BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023260
         (285 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
           GN=At3g12360 PE=2 SV=1
          Length = 590

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 9/141 (6%)

Query: 80  RDLKEKGEKWMKDTASSCMIVATLIATVVFAAALTVPGGNKEDTGLPFFLHNVSFKIFAV 139
           ++L++   + + +  +S  +VA L ATV FAA  TVPGG+  D G    +   SFKIF +
Sbjct: 405 KELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNND-GSAVVVGRASFKIFFI 463

Query: 140 SNVISLVASTLSIVVFLSLVTPRY-AEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATS 198
            N ++L  S   +VV ++LV     AEK  + ++ +        +++A     V F A+S
Sbjct: 464 FNALALFTSLAVVVVQITLVRGETKAEKRVVEVINK-------LMWLASMCTSVAFLASS 516

Query: 199 FIVFTDGSTWIAILVIVVPSV 219
           +IV    + W A LV VV  V
Sbjct: 517 YIVVGRKNEWAAELVTVVGGV 537


>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana
           GN=At2g01680 PE=1 SV=1
          Length = 532

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 19/172 (11%)

Query: 80  RDLKEKGEKWMKDTASSCMIVATLIATVVFAAALTVPGG---NKEDTGLPFFLHNVSFKI 136
           ++L++   + +++T +S  +VA L A++ F A   +PG         G         F++
Sbjct: 337 KELRKLHREAVQNTTNSITVVAVLFASIAFLAIFNLPGQYFTEGSHVGQANIAGRTGFRV 396

Query: 137 FAVSNVISLVASTLSIVVFLSLVT-PRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFS 195
           F + N  SL  S   +VV ++LV     A+K  +S++ + ++      F A       F 
Sbjct: 397 FCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKLMWAACACTFGA-------FL 449

Query: 196 ATSFIVFTDGSTWIAILV------IVVPSVPAILFFYL--HFRLFDDILRSV 239
           A +F V   G++W+AI +      I+V ++ ++ +F     FR  +D  R +
Sbjct: 450 AIAFAVVGKGNSWMAITITLLGAPILVGTLASMCYFVFRQRFRSGNDSQRRI 501


>sp|Q49LS3|XKR5_PANTR XK-related protein 5 OS=Pan troglodytes GN=XKR5 PE=2 SV=1
          Length = 686

 Score = 35.0 bits (79), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 144 SLVASTLSIVVFLSLVTPRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFT 203
           SL  + +S   F+  + P +    + +L  ++L+  +G L   + ++++ + A  F VF 
Sbjct: 152 SLSWALVSYTRFMGFMKPGHLAMPWAALFCQQLWR-MGMLGTRVMSLVLFYKAYHFWVFV 210

Query: 204 -DGSTWIAILVIVVPSVPAILFFYLHFRLFDDILRSVFVSDYL 245
             G+ W+ +   +V     I+    H+RLF+ ++ +V++  YL
Sbjct: 211 VAGAHWLVMTFWLVAQQSDIIDSTCHWRLFNLLVGAVYILCYL 253


>sp|Q6UX68|XKR5_HUMAN XK-related protein 5 OS=Homo sapiens GN=XKR5 PE=2 SV=1
          Length = 686

 Score = 34.7 bits (78), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 144 SLVASTLSIVVFLSLVTPRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFT 203
           SL  + +S   F+  + P +    + +L  ++L+  +G L   + ++++ + A  F VF 
Sbjct: 152 SLSWALVSYTRFMGFMKPGHLAMPWAALFCQQLWR-MGMLGTRVLSLVLFYKAYHFWVFV 210

Query: 204 -DGSTWIAILVIVVPSVPAILFFYLHFRLFDDILRSVFVSDYL 245
             G+ W+ +   +V     I+    H+RLF+ ++ +V++  YL
Sbjct: 211 VAGAHWLVMTFWLVAQQSDIIDSTCHWRLFNLLVGAVYILCYL 253


>sp|Q6RX08|TRPV1_RABIT Transient receptor potential cation channel subfamily V member 1
           OS=Oryctolagus cuniculus GN=Trpv1 PE=1 SV=1
          Length = 842

 Score = 31.2 bits (69), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 9   VDSTDGEGNNILHLAGKLAP--PDRLNVVSGSALQMQRELLWFQAVKKVVPR-KLAEAKN 65
           + + D  GN +LH   ++A   PD    V+     M  E+L   A  K+ P  KL E  N
Sbjct: 280 ISARDSVGNTVLHALVEVADNTPDNTKFVT----SMYNEILILGA--KLHPTLKLEELIN 333

Query: 66  KKGLTPRAL 74
           KKGLTP AL
Sbjct: 334 KKGLTPLAL 342


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.137    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,843,020
Number of Sequences: 539616
Number of extensions: 3754122
Number of successful extensions: 13790
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 13778
Number of HSP's gapped (non-prelim): 43
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)