPNDEYVMSGSD--------------CGHLFIWKKKGGKLVRLMVGDRHVVNQLEPHPHIPMFATCG----IEKTVKL 189 (285)
Q Consensus 128 ~~~~~~~~l~~~~~--------------dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~t~~----~d~~i~i 189 (285)
++++++.+|+-... ...|+..++..++... +.. .. ...|+|++++|+-.. ....|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 34677887766544 3468888887665333 221 11 236777888877665 2345666
Q ss_pred EcCCCCCCCCCCCCcccceeeccccCCCc-eEEEeCCCCeEEEEEecccc
Q 023246 190 WAPMPTDFPPLPDNAEKIMKANKQGREDH-SRITLTPDVIMHVLRLQRRQ 238 (285)
Q Consensus 190 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~d~~i~vwd~~~~~ 238 (285)
.++.+.....+..+.. ... ...++ +..+.....+|++.++....
T Consensus 134 ~~~dGs~~~~lt~~~~--~~~---~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL--FTC---NTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EETTSCCCEEEESSCC--CCS---EEETTEEEEECTTTCCEEEEETTTTE
T ss_pred EECCCCCeEEEeCCCc--eEe---eEECCEEEEEeCCCceEEEEECCCCC
Confidence 6666554443332221 111 22223 33343335677777766543
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.28 E-value=8.4 Score=29.52 Aligned_cols=183 Identities=14% Similarity=0.112 Sum_probs=91.0
Q ss_pred ceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEecCCcE
Q 023246 5 RLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISYNDELV 84 (285)
Q Consensus 5 ~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~~d~~i 84 (285)
.|..++.... ..++. . ||.|..|-....-.+. .|. .....|..++......+++ .|+.|
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg-----~p~----------~~~~~i~~ia~G~~hs~~l--~~G~v 83 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLT-----MPA----------ATQSGVDAIAAGNYHSLAL--KDGEV 83 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTS-----CCG----------GGGSCCCEEEECSSEEEEE--ETTEE
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCC-----CCc----------cCCCCEEEEEeCCCEEEEE--ECCEE
Confidence 4667776653 34444 4 8999999865432110 000 0122455665544333333 38999
Q ss_pred EEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEecccc
Q 023246 85 YLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVGDRH 164 (285)
Q Consensus 85 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~ 164 (285)
+.|-........ ....+ .. .|..++. ......+ -. +|.|+.|-....-.+........
T Consensus 84 ~~wG~n~~Gqlg-------------~P~~~---~~--~v~~ia~-G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~~~~~ 141 (282)
T 3qhy_B 84 IAWGGNEDGQTT-------------VPAEA---RS--GVDAIAA-GAWASYA--LK-DGKVIAWGDDSDGQTTVPAEAQS 141 (282)
T ss_dssp EEEECCTTSTTC-------------CCGGG---SS--SEEEEEE-ETTEEEE--EE-TTEEEEEECCTTSTTSCCGGGGS
T ss_pred EEeeCCCCCCCC-------------CCccc---CC--CeEEEEC-cCCEEEE--Ee-CCeEEEecCCCCCcCCCCccCCC
Confidence 999876441100 00000 11 2777775 4333333 34 89999997654222111111234
Q ss_pred cceEeEEcCCCCeEEEEecCCcEEEEcCCCCCCCCCCCC-cccceeeccccCCCceEEEeCCCCeEEEEEeccc
Q 023246 165 VVNQLEPHPHIPMFATCGIEKTVKLWAPMPTDFPPLPDN-AEKIMKANKQGREDHSRITLTPDVIMHVLRLQRR 237 (285)
Q Consensus 165 ~v~~~~~~p~~~~l~t~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~d~~i~vwd~~~~ 237 (285)
.|..++.-.... ++ -. ||.|..|-....-....+.. ...+..+.. .....++. .+|.++.|-....
T Consensus 142 ~i~~i~~G~~~~-~~-l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~---G~~hs~al-~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 142 GVTALDGGVYTA-LA-VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAG---GIFHSLAL-KDGKVIAWGDNRY 208 (282)
T ss_dssp SEEEEEECSSEE-EE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEE---CSSEEEEE-ETTEEEEEECCTT
T ss_pred CeEEEEcccCEE-EE-EE-CCEEEEecCCCCCCCCCceecCCCeEEEEe---cCCEEEEE-ECCeEEEEECCCC
Confidence 566666543322 22 23 79999997643221111111 122333322 12233444 6999999976554
No 349
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.13 E-value=9.9 Score=30.21 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=61.6
Q ss_pred cceEEEEEecCCCEEEEec-CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEe----ecccCceeeeeEEEecCC----
Q 023246 62 IHITGLAYSNTSELLISYN-DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVY----SGHRNSQTVKGVNFFGPN---- 132 (285)
Q Consensus 62 ~~v~~i~~s~~~~~l~s~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~---- 132 (285)
...+.++|.|+|.++++-. .|.|++++...+. ...+..+ .... .....+++ +|+
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~--------------~~~v~~~~~v~~~g~--~GllGia~-~Pdf~~~ 94 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR--------------KTELGEVPGVSPSGE--GGLLGIAL-SPDYASD 94 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------------EEEEEECTTCCCBTT--BSEEEEEE-CTTHHHH
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCc--------------EeeecccCceeecCC--CCceeeEe-ccccccC
Confidence 3578999999999999976 8999998765431 0011111 1112 23788997 885
Q ss_pred CcEEEE--ecCCCeEEEEecCCC----------ceE-EEEe-cccccceEeEEcCCCCeEEEEe
Q 023246 133 DEYVMS--GSDCGHLFIWKKKGG----------KLV-RLMV-GDRHVVNQLEPHPHIPMFATCG 182 (285)
Q Consensus 133 ~~~l~~--~~~dg~v~vwd~~~~----------~~~-~~~~-~h~~~v~~~~~~p~~~~l~t~~ 182 (285)
+.+.++ ...++.|.-|.+..+ +.+ ..+. .....-..|+|.|++.+.++.+
T Consensus 95 g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 95 HMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp CEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 433332 234566776765541 112 2232 1122356799999998877755
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.37 E-value=17 Score=30.27 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=22.9
Q ss_pred ceEEEEEecCCC--EEEEecCCcEEEEEcC
Q 023246 63 HITGLAYSNTSE--LLISYNDELVYLFEKN 90 (285)
Q Consensus 63 ~v~~i~~s~~~~--~l~s~~d~~i~iwd~~ 90 (285)
..+.|+|.|+|. +|++-..|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 467899999995 8888779999999753
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.35 E-value=23 Score=31.16 Aligned_cols=146 Identities=14% Similarity=0.183 Sum_probs=73.3
Q ss_pred cEEEEeeCC------CcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEE-ec--CCcEEEE
Q 023246 17 NYFAVGGSD------EYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLIS-YN--DELVYLF 87 (285)
Q Consensus 17 ~~l~tg~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s-~~--d~~i~iw 87 (285)
.+++.|+.+ ..+.+||..+.+....-. ...-...| +++...++++++. |. ++.+.+|
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~---------~p~~R~~h-----~~~~~~~~~iyv~GG~~~~~~v~~y 518 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKS---------LSHTRFRH-----SACSLPDGNVLILGGVTEGPAMLLY 518 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCC---------CSBCCBSC-----EEEECTTSCEEEECCBCSSCSEEEE
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCC---------CCCCcccc-----eEEEEcCCEEEEECCCCCCCCEEEE
Confidence 677777754 357788887765321100 00000111 2222236676665 43 2379999
Q ss_pred EcCCCCCCCCCCCCCccccCCCCceEeec------ccCceeeeeEEEecCC-CcEEEEecC--C-----CeEEEEecCCC
Q 023246 88 EKNMGLGPSPLSLSPEDLQKREEPQVYSG------HRNSQTVKGVNFFGPN-DEYVMSGSD--C-----GHLFIWKKKGG 153 (285)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~-~~~l~~~~~--d-----g~v~vwd~~~~ 153 (285)
|..+. ....+.. .... ..++.+ ..+ ++.++.|+. + ..+.+||+.+.
T Consensus 519 d~~t~-----------------~W~~~~~~g~~p~~r~~--~~a~v~-~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 519 NVTEE-----------------IFKDVTPKDEFFQNSLV--SAGLEF-DPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp ETTTT-----------------EEEECCCSSGGGGSCCB--SCEEEE-ETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred ECCCC-----------------ceEEccCCCCCCCcccc--eeEEEE-eCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 98765 1122211 1111 233443 444 667777765 2 46889998877
Q ss_pred ce-----EEEEec----ccccceEeEEcCCCCeEEEEecC--------CcEEEEcCCCCCC
Q 023246 154 KL-----VRLMVG----DRHVVNQLEPHPHIPMFATCGIE--------KTVKLWAPMPTDF 197 (285)
Q Consensus 154 ~~-----~~~~~~----h~~~v~~~~~~p~~~~l~t~~~d--------~~i~iwd~~~~~~ 197 (285)
+- -..+.. ..... +++...++++++.|+.+ ..+.+||+.+...
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred ccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 61 112211 11111 22233336677777643 3588888876653
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.40 E-value=8.6 Score=36.13 Aligned_cols=37 Identities=11% Similarity=-0.052 Sum_probs=30.9
Q ss_pred eeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEe
Q 023246 123 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMV 160 (285)
Q Consensus 123 i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 160 (285)
+.+++. .++..++++-+.|+++++|++.+++++.+..
T Consensus 240 ~vs~~~-~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIF-LSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEE-ETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeec-cCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 455554 6788899999999999999999999988754
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.01 E-value=27 Score=29.04 Aligned_cols=28 Identities=4% Similarity=0.080 Sum_probs=20.6
Q ss_pred eEEEEcCCCCcEEEEeeCCCcEEEEEcc
Q 023246 7 NAIVIDPRNPNYFAVGGSDEYARVYDIR 34 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg~v~iwd~~ 34 (285)
+.|+|.|++...|+++...|.|++++..
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 5799999863245556778999999754
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.71 E-value=8.7 Score=33.83 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.2
Q ss_pred eeeEEEecCCCcEEEEecCCCeEEEEecCCCceEEEEec
Q 023246 123 VKGVNFFGPNDEYVMSGSDCGHLFIWKKKGGKLVRLMVG 161 (285)
Q Consensus 123 i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 161 (285)
|.++.+ +..++++-+.|+++++|++.+++++.+..-
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 454443 477999999999999999999998877653
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=71.06 E-value=23 Score=30.45 Aligned_cols=57 Identities=16% Similarity=0.232 Sum_probs=40.2
Q ss_pred eeEEEecCCCcEEEEecCC------------CeEEEEecCCCceEEEEecc-cccceEeEEcCCCCeEEEE
Q 023246 124 KGVNFFGPNDEYVMSGSDC------------GHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATC 181 (285)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~d------------g~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~t~ 181 (285)
-.|.| ++.|++++.-..+ ..+.+.+..+++..+.+.++ ...++.++|+|+++.|...
T Consensus 479 DNL~f-d~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEE-CTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEE-CCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 44777 8999877664322 34666677778777666654 3689999999999886544
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.26 E-value=19 Score=30.85 Aligned_cols=82 Identities=9% Similarity=0.014 Sum_probs=49.9
Q ss_pred eEEEEcCCCCcEEEEeeCCCcEEEEEccCCcccCCcCCCCCcccccccccCCCCCcceEEEEEecCCCEEEEe-cCCcEE
Q 023246 7 NAIVIDPRNPNYFAVGGSDEYARVYDIRKCHWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYSNTSELLISY-NDELVY 85 (285)
Q Consensus 7 ~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s~~~~~l~s~-~d~~i~ 85 (285)
..+.++|||..+++.|-.+.++.++|+........-+..++ +....... .-.-.....+|.++|....+- -|.+|.
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~-~~~~~ae~--e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP-RDVIVGEP--ELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG-GGGEEECC--BCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc-ccceEeec--cCCCcccEEEECCCCceEeeeeecceEE
Confidence 46889999866777777899999999985321000000000 00001111 113356678999999555554 499999
Q ss_pred EEEcCC
Q 023246 86 LFEKNM 91 (285)
Q Consensus 86 iwd~~~ 91 (285)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999964
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.25 E-value=78 Score=29.15 Aligned_cols=31 Identities=13% Similarity=0.167 Sum_probs=25.1
Q ss_pred cceEEEEEecCCCEEEE-ecCCcEEEEEcCCC
Q 023246 62 IHITGLAYSNTSELLIS-YNDELVYLFEKNMG 92 (285)
Q Consensus 62 ~~v~~i~~s~~~~~l~s-~~d~~i~iwd~~~~ 92 (285)
..+.+++..++..++++ +.|+++++|++.++
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 35677777777777777 77999999999887
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=66.59 E-value=38 Score=29.07 Aligned_cols=58 Identities=16% Similarity=0.226 Sum_probs=41.0
Q ss_pred eeeEEEecCCCcEEEEecC------------CCeEEEEecCCCceEEEEecc-cccceEeEEcCCCCeEEEE
Q 023246 123 VKGVNFFGPNDEYVMSGSD------------CGHLFIWKKKGGKLVRLMVGD-RHVVNQLEPHPHIPMFATC 181 (285)
Q Consensus 123 i~~~~~~~~~~~~l~~~~~------------dg~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~t~ 181 (285)
...|.| +++|.+.++... ...|+.++..+++....+... ...++.++|+||++.|..+
T Consensus 478 PDnL~f-d~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGF-DKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEE-CTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEE-CCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 566887 888988773321 226777788778776666543 3578999999999986555
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.20 E-value=30 Score=32.58 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=23.4
Q ss_pred ceEEEEEecCCCEEEE-ecCCcEEEEEcCCC
Q 023246 63 HITGLAYSNTSELLIS-YNDELVYLFEKNMG 92 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s-~~d~~i~iwd~~~~ 92 (285)
.+.+++..++..++++ +.|+++++|++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC
Confidence 4455566677777777 67999999999887
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=48.30 E-value=53 Score=28.32 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=14.2
Q ss_pred CcceEEEEEecCCCEEEE
Q 023246 61 NIHITGLAYSNTSELLIS 78 (285)
Q Consensus 61 ~~~v~~i~~s~~~~~l~s 78 (285)
...++.++|+||++.|..
T Consensus 530 gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp TCEEEEEEECTTSSEEEE
T ss_pred CccCcCeeECCCCCEEEE
Confidence 467999999999886554
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=46.56 E-value=1.1e+02 Score=24.55 Aligned_cols=153 Identities=13% Similarity=0.176 Sum_probs=75.1
Q ss_pred cEEEEEccCC--cccCCcCCCCCcccccccccCCCCCcceEEEEEe---cC----CCE-EEE-ecCCcEEEEEcCCCCCC
Q 023246 27 YARVYDIRKC--HWYSPISSDTPVDTFCPRHLIGKNNIHITGLAYS---NT----SEL-LIS-YNDELVYLFEKNMGLGP 95 (285)
Q Consensus 27 ~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~s---~~----~~~-l~s-~~d~~i~iwd~~~~~~~ 95 (285)
+|.+||+.++ ++++.+..+..+ ......+..+.+. |. +.+ .++ .....|.|+|+.++..-
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~---------~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRL---------VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW 194 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGG---------CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEECCCCCceeEEEEECCHHh---------cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE
Confidence 5778888888 665444332211 1124567888888 22 223 333 34788999999877310
Q ss_pred CCCCCCCccccCCCCceEe--ecccC--ceeeeeEEEecCC----CcEEEEecCCC-eEEEEe---cCCCc---eEEEEe
Q 023246 96 SPLSLSPEDLQKREEPQVY--SGHRN--SQTVKGVNFFGPN----DEYVMSGSDCG-HLFIWK---KKGGK---LVRLMV 160 (285)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~--~~~~~--~~~i~~~~~~~~~----~~~l~~~~~dg-~v~vwd---~~~~~---~~~~~~ 160 (285)
... ...... .....+ .+..- ...+..++. +|+ ++.|.-....+ .++--. ++... .+..+
T Consensus 195 Rv~---~~~~~p-d~~~~~~i~G~~~~~~~Gi~gIaL-sp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~- 268 (381)
T 3q6k_A 195 NVT---HPTFKA-ERPTKFDYGGKEYEFKAGIFGITL-GDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL- 268 (381)
T ss_dssp EEE---CGGGSC-CSCEEEEETTEEEEECCCEEEEEE-CCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-
T ss_pred EEc---cCCCcc-ccCcceEECCEEeEeccCceEEEe-cCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-
Confidence 000 000000 000011 11100 012677775 776 55554443322 333332 22221 11111
Q ss_pred cccc---cceEeEEc-CCCCeEEEEecCCcEEEEcCCC
Q 023246 161 GDRH---VVNQLEPH-PHIPMFATCGIEKTVKLWAPMP 194 (285)
Q Consensus 161 ~h~~---~v~~~~~~-p~~~~l~t~~~d~~i~iwd~~~ 194 (285)
+..+ .-..++++ .+|..+++--....|..|+..+
T Consensus 269 G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 269 GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 2222 23345675 5777777777888999999875
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=45.67 E-value=1.2e+02 Score=26.04 Aligned_cols=61 Identities=20% Similarity=0.370 Sum_probs=37.1
Q ss_pred cceEEEEEecCCCEEE-E-ec-----------CCcEEEEEcCCCCCCCCCCCCCccccCCCCceEeecccCceeeeeEEE
Q 023246 62 IHITGLAYSNTSELLI-S-YN-----------DELVYLFEKNMGLGPSPLSLSPEDLQKREEPQVYSGHRNSQTVKGVNF 128 (285)
Q Consensus 62 ~~v~~i~~s~~~~~l~-s-~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 128 (285)
.....|.|.++|.+.+ + .. ...|..++..++ +....+.... ...++.++|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG----------------el~~fl~~P~-~aEpnGiaf 538 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG----------------EIRRFMVGPI-GCEVTGISF 538 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC----------------CEEEEEECCT-TCEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCC----------------eEEEEEeCCC-CccccCCEE
Confidence 4577899999998766 4 21 114555555444 3333333222 133899997
Q ss_pred ecCCCcEEEEec
Q 023246 129 FGPNDEYVMSGS 140 (285)
Q Consensus 129 ~~~~~~~l~~~~ 140 (285)
+|+++.|+..-
T Consensus 539 -SPD~ktLfV~v 549 (592)
T 4a9v_A 539 -SPDQKTLFVGI 549 (592)
T ss_dssp -CTTSSEEEEEE
T ss_pred -CCCCCEEEEEE
Confidence 99998877653
No 363
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=32.65 E-value=1.8e+02 Score=22.96 Aligned_cols=24 Identities=25% Similarity=0.464 Sum_probs=15.0
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCC
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDE 26 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg 26 (285)
...|.+|+++|.++..+..++..|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCceEEEEECCCCCCeEEEEecCC
Confidence 356899999984334555555544
No 364
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=32.63 E-value=1.5e+02 Score=24.86 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=36.4
Q ss_pred EEEEecCCCeEEEEecC-CCc-------eEEEEec--ccccceEeEEcCCCCeEEEEecCCcEEE
Q 023246 135 YVMSGSDCGHLFIWKKK-GGK-------LVRLMVG--DRHVVNQLEPHPHIPMFATCGIEKTVKL 189 (285)
Q Consensus 135 ~l~~~~~dg~v~vwd~~-~~~-------~~~~~~~--h~~~v~~~~~~p~~~~l~t~~~d~~i~i 189 (285)
.+..|+.+|.|.-.-+. .+. .+..+.. ...+|..|.++++..+|..++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46678889987644332 211 2233332 3578999999999999999988876665
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.57 E-value=2.8e+02 Score=24.68 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=20.4
Q ss_pred ceEEEEEecCCCEEEE-ecCCcEEEEEcCCC
Q 023246 63 HITGLAYSNTSELLIS-YNDELVYLFEKNMG 92 (285)
Q Consensus 63 ~v~~i~~s~~~~~l~s-~~d~~i~iwd~~~~ 92 (285)
.|.++.+ +..++++ +.|.++++|++.++
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCC
Confidence 3555444 3556666 78999999999987
No 366
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=27.69 E-value=2.7e+02 Score=24.50 Aligned_cols=55 Identities=13% Similarity=0.212 Sum_probs=35.6
Q ss_pred EEEEecCCCeEE-EEecCCCc-------eEEEEe--cccccceEeEEcCCCCeEEEEecCCcEEE
Q 023246 135 YVMSGSDCGHLF-IWKKKGGK-------LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKL 189 (285)
Q Consensus 135 ~l~~~~~dg~v~-vwd~~~~~-------~~~~~~--~h~~~v~~~~~~p~~~~l~t~~~d~~i~i 189 (285)
.++.|+.+|.|. +.-..... .+..+. ....+|..|.++++..+|..++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788899876 33222111 222222 34568999999999999999888776655
No 367
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.85 E-value=3e+02 Score=23.78 Aligned_cols=56 Identities=5% Similarity=0.018 Sum_probs=36.0
Q ss_pred cEEEEecCCCeEEEEecCC-C----c-eEEEEe--cccccceEeEEcCCCCeEEEEecCCcEEE
Q 023246 134 EYVMSGSDCGHLFIWKKKG-G----K-LVRLMV--GDRHVVNQLEPHPHIPMFATCGIEKTVKL 189 (285)
Q Consensus 134 ~~l~~~~~dg~v~vwd~~~-~----~-~~~~~~--~h~~~v~~~~~~p~~~~l~t~~~d~~i~i 189 (285)
..+..|+.+|.|.-.-+.. + . .+..+. ....+|..|.++++...|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 3567788899877443322 2 1 122332 24568999999999888888877665555
No 368
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=24.21 E-value=67 Score=22.75 Aligned_cols=36 Identities=8% Similarity=0.070 Sum_probs=27.7
Q ss_pred ccceeEEEEcCCCCcEEEEeeCCCcEEEEEccCCcc
Q 023246 3 SIRLNAIVIDPRNPNYFAVGGSDEYARVYDIRKCHW 38 (285)
Q Consensus 3 ~~~v~~~~~s~~~~~~l~tg~~dg~v~iwd~~~~~~ 38 (285)
++-+.++.|...+..-+++.+.+|++.++|..-|+.
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 345667778775556788888999999999987763
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.00 E-value=1.8e+02 Score=24.73 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=41.1
Q ss_pred eeeEEEe-cCCCcEEEEecCCCeEEEEecCCCc----eEEEEe--cccccce-EeEEcCCCCeEEEEecCCcEEE
Q 023246 123 VKGVNFF-GPNDEYVMSGSDCGHLFIWKKKGGK----LVRLMV--GDRHVVN-QLEPHPHIPMFATCGIEKTVKL 189 (285)
Q Consensus 123 i~~~~~~-~~~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~--~h~~~v~-~~~~~p~~~~l~t~~~d~~i~i 189 (285)
+++++.. ..+-..++.|+.+|.|.-..+.... .+..+. ....+|. .|.+++++.+|..++..+.+++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4555431 1233456778899988765554221 233332 2246785 8999999999988887765555
Done!