Query 023250
Match_columns 285
No_of_seqs 222 out of 943
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 03:39:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyx_A ORF K3, K3RING; zinc-bi 99.8 3.3E-19 1.1E-23 130.3 3.8 56 197-254 4-59 (60)
2 2d8s_A Cellular modulator of i 99.7 1.7E-18 5.8E-23 132.9 4.4 61 194-254 10-70 (80)
3 2kiz_A E3 ubiquitin-protein li 98.7 1.8E-08 6.1E-13 72.4 5.1 55 193-254 8-63 (69)
4 1x4j_A Ring finger protein 38; 98.7 1.1E-08 3.9E-13 74.8 3.9 52 195-253 19-71 (75)
5 2ep4_A Ring finger protein 24; 98.7 2.3E-08 8E-13 72.7 4.9 52 197-255 13-65 (74)
6 2l0b_A E3 ubiquitin-protein li 98.6 3.7E-08 1.3E-12 75.3 4.2 51 196-253 37-88 (91)
7 2ect_A Ring finger protein 126 98.5 2.6E-08 8.8E-13 73.1 2.4 55 193-254 9-64 (78)
8 1iym_A EL5; ring-H2 finger, ub 98.5 3.4E-08 1.2E-12 67.8 2.0 50 197-253 3-54 (55)
9 1v87_A Deltex protein 2; ring- 98.5 1.2E-07 4.2E-12 74.1 4.6 51 199-254 25-94 (114)
10 2ecm_A Ring finger and CHY zin 98.5 9.1E-08 3.1E-12 65.5 3.3 50 197-253 3-54 (55)
11 2ecl_A Ring-box protein 2; RNF 98.4 9.2E-08 3.1E-12 71.9 3.3 50 198-254 14-76 (81)
12 2ct2_A Tripartite motif protei 98.4 2.1E-07 7.3E-12 69.0 5.2 55 195-254 11-68 (88)
13 2ea6_A Ring finger protein 4; 98.3 1.7E-07 5.8E-12 66.4 2.1 51 196-253 12-67 (69)
14 3dpl_R Ring-box protein 1; ubi 98.3 4E-07 1.4E-11 72.8 4.4 49 199-254 37-101 (106)
15 2csy_A Zinc finger protein 183 98.3 8.3E-07 2.8E-11 65.7 5.1 51 194-253 10-60 (81)
16 2yur_A Retinoblastoma-binding 98.3 4.4E-07 1.5E-11 66.6 3.5 51 196-253 12-63 (74)
17 2d8t_A Dactylidin, ring finger 98.2 4.6E-07 1.6E-11 65.7 2.9 50 196-254 12-61 (71)
18 1chc_A Equine herpes virus-1 r 98.2 7.2E-07 2.5E-11 63.6 3.8 50 197-254 3-52 (68)
19 2ysl_A Tripartite motif-contai 98.2 1E-06 3.5E-11 63.4 3.8 52 196-254 17-69 (73)
20 2ecn_A Ring finger protein 141 98.2 2.8E-07 9.5E-12 66.2 0.2 48 197-254 13-60 (70)
21 2ecw_A Tripartite motif-contai 98.1 1.8E-06 6.3E-11 63.0 4.4 52 196-254 16-71 (85)
22 3ng2_A RNF4, snurf, ring finge 98.1 1.4E-06 4.7E-11 62.3 3.2 52 196-254 7-63 (71)
23 3ztg_A E3 ubiquitin-protein li 98.1 2.8E-06 9.4E-11 64.0 4.7 53 194-253 8-61 (92)
24 2ecy_A TNF receptor-associated 98.1 1.7E-06 5.9E-11 61.6 3.1 51 196-254 12-62 (66)
25 2ct0_A Non-SMC element 1 homol 98.1 2.1E-06 7.1E-11 65.2 3.4 53 196-254 12-64 (74)
26 2ecv_A Tripartite motif-contai 98.1 2.9E-06 9.8E-11 62.0 3.9 52 196-254 16-71 (85)
27 2djb_A Polycomb group ring fin 98.0 2.6E-06 8.9E-11 61.8 3.5 49 197-254 13-62 (72)
28 2xeu_A Ring finger protein 4; 98.0 2.6E-06 8.7E-11 59.4 3.0 50 198-254 2-56 (64)
29 2ysj_A Tripartite motif-contai 98.0 4.9E-06 1.7E-10 58.6 4.4 47 195-248 16-63 (63)
30 2ecj_A Tripartite motif-contai 98.0 4.3E-06 1.5E-10 57.5 3.5 46 196-248 12-58 (58)
31 1t1h_A Gspef-atpub14, armadill 98.0 4.8E-06 1.6E-10 60.9 3.9 51 196-254 5-55 (78)
32 4a0k_B E3 ubiquitin-protein li 98.0 1.2E-06 4.1E-11 71.6 0.5 49 199-254 48-112 (117)
33 1e4u_A Transcriptional repress 97.9 9.5E-06 3.2E-10 61.3 4.1 57 197-257 9-65 (78)
34 4ayc_A E3 ubiquitin-protein li 97.9 2E-06 7E-11 70.1 0.2 50 198-256 52-101 (138)
35 2egp_A Tripartite motif-contai 97.8 2.8E-06 9.6E-11 61.8 0.6 52 196-254 9-65 (79)
36 3lrq_A E3 ubiquitin-protein li 97.8 1.5E-05 5.1E-10 61.7 4.2 53 197-257 20-73 (100)
37 1g25_A CDK-activating kinase a 97.7 1.2E-05 4E-10 57.1 2.2 51 198-254 2-55 (65)
38 3fl2_A E3 ubiquitin-protein li 97.7 2.1E-05 7.3E-10 62.5 3.5 50 197-254 50-99 (124)
39 4ap4_A E3 ubiquitin ligase RNF 97.7 1.4E-05 4.9E-10 62.5 2.0 58 197-261 5-67 (133)
40 2ckl_B Ubiquitin ligase protei 97.6 2.6E-05 8.9E-10 64.9 3.4 48 198-253 53-101 (165)
41 2y43_A E3 ubiquitin-protein li 97.6 2.8E-05 9.6E-10 59.4 3.1 49 197-254 20-69 (99)
42 1jm7_A BRCA1, breast cancer ty 97.6 2.7E-05 9.4E-10 60.0 2.6 50 198-254 20-70 (112)
43 3k1l_B Fancl; UBC, ring, RWD, 97.6 2.8E-05 9.7E-10 74.8 3.1 63 195-260 304-379 (381)
44 2ckl_A Polycomb group ring fin 97.6 2.8E-05 9.7E-10 60.4 2.5 49 197-254 13-62 (108)
45 1z6u_A NP95-like ring finger p 97.5 5.5E-05 1.9E-09 63.1 3.4 50 198-255 77-126 (150)
46 1rmd_A RAG1; V(D)J recombinati 97.4 3.9E-05 1.3E-09 60.2 1.9 50 197-254 21-70 (116)
47 3hct_A TNF receptor-associated 97.4 9.8E-05 3.3E-09 58.4 3.5 51 196-254 15-65 (118)
48 4ap4_A E3 ubiquitin ligase RNF 97.4 6.9E-05 2.4E-09 58.6 2.6 51 197-254 70-125 (133)
49 3l11_A E3 ubiquitin-protein li 97.3 2.2E-05 7.6E-10 61.5 -1.2 50 197-254 13-62 (115)
50 2y1n_A E3 ubiquitin-protein li 97.3 0.00016 5.3E-09 69.9 4.4 51 197-255 330-380 (389)
51 2vje_B MDM4 protein; proto-onc 97.2 0.00014 4.7E-09 52.3 2.1 50 196-254 4-56 (63)
52 2kr4_A Ubiquitin conjugation f 97.1 0.00056 1.9E-08 51.8 4.8 50 196-254 11-60 (85)
53 2kre_A Ubiquitin conjugation f 97.0 0.0011 3.8E-08 51.9 5.9 50 196-254 26-75 (100)
54 1bor_A Transcription factor PM 96.9 0.00011 3.8E-09 51.3 -0.5 46 197-254 4-49 (56)
55 4ic3_A E3 ubiquitin-protein li 96.8 0.00015 5.1E-09 53.3 -0.6 45 197-254 22-67 (74)
56 1jm7_B BARD1, BRCA1-associated 96.7 0.00017 5.9E-09 56.9 -0.8 46 197-253 20-66 (117)
57 2c2l_A CHIP, carboxy terminus 96.7 0.0011 3.9E-08 57.6 4.2 50 197-254 206-255 (281)
58 2vje_A E3 ubiquitin-protein li 96.7 0.00062 2.1E-08 49.0 1.9 48 198-254 7-57 (64)
59 1wgm_A Ubiquitin conjugation f 96.7 0.0023 7.8E-08 49.9 5.2 51 196-254 19-69 (98)
60 3knv_A TNF receptor-associated 96.5 0.0004 1.4E-08 57.4 0.1 51 195-253 27-77 (141)
61 3nw0_A Non-structural maintena 96.4 0.0017 6E-08 58.3 3.6 56 198-260 179-235 (238)
62 2ea5_A Cell growth regulator w 96.3 0.0019 6.6E-08 47.1 2.6 49 193-254 9-58 (68)
63 3hcs_A TNF receptor-associated 96.3 0.0023 7.7E-08 53.2 3.2 51 196-254 15-65 (170)
64 2ecg_A Baculoviral IAP repeat- 96.1 0.0024 8.3E-08 46.7 2.4 45 197-254 23-68 (75)
65 2yu4_A E3 SUMO-protein ligase 96.1 0.0045 1.5E-07 47.4 4.0 48 197-251 5-59 (94)
66 2f42_A STIP1 homology and U-bo 95.9 0.0047 1.6E-07 53.7 3.5 50 197-254 104-153 (179)
67 1wim_A KIAA0161 protein; ring 95.7 0.0059 2E-07 46.2 2.8 51 198-253 4-63 (94)
68 3htk_C E3 SUMO-protein ligase 95.2 0.016 5.3E-07 53.7 4.5 51 197-254 179-232 (267)
69 3t6p_A Baculoviral IAP repeat- 94.8 0.0046 1.6E-07 58.4 -0.2 45 197-254 293-338 (345)
70 2lri_C Autoimmune regulator; Z 94.2 0.017 5.8E-07 42.6 1.8 57 193-256 6-64 (66)
71 2yho_A E3 ubiquitin-protein li 93.4 0.023 7.7E-07 42.4 1.2 46 197-255 16-62 (79)
72 2bay_A PRE-mRNA splicing facto 93.3 0.047 1.6E-06 39.1 2.7 46 200-254 4-50 (61)
73 2l43_A N-teminal domain from h 85.3 0.15 5E-06 39.3 -0.3 53 196-252 22-76 (88)
74 1weo_A Cellulose synthase, cat 85.0 0.77 2.6E-05 36.5 3.7 51 198-254 15-70 (93)
75 1weu_A Inhibitor of growth fam 84.1 0.2 7E-06 39.2 0.0 53 193-252 30-86 (91)
76 1wen_A Inhibitor of growth fam 83.2 0.32 1.1E-05 36.1 0.8 52 193-251 10-65 (71)
77 1wev_A Riken cDNA 1110020M19; 83.1 0.049 1.7E-06 41.9 -3.9 55 196-253 13-74 (88)
78 3u5n_A E3 ubiquitin-protein li 79.5 0.19 6.6E-06 43.5 -1.9 50 196-252 4-55 (207)
79 2ku3_A Bromodomain-containing 78.9 0.29 1E-05 36.4 -0.7 51 197-251 14-66 (71)
80 2k16_A Transcription initiatio 77.1 0.45 1.5E-05 34.9 -0.2 53 196-252 15-69 (75)
81 1f62_A Transcription factor WS 73.5 0.92 3.2E-05 30.8 0.7 47 200-250 1-49 (51)
82 2l5u_A Chromodomain-helicase-D 72.7 0.92 3.2E-05 32.4 0.5 49 196-251 8-58 (61)
83 3o36_A Transcription intermedi 71.9 0.47 1.6E-05 40.2 -1.4 48 198-252 3-52 (184)
84 2jmi_A Protein YNG1, ING1 homo 71.6 0.28 9.5E-06 38.4 -2.6 51 193-250 20-75 (90)
85 2ri7_A Nucleosome-remodeling f 70.8 0.77 2.6E-05 38.2 -0.3 52 197-252 6-60 (174)
86 1wep_A PHF8; structural genomi 70.0 2.3 7.8E-05 31.6 2.2 54 195-252 8-64 (79)
87 2ysm_A Myeloid/lymphoid or mix 69.6 0.73 2.5E-05 36.0 -0.7 38 197-238 5-42 (111)
88 2e6r_A Jumonji/ARID domain-con 68.9 0.27 9.1E-06 38.1 -3.3 53 194-251 11-66 (92)
89 2vnf_A ING 4, P29ING4, inhibit 68.7 0.29 1E-05 35.0 -2.9 48 196-250 7-58 (60)
90 2lbm_A Transcriptional regulat 68.6 3.1 0.00011 34.9 3.0 47 197-250 61-116 (142)
91 3ql9_A Transcriptional regulat 67.6 4.3 0.00015 33.6 3.6 49 196-251 54-111 (129)
92 2ko5_A Ring finger protein Z; 62.6 2.6 9E-05 33.8 1.3 45 199-253 28-72 (99)
93 2yt5_A Metal-response element- 62.1 0.59 2E-05 33.3 -2.3 52 196-251 3-61 (66)
94 1wil_A KIAA1045 protein; ring 61.1 4.9 0.00017 31.6 2.6 50 197-252 13-77 (89)
95 1mm2_A MI2-beta; PHD, zinc fin 60.7 0.75 2.6E-05 32.9 -2.0 49 196-251 6-56 (61)
96 3v43_A Histone acetyltransfera 58.5 4.8 0.00016 31.6 2.1 35 198-235 4-43 (112)
97 4gne_A Histone-lysine N-methyl 57.9 1.9 6.5E-05 34.5 -0.3 46 193-248 9-59 (107)
98 2lv9_A Histone-lysine N-methyl 57.7 2.2 7.4E-05 33.2 0.0 50 197-251 26-76 (98)
99 3vk6_A E3 ubiquitin-protein li 57.2 8 0.00027 31.0 3.2 36 216-257 17-52 (101)
100 1fp0_A KAP-1 corepressor; PHD 50.6 3.2 0.00011 32.3 -0.1 49 196-251 22-72 (88)
101 1x4i_A Inhibitor of growth pro 49.2 2.4 8.1E-05 31.3 -1.0 50 196-252 3-56 (70)
102 2xb1_A Pygopus homolog 2, B-ce 48.4 4.3 0.00015 32.0 0.3 51 200-253 4-63 (105)
103 2kwj_A Zinc finger protein DPF 47.9 3.7 0.00013 32.4 -0.1 35 200-237 2-42 (114)
104 3v43_A Histone acetyltransfera 46.3 2.8 9.5E-05 33.0 -1.1 47 201-250 63-111 (112)
105 1wem_A Death associated transc 45.8 15 0.00052 26.7 3.0 55 193-252 10-71 (76)
106 2vpb_A Hpygo1, pygopus homolog 45.5 9 0.00031 27.7 1.7 34 196-233 5-40 (65)
107 2g6q_A Inhibitor of growth pro 44.0 0.89 3.1E-05 32.8 -3.9 48 196-250 8-59 (62)
108 1wew_A DNA-binding family prot 43.1 22 0.00075 26.1 3.5 53 193-251 10-72 (78)
109 2yql_A PHD finger protein 21A; 42.5 1.4 4.7E-05 30.7 -3.0 48 196-250 6-55 (56)
110 3asl_A E3 ubiquitin-protein li 40.7 2.3 7.9E-05 31.2 -2.2 46 201-251 20-69 (70)
111 1xwh_A Autoimmune regulator; P 40.6 2.4 8E-05 30.5 -2.1 48 196-250 5-54 (66)
112 1we9_A PHD finger family prote 38.2 10 0.00035 26.6 1.0 53 196-251 3-58 (64)
113 3c6w_A P28ING5, inhibitor of g 37.3 1.3 4.4E-05 31.7 -4.0 47 197-250 7-57 (59)
114 2e6s_A E3 ubiquitin-protein li 36.4 4 0.00014 30.6 -1.5 45 201-250 28-76 (77)
115 3ask_A E3 ubiquitin-protein li 35.5 6.6 0.00023 35.3 -0.5 49 199-251 174-225 (226)
116 2puy_A PHD finger protein 21A; 34.2 2.9 9.9E-05 29.4 -2.5 48 197-251 3-52 (60)
117 3kv5_D JMJC domain-containing 33.8 5.6 0.00019 39.1 -1.3 52 197-252 35-89 (488)
118 2ro1_A Transcription intermedi 31.5 5.8 0.0002 34.0 -1.5 47 199-252 2-50 (189)
119 1wee_A PHD finger family prote 29.4 14 0.00047 26.7 0.4 52 196-251 13-66 (72)
120 3i2d_A E3 SUMO-protein ligase 28.3 76 0.0026 30.4 5.5 40 212-254 256-300 (371)
121 3shb_A E3 ubiquitin-protein li 27.3 4.6 0.00016 30.4 -2.5 46 201-250 28-76 (77)
122 2kgg_A Histone demethylase jar 27.3 11 0.00036 25.8 -0.5 46 201-249 4-52 (52)
123 3kqi_A GRC5, PHD finger protei 24.9 33 0.0011 24.9 1.9 51 197-251 8-61 (75)
124 3o70_A PHD finger protein 13; 21.4 27 0.00094 25.3 0.8 53 192-249 12-65 (68)
125 2rsd_A E3 SUMO-protein ligase 21.2 24 0.00082 25.3 0.4 49 196-250 7-64 (68)
No 1
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=99.75 E-value=3.3e-19 Score=130.26 Aligned_cols=56 Identities=34% Similarity=0.789 Sum_probs=50.4
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++.+||||+++. +++|++||+|+|+++|||+.||.+|+..+++.+||+|+++|.+
T Consensus 4 ~~~~~CrIC~~~~--~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEEL--GNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEEC--SCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCC--CCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 5678999999864 3468999999999999999999999999889999999999974
No 2
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=1.7e-18 Score=132.86 Aligned_cols=61 Identities=28% Similarity=0.719 Sum_probs=54.6
Q ss_pred cccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 194 EIAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 194 e~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+.++++..|+||++++++++.+++||+|+|++|+||..||.+||..+++.+||+|++.|.+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 10 ITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp CCCTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 3445678999999988777889999999999999999999999999888899999999975
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.69 E-value=1.8e-08 Score=72.39 Aligned_cols=55 Identities=33% Similarity=0.819 Sum_probs=43.3
Q ss_pred ccccCCCCeeeEeccCCCCC-CeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 193 EEIAEEEAVCRICLDICEEG-NTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g-~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++..++...|.||++....+ ....+||. |.||..||.+|+... ..|++|+..+..
T Consensus 8 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 8 GTEEDTEEKCTICLSILEEGEDVRRLPCM-----HLFHQVCVDQWLITN--KKCPICRVDIEA 63 (69)
T ss_dssp CCSTTCCCSBTTTTBCCCSSSCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCSBSCS
T ss_pred cCcCCCCCCCeeCCccccCCCcEEEeCCC-----CHHHHHHHHHHHHcC--CCCcCcCccccC
Confidence 33445678899999887544 44578986 789999999999874 479999999764
No 4
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=1.1e-08 Score=74.83 Aligned_cols=52 Identities=19% Similarity=0.635 Sum_probs=42.1
Q ss_pred ccCCCCeeeEeccCCCCCCe-eecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 195 IAEEEAVCRICLDICEEGNT-LKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~~-Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
..++...|.||++.+..++. ..+||. |.||..||.+|+..+ ..|++|++.+.
T Consensus 19 ~~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~fh~~Ci~~w~~~~--~~CP~Cr~~~~ 71 (75)
T 1x4j_A 19 HQSEQTLCVVCMCDFESRQLLRVLPCN-----HEFHAKCVDKWLKAN--RTCPICRADSG 71 (75)
T ss_dssp CSSSCCEETTTTEECCBTCEEEEETTT-----EEEETTHHHHHHHHC--SSCTTTCCCCC
T ss_pred ccCCCCCCeECCcccCCCCeEEEECCC-----CHhHHHHHHHHHHcC--CcCcCcCCcCC
Confidence 34567899999998765554 468886 789999999999874 58999998875
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=2.3e-08 Score=72.67 Aligned_cols=52 Identities=25% Similarity=0.685 Sum_probs=41.3
Q ss_pred CCCCeeeEeccCCCCCCe-eecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecc
Q 023250 197 EEEAVCRICLDICEEGNT-LKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNL 255 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~-Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~v 255 (285)
+++..|.||++.+..+.. .++||. |.||..||.+|+..+ ..|++|+..+..+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~-----H~f~~~Ci~~~~~~~--~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCK-----HAFHRKCLIKWLEVR--KVCPLCNMPVLQL 65 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTT-----EEEEHHHHHHHHHHC--SBCTTTCCBCSSC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCC-----CEecHHHHHHHHHcC--CcCCCcCcccccc
Confidence 456789999998765443 356886 789999999999875 4899999988643
No 6
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.57 E-value=3.7e-08 Score=75.29 Aligned_cols=51 Identities=24% Similarity=0.647 Sum_probs=41.5
Q ss_pred cCCCCeeeEeccCCCCCCe-eecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 196 AEEEAVCRICLDICEEGNT-LKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~-Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
.+++..|.||++.+..++. ..+||. |.||..||.+|+.. +..|++|+..+.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~Fh~~Ci~~wl~~--~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCH-----HYFHKPCVSIWLQK--SGTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTT-----EEEEHHHHHHHHTT--TCBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCC-----ChHHHHHHHHHHHc--CCcCcCcCccCC
Confidence 3567899999998866554 468986 78999999999976 459999999864
No 7
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.54 E-value=2.6e-08 Score=73.12 Aligned_cols=55 Identities=25% Similarity=0.713 Sum_probs=43.1
Q ss_pred ccccCCCCeeeEeccCCCCCCe-eecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 193 EEIAEEEAVCRICLDICEEGNT-LKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~-Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++..++...|.||++.+..... .++||. |.||..||.+|+..+ ..|++|+..+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 64 (78)
T 2ect_A 9 EEHVGSGLECPVCKEDYALGESVRQLPCN-----HLFHDSCIVPWLEQH--DSCPVCRKSLTG 64 (78)
T ss_dssp CTTSSSSCCCTTTTSCCCTTSCEEECTTS-----CEEETTTTHHHHTTT--CSCTTTCCCCCC
T ss_pred cccCCCCCCCeeCCccccCCCCEEEeCCC-----CeecHHHHHHHHHcC--CcCcCcCCccCC
Confidence 3344567899999998765443 467886 789999999999764 689999999764
No 8
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.50 E-value=3.4e-08 Score=67.80 Aligned_cols=50 Identities=26% Similarity=0.705 Sum_probs=39.5
Q ss_pred CCCCeeeEeccCCCCCC-eeecc-cccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 197 EEEAVCRICLDICEEGN-TLKME-CSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 197 ee~~~CRICle~~e~g~-~Li~P-C~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
+++..|.||++....++ ...+| |. |.+|..||.+|+.. +..|++|+..+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~-----H~f~~~Ci~~w~~~--~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCG-----HGFHAECVDMWLGS--HSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSC-----CEECTTHHHHTTTT--CCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCC-----CcccHHHHHHHHHc--CCcCcCCCCEeE
Confidence 45678999999876544 34566 75 78999999999976 468999998864
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.46 E-value=1.2e-07 Score=74.10 Aligned_cols=51 Identities=22% Similarity=0.504 Sum_probs=39.2
Q ss_pred CCeeeEeccCCCCCC---------------e-eecccccCCCcceecHHHHHHHHHh---cCCCcccCCCcceec
Q 023250 199 EAVCRICLDICEEGN---------------T-LKMECSCKGALRLVHEECAIRWFST---KGNKNCEVCGKEVQN 254 (285)
Q Consensus 199 ~~~CRICle~~e~g~---------------~-Li~PC~CkGSl~~VH~~CL~kWl~~---kg~~~CEICK~ey~~ 254 (285)
+..|-||++.+.... . .+++|. |.||..||.+|+.. +....|++|+..|..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~-----H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCS-----HAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSC-----CEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCC-----CcccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 358999998864321 1 167887 79999999999965 346799999999874
No 10
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.46 E-value=9.1e-08 Score=65.49 Aligned_cols=50 Identities=20% Similarity=0.502 Sum_probs=40.2
Q ss_pred CCCCeeeEeccCCCCC--CeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 197 EEEAVCRICLDICEEG--NTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 197 ee~~~CRICle~~e~g--~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
.....|.||++....+ ...++||. |.||..||.+|+... ..|++|+..+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCG-----HLLHRTCYEEMLKEG--YRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTS-----CEEETTHHHHHHHHT--CCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCC-----CcccHHHHHHHHHcC--CcCCCCCCcCC
Confidence 3567899999987432 35678986 789999999999885 78999998864
No 11
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=9.2e-08 Score=71.91 Aligned_cols=50 Identities=20% Similarity=0.529 Sum_probs=36.8
Q ss_pred CCCeeeEeccCCCC-----------CC-eeecc-cccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 198 EEAVCRICLDICEE-----------GN-TLKME-CSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle~~e~-----------g~-~Li~P-C~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++..|.||++.+++ ++ ...+| |. |.||..||.+|+..+ .+||+|+..|..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~~--~~CP~CR~~~~~ 76 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECN-----HSFHNCCMSLWVKQN--NRCPLCQQDWVV 76 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTS-----CEEEHHHHHHHTTTC--CBCTTTCCBCCE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCC-----CccChHHHHHHHHhC--CCCCCcCCCcch
Confidence 44568888776632 23 33454 76 789999999999874 599999999764
No 12
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=2.1e-07 Score=68.97 Aligned_cols=55 Identities=18% Similarity=0.483 Sum_probs=44.1
Q ss_pred ccCCCCeeeEeccCCCCCC--eeecccccCCCcceecHHHHHHHHHhc-CCCcccCCCcceec
Q 023250 195 IAEEEAVCRICLDICEEGN--TLKMECSCKGALRLVHEECAIRWFSTK-GNKNCEVCGKEVQN 254 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~--~Li~PC~CkGSl~~VH~~CL~kWl~~k-g~~~CEICK~ey~~ 254 (285)
..++...|.||++.+..++ +..+||. |.||..|+.+|+..+ +...|++|+..+..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCG-----HTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSS-----CEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hccCCCCCccCCccccccCCCeEECCCC-----ChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 3456678999999876543 6678886 789999999999875 35799999998764
No 13
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=1.7e-07 Score=66.39 Aligned_cols=51 Identities=24% Similarity=0.621 Sum_probs=40.1
Q ss_pred cCCCCeeeEeccCCCC----CC-eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 196 AEEEAVCRICLDICEE----GN-TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 196 ~ee~~~CRICle~~e~----g~-~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
.++...|.||++.+.+ +. ...++|. |.||..||.+|+.. ...|++|+..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKIN 67 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSS-----CEEEHHHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCC-----ChhcHHHHHHHHHc--CCCCCCCCCccC
Confidence 3567889999987642 12 2568886 78999999999987 468999999875
No 14
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.31 E-value=4e-07 Score=72.80 Aligned_cols=49 Identities=22% Similarity=0.437 Sum_probs=37.5
Q ss_pred CCeeeEeccCCCCC----------------CeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 199 EAVCRICLDICEEG----------------NTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 199 ~~~CRICle~~e~g----------------~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
...|-||++.+++. ....++|. |.||..||.+||.. +.+|++|+.+|.+
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~--~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEF 101 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTS-----CEEEHHHHHHHHTT--CSBCSSSCSBCCE
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccC-----cEECHHHHHHHHHc--CCcCcCCCCccee
Confidence 45699998776422 12357887 79999999999976 5689999999753
No 15
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=8.3e-07 Score=65.70 Aligned_cols=51 Identities=25% Similarity=0.563 Sum_probs=41.9
Q ss_pred cccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 194 EIAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 194 e~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
+..++...|.||++... ++.++||. |.||..||.+|+.. ...|++|+..+.
T Consensus 10 ~~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 60 (81)
T 2csy_A 10 EEEEIPFRCFICRQAFQ--NPVVTKCR-----HYFCESCALEHFRA--TPRCYICDQPTG 60 (81)
T ss_dssp SCCCCCSBCSSSCSBCC--SEEECTTS-----CEEEHHHHHHHHHH--CSBCSSSCCBCC
T ss_pred ccCCCCCCCcCCCchhc--CeeEccCC-----CHhHHHHHHHHHHC--CCcCCCcCcccc
Confidence 34456789999998764 47788987 78999999999976 568999999986
No 16
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.28 E-value=4.4e-07 Score=66.56 Aligned_cols=51 Identities=22% Similarity=0.527 Sum_probs=42.1
Q ss_pred cCCCCeeeEeccCCCCCCeeecc-cccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 196 AEEEAVCRICLDICEEGNTLKME-CSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~P-C~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
.+++..|.||++.+. ++..+| |. |.||..||.+|+..++...|++|+..+.
T Consensus 12 ~~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 12 IPDELLCLICKDIMT--DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp SCGGGSCSSSCCCCT--TCEECSSSC-----CEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCCcCCChHHh--CCeEcCCCC-----CHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 356678999998765 467788 86 7899999999999876679999999754
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=4.6e-07 Score=65.71 Aligned_cols=50 Identities=22% Similarity=0.537 Sum_probs=40.7
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
..+...|.||++... ++..+||. |.||..||.+|+... ..|++|+..+..
T Consensus 12 ~~~~~~C~IC~~~~~--~~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 12 SLTVPECAICLQTCV--HPVSLPCK-----HVFCYLCVKGASWLG--KRCALCRQEIPE 61 (71)
T ss_dssp SSSCCBCSSSSSBCS--SEEEETTT-----EEEEHHHHHHCTTCS--SBCSSSCCBCCH
T ss_pred CCCCCCCccCCcccC--CCEEccCC-----CHHHHHHHHHHHHCC--CcCcCcCchhCH
Confidence 356678999998764 46778886 789999999999763 799999999763
No 18
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.24 E-value=7.2e-07 Score=63.56 Aligned_cols=50 Identities=22% Similarity=0.589 Sum_probs=40.4
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++..|.||++.... .....||. |.+|..|+.+|+..+ ..|++|+..+..
T Consensus 3 ~~~~~C~IC~~~~~~-~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPSN-YSMALPCL-----HAFCYVCITRWIRQN--PTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCCS-CEEETTTT-----EEESTTHHHHHHHHS--CSTTTTCCCCCC
T ss_pred CCCCCCeeCCccccC-CcEecCCC-----CeeHHHHHHHHHhCc--CcCcCCChhhHh
Confidence 466789999987642 24678986 789999999999764 689999999863
No 19
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=1e-06 Score=63.42 Aligned_cols=52 Identities=29% Similarity=0.637 Sum_probs=41.8
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh-cCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST-KGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~-kg~~~CEICK~ey~~ 254 (285)
.++...|.||++... ++..+||. |.||..||.+|+.. .+...|++|+..+..
T Consensus 17 ~~~~~~C~IC~~~~~--~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 17 LQEEVICPICLDILQ--KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCBCTTTCSBCS--SEEECTTC-----CEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred CccCCEeccCCcccC--CeEEcCCC-----ChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 456789999998765 46777886 78999999999974 346799999998763
No 20
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=2.8e-07 Score=66.24 Aligned_cols=48 Identities=25% Similarity=0.728 Sum_probs=39.8
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++.... ..+||. |.||..|+.+|+.. ...|++|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~---~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 13 TDEEECCICMDGRAD---LILPCA-----HSFCQKCIDKWSDR--HRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCCSSSCCSCCS---EEETTT-----EEECHHHHHHSSCC--CSSCHHHHHCTTC
T ss_pred CCCCCCeeCCcCccC---cccCCC-----CcccHHHHHHHHHC--cCcCCCcCCcccC
Confidence 456789999988654 778986 78999999999973 6799999988763
No 21
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.14 E-value=1.8e-06 Score=63.02 Aligned_cols=52 Identities=25% Similarity=0.631 Sum_probs=41.9
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhc----CCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTK----GNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~k----g~~~CEICK~ey~~ 254 (285)
.++...|.||++... ++..+||. |.||..||.+|+... +...|++|+..+..
T Consensus 16 ~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 16 IKEEVTCPICLELLK--EPVSADCN-----HSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCTTTSCTTTCSCCS--SCEECTTS-----CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred CccCCCCcCCChhhC--cceeCCCC-----CHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 345678999998764 35678886 689999999999884 36899999999763
No 22
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.12 E-value=1.4e-06 Score=62.30 Aligned_cols=52 Identities=23% Similarity=0.616 Sum_probs=40.7
Q ss_pred cCCCCeeeEeccCCCC----CC-eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEE----GN-TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~----g~-~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.+++..|.||++...+ ++ ...++|. |.+|..||.+|+..+ ..|++|+..+..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINH 63 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCCBCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCC-----ChHhHHHHHHHHHcC--CCCCCCCCccCh
Confidence 3567789999987532 22 2578887 789999999999875 599999999863
No 23
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.10 E-value=2.8e-06 Score=63.99 Aligned_cols=53 Identities=21% Similarity=0.508 Sum_probs=43.8
Q ss_pred cccCCCCeeeEeccCCCCCCeeecc-cccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 194 EIAEEEAVCRICLDICEEGNTLKME-CSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 194 e~~ee~~~CRICle~~e~g~~Li~P-C~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
+..++.-.|.||++.+. ++..+| |. |.|+..||.+|+...+...|++|+..+.
T Consensus 8 ~~~~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMT--DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCCCTTTEETTTTEECS--SCEECTTTC-----CEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred ccCCcCCCCCCCChhhc--CceECCCCC-----CHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 33466789999998765 477888 76 7899999999998877789999999973
No 24
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.08 E-value=1.7e-06 Score=61.63 Aligned_cols=51 Identities=20% Similarity=0.486 Sum_probs=40.2
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.++...|.||++... ++..++|. |.+|..||.+|+. ++...|++|+..+..
T Consensus 12 ~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLC--SPKQTECG-----HRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp CCCCEECTTTCCEES--SCCCCSSS-----CCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred CCcCCCCCCCChHhc--CeeECCCC-----CHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 356788999998764 35567886 6799999999996 345689999998763
No 25
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=2.1e-06 Score=65.23 Aligned_cols=53 Identities=19% Similarity=0.572 Sum_probs=40.7
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++....|-||++....+.. -. .|. +.||..||.+||+.+++.+|++|+.++..
T Consensus 12 ~~~i~~C~IC~~~i~~g~~-C~--~C~---h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 12 PDAVKICNICHSLLIQGQS-CE--TCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSSSCBCSSSCCBCSSSEE-CS--SSC---CEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred cCCCCcCcchhhHcccCCc-cC--CCC---chhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 4566789999988765421 12 443 67999999999988766899999998764
No 26
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=2.9e-06 Score=61.96 Aligned_cols=52 Identities=29% Similarity=0.673 Sum_probs=41.8
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh----cCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST----KGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~----kg~~~CEICK~ey~~ 254 (285)
.++...|.||++... ++..+||. |.||..|+.+|+.. .+...|++|+..+..
T Consensus 16 ~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 16 VKEEVTCPICLELLT--QPLSLDCG-----HSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCTTTCSCCS--SCBCCSSS-----CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred ccCCCCCCCCCcccC--CceeCCCC-----CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 345678999998764 35667886 68999999999987 346799999999873
No 27
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=2.6e-06 Score=61.82 Aligned_cols=49 Identities=22% Similarity=0.525 Sum_probs=39.6
Q ss_pred CCCCeeeEeccCCCCCCeee-cccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLK-MECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li-~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++...+ +.. .+|. |.||..||.+|+.. ...|++|+..+..
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 13 TPYILCSICKGYLID--ATTITECL-----HTFCKSCIVRHFYY--SNRCPKCNIVVHQ 62 (72)
T ss_dssp CGGGSCTTTSSCCSS--CEECSSSC-----CEECHHHHHHHHHH--CSSCTTTCCCCCS
T ss_pred CCCCCCCCCChHHHC--cCEECCCC-----CHHHHHHHHHHHHc--CCcCCCcCcccCc
Confidence 456789999987653 555 4887 78999999999977 4689999999864
No 28
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.02 E-value=2.6e-06 Score=59.40 Aligned_cols=50 Identities=24% Similarity=0.630 Sum_probs=39.3
Q ss_pred CCCeeeEeccCCCC----CC-eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 198 EEAVCRICLDICEE----GN-TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle~~e~----g~-~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+...|.||++...+ ++ ...++|. |.+|..|+.+|+.. +..|++|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCC-----CchhHHHHHHHHHc--CCCCCCCCccCCc
Confidence 45689999987642 12 2568887 78999999999987 4699999999764
No 29
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=4.9e-06 Score=58.62 Aligned_cols=47 Identities=30% Similarity=0.675 Sum_probs=37.5
Q ss_pred ccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhc-CCCcccCC
Q 023250 195 IAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTK-GNKNCEVC 248 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~k-g~~~CEIC 248 (285)
..+++..|.||++... ++.++||. |.||..||.+|+... +...|++|
T Consensus 16 ~~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQ--KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCS--SCEECTTS-----SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred hCccCCCCCcCCchhC--CeEEeCCC-----CcchHHHHHHHHHcCCCCCcCcCC
Confidence 3456788999998765 46777886 789999999999853 46789998
No 30
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=4.3e-06 Score=57.47 Aligned_cols=46 Identities=30% Similarity=0.805 Sum_probs=36.5
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh-cCCCcccCC
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST-KGNKNCEVC 248 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~-kg~~~CEIC 248 (285)
.++...|.||++...+ +..++|. |.||..||.+|+.. .+...|++|
T Consensus 12 ~~~~~~C~IC~~~~~~--p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKE--PVIIECG-----HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSS--CCCCSSC-----CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cccCCCCccCCcccCc--cEeCCCC-----CccCHHHHHHHHHhcCCCCCCCCC
Confidence 3566789999988653 5678886 68999999999864 456799998
No 31
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.98 E-value=4.8e-06 Score=60.87 Aligned_cols=51 Identities=16% Similarity=0.406 Sum_probs=41.9
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
..++-.|.||++... ++.+++|. |.|+..||.+|+.. +...|++|+..+..
T Consensus 5 ~~~~~~C~IC~~~~~--~Pv~~~Cg-----H~fc~~Ci~~~~~~-~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 5 FPEYFRCPISLELMK--DPVIVSTG-----QTYERSSIQKWLDA-GHKTCPKSQETLLH 55 (78)
T ss_dssp CSSSSSCTTTSCCCS--SEEEETTT-----EEEEHHHHHHHHTT-TCCBCTTTCCBCSS
T ss_pred CcccCCCCCcccccc--CCEEcCCC-----CeecHHHHHHHHHH-CcCCCCCCcCCCCh
Confidence 356789999998764 57888886 78999999999974 46799999999864
No 32
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.97 E-value=1.2e-06 Score=71.64 Aligned_cols=49 Identities=24% Similarity=0.489 Sum_probs=0.4
Q ss_pred CCeeeEeccCCCC-------------CC--e-eecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 199 EAVCRICLDICEE-------------GN--T-LKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 199 ~~~CRICle~~e~-------------g~--~-Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
...|-||++.+++ ++ . +..+|. |.||..||.+||.. +..||+|+.+|.+
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~-----H~FH~~CI~~Wl~~--~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEF 112 (117)
T ss_dssp C-----------------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcC-----ceEcHHHHHHHHHc--CCcCCCCCCeeee
Confidence 3579999987643 11 1 124676 78999999999987 4689999999764
No 33
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.88 E-value=9.5e-06 Score=61.35 Aligned_cols=57 Identities=23% Similarity=0.465 Sum_probs=45.6
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecccc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLPV 257 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vpv 257 (285)
+++..|.||++..+..+....||.|. |.|++.||.+|... +...|++|+..|..-++
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CG---H~fC~~Cl~~~~~~-~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCG---YQICRFCWHRIRTD-ENGLCPACRKPYPEDPA 65 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTS---CCCCHHHHHHHTTS-SCSBCTTTCCBCSSCSS
T ss_pred ccCCcCCccCccCccccccccccCCC---CCcCHHHHHHHHhc-CCCCCCCCCCccCCCch
Confidence 56678999999876555667888884 67999999999754 46799999999986554
No 34
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.87 E-value=2e-06 Score=70.07 Aligned_cols=50 Identities=20% Similarity=0.633 Sum_probs=40.5
Q ss_pred CCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceeccc
Q 023250 198 EEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLP 256 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vp 256 (285)
++..|.||++.+. ++..+||. |.||..||.+|+.. ...||+|+..+...+
T Consensus 52 ~~~~C~iC~~~~~--~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 52 NELQCIICSEYFI--EAVTLNCA-----HSFCSYCINEWMKR--KIECPICRKDIKSKT 101 (138)
T ss_dssp HHSBCTTTCSBCS--SEEEETTS-----CEEEHHHHHHHTTT--CSBCTTTCCBCCCEE
T ss_pred ccCCCcccCcccC--CceECCCC-----CCccHHHHHHHHHc--CCcCCCCCCcCCCCC
Confidence 4457999998764 47788986 78999999999976 468999999986543
No 35
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.85 E-value=2.8e-06 Score=61.83 Aligned_cols=52 Identities=27% Similarity=0.650 Sum_probs=41.7
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhc-----CCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTK-----GNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~k-----g~~~CEICK~ey~~ 254 (285)
.++...|.||++.+. ++..+||. |.||..||.+|+... +...|++|+..+..
T Consensus 9 ~~~~~~C~IC~~~~~--~p~~l~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 9 VQEEVTCPICLELLT--EPLSLDCG-----HSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCEETTTTEECS--SCCCCSSS-----CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cccCCCCcCCCcccC--CeeECCCC-----CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 356788999998764 35667886 689999999999863 36799999999863
No 36
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.81 E-value=1.5e-05 Score=61.71 Aligned_cols=53 Identities=25% Similarity=0.541 Sum_probs=43.0
Q ss_pred CCCCeeeEeccCCCCCCeee-cccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecccc
Q 023250 197 EEEAVCRICLDICEEGNTLK-MECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLPV 257 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li-~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vpv 257 (285)
+++..|.||++... ++.. .+|. |.||..||.+|+..++ ..|++|+..+..-.+
T Consensus 20 ~~~~~C~IC~~~~~--~p~~~~~Cg-----H~FC~~Ci~~~~~~~~-~~CP~Cr~~~~~~~l 73 (100)
T 3lrq_A 20 AEVFRCFICMEKLR--DARLCPHCS-----KLCCFSCIRRWLTEQR-AQCPHCRAPLQLREL 73 (100)
T ss_dssp HHHTBCTTTCSBCS--SEEECTTTC-----CEEEHHHHHHHHHHTC-SBCTTTCCBCCGGGC
T ss_pred CCCCCCccCCcccc--CccccCCCC-----ChhhHHHHHHHHHHCc-CCCCCCCCcCCHHHh
Confidence 46678999998875 4676 8997 7899999999998853 689999999865333
No 37
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.72 E-value=1.2e-05 Score=57.14 Aligned_cols=51 Identities=22% Similarity=0.519 Sum_probs=38.4
Q ss_pred CCCeeeEecc-CCCCCC--eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 198 EEAVCRICLD-ICEEGN--TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle-~~e~g~--~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++..|.||++ ...... .+..+|. |.+|..|+.+|+.. +...|++|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCG-----HTLCESCVDLLFVR-GAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTC-----CCEEHHHHHHHHHT-TSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCC-----CHhHHHHHHHHHHc-CCCcCCCCCCcccc
Confidence 3567999998 443221 2467887 68999999999875 35789999999864
No 38
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.69 E-value=2.1e-05 Score=62.52 Aligned_cols=50 Identities=22% Similarity=0.480 Sum_probs=40.7
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++... ++..+||. |.||..||.+|+.. +...|++|+..+..
T Consensus 50 ~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVF--RPITTVCQ-----HNVCKDCLDRSFRA-QVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCS--SEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHc--CcEEeeCC-----CcccHHHHHHHHhH-CcCCCCCCCccCCC
Confidence 34578999998765 57778986 68999999999984 35699999999864
No 39
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.66 E-value=1.4e-05 Score=62.52 Aligned_cols=58 Identities=21% Similarity=0.518 Sum_probs=44.2
Q ss_pred CCCCeeeEeccCCCC----CC-eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecccceecc
Q 023250 197 EEEAVCRICLDICEE----GN-TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLPVTLLR 261 (285)
Q Consensus 197 ee~~~CRICle~~e~----g~-~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vpvtllR 261 (285)
.++..|-||++.+.+ +. ...++|. |.||..||.+|+..+ ..|++|+..+....+..+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~l~~l~ 67 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINHKRYHPIY 67 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTC-----CEEEHHHHHHHHTTC--SBCTTTCCBCTTTCEEECB
T ss_pred CCCCCCcccChhhhCccccccCeEecCCC-----ChhhHHHHHHHHHhC--CCCCCCCCcCccccccccc
Confidence 456789999987642 22 2678997 789999999999764 5999999999865554443
No 40
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.64 E-value=2.6e-05 Score=64.90 Aligned_cols=48 Identities=38% Similarity=0.816 Sum_probs=38.9
Q ss_pred CCCeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 198 EEAVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
+...|.||++... ++... ||. |.||..|+.+|+.. +...|++|+..+.
T Consensus 53 ~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLK--NTMTTKECL-----HRFCADCIITALRS-GNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCS--SEEEETTTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCC
T ss_pred CCCCCcccChHhh--CcCEeCCCC-----ChhHHHHHHHHHHh-CcCCCCCCCCcCC
Confidence 4568999998765 36654 886 78999999999985 3578999999985
No 41
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.62 E-value=2.8e-05 Score=59.42 Aligned_cols=49 Identities=20% Similarity=0.545 Sum_probs=39.8
Q ss_pred CCCCeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++... ++... +|. |.||..|+.+|+.. ...|++|+..+..
T Consensus 20 ~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 20 DDLLRCGICFEYFN--IAMIIPQCS-----HNYCSLCIRKFLSY--KTQCPTCCVTVTE 69 (99)
T ss_dssp HHHTBCTTTCSBCS--SEEECTTTC-----CEEEHHHHHHHHTT--CCBCTTTCCBCCG
T ss_pred CCCCCcccCChhhC--CcCEECCCC-----CHhhHHHHHHHHHC--CCCCCCCCCcCCh
Confidence 45678999998765 36555 886 78999999999975 4699999999874
No 42
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.58 E-value=2.7e-05 Score=60.05 Aligned_cols=50 Identities=20% Similarity=0.699 Sum_probs=40.1
Q ss_pred CCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhc-CCCcccCCCcceec
Q 023250 198 EEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTK-GNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~k-g~~~CEICK~ey~~ 254 (285)
+...|.||++... ++..+||. |.||..||.+|+..+ +...|++|+..+..
T Consensus 20 ~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIK--EPVSTKCD-----HIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCS--SCCBCTTS-----CCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhc--CeEECCCC-----CHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 4568999998764 45677886 789999999999864 34689999998764
No 43
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.57 E-value=2.8e-05 Score=74.81 Aligned_cols=63 Identities=27% Similarity=0.601 Sum_probs=44.0
Q ss_pred ccCCCCeeeEeccCCCCCCee-ecccc---cCCCcceecHHHHHHHHHhcCC---------CcccCCCcceecccceec
Q 023250 195 IAEEEAVCRICLDICEEGNTL-KMECS---CKGALRLVHEECAIRWFSTKGN---------KNCEVCGKEVQNLPVTLL 260 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~~L-i~PC~---CkGSl~~VH~~CL~kWl~~kg~---------~~CEICK~ey~~vpvtll 260 (285)
.++....|-||++...+++.+ ...|. |+ +.||..||.+||....+ ..|+.|++.+..-...||
T Consensus 304 ~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~---h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf~~ll 379 (381)
T 3k1l_B 304 EDNEELRCNICFAYRLDGGEVPLVSCDNAKCV---LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSFAALL 379 (381)
T ss_dssp CCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCC---CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGGGGGS
T ss_pred cccCCccCcccceeecCCCCCccccccCCccC---CccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCccHHHHh
Confidence 346778999999887653333 34453 54 68999999999976422 589999998774433443
No 44
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.57 E-value=2.8e-05 Score=60.40 Aligned_cols=49 Identities=22% Similarity=0.628 Sum_probs=40.3
Q ss_pred CCCCeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++..|.||++... ++... +|. |.||..||.+|+... ..|++|+..+..
T Consensus 13 ~~~~~C~IC~~~~~--~p~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFI--DATTIIECL-----HSFCKTCIVRYLETS--KYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCS--SEEEETTTC-----CEEEHHHHHHHHTSC--SBCTTTCCBSCS
T ss_pred CCcCCCccCChHHh--CcCEeCCCC-----ChhhHHHHHHHHHhC--CcCcCCCccccc
Confidence 45678999998764 46665 887 789999999999764 799999999874
No 45
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.49 E-value=5.5e-05 Score=63.12 Aligned_cols=50 Identities=20% Similarity=0.505 Sum_probs=41.1
Q ss_pred CCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecc
Q 023250 198 EEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNL 255 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~v 255 (285)
+...|.||++.+. ++.++||. |.|+..||.+|+.. +...|++|+..+..-
T Consensus 77 ~~~~C~IC~~~~~--~pv~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVY--QPVTTECF-----HNVCKDCLQRSFKA-QVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCS--SEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhc--CCEEcCCC-----CchhHHHHHHHHHh-CCCcCCCCCccCCCC
Confidence 4578999998764 47788987 68999999999986 346899999998754
No 46
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.45 E-value=3.9e-05 Score=60.18 Aligned_cols=50 Identities=20% Similarity=0.503 Sum_probs=40.8
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++... ++..++|. |.||..||.+|+... ...|++|+..+..
T Consensus 21 ~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~-~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 21 VKSISCQICEHILA--DPVETSCK-----HLFCRICILRCLKVM-GSYCPSCRYPCFP 70 (116)
T ss_dssp HHHTBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHHHHT-CSBCTTTCCBCCG
T ss_pred cCCCCCCCCCcHhc--CcEEcCCC-----CcccHHHHHHHHhHC-cCcCCCCCCCCCH
Confidence 44678999998764 46778886 789999999999874 4689999999864
No 47
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.38 E-value=9.8e-05 Score=58.43 Aligned_cols=51 Identities=22% Similarity=0.475 Sum_probs=40.9
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.++...|.||++... ++..++|. |.|+..||.+|+...+ ..|++|+..+..
T Consensus 15 ~~~~~~C~IC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 65 (118)
T 3hct_A 15 LESKYECPICLMALR--EAVQTPCG-----HRFCKACIIKSIRDAG-HKCPVDNEILLE 65 (118)
T ss_dssp CCGGGBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHHHHHC-SBCTTTCCBCCG
T ss_pred CCCCCCCCcCChhhc--CeEECCcC-----ChhhHHHHHHHHhhCC-CCCCCCCCCcCH
Confidence 345678999998764 46778886 7899999999998753 489999998864
No 48
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.38 E-value=6.9e-05 Score=58.56 Aligned_cols=51 Identities=24% Similarity=0.626 Sum_probs=39.1
Q ss_pred CCCCeeeEeccCCCC----CC-eeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEE----GN-TLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~----g~-~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++...+ +. ....+|. |.+|..|+.+|+..+ ..|++|+..+..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTS-----BEEEHHHHHHHHHHC--SBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCC-----ChhhHHHHHHHHHcC--CCCCCCCCcCCh
Confidence 456679999987532 22 2456776 789999999999874 599999999864
No 49
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.29 E-value=2.2e-05 Score=61.52 Aligned_cols=50 Identities=20% Similarity=0.540 Sum_probs=40.6
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++..|.||++... ++..+||. |.||..||.+|+.. +...|++|+..+..
T Consensus 13 ~~~~~C~iC~~~~~--~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILV--EPVTLPCN-----HTLCKPCFQSTVEK-ASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCS--SCEECTTS-----CEECHHHHCCCCCT-TTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccC--ceeEcCCC-----CHHhHHHHHHHHhH-CcCCCCCCCcccCc
Confidence 45678999998764 46778886 78999999999965 35789999999864
No 50
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.29 E-value=0.00016 Score=69.92 Aligned_cols=51 Identities=20% Similarity=0.569 Sum_probs=41.3
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNL 255 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~v 255 (285)
.....|.||++... ++...||. |.+|..|+.+|+.. ....|++|+..+...
T Consensus 330 ~~~~~C~ICle~~~--~pv~lpCG-----H~FC~~Ci~~wl~~-~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 330 STFQLCKICAENDK--DVKIEPCG-----HLMCTSCLTSWQES-EGQGCPFCRCEIKGT 380 (389)
T ss_dssp TSSSBCTTTSSSBC--CEEEETTC-----CEECHHHHHHHHHH-TCSBCTTTCCBCCEE
T ss_pred CCCCCCCccCcCCC--CeEEeCCC-----ChhhHHHHHHHHhc-CCCCCCCCCCccCCc
Confidence 34579999998763 57789997 67899999999984 356899999998754
No 51
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.19 E-value=0.00014 Score=52.26 Aligned_cols=50 Identities=22% Similarity=0.345 Sum_probs=37.9
Q ss_pred cCCCCeeeEeccCCCCCCeee--cccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLK--MECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li--~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.+....|.||++... +..+ .||. |. +-..|+.+|... ...|++|+..+..
T Consensus 4 ~~~~~~C~IC~~~~~--~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~~ 56 (63)
T 2vje_B 4 QNLLKPCSLCEKRPR--DGNIIHGRTG-----HLVTCFHCARRLKKA--GASCPICKKEIQL 56 (63)
T ss_dssp GGGGSBCTTTSSSBS--CEEEEETTEE-----EEEECHHHHHHHHHT--TCBCTTTCCBCCE
T ss_pred CCcCCCCcccCCcCC--CeEEEecCCC-----CHhHHHHHHHHHHHh--CCcCCCcCchhhc
Confidence 455678999998653 3334 4997 44 789999999865 3689999999863
No 52
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=97.09 E-value=0.00056 Score=51.79 Aligned_cols=50 Identities=6% Similarity=0.103 Sum_probs=41.3
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
..++-.|-||++-.. ++++.||. +.+-+.||.+|+.. ..+|++|+..+..
T Consensus 11 ~p~~~~CpI~~~~m~--dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 11 APDEFRDPLMDTLMT--DPVRLPSG-----TVMDRSIILRHLLN--SPTDPFNRQMLTE 60 (85)
T ss_dssp CCTTTBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCCG
T ss_pred CchheECcccCchhc--CCeECCCC-----CEECHHHHHHHHhc--CCCCCCCcCCCCh
Confidence 356789999998765 58999975 57889999999985 4699999998764
No 53
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=97.01 E-value=0.0011 Score=51.91 Aligned_cols=50 Identities=6% Similarity=0.122 Sum_probs=41.4
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
..++-.|-||++-.. +++++||. +.+-+.||.+|+.. ..+|++|+..+..
T Consensus 26 ~p~~~~CpI~~~~m~--dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 75 (100)
T 2kre_A 26 APDEFRDPLMDTLMT--DPVRLPSG-----TIMDRSIILRHLLN--SPTDPFNRQTLTE 75 (100)
T ss_dssp CSTTTBCTTTCSBCS--SEEEETTT-----EEEEHHHHHHHTTS--CSBCSSSCCBCCT
T ss_pred CcHhhCCcCccCccc--CCeECCCC-----CEEchHHHHHHHHc--CCCCCCCCCCCCh
Confidence 356789999998765 58999985 57899999999974 5799999999864
No 54
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.91 E-value=0.00011 Score=51.29 Aligned_cols=46 Identities=13% Similarity=0.267 Sum_probs=36.6
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++.+. ++..+||. |.++..|+.+| ...|++|+..+..
T Consensus 4 ~~~~~C~IC~~~~~--~p~~l~Cg-----H~fC~~Ci~~~-----~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAK--CPKLLPCL-----HTLCSGCLEAS-----GMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCB--CCSCSTTS-----CCSBTTTCSSS-----SSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccC--CeEEcCCC-----CcccHHHHccC-----CCCCCcCCcEeec
Confidence 46678999998765 46788986 67899998884 4689999999764
No 55
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=96.81 E-value=0.00015 Score=53.33 Aligned_cols=45 Identities=27% Similarity=0.630 Sum_probs=37.0
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++..|.||++... +++.+||. |. +...|+.+| ..|++|+..+..
T Consensus 22 ~~~~~C~iC~~~~~--~~~~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 22 QEEKLCKICMDRNI--AIVFVPCG-----HLVTCKQCAEAV------DKCPMCYTVITF 67 (74)
T ss_dssp HHHTBCTTTSSSBC--CEEEETTC-----CBCCCHHHHTTC------SBCTTTCCBCSE
T ss_pred ccCCCCCCCCCCCC--CEEEcCCC-----ChhHHHHhhhcC------ccCCCcCcCccC
Confidence 45678999998653 57788997 56 999999999 589999999874
No 56
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.74 E-value=0.00017 Score=56.92 Aligned_cols=46 Identities=20% Similarity=0.503 Sum_probs=38.3
Q ss_pred CCCCeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 197 EEEAVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
++...|.||++.+. ++..+ +|. |.|+..||.+|+. ..|++|+..+.
T Consensus 20 ~~~~~C~IC~~~~~--~pv~~~~Cg-----H~fC~~Ci~~~~~----~~CP~Cr~~~~ 66 (117)
T 1jm7_B 20 EKLLRCSRCTNILR--EPVCLGGCE-----HIFCSNCVSDCIG----TGCPVCYTPAW 66 (117)
T ss_dssp HHTTSCSSSCSCCS--SCBCCCSSS-----CCBCTTTGGGGTT----TBCSSSCCBCS
T ss_pred hhCCCCCCCChHhh--CccEeCCCC-----CHHHHHHHHHHhc----CCCcCCCCcCc
Confidence 46789999998764 46666 886 7899999999997 58999999985
No 57
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.72 E-value=0.0011 Score=57.62 Aligned_cols=50 Identities=6% Similarity=0.023 Sum_probs=40.4
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.+.-.|-||++-.. ++++.||. |.+-+.||.+|+...+ .+||+|+..+..
T Consensus 206 ~~~~~c~i~~~~~~--dPv~~~~g-----h~f~~~~i~~~~~~~~-~~cP~~~~~~~~ 255 (281)
T 2c2l_A 206 PDYLCGKISFELMR--EPCITPSG-----ITYDRKDIEEHLQRVG-HFNPVTRSPLTQ 255 (281)
T ss_dssp CSTTBCTTTCSBCS--SEEECSSC-----CEEETTHHHHHHHHTC-SSCTTTCCCCCG
T ss_pred CcccCCcCcCCHhc--CCeECCCC-----CEECHHHHHHHHHHCC-CCCcCCCCCCch
Confidence 35678999998764 58999985 5788999999998754 349999998863
No 58
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=96.68 E-value=0.00062 Score=48.95 Aligned_cols=48 Identities=27% Similarity=0.431 Sum_probs=36.3
Q ss_pred CCCeeeEeccCCCCCCeeec--ccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 198 EEAVCRICLDICEEGNTLKM--ECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~--PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++..|.||++... +.... ||. |. +=..|+.+|... +..|++|+..+..
T Consensus 7 ~~~~C~IC~~~~~--~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~~ 57 (64)
T 2vje_A 7 AIEPCVICQGRPK--NGCIVHGKTG-----HLMACFTCAKKLKKR--NKPCPVCRQPIQM 57 (64)
T ss_dssp GGSCCTTTSSSCS--CEEEEETTEE-----EEEECHHHHHHHHHT--TCCCTTTCCCCCE
T ss_pred CcCCCCcCCCCCC--CEEEECCCCC-----ChhhHHHHHHHHHHc--CCcCCCcCcchhc
Confidence 4568999998753 34544 997 45 458999999975 4689999998863
No 59
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.67 E-value=0.0023 Score=49.94 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=41.1
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
..++-.|-||++-+. ++++.||. | +.|-+.||.+|+.. ..+|++|+..+..
T Consensus 19 ~p~~~~CpI~~~~m~--dPV~~~cG--~--htf~r~cI~~~l~~--~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 19 ACDEFLDPIMSTLMC--DPVVLPSS--R--VTVDRSTIARHLLS--DQTDPFNRSPLTM 69 (98)
T ss_dssp CCTTTBCTTTCSBCS--SEEECTTT--C--CEEEHHHHHHHTTT--SCBCTTTCSBCCT
T ss_pred CcHhcCCcCcccccc--CCeECCCC--C--eEECHHHHHHHHHh--CCCCCCCCCCCCh
Confidence 356789999998765 58889875 1 46889999999976 4689999999874
No 60
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=96.53 E-value=0.0004 Score=57.37 Aligned_cols=51 Identities=22% Similarity=0.505 Sum_probs=40.3
Q ss_pred ccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 195 IAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
..++.-.|.||++... +++.++|. |.|+..||.+|+.. +...|++|+.++.
T Consensus 27 ~l~~~~~C~IC~~~~~--~pv~~~Cg-----H~FC~~Ci~~~~~~-~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 27 KLEAKYLCSACRNVLR--RPFQAQCG-----HRYCSFCLASILSS-GPQNCAACVHEGI 77 (141)
T ss_dssp GCCGGGBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHGGG-SCEECHHHHHTTC
T ss_pred cCCcCcCCCCCChhhc--CcEECCCC-----CccCHHHHHHHHhc-CCCCCCCCCCccc
Confidence 3456778999998764 46778886 78999999999975 3468999999753
No 61
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=96.43 E-value=0.0017 Score=58.31 Aligned_cols=56 Identities=20% Similarity=0.576 Sum_probs=41.8
Q ss_pred CCCeeeEeccCCCCCCeeecccc-cCCCcceecHHHHHHHHHhcCCCcccCCCcceecccceec
Q 023250 198 EEAVCRICLDICEEGNTLKMECS-CKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLPVTLL 260 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~PC~-CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vpvtll 260 (285)
.-..|.||.+-...| .-|. |. ..+|..|+.+|+...++..|+.|+..+..-...+.
T Consensus 179 ~i~~C~iC~~iv~~g----~~C~~C~---~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~~~~~ 235 (238)
T 3nw0_A 179 AVKICNICHSLLIQG----QSCETCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIPKVF 235 (238)
T ss_dssp TCCBCTTTCSBCSSC----EECSSSC---CEECHHHHHHHTTTCSSCBCTTTCCBCCSCCCCCC
T ss_pred CCCcCcchhhHHhCC----cccCccC---hHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Confidence 478899998776544 1232 43 57999999999988777899999998765544443
No 62
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.30 E-value=0.0019 Score=47.12 Aligned_cols=49 Identities=22% Similarity=0.479 Sum_probs=37.2
Q ss_pred ccccCCCCeeeEeccCCCCCCeeecccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKMECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+...++...|.||++... +.+.+||. |. +-..|+.+ ...|++|+..+..
T Consensus 9 e~~~~~~~~C~IC~~~~~--~~v~~pCg-----H~~~C~~C~~~------~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 9 EPSEENSKDCVVCQNGTV--NWVLLPCR-----HTCLCDGCVKY------FQQCPMCRQFVQE 58 (68)
T ss_dssp CCSCCCSSCCSSSSSSCC--CCEETTTT-----BCCSCTTHHHH------CSSCTTTCCCCCC
T ss_pred cccCCCCCCCCCcCcCCC--CEEEECCC-----ChhhhHHHHhc------CCCCCCCCcchhc
Confidence 344456789999998643 56789998 45 78899883 3689999999875
No 63
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.28 E-value=0.0023 Score=53.23 Aligned_cols=51 Identities=22% Similarity=0.475 Sum_probs=40.6
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.++.-.|.||++... +++..+|. +.|...|+.+|+..++ ..|++|+..+..
T Consensus 15 ~~~~~~C~IC~~~~~--~pv~~~Cg-----H~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 15 LESKYECPICLMALR--EAVQTPCG-----HRFCKACIIKSIRDAG-HKCPVDNEILLE 65 (170)
T ss_dssp CCGGGBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHHHHHC-SBCTTTCCBCCG
T ss_pred CCCCCCCCCCChhhc--CcEECCCC-----CHHHHHHHHHHHHhCC-CCCCCCccCcch
Confidence 345678999998764 46777775 7899999999998753 489999998764
No 64
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.14 E-value=0.0024 Score=46.67 Aligned_cols=45 Identities=27% Similarity=0.630 Sum_probs=35.1
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
++...|.||++... ++..+||. |. +...|+.++ ..|++|+..+..
T Consensus 23 ~~~~~C~IC~~~~~--~~~~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRNI--AIVFVPCG-----HLVTCKQCAEAV------DKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSCC--CBCCSSSC-----CCCBCHHHHHHC------SBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCCC--CEEEecCC-----CHHHHHHHhhCC------CCCccCCceecC
Confidence 34568999998753 46778997 56 899999643 689999999875
No 65
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.13 E-value=0.0045 Score=47.40 Aligned_cols=48 Identities=17% Similarity=0.439 Sum_probs=38.9
Q ss_pred CCCCeeeEeccCCCCCCeeecc-cccCCCcceecHHHHHHHHHhc----CCCcccC--CCcc
Q 023250 197 EEEAVCRICLDICEEGNTLKME-CSCKGALRLVHEECAIRWFSTK----GNKNCEV--CGKE 251 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~P-C~CkGSl~~VH~~CL~kWl~~k----g~~~CEI--CK~e 251 (285)
.++-.|-||++.+. ++++.| |. |.|-+.||.+|+... +..+|++ |...
T Consensus 5 ~~~~~CPI~~~~~~--dPV~~~~cG-----h~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMK--KPVKNKVCG-----HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCS--SEEEESSSC-----CEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhc--CCEEcCCCC-----CeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 46678999998765 588886 86 678999999999864 3579999 9865
No 66
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=95.90 E-value=0.0047 Score=53.72 Aligned_cols=50 Identities=6% Similarity=0.018 Sum_probs=41.1
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
.+.-.|.||++-+. ++++.||. +.+=+.||.+|+...+. +||+|+..+..
T Consensus 104 p~~f~CPI~~elm~--DPV~~~~G-----htfer~~I~~~l~~~~~-tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELMR--EPCITPSG-----ITYDRKDIEEHLQRVGH-FDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBCS--SEEECTTS-----CEEEHHHHHHHHHHTCS-BCTTTCCBCCG
T ss_pred cHhhcccCccccCC--CCeECCCC-----CEECHHHHHHHHHhCCC-CCCCCcCCCCh
Confidence 46789999998765 58999985 57889999999987554 79999998764
No 67
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.67 E-value=0.0059 Score=46.23 Aligned_cols=51 Identities=18% Similarity=0.446 Sum_probs=38.6
Q ss_pred CCCeeeEeccCCCCCCeee-cccccCCCcceecHHHHHHHHHhc---C---CCcccC--CCccee
Q 023250 198 EEAVCRICLDICEEGNTLK-MECSCKGALRLVHEECAIRWFSTK---G---NKNCEV--CGKEVQ 253 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li-~PC~CkGSl~~VH~~CL~kWl~~k---g---~~~CEI--CK~ey~ 253 (285)
+...|.||++.....+.+. .+|. |.+-..||.+|+..+ + ...|+. |+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~Cg-----H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~ 63 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQ-----CIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGH 63 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTT-----EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCE
T ss_pred CCcCCcccCcccccccceEcCCCC-----CcccHHHHHHHHHHHhhcCCcccccCccccCCCCCc
Confidence 4567999998865444443 4787 689999999999763 2 468999 999843
No 68
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.016 Score=53.71 Aligned_cols=51 Identities=18% Similarity=0.392 Sum_probs=41.7
Q ss_pred CCCCeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccC--CCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEV--CGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEI--CK~ey~~ 254 (285)
..+-.|-||++-+. +++.. .|. |.|=+.||.+|+...+...||+ |+..+..
T Consensus 179 ~~el~CPIcl~~f~--DPVts~~CG-----HsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPYE--APLISRKCN-----HVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBCS--SEEEESSSC-----CEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCccc--CCeeeCCCC-----CcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 56789999998764 57764 776 6788999999998777789999 9998764
No 69
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=94.80 E-value=0.0046 Score=58.39 Aligned_cols=45 Identities=29% Similarity=0.760 Sum_probs=37.3
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
+++..|.||++... +++.+||. |. +...|+.+| ..|++|+..+..
T Consensus 293 ~~~~~C~IC~~~~~--~~v~lpCg-----H~~fC~~C~~~~------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEV--SVVFIPCG-----HLVVCQECAPSL------RKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBC--CEEEETTC-----CEEECTTTGGGC------SBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCC--ceEEcCCC-----ChhHhHHHHhcC------CcCCCCCCCccC
Confidence 46689999998754 57778997 56 999999998 589999999874
No 70
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.24 E-value=0.017 Score=42.61 Aligned_cols=57 Identities=19% Similarity=0.391 Sum_probs=38.4
Q ss_pred ccccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcceeccc
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEVQNLP 256 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey~~vp 256 (285)
++.+.....|.||.+. ++ |+ -|. +=-+.+|..||.-.+.. .+.|.|+.|...-...|
T Consensus 6 ~~~~~~~~~C~vC~~~---~~-ll-~Cd--~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p~P 64 (66)
T 2lri_C 6 QQNLAPGARCGVCGDG---TD-VL-RCT--HCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVTPAP 64 (66)
T ss_dssp TTCCCTTCCCTTTSCC---TT-CE-ECS--SSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCCCCC
T ss_pred ccCCCCCCCcCCCCCC---Ce-EE-ECC--CCCCceecccCCCccCcCCCCCEECccccCCCccCC
Confidence 4455667789999753 33 32 222 22268999999888765 47899999987654444
No 71
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=93.42 E-value=0.023 Score=42.42 Aligned_cols=46 Identities=26% Similarity=0.623 Sum_probs=35.6
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcce-ecHHHHHHHHHhcCCCcccCCCcceecc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRL-VHEECAIRWFSTKGNKNCEVCGKEVQNL 255 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~-VH~~CL~kWl~~kg~~~CEICK~ey~~v 255 (285)
+++..|.||++... +....||. |. +=..|+.+| ..|++|+..+...
T Consensus 16 ~~~~~C~IC~~~~~--~~v~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 16 KEAMLCMVCCEEEI--NSTFCPCG-----HTVCCESCAAQL------QSCPVCRSRVEHV 62 (79)
T ss_dssp HHHTBCTTTSSSBC--CEEEETTC-----BCCBCHHHHTTC------SBCTTTCCBCCEE
T ss_pred CCCCEeEEeCcccC--cEEEECCC-----CHHHHHHHHHhc------CcCCCCCchhhCe
Confidence 34568999998653 57789997 44 668999887 3899999998753
No 72
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=93.34 E-value=0.047 Score=39.11 Aligned_cols=46 Identities=9% Similarity=0.197 Sum_probs=36.1
Q ss_pred CeeeEeccCCCCCCeeec-ccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 200 AVCRICLDICEEGNTLKM-ECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 200 ~~CRICle~~e~g~~Li~-PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
-.|.||++... ++.+. +|. +.+=+.|+++||...+ +|++++..+..
T Consensus 4 ~~CpIs~~~m~--dPV~~~~sG-----~~yer~~I~~~l~~~~--~cP~t~~~L~~ 50 (61)
T 2bay_A 4 MLCAISGKVPR--RPVLSPKSR-----TIFEKSLLEQYVKDTG--NDPITNEPLSI 50 (61)
T ss_dssp CCCTTTCSCCS--SEEEETTTT-----EEEEHHHHHHHHHHHS--BCTTTCCBCCG
T ss_pred EEecCCCCCCC--CCEEeCCCC-----cEEcHHHHHHHHHhCC--CCcCCcCCCCh
Confidence 46889988765 57777 665 5688999999998754 69999988753
No 73
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=85.33 E-value=0.15 Score=39.33 Aligned_cols=53 Identities=32% Similarity=0.619 Sum_probs=34.5
Q ss_pred cCCCCeeeEeccCCC-CCCeeecccc-cCCCcceecHHHHHHHHHhcCCCcccCCCcce
Q 023250 196 AEEEAVCRICLDICE-EGNTLKMECS-CKGALRLVHEECAIRWFSTKGNKNCEVCGKEV 252 (285)
Q Consensus 196 ~ee~~~CRICle~~e-~g~~Li~PC~-CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey 252 (285)
.++...|.||..... .++.|+ -|. |. ..||..|+.-=+.-.+.|.|+.|....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll-~CD~C~---~~fH~~Cl~p~~vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVIL-FCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEE-ECSSSC---CCCCHHHHTCSSCCSSCCCCHHHHHHT
T ss_pred CCCCCcCCcCCCCCCCCCCCEE-ECCCCC---chhhcccCCCCccCCCceECccccCcc
Confidence 356789999987652 223333 332 33 468999986433345789999997653
No 74
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=85.03 E-value=0.77 Score=36.47 Aligned_cols=51 Identities=25% Similarity=0.478 Sum_probs=36.6
Q ss_pred CCCeeeEeccCC---CCCCeee--cccccCCCcceecHHHHHHHHHhcCCCcccCCCcceec
Q 023250 198 EEAVCRICLDIC---EEGNTLK--MECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQN 254 (285)
Q Consensus 198 e~~~CRICle~~---e~g~~Li--~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~ 254 (285)
...+|.||-+.- ..|+.++ +.|. --|=+.|++-=.+. ++..|+.||.+|.-
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~-----FPvCrpCyEYErke-G~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECG-----FPACRPCYEYERRE-GTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSC-----CCCCHHHHHHHHHT-SCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccC-----ChhhHHHHHHHHhc-cCccccccCCcccc
Confidence 557999998763 3466654 3454 12778998765554 78999999999984
No 75
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=84.10 E-value=0.2 Score=39.21 Aligned_cols=53 Identities=23% Similarity=0.485 Sum_probs=34.2
Q ss_pred ccccCCCCeeeEeccCCCCCCeee--cccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLK--MECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li--~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
+..+++...| ||..... ++ ++ --|.|.. .+||..|+. |.. .+.+.|+.|...-
T Consensus 30 ~~d~~e~~yC-iC~~~~~-g~-MI~CD~~dC~~--~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 30 PVDPNEPTYC-LCHQVSY-GE-MIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCSCCCBCS-TTCCBCC-SC-CCCCSCSSCSC--CCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CcCCCCCcEE-ECCCCCC-CC-EeEecCCCCCC--CCEecccCC--cCcCCCCCEECcCccCcC
Confidence 3334567788 9987543 33 43 2344652 489999987 433 3689999997653
No 76
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=83.16 E-value=0.32 Score=36.13 Aligned_cols=52 Identities=23% Similarity=0.498 Sum_probs=33.6
Q ss_pred ccccCCCCeeeEeccCCCCCCeeec--ccccCCCcceecHHHHHHHHHh--cCCCcccCCCcc
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKM--ECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKE 251 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~--PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~e 251 (285)
+..+++...| ||..... |+ ++. -|.|.. .++|..|+. |.. .+.+.|+.|...
T Consensus 10 ~~d~~~~~~C-~C~~~~~-g~-MI~CD~~~C~~--~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVSY-GE-MIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp CCCTTSCCCS-TTCCCSC-SS-EECCSCSSCSC--CCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred ccCCCCCCEE-ECCCCCC-CC-EeEeeCCCCCC--ccEecccCC--cCcCCCCCEECCCCCcc
Confidence 3334567788 8977543 33 442 334642 489999987 433 368999999764
No 77
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=83.15 E-value=0.049 Score=41.95 Aligned_cols=55 Identities=22% Similarity=0.476 Sum_probs=36.4
Q ss_pred cCCCCeeeEeccCCCC-CCeeecccccCCCcceecHHHHHHHHH------hcCCCcccCCCccee
Q 023250 196 AEEEAVCRICLDICEE-GNTLKMECSCKGALRLVHEECAIRWFS------TKGNKNCEVCGKEVQ 253 (285)
Q Consensus 196 ~ee~~~CRICle~~e~-g~~Li~PC~CkGSl~~VH~~CL~kWl~------~kg~~~CEICK~ey~ 253 (285)
.++..+|.||...... ++.|+.==.|. ..+|..||.-=|. -.+.|.|..|.....
T Consensus 13 ~e~~~~C~vC~~~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 13 MEMGLACVVCRQMTVASGNQLVECQECH---NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HHHCCSCSSSCCCCCCTTCCEEECSSSC---CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCCcCCCCCCCCCCCCCceEECCCCC---CeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 3467899999976542 33443221243 5789999976553 257899999977654
No 78
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=79.47 E-value=0.19 Score=43.49 Aligned_cols=50 Identities=22% Similarity=0.518 Sum_probs=33.5
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
+..+..|.+|..+ |+ ++ -| .|--+.+|..||...+.. .|.|.|+.|...-
T Consensus 4 d~~~~~C~~C~~~---g~-ll-~C--d~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQNG---GD-LL-CC--EKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTCCC---EE-EE-EC--SSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCC---Cc-eE-Ec--CCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 3456779999754 22 32 23 233367999998766643 4789999998754
No 79
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=78.92 E-value=0.29 Score=36.39 Aligned_cols=51 Identities=33% Similarity=0.659 Sum_probs=33.0
Q ss_pred CCCCeeeEeccCC-CCCCeeeccc-ccCCCcceecHHHHHHHHHhcCCCcccCCCcc
Q 023250 197 EEEAVCRICLDIC-EEGNTLKMEC-SCKGALRLVHEECAIRWFSTKGNKNCEVCGKE 251 (285)
Q Consensus 197 ee~~~CRICle~~-e~g~~Li~PC-~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~e 251 (285)
.+...|.||.... ++++.|+ -| .|. ..+|..|+.-=..-.+.|.|+.|...
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll-~CD~C~---~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVIL-FCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEE-ECSSSC---CEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEE-ECCCCC---CccccccCCCCcCCCCCcCCccCcCc
Confidence 4567899998765 2333333 22 233 57999998643334578999999654
No 80
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=77.06 E-value=0.45 Score=34.86 Aligned_cols=53 Identities=15% Similarity=0.286 Sum_probs=33.1
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
.++...|.||....+ ++.++. | .+=-.++|..||.--... .+.+.|+.|....
T Consensus 15 ~~~~~~C~~C~~~~~-~~~mi~-C--D~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 15 GNQIWICPGCNKPDD-GSPMIG-C--DDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SCEEECBTTTTBCCS-SCCEEE-C--SSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCCcCCCCCCCCCC-CCCEEE-c--CCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 345567999977654 333432 2 122269999998644332 2578999997654
No 81
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=73.50 E-value=0.92 Score=30.80 Aligned_cols=47 Identities=21% Similarity=0.531 Sum_probs=28.9
Q ss_pred CeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 200 AVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 200 ~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+.|.||....+.++.+.-- .|. +.+|..||.-=+.. ++.+.|+.|..
T Consensus 1 a~C~vC~~~~~~~~ll~Cd-~C~---~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 1 ARCKVCRKKGEDDKLILCD-ECN---KAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCCTTTCCSSCCSCCEECT-TTC---CEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCCEEECC-CCC---hhhCcccCCCCcCCCCCCcEECcCccc
Confidence 3688998765544333211 233 58999998532222 36799999964
No 82
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=72.73 E-value=0.92 Score=32.37 Aligned_cols=49 Identities=24% Similarity=0.554 Sum_probs=32.1
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~e 251 (285)
.+....|.||... ++.+. | .+=-+.+|..||.-=+.. ++.+.|+.|..+
T Consensus 8 ~~~~~~C~vC~~~---g~ll~--C--D~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQG---GEIIL--C--DTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCC---SSEEE--C--SSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCCC---CcEEE--C--CCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 3566789999863 33332 2 222358999998864432 478999999754
No 83
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=71.87 E-value=0.47 Score=40.16 Aligned_cols=48 Identities=23% Similarity=0.596 Sum_probs=32.0
Q ss_pred CCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 198 EEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 198 e~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
.+..|.+|..+ |+ | .-| .+--..+|..||..-+.. ++.|.|+.|...-
T Consensus 3 ~~~~C~~C~~~---g~-l-l~C--d~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG---GE-L-LCC--EKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC---SS-C-EEC--SSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC---Ce-e-eec--CCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 45679999854 33 2 222 222367999998766643 4689999998753
No 84
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=71.58 E-value=0.28 Score=38.36 Aligned_cols=51 Identities=24% Similarity=0.501 Sum_probs=31.8
Q ss_pred ccccCCCCeeeEeccCCCCCCeee--cccccCCCcceecHHHHHHHHHh--cCCCcccC-CCc
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLK--MECSCKGALRLVHEECAIRWFST--KGNKNCEV-CGK 250 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li--~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEI-CK~ 250 (285)
++.+++...| ||..... |+ +| --|.|.. .+||..|+. |.. .+.+.|+. |..
T Consensus 20 ~~~~~~~~yC-iC~~~~~-g~-MI~CD~c~C~~--eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 20 GNNNQEEVYC-FCRNVSY-GP-MVACDNPACPF--EWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp ----CCSCCS-TTTCCCS-SS-EECCCSSSCSC--SCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCCCCCCcEE-EeCCCCC-CC-EEEecCCCCcc--ccCcCccCC--CCcCCCCCccCChhhcc
Confidence 3445667788 9986543 33 44 3466763 589999986 332 36899999 963
No 85
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=70.81 E-value=0.77 Score=38.23 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=33.9
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH---hcCCCcccCCCcce
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS---TKGNKNCEVCGKEV 252 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~---~kg~~~CEICK~ey 252 (285)
++...| ||....+++..++.=-.|. .++|..|+.--.. ..+.+.|+.|...-
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~---~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQ---NWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTC---CEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCC---chhChhhcCCchhhccCccCeecCCCcchh
Confidence 567789 9987765444455433454 7999999853222 14579999998653
No 86
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=69.99 E-value=2.3 Score=31.56 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=34.4
Q ss_pred ccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh---cCCCcccCCCcce
Q 023250 195 IAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST---KGNKNCEVCGKEV 252 (285)
Q Consensus 195 ~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~---kg~~~CEICK~ey 252 (285)
.+++...| ||...++.+..+|.=-.|. .++|..|+.-=... -..+.|+.|....
T Consensus 8 ~~~~~~~C-~C~~~~d~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 8 MALVPVYC-LCRQPYNVNHFMIECGLCQ---DWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCCS-TTSCSCCSSSCEEEBTTTC---CEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccCCccEE-EcCCccCCCCceEEcCCCC---CcEEeeecCcccccccCCCeEECCCccccc
Confidence 34566777 8987765444455322353 69999998532221 2468999998764
No 87
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=69.60 E-value=0.73 Score=36.00 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=24.3
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS 238 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~ 238 (285)
.++.+|.||.+..+.++ |+ -|. +=-+.+|..||.-++.
T Consensus 5 ~~~~~C~~C~~~g~~~~-ll-~C~--~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLD-QF-FCT--TCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCCSCBTTTCCCCCTTT-SE-ECS--SSCCEECTTTTTCCCC
T ss_pred CCCCCCcCCCCCCCCcC-Ce-ECC--CCCCCcChHHhCCccc
Confidence 46779999987654322 22 222 2226899999987764
No 88
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.93 E-value=0.27 Score=38.12 Aligned_cols=53 Identities=21% Similarity=0.414 Sum_probs=33.0
Q ss_pred cccCCCCeeeEeccCCCCCCeeeccc-ccCCCcceecHHHHHHHHH--hcCCCcccCCCcc
Q 023250 194 EIAEEEAVCRICLDICEEGNTLKMEC-SCKGALRLVHEECAIRWFS--TKGNKNCEVCGKE 251 (285)
Q Consensus 194 e~~ee~~~CRICle~~e~g~~Li~PC-~CkGSl~~VH~~CL~kWl~--~kg~~~CEICK~e 251 (285)
....+...|.||....+.+. |+ -| .|. ..+|..||.-=+. -++.|.|+.|...
T Consensus 11 ~~~~~~~~C~vC~~~~~~~~-ll-~CD~C~---~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGDEDDK-LL-FCDGCD---DNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCSSSCCSGGGGG-CE-ECTTTC---CEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hhccCCCCCccCCCcCCCCC-EE-EcCCCC---chhccccCCCCcccCCCCCcCCccCcCc
Confidence 33456678999987654322 22 22 233 5799999852121 2468999999764
No 89
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=68.68 E-value=0.29 Score=35.03 Aligned_cols=48 Identities=23% Similarity=0.550 Sum_probs=29.9
Q ss_pred cCCCCeeeEeccCCCCCCeeec--ccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 196 AEEEAVCRICLDICEEGNTLKM--ECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~--PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+++...| ||..... | .++. -|.|.. .++|..|+. |.. .+.+.|+.|..
T Consensus 7 ~~e~~~C-~C~~~~~-g-~mi~CD~cdC~~--~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 7 PNEPTYC-LCHQVSY-G-EMIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp --CCEET-TTTEECC-S-EEEECSCTTCSS--CEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCEE-ECCCcCC-C-CEEEeCCCCCCC--ceEehhcCC--CCcCCCCCEECcCccC
Confidence 4566777 8976543 3 3442 344542 589999987 443 36789998864
No 90
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=68.57 E-value=3.1 Score=34.90 Aligned_cols=47 Identities=21% Similarity=0.548 Sum_probs=31.8
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH---------hcCCCcccCCCc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS---------TKGNKNCEVCGK 250 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~---------~kg~~~CEICK~ 250 (285)
..+..|++|.++ |+.+.-- .|. +.||..||..=+. ..+.|.|.+|..
T Consensus 61 g~~d~C~vC~~G---G~LlcCD-~Cp---r~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 61 GMDEQCRWCAEG---GNLICCD-FCH---NAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCBCSCSSSCCC---SSEEECS-SSC---CEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCeecccCCC---CcEEeCC-CCC---CeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 456789999875 3322211 232 6799999996552 357899999974
No 91
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=67.64 E-value=4.3 Score=33.57 Aligned_cols=49 Identities=24% Similarity=0.485 Sum_probs=32.1
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHH------HH---hcCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRW------FS---TKGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kW------l~---~kg~~~CEICK~e 251 (285)
+..+..|+||.++ |+ |+ - |.+--+.+|..||..= -. ..+.|.|.+|...
T Consensus 54 Dg~~~~C~vC~dG---G~-Ll-c--Cd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCAEG---GN-LI-C--CDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTCCC---SE-EE-E--CSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecCCC---Ce-eE-e--cCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 3455679999864 22 33 1 2233378999999974 23 3578999999543
No 92
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=62.57 E-value=2.6 Score=33.77 Aligned_cols=45 Identities=18% Similarity=0.444 Sum_probs=32.8
Q ss_pred CCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHhcCCCcccCCCccee
Q 023250 199 EAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQ 253 (285)
Q Consensus 199 ~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~ 253 (285)
.-.|..|+.... -||. |. -||+=..||..-+.. ...|+||++...
T Consensus 28 ~~nCKsCWf~~k---~LV~-C~----dHYLCl~CLtlmL~~--SdrCpIC~~pLP 72 (99)
T 2ko5_A 28 PQFCKSCWFENK---GLVE-CN----NHYLCLNCLTLLLSV--SNRCPICKMPLP 72 (99)
T ss_dssp CCCCCSSCSCCS---SEEE-CS----SCEEEHHHHHHTCSS--SSEETTTTEECC
T ss_pred cccChhhccccC---Ceee-ec----chhhHHHHHHHHHhh--ccCCcccCCcCC
Confidence 357999987543 2553 33 278889999888766 459999999865
No 93
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=62.13 E-value=0.59 Score=33.31 Aligned_cols=52 Identities=21% Similarity=0.473 Sum_probs=33.3
Q ss_pred cCCCCeeeEeccCCC-CCCeeeccc-ccCCCcceecHHHHHHHHH-----hcCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICE-EGNTLKMEC-SCKGALRLVHEECAIRWFS-----TKGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e-~g~~Li~PC-~CkGSl~~VH~~CL~kWl~-----~kg~~~CEICK~e 251 (285)
+.++..|.||..... .++.|+ -| .|. ..+|..|+.-=+. -.+.|.|..|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll-~Cd~C~---~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMV-ICDKCG---QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEE-ECSSSC---CEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEE-ECCCCC---hHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 457789999997642 223332 22 232 5799999875332 3578999999654
No 94
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=61.11 E-value=4.9 Score=31.62 Aligned_cols=50 Identities=20% Similarity=0.515 Sum_probs=32.6
Q ss_pred CCCCeeeEeccCCCCCCeeecccc-cCCCcceecHHHHHHHHH------------h--cCCCcccCCCcce
Q 023250 197 EEEAVCRICLDICEEGNTLKMECS-CKGALRLVHEECAIRWFS------------T--KGNKNCEVCGKEV 252 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~-CkGSl~~VH~~CL~kWl~------------~--kg~~~CEICK~ey 252 (285)
..+..|-||-. .+.+ .+.||+ |. +.+|..||.+==. . ..-|.|.-|..-.
T Consensus 13 ~~D~~C~VC~~-~t~~--~l~pCRvC~---RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~ 77 (89)
T 1wil_A 13 VNDEMCDVCEV-WTAE--SLFPCRVCT---RVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN 77 (89)
T ss_dssp CCSCCCTTTCC-CCSS--CCSSCSSSS---SCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred CCCcccCcccc-cccc--ceecccccc---ccccHhhcccccccccHHHHHHHHccCCCCCccccccchhh
Confidence 46678999953 2222 367887 53 6899999998511 0 1248999996543
No 95
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=60.74 E-value=0.75 Score=32.86 Aligned_cols=49 Identities=24% Similarity=0.449 Sum_probs=31.0
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~e 251 (285)
+..+..|.||... ++.| -|. +=-..+|..||..=+.. .+.|.|+.|...
T Consensus 6 d~~~~~C~vC~~~---g~ll--~Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKDG---GELL--CCD--TCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCCC---SSCB--CCS--SSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCCC---CCEE--EcC--CCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3467789999753 2322 222 22256999998754332 468999999764
No 96
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=58.47 E-value=4.8 Score=31.63 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=21.5
Q ss_pred CCCeeeEeccCCC-----CCCeeecccccCCCcceecHHHHHH
Q 023250 198 EEAVCRICLDICE-----EGNTLKMECSCKGALRLVHEECAIR 235 (285)
Q Consensus 198 e~~~CRICle~~e-----~g~~Li~PC~CkGSl~~VH~~CL~k 235 (285)
...+|.||+...+ .++.|+.==.|. ..+|..||.-
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~---~~~H~~Cl~~ 43 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCG---NSGHPSCLKF 43 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTC---CEECHHHHTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcC---CCCCCchhcC
Confidence 4578999997642 223454222232 5799999953
No 97
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=57.92 E-value=1.9 Score=34.50 Aligned_cols=46 Identities=26% Similarity=0.469 Sum_probs=28.3
Q ss_pred ccccCCCCeeeEeccCCCCCCeeecccc---cCCCcceecHHHHHHHHHh--cCCCcccCC
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKMECS---CKGALRLVHEECAIRWFST--KGNKNCEVC 248 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~PC~---CkGSl~~VH~~CL~kWl~~--kg~~~CEIC 248 (285)
+...+++.+|.+|.+. |+ ..-|. |. +.+|..||. |.. +|.|.|+-|
T Consensus 9 ~~~~~~~~~C~~C~~~---G~--ll~CD~~~Cp---~~fH~~Cl~--L~~~P~g~W~Cp~c 59 (107)
T 4gne_A 9 EPKQMHEDYCFQCGDG---GE--LVMCDKKDCP---KAYHLLCLN--LTQPPYGKWECPWH 59 (107)
T ss_dssp -CCCSSCSSCTTTCCC---SE--EEECCSTTCC---CEECTGGGT--CSSCCSSCCCCGGG
T ss_pred CCcCCCCCCCCcCCCC---Cc--EeEECCCCCC---cccccccCc--CCcCCCCCEECCCC
Confidence 3345677889999742 32 33465 54 589999997 433 356666643
No 98
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=57.69 E-value=2.2 Score=33.18 Aligned_cols=50 Identities=20% Similarity=0.309 Sum_probs=28.9
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH-hcCCCcccCCCcc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS-TKGNKNCEVCGKE 251 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~-~kg~~~CEICK~e 251 (285)
++...| ||....+.+ .++.==.|. .++|..|+.-=.. ....+.|+.|+..
T Consensus 26 ~d~vrC-iC~~~~~~~-~mi~Cd~C~---~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 26 TDVTRC-ICGFTHDDG-YMICCDKCS---VWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCBCCC-TTSCCSCSS-CEEEBTTTC---BEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCCEEe-ECCCccCCC-cEEEcCCCC---CcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 344557 786655444 344322343 6999999742111 1246899999743
No 99
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=57.23 E-value=8 Score=31.04 Aligned_cols=36 Identities=25% Similarity=0.496 Sum_probs=29.9
Q ss_pred ecccccCCCcceecHHHHHHHHHhcCCCcccCCCcceecccc
Q 023250 216 KMECSCKGALRLVHEECAIRWFSTKGNKNCEVCGKEVQNLPV 257 (285)
Q Consensus 216 i~PC~CkGSl~~VH~~CL~kWl~~kg~~~CEICK~ey~~vpv 257 (285)
..||+ |.+=.+|+..|-+.+ ...|+.|+..+..|-.
T Consensus 17 mIPCk-----HvFCydCa~~~~~~~-~k~Cp~C~~~V~rVe~ 52 (101)
T 3vk6_A 17 MIPCK-----HVFCYDCAILHEKKG-DKMCPGCSDPVQRIEQ 52 (101)
T ss_dssp EETTC-----CEEEHHHHHHHHHTT-CCBCTTTCCBCSEEEE
T ss_pred ecccc-----ccHHHHHHHHHHhcc-CCCCcCcCCeeeeeEE
Confidence 57998 678899999998764 5799999999987764
No 100
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=50.61 E-value=3.2 Score=32.30 Aligned_cols=49 Identities=18% Similarity=0.533 Sum_probs=32.2
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~e 251 (285)
++....|.+|... |+.|. |.+=-+.+|..||..=+.. .+.|.|+.|...
T Consensus 22 d~n~~~C~vC~~~---g~LL~----CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP---GDLVM----CNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS---SCCEE----CTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC---CCEEE----CCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 4566789999864 23222 2233368999998553332 468999999864
No 101
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.24 E-value=2.4 Score=31.28 Aligned_cols=50 Identities=22% Similarity=0.502 Sum_probs=31.2
Q ss_pred cCCCCeeeEeccCCCCCCeee--cccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 196 AEEEAVCRICLDICEEGNTLK--MECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li--~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
+++...| ||.... .| .+| --|.|.. .+||..|+. |.. .+.+.|+.|....
T Consensus 3 ~~~~~yC-~C~~~~-~g-~MI~CD~cdC~~--~WfH~~Cvg--l~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 3 SGSSGYC-ICNQVS-YG-EMVGCDNQDCPI--EWFHYGCVG--LTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CSCCCCS-TTSCCC-CS-SEECCSCTTCSC--CCEEHHHHT--CSSCCSSCCCCHHHHHHH
T ss_pred CCCCeEE-EcCCCC-CC-CEeEeCCCCCCc--cCCcccccc--cCcCCCCCEECCCCCccc
Confidence 3566677 476653 33 344 3455643 589999986 322 3578999997653
No 102
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=48.36 E-value=4.3 Score=31.96 Aligned_cols=51 Identities=20% Similarity=0.414 Sum_probs=34.0
Q ss_pred CeeeEeccCCCCCCeeeccc-ccCCCcceecHHHHH----HHHH----hcCCCcccCCCccee
Q 023250 200 AVCRICLDICEEGNTLKMEC-SCKGALRLVHEECAI----RWFS----TKGNKNCEVCGKEVQ 253 (285)
Q Consensus 200 ~~CRICle~~e~g~~Li~PC-~CkGSl~~VH~~CL~----kWl~----~kg~~~CEICK~ey~ 253 (285)
..|.||...+.+++.++.=| .|. .+||..|+. ..-. ....+.|+.|...-.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~---~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQ---KWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTC---CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcc---cccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 47999998865544566555 686 699999973 1111 114689999987643
No 103
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=47.92 E-value=3.7 Score=32.40 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=20.8
Q ss_pred CeeeEeccCCC------CCCeeecccccCCCcceecHHHHHHHH
Q 023250 200 AVCRICLDICE------EGNTLKMECSCKGALRLVHEECAIRWF 237 (285)
Q Consensus 200 ~~CRICle~~e------~g~~Li~PC~CkGSl~~VH~~CL~kWl 237 (285)
..|.||+.... +++.|+.==.|. ..+|..||.-+.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~---~~~H~~Cl~~~~ 42 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCG---RSGHPTCLQFTL 42 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSC---CEECTTTTTCCH
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCC---CccchhhCCChh
Confidence 57999987642 123344211233 579999997653
No 104
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=46.33 E-value=2.8 Score=33.01 Aligned_cols=47 Identities=28% Similarity=0.542 Sum_probs=28.7
Q ss_pred eeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 201 VCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 201 ~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+|.||....++++.|+.==.|. +.+|..||..=+.. ++.|.|+.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~---~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCD---RGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTC---CEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCC---CeeecccCCCCCCCCCCCCeECCCCCC
Confidence 6888876533323333211233 67999998644433 46799999974
No 105
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=45.79 E-value=15 Score=26.65 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=33.0
Q ss_pred ccccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH-------hcCCCcccCCCcce
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS-------TKGNKNCEVCGKEV 252 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~-------~kg~~~CEICK~ey 252 (285)
++.++....| ||...++ ++.+|.==.|. .++|..|+.-=.. ....+.|+.|....
T Consensus 10 ~~~d~~~~~C-~C~~~~~-~~~MI~Cd~C~---~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 10 EVYDPNALYC-ICRQPHN-NRFMICCDRCE---EWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CSCCTTCCCS-TTCCCCC-SSCEEECSSSC---CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred cccCCCCCEE-ECCCccC-CCCEEEeCCCC---CcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 3344456778 8877654 33454322354 6999999842111 23578999997654
No 106
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=45.50 E-value=9 Score=27.75 Aligned_cols=34 Identities=24% Similarity=0.633 Sum_probs=21.4
Q ss_pred cCCCCeeeEeccCCCCCCeeeccc--ccCCCcceecHHHH
Q 023250 196 AEEEAVCRICLDICEEGNTLKMEC--SCKGALRLVHEECA 233 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC--~CkGSl~~VH~~CL 233 (285)
++....|-+|...+.++..+| -| .|. .+||..|+
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI-~CD~~C~---~WfH~~Cv 40 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAI-LCEASCQ---KWFHRICT 40 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEE-EBTTTTC---CEEEHHHH
T ss_pred CCCcCcCccCCCccCCCCCeE-ecccCcc---ccCchhcc
Confidence 456778999998876544443 34 344 69999997
No 107
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=43.95 E-value=0.89 Score=32.83 Aligned_cols=48 Identities=23% Similarity=0.566 Sum_probs=29.7
Q ss_pred cCCCCeeeEeccCCCCCCeeec--ccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 196 AEEEAVCRICLDICEEGNTLKM--ECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~--PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+++...| ||..... | .++. -|.|. ..++|..|+. |.. .+.+.|+.|..
T Consensus 8 ~~e~~yC-~C~~~~~-g-~MI~CD~c~C~--~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 8 PNEPTYC-LCNQVSY-G-EMIGCDNEQCP--IEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp --CCEET-TTTEECC-S-EEEECSCTTCS--SCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCCCcEE-ECCCCCC-C-CeeeeeCCCCC--cccEecccCC--cCcCCCCCEECcCccc
Confidence 4566777 8876533 3 3442 34465 2589999987 332 35789998864
No 108
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=43.12 E-value=22 Score=26.15 Aligned_cols=53 Identities=23% Similarity=0.445 Sum_probs=31.5
Q ss_pred ccccCCCCeeeEeccCCCCCCeeecccc---cCCCcceecHHHHHHHHHh-------cCCCcccCCCcc
Q 023250 193 EEIAEEEAVCRICLDICEEGNTLKMECS---CKGALRLVHEECAIRWFST-------KGNKNCEVCGKE 251 (285)
Q Consensus 193 ee~~ee~~~CRICle~~e~g~~Li~PC~---CkGSl~~VH~~CL~kWl~~-------kg~~~CEICK~e 251 (285)
+..+++...| ||....+.+ .+| -|. |. .++|..|+.-=-.. -..+.|+.|+..
T Consensus 10 ~~~~~~~~~C-iC~~~~~~g-~MI-~CD~~~C~---~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 10 PFQPEIKVRC-VCGNSLETD-SMI-QCEDPRCH---VWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SSSCCCCCCC-SSCCCCCCS-CEE-ECSSTTTC---CEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred ccCCCCCEEe-ECCCcCCCC-CEE-EECCccCC---ccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 3344577788 898764433 333 233 54 49999997421111 136899999754
No 109
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.48 E-value=1.4 Score=30.72 Aligned_cols=48 Identities=29% Similarity=0.571 Sum_probs=30.0
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+..+..|.||... ++.+. |. +=-..+|..||..=+.. ++.+.|+.|..
T Consensus 6 ~~~~~~C~vC~~~---g~ll~--Cd--~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLM--CD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEE--CS--SSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC---CeEEE--cC--CCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 4567789999864 23222 22 22268999998743322 36788988853
No 110
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=40.75 E-value=2.3 Score=31.24 Aligned_cols=46 Identities=20% Similarity=0.445 Sum_probs=27.3
Q ss_pred eeeEeccCCCCCCeeecccc-cCCCcceecHHHHHHHHHh--cC-CCcccCCCcc
Q 023250 201 VCRICLDICEEGNTLKMECS-CKGALRLVHEECAIRWFST--KG-NKNCEVCGKE 251 (285)
Q Consensus 201 ~CRICle~~e~g~~Li~PC~-CkGSl~~VH~~CL~kWl~~--kg-~~~CEICK~e 251 (285)
.|.||....+.++ |+ -|. |. +.+|..||.-=+.. ++ .+.|+.|..+
T Consensus 20 ~C~~C~~~~~~~~-ll-~CD~C~---~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDK-QL-MCDECD---MAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGG-EE-ECTTTC---CEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCC-EE-EcCCCC---CceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 5667765443333 32 333 43 57999998632222 36 8899999754
No 111
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=40.58 E-value=2.4 Score=30.55 Aligned_cols=48 Identities=27% Similarity=0.585 Sum_probs=30.7
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
+..+..|.||... ++.|. | .+=-..+|..||..=+.. .+.|.|+.|..
T Consensus 5 ~~~~~~C~vC~~~---g~ll~--C--D~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 5 QKNEDECAVCRDG---GELIC--C--DGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CSCCCSBSSSSCC---SSCEE--C--SSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCccCCCC---CCEEE--c--CCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 3567789999864 33222 2 122257999998743322 46899999964
No 112
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=38.24 E-value=10 Score=26.61 Aligned_cols=53 Identities=13% Similarity=0.261 Sum_probs=33.9
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh---cCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST---KGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~---kg~~~CEICK~e 251 (285)
+++...|.||...++++..+|.==.|. .++|..|+.--... -..+.|+.|...
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCE---MWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSC---CEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCC---CCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 467788999988765444455311343 79999997533221 146889999654
No 113
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=37.27 E-value=1.3 Score=31.65 Aligned_cols=47 Identities=26% Similarity=0.540 Sum_probs=29.5
Q ss_pred CCCCeeeEeccCCCCCCeee--cccccCCCcceecHHHHHHHHHh--cCCCcccCCCc
Q 023250 197 EEEAVCRICLDICEEGNTLK--MECSCKGALRLVHEECAIRWFST--KGNKNCEVCGK 250 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li--~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ 250 (285)
++...| ||..... | .++ --|.|.. .++|..|+. |.. .+.+.|+.|..
T Consensus 7 ~e~~yC-~C~~~~~-g-~mi~CD~~~C~~--~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVSY-G-EMIGCDNPDCPI--EWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEECC-S-EEEECSCTTCSS--CEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCcEE-ECCCCCC-C-CeeEeeCCCCCC--CCEecccCC--cccCCCCCEECcCccC
Confidence 456677 8876543 3 344 2344642 489999987 433 36789998864
No 114
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.41 E-value=4 Score=30.57 Aligned_cols=45 Identities=24% Similarity=0.478 Sum_probs=28.3
Q ss_pred eeeEeccCCCCCCeeeccc-ccCCCcceecHHHHHHHHHh--cC-CCcccCCCc
Q 023250 201 VCRICLDICEEGNTLKMEC-SCKGALRLVHEECAIRWFST--KG-NKNCEVCGK 250 (285)
Q Consensus 201 ~CRICle~~e~g~~Li~PC-~CkGSl~~VH~~CL~kWl~~--kg-~~~CEICK~ 250 (285)
.|.||....+.++.|. | .|. ..+|..||.-=|.. ++ .+.|+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~--CD~C~---~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLL--CDECN---VAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEE--CSSSC---CEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEE--cCCCC---ccccccccCCCccCCCCCCCcCCcCccC
Confidence 7889986554444332 2 233 57899998632222 45 789999964
No 115
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=35.54 E-value=6.6 Score=35.33 Aligned_cols=49 Identities=18% Similarity=0.350 Sum_probs=26.4
Q ss_pred CCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cC-CCcccCCCcc
Q 023250 199 EAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KG-NKNCEVCGKE 251 (285)
Q Consensus 199 ~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg-~~~CEICK~e 251 (285)
...|.+|....+.++.| -|. +=-..+|..||.-=+.. ++ .+.|+.|...
T Consensus 174 ~c~C~vC~~~~~~~~lL--~CD--~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQL--MCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TTSCSSSCCCCC--CCE--ECS--SSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCCcCCCCCCCCCCeE--EcC--CCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 34788887654443332 222 22257999998732222 46 7999999753
No 116
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=34.20 E-value=2.9 Score=29.40 Aligned_cols=48 Identities=29% Similarity=0.562 Sum_probs=30.3
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKE 251 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~e 251 (285)
..+..|.||... ++.+. |. +=-..+|..||..=+.. .+.+.|+.|...
T Consensus 3 ~~~~~C~vC~~~---g~ll~--Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS---GQLLM--CD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC---SSCEE--CS--SSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCC---CcEEE--cC--CCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 356789999764 33222 22 22368999998743322 467899999654
No 117
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=33.81 E-value=5.6 Score=39.15 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=32.2
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh---cCCCcccCCCcce
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST---KGNKNCEVCGKEV 252 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~---kg~~~CEICK~ey 252 (285)
.+...| ||...++.+..++.=..|. .++|..|+.-=-.. -+.+.|+.|....
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICK---DWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTC---CEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCC---CceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 444555 8876655445566544565 69999998421111 1358999998653
No 118
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=31.45 E-value=5.8 Score=33.97 Aligned_cols=47 Identities=21% Similarity=0.557 Sum_probs=30.2
Q ss_pred CCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCCCcccCCCcce
Q 023250 199 EAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGNKNCEVCGKEV 252 (285)
Q Consensus 199 ~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~~~CEICK~ey 252 (285)
+..|.+|..+ |+ | +-| .+=-+.+|..||..=+.. .|.|.|+.|...-
T Consensus 2 ~~~C~~C~~~---g~-l-l~C--d~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP---GD-L-VMC--NQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC---SS-C-CCC--TTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC---Cc-e-eEC--CCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4679999854 23 2 223 233367999998543322 4789999998763
No 119
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=29.42 E-value=14 Score=26.75 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=31.3
Q ss_pred cCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHH--hcCCCcccCCCcc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFS--TKGNKNCEVCGKE 251 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~--~kg~~~CEICK~e 251 (285)
+++...| ||....++++.+|.==.| ..++|..|+.-=.. ....+.|+.|...
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C---~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGC---GVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSS---CEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCC---CCccCCeeeccCccccCCCcEECCCccCC
Confidence 3455678 787765555445532234 37999999752211 1246889998754
No 120
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=28.34 E-value=76 Score=30.43 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=26.7
Q ss_pred CCeeecccccCCCcceecHHHHH--HHHH---hcCCCcccCCCcceec
Q 023250 212 GNTLKMECSCKGALRLVHEECAI--RWFS---TKGNKNCEVCGKEVQN 254 (285)
Q Consensus 212 g~~Li~PC~CkGSl~~VH~~CL~--kWl~---~kg~~~CEICK~ey~~ 254 (285)
...+..||+-. ..-|.+|++ .||. .++.|.|+||...+..
T Consensus 256 ~~ri~~PvRg~---~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 256 YTRMKYPSKSI---NCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp SSBCSSEEEET---TCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred cccccccCcCC---cCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 34567787632 456777753 3553 3578999999988753
No 121
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=27.31 E-value=4.6 Score=30.37 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=26.8
Q ss_pred eeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh--cCC-CcccCCCc
Q 023250 201 VCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST--KGN-KNCEVCGK 250 (285)
Q Consensus 201 ~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~--kg~-~~CEICK~ 250 (285)
.|.||....+.+ .++ -|. +=-+.+|..||.-=|.. .+. +.|+.|+.
T Consensus 28 ~C~vC~~~~d~~-~ll-~CD--~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPD-KQL-MCD--ECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGG-GEE-ECT--TTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCc-cee-EeC--CCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 566665544332 232 222 22257999998755543 355 89999975
No 122
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=27.28 E-value=11 Score=25.83 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=27.9
Q ss_pred eeeEeccCCCCCCeeeccc-ccCCCcceecHHHHHHHHH--hcCCCcccCCC
Q 023250 201 VCRICLDICEEGNTLKMEC-SCKGALRLVHEECAIRWFS--TKGNKNCEVCG 249 (285)
Q Consensus 201 ~CRICle~~e~g~~Li~PC-~CkGSl~~VH~~CL~kWl~--~kg~~~CEICK 249 (285)
.|-||...++++..+|.=- .|. .++|..|+.-=.. ....+.|+.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~---~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCD---EWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTC---CEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCC---ccCcccccCCCccccCCCCEECCCCC
Confidence 4667877765555566422 254 6999999753221 12578898885
No 123
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=24.89 E-value=33 Score=24.89 Aligned_cols=51 Identities=18% Similarity=0.249 Sum_probs=30.4
Q ss_pred CCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHHHh---cCCCcccCCCcc
Q 023250 197 EEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWFST---KGNKNCEVCGKE 251 (285)
Q Consensus 197 ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl~~---kg~~~CEICK~e 251 (285)
.+...| ||...++.++.+|.=-.|. .++|..|+.---.. -..+.|+.|...
T Consensus 8 ~~~~yC-iC~~~~~~~~~MI~Cd~C~---~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 8 TVPVYC-VCRLPYDVTRFMIECDACK---DWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCCEET-TTTEECCTTSCEEECTTTC---CEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCeeEE-ECCCcCCCCCCEEEcCCCC---CCEecccccccccccCCCCEEECCCCccc
Confidence 344455 7776554444565433454 69999998532211 146889999765
No 124
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=21.37 E-value=27 Score=25.25 Aligned_cols=53 Identities=17% Similarity=0.360 Sum_probs=31.2
Q ss_pred cccccCCCCeeeEeccCCCCCCeeecccccCCCcceecHHHHHHHH-HhcCCCcccCCC
Q 023250 192 DEEIAEEEAVCRICLDICEEGNTLKMECSCKGALRLVHEECAIRWF-STKGNKNCEVCG 249 (285)
Q Consensus 192 ~ee~~ee~~~CRICle~~e~g~~Li~PC~CkGSl~~VH~~CL~kWl-~~kg~~~CEICK 249 (285)
+.+.+.+...| ||...++ ++.+|.==.|. .++|..|+.-=. ...+.+.|+.|.
T Consensus 12 ~~~~~~~~~~C-iC~~~~~-~~~MIqCd~C~---~WfH~~Cvgi~~~~~~~~~~C~~C~ 65 (68)
T 3o70_A 12 ENLYFQGLVTC-FCMKPFA-GRPMIECNECH---TWIHLSCAKIRKSNVPEVFVCQKCR 65 (68)
T ss_dssp --CTTTTCCCS-TTCCCCT-TCCEEECTTTC---CEEETTTTTCCTTSCCSSCCCHHHH
T ss_pred ccCCCCCceEe-ECCCcCC-CCCEEECCCCC---ccccccccCcCcccCCCcEECCCCC
Confidence 34445677888 9976654 44455432353 699999974211 112467888885
No 125
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=21.16 E-value=24 Score=25.27 Aligned_cols=49 Identities=22% Similarity=0.495 Sum_probs=27.3
Q ss_pred cCCCCeeeEeccCCCCCCeeeccc---ccCCCcceecHHHHHHHHHh------cCCCcccCCCc
Q 023250 196 AEEEAVCRICLDICEEGNTLKMEC---SCKGALRLVHEECAIRWFST------KGNKNCEVCGK 250 (285)
Q Consensus 196 ~ee~~~CRICle~~e~g~~Li~PC---~CkGSl~~VH~~CL~kWl~~------kg~~~CEICK~ 250 (285)
+++...| ||....+.+. +| -| .|. .++|..|+--=-.. -..+.|+.|+.
T Consensus 7 ~e~~v~C-~C~~~~~~g~-mI-~CD~~~C~---~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 7 PEAKVRC-ICSSTMVNDS-MI-QCEDQRCQ---VWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SSCEECC-TTCCCSCCSC-EE-ECSCTTTC---EEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCCEEe-ECCCCcCCCC-EE-EECCCCCC---CeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3444556 7865544443 33 34 475 59999996210000 02578999974
Done!