BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023258
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04835|YM87_YEAST Uncharacterized membrane protein YMR253C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR253C PE=1
SV=1
Length = 414
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 110 SDVFMVQSIPLFETVFMRCTVTLI--LSYLWLRRS--GQPIFGPMHARNLLVLRALVGFL 165
D+ + I + + +R +T I L Y+++ +S FG R LVLR GF
Sbjct: 96 DDIANDRQIKPLQILLVRMVITYIGTLIYMYINKSTISDVPFGKPEVRKWLVLRGCTGFF 155
Query: 166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
+F YS+ L +S A +++F AP + + +ILRE+ E G +S GV+ I R
Sbjct: 156 GVFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEALGSLISLLGVVLIVR 215
Query: 226 RILTTQAVSGGLVKPGEAISLNVRGSD---HMLAVLVGLFSSITGGISYCLIK 275
+ G + ++ S V SD ++A LVGL+ + Y +I+
Sbjct: 216 -----PSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVYIIIR 263
>sp|Q2M3R5|S35G1_HUMAN Solute carrier family 35 member G1 OS=Homo sapiens GN=SLC35G1 PE=2
SV=1
Length = 365
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 105 FMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGF 164
F++ + DV V+ I F VF V L Y R++G GP R L+LR ++G
Sbjct: 88 FVKKVQDVHAVE-ISAFRCVFQMLVVIPCLIY---RKTG--FIGPKGQRIFLILRGVLGS 141
Query: 165 LSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF 224
++ Y+ Q + L+ ATV++F++P+ SI A I L+EK + + GV+ I
Sbjct: 142 TAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIV 201
Query: 225 R 225
R
Sbjct: 202 R 202
>sp|Q8BY79|S35G1_MOUSE Solute carrier family 35 member G1 OS=Mus musculus GN=Slc35g1 PE=2
SV=1
Length = 368
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 105 FMQVISDVFM--VQSIPLFETVFMRCTVTL--ILSYLWLRRSGQPIFGPMHARNLLVLRA 160
F+ ++ +F+ VQ + E RC V + I+ L R++G GP R L LR
Sbjct: 83 FLFSVASLFVKKVQGVHAVEISAFRCVVQMLVIIPCLIYRKTG--FIGPKGQRLFLFLRG 140
Query: 161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGV 220
+ G ++ Y+ Q L+ ATV++F+ P+ SI A I L+EK + + + GV
Sbjct: 141 VFGSSAMILMYYAFQTTSLADATVIAFSCPVFTSIFAWIFLKEKYSLWDAFFTLFAIAGV 200
Query: 221 LFIFRRILTTQAVSGGLVKPGEAISLNVRGS 251
+ I R + + G+ E+ S +++G+
Sbjct: 201 ILIVRPPFIFGSDTSGM---RESYSEHIKGT 228
>sp|Q08980|YP264_YEAST Probable transport protein YPL264C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL264C PE=1 SV=1
Length = 353
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 122 ETVFMRCTVTLILSYLWLRRSGQPI----FGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
+ + +R ++T + +++ + Q + +GP R L+LR ++GF +F +S+ L
Sbjct: 53 QILLVRMSITYCCTLVYMHWNKQSVPDIPWGPAPCRKWLILRGIMGFFGVFGMYFSLMYL 112
Query: 178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGL 237
+S A +++F +P + + ++L E E G +SF GV+ I R + G
Sbjct: 113 SISDAVLITFMSPTLTIFLSFLLLGEPFSKLEALGSLISFSGVVLIIRPTFLFGEQTQGQ 172
Query: 238 VKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD 282
P + I ++A+ V L Y +I+ N +
Sbjct: 173 QSPQDDIVETQNPKLRLIAIGVSLLGVCGLSSVYIIIRYIGNKAH 217
>sp|Q07835|YXXF_BACSU Uncharacterized transporter YxxF OS=Bacillus subtilis (strain 168)
GN=yxxF PE=3 SV=2
Length = 311
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 117 SIPLFETVFMRC-TVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY--- 172
++P FE VF+RC TL L + WL SGQ R++L A GF +F++V+
Sbjct: 37 NLPSFELVFVRCLCATLFLGFCWLA-SGQYKTEKWSKRDVLQTLA-CGFFLVFNWVFLFK 94
Query: 173 SIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQA 232
S + ++ A + AP++ + REKL + + + + F G T
Sbjct: 95 SFEETSVTIAISVYHLAPVLVLLLGSFFYREKLNVISVSSIIICFLG----------TAL 144
Query: 233 VSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSIT 266
+SG G + GS + AVL LF + T
Sbjct: 145 ISG---INGSTSLTQLMGSGIIWAVLAALFYAFT 175
>sp|O34416|YOAV_BACSU Uncharacterized transporter YoaV OS=Bacillus subtilis (strain 168)
GN=yoaV PE=3 SV=1
Length = 292
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 151 HARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEI 210
H ++ +++ L+G + Y +Q + + +VL +T PI ++ + L EK+ + +
Sbjct: 63 HLKSYIIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFSLNEKMNVYKT 122
Query: 211 GGLALSFFGVLFIFRR 226
GL FG+LFIF +
Sbjct: 123 MGLVCGLFGLLFIFGK 138
>sp|Q9ZJZ2|YC34_HELPJ Uncharacterized transporter jhp_1155 OS=Helicobacter pylori (strain
J99) GN=jhp_1155 PE=3 SV=1
Length = 298
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 156 LVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLAL 215
L R +VG L++ +F Y+I+++ L+ AT S API + + ++L+EKLK + + +
Sbjct: 72 LAFRVVVGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPLLLKEKLKRSALISACI 131
Query: 216 SFFGVLFI 223
GV+ I
Sbjct: 132 GLVGVVLI 139
>sp|O25832|Y1234_HELPY Uncharacterized transporter HP_1234 OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=HP_1234 PE=3 SV=1
Length = 298
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 156 LVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLAL 215
L R +VG L++ +F Y+I+++ L+ AT S API + + ++L+EKLK + + +
Sbjct: 72 LAFRVVVGGLAMLAFFYNIEKISLATATAFSQCAPIYTVLLSPLLLKEKLKRSTLISACI 131
Query: 216 SFFGVLFI 223
GV+ I
Sbjct: 132 GIVGVVLI 139
>sp|Q0Q7U7|S35G5_GORGO Solute carrier family 35 member G5 OS=Gorilla gorilla gorilla
GN=SLC35G5 PE=3 SV=1
Length = 338
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E + RC L ++ L L+ G P+ GP R AL+ LS+
Sbjct: 62 YQASNLPSLELLICRCLFHLPIALL-LKLCGDPLLGPPDIRGRACFCALLNVLSIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATVL ++ + +++ + + L + GL S G++ I
Sbjct: 121 AVQVVPTGNAATVLKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIII 172
>sp|Q68XV0|SAM_RICTY S-adenosylmethionine uptake transporter OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=sam PE=3 SV=1
Length = 294
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 121 FETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLS 180
FE F R + I+ ++ G+ H + VLR L+ F + S+ Y + P++
Sbjct: 39 FEVAFFRFLFSSIVLLPFVVYYGKSTLKTRHPV-IHVLRGLLLFFGMTSWTYGLTIAPVT 97
Query: 181 QATVLSFTAPIMASIAARIILREKL 205
ATV+SF+ P+ I A IL E +
Sbjct: 98 TATVISFSIPLFTLILAVFILNENI 122
>sp|Q9ZE70|SAM_RICPR S-adenosylmethionine uptake transporter OS=Rickettsia prowazekii
(strain Madrid E) GN=sam PE=3 SV=1
Length = 294
Score = 35.0 bits (79), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 157 VLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKL 205
VLR L+ F + S+ Y + P++ ATV+SF P+ I A IL E +
Sbjct: 74 VLRGLLLFFGMTSWTYGLTIAPVTTATVVSFAIPLFTLILAVFILNENI 122
>sp|P0C7Q5|S35G4_HUMAN Solute carrier family 35 member G4 OS=Homo sapiens GN=SLC35G4 PE=3
SV=1
Length = 338
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E V RC L ++ L L+ G P+ GP R AL+ L++
Sbjct: 62 YQASNLPSLELVICRCLFHLPIALL-LKLRGDPLLGPPDIRGRTCFCALLNVLNIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATV ++ + ++I + + L + GL S G++ I
Sbjct: 121 AVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIII 172
>sp|Q96KT7|S35G5_HUMAN Solute carrier family 35 member G5 OS=Homo sapiens GN=SLC35G5 PE=2
SV=1
Length = 338
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 117 SIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQR 176
++P E + RC L ++ L L+ G P+ GP R AL+ LS+ ++Q
Sbjct: 66 NLPSLELLICRCLFHLPIALL-LKLRGDPLLGPPDIRGWACFCALLNVLSIGCAYSAVQV 124
Query: 177 LPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF 224
+P ATV ++ + +++ + + L E GL S G++ I
Sbjct: 125 VPAGNAATVRKGSSTVCSAVLTLCLESQGLGGYEWCGLLGSILGLIIIL 173
>sp|Q4UNE6|SAM_RICFE S-adenosylmethionine uptake transporter OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=sam PE=3 SV=1
Length = 294
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 151 HARNLL--------VLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILR 202
H +N L +LR L+ F + S+ Y + P++ ATV+SF+ P+ I A L
Sbjct: 60 HGKNTLKTSRPFVHILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLN 119
Query: 203 EKL 205
E +
Sbjct: 120 ENI 122
>sp|O31540|YETK_BACSU Uncharacterized transporter YetK OS=Bacillus subtilis (strain 168)
GN=yetK PE=3 SV=1
Length = 330
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 108 VISDVFMVQSIPLFETVFMRCTV--TLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFL 165
V+ MV+ IP+F + +R + ++L L+ G P LLV FL
Sbjct: 44 VVVGKLMVERIPVFLSSGLRFLIASVVLLMLLFCIEKGFPALTKKDVFVLLVQSFTGVFL 103
Query: 166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
+Y +Q +++ +L+ T P++ I + +LREK++ + G+ L+ GV+ I
Sbjct: 104 FSICLLYGVQYTTGTESGILTSTTPMLIGILSFFLLREKIEKKTLIGILLAVCGVMAI 161
>sp|Q1RKL2|SAM_RICBR S-adenosylmethionine uptake transporter OS=Rickettsia bellii
(strain RML369-C) GN=sam PE=3 SV=1
Length = 291
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 157 VLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKL 205
+LR L+ F + S+ Y + P++ ATV+SF+ P+ I A L E +
Sbjct: 74 ILRGLLLFFGMTSWTYGLSIAPVTTATVISFSIPLFTLILAVFFLNENI 122
>sp|P0C7Q6|S35G6_HUMAN Solute carrier family 35 member G6 OS=Homo sapiens GN=SLC35G6 PE=1
SV=1
Length = 338
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E + RC L ++ L L+ G P+ GP R AL+ LS+
Sbjct: 62 YQASNLPSLELLICRCLFHLPIALL-LKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATV ++ + +++ + + L + GL S G++ I
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIII 172
>sp|P37511|YYAM_BACSU Uncharacterized transporter YyaM OS=Bacillus subtilis (strain 168)
GN=yyaM PE=3 SV=1
Length = 305
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 160 ALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFG 219
+ GF +LF FV P++ A ++ P++ +I ARIIL++ + ++ G+ +F G
Sbjct: 77 GIFGFNALF-FVGLKYTSPVNGALIMGLN-PLLTAILARIILKDNMTKKQVLGIFFAFIG 134
Query: 220 VLFIFRR----ILTTQAVSGG 236
VL + + + T ++SGG
Sbjct: 135 VLLVITQGSIETIKTLSISGG 155
>sp|Q0Q7U8|S35G5_PANTR Solute carrier family 35 member G5 OS=Pan troglodytes GN=SLC35G5
PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E + RC L ++ L L+ G P+ GP R AL+ LS+
Sbjct: 62 YQASNLPSLELLICRCLFHLPIA-LPLKLHGDPLLGPPDIRGRACFCALLNVLSIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATV ++ + ++I + + L + GL S G++ I
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAILTLCLESQGLSGYDWCGLLGSILGLIII 172
>sp|Q92JG1|SAM_RICCN S-adenosylmethionine uptake transporter OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sam PE=3 SV=1
Length = 294
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 157 VLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKL 205
+LR L+ F + S+ Y + P++ ATV+SF+ P+ I A L E +
Sbjct: 74 ILRGLLLFFGMTSWTYGLTIAPVTTATVVSFSIPLFTLILAVFFLNENI 122
>sp|P29086|YSO2_ACIAM Uncharacterized transporter in sor 3'region OS=Acidianus ambivalens
PE=2 SV=1
Length = 253
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 172 YSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVL 221
Y + + S++ VLS+T P++A + +ILREK E+ G+ + F GV+
Sbjct: 44 YGLLYVEPSESAVLSYTMPLIAIPLSTLILREKTTKTEVIGILIGFSGVV 93
>sp|Q0Q7U9|S35G5_PANPA Solute carrier family 35 member G5 OS=Pan paniscus GN=SLC35G5 PE=3
SV=1
Length = 338
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E + RC L ++ L L+ G P+ GP R AL+ LS+
Sbjct: 62 YQASNLPSLELLICRCLFHLPIA-LPLKLRGDPLLGPPDIRGRACFCALLNVLSIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATV ++ + ++I + + L + GL S G++ I
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAILTLCLESQGLSGYDWCGLLGSILGLIII 172
>sp|P0AAE7|ARCD_SHIFL Putative arginine/ornithine antiporter OS=Shigella flexneri GN=ydgI
PE=3 SV=1
Length = 460
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 44 PLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW-NGSRYSGLMCMALSSTI 102
P LA + K IF+ + P + T+ + C++ +W GS Y+ L+ +A +
Sbjct: 308 PFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMIL 367
Query: 103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
+ V + + + + PL + V V + LWL + GPMH
Sbjct: 368 VPYFLVGAFLLKIATRPLHKAV----GVGACIYGLWLLYAS----GPMH 408
>sp|P0AAE5|ARCD_ECOLI Putative arginine/ornithine antiporter OS=Escherichia coli (strain
K12) GN=ydgI PE=1 SV=1
Length = 460
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 44 PLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW-NGSRYSGLMCMALSSTI 102
P LA + K IF+ + P + T+ + C++ +W GS Y+ L+ +A +
Sbjct: 308 PFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMIL 367
Query: 103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
+ V + + + + PL + V V + LWL + GPMH
Sbjct: 368 VPYFLVGAFLLKIATRPLHKAV----GVGACIYGLWLLYAS----GPMH 408
>sp|P0AAE6|ARCD_ECOL6 Putative arginine/ornithine antiporter OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ydgI PE=3 SV=1
Length = 460
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 44 PLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVW-NGSRYSGLMCMALSSTI 102
P LA + K IF+ + P + T+ + C++ +W GS Y+ L+ +A +
Sbjct: 308 PFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMIL 367
Query: 103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
+ V + + + + PL + V V + LWL + GPMH
Sbjct: 368 VPYFLVGAFLLKIATRPLHKAV----GVGACIYGLWLLYAS----GPMH 408
>sp|Q0Q7V0|S35G3_PANPA Solute carrier family 35 member G3 OS=Pan paniscus GN=SLC35G3 PE=3
SV=1
Length = 338
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ ++P E + RC L ++ L L+ G P+ GP R+ AL+ LS+
Sbjct: 62 YQASNLPSLELLIWRCLFHLPIALL-LKLRGDPLLGPPDIRSRAFFCALLNILSIGCAYS 120
Query: 173 SIQRLPLSQ-ATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P ATV ++ + +++ + + L + GL G++ I
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGCILGLIII 172
>sp|B0K004|S35G3_RAT Solute carrier family 35 member G3 OS=Rattus norvegicus GN=Slc35g3
PE=2 SV=1
Length = 340
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 113 FMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY 172
+ +P E + RC L ++ L L+ G P+ GP R L A++ LS+
Sbjct: 64 YQTSQLPSLELLIFRCLFHLPIA-LILKFRGDPLLGPPDVRVRAFLHAILNVLSIGCAYS 122
Query: 173 SIQRLPLSQA-TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI 223
++Q +P A TV ++ + +++ A + ++L GL S G++ I
Sbjct: 123 AVQVVPAGNAVTVRKGSSTVCSALLALCLESQRLSGYAWCGLFGSTLGLIII 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,246,875
Number of Sequences: 539616
Number of extensions: 3462708
Number of successful extensions: 11862
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 11835
Number of HSP's gapped (non-prelim): 48
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)