Query 023260
Match_columns 285
No_of_seqs 218 out of 788
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 02:41:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023260.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023260hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 100.0 3.4E-28 7.3E-33 197.4 10.3 109 87-201 1-113 (113)
2 PF13857 Ank_5: Ankyrin repeat 98.2 2.2E-07 4.7E-12 66.0 -0.8 49 7-74 7-55 (56)
3 KOG0509 Ankyrin repeat and DHH 96.8 0.0012 2.5E-08 67.3 4.0 19 60-78 237-255 (600)
4 KOG0510 Ankyrin repeat protein 96.7 0.00061 1.3E-08 71.2 1.4 73 6-78 263-351 (929)
5 PF13637 Ank_4: Ankyrin repeat 96.3 0.00072 1.6E-08 47.0 -0.6 22 8-29 26-47 (54)
6 KOG0508 Ankyrin repeat protein 96.1 0.0014 3.1E-08 65.1 -0.2 49 9-78 521-571 (615)
7 PHA02741 hypothetical protein; 96.1 0.0028 6.1E-08 54.1 1.6 72 7-78 51-142 (169)
8 KOG4412 26S proteasome regulat 95.9 0.0033 7.1E-08 55.8 1.4 26 8-33 131-156 (226)
9 PHA02946 ankyin-like protein; 95.9 0.0042 9.2E-08 61.5 2.3 22 57-78 231-252 (446)
10 PHA03095 ankyrin-like protein; 95.8 0.0026 5.6E-08 62.0 0.4 19 59-77 281-299 (471)
11 PHA02736 Viral ankyrin protein 95.8 0.0086 1.9E-07 49.9 3.2 58 7-78 8-65 (154)
12 PF13606 Ank_3: Ankyrin repeat 95.7 0.0021 4.6E-08 40.1 -0.5 18 15-32 1-18 (30)
13 PHA02798 ankyrin-like protein; 95.7 0.0028 6.2E-08 62.9 0.1 51 9-78 251-301 (489)
14 PF00023 Ank: Ankyrin repeat H 95.7 0.0021 4.6E-08 40.4 -0.6 18 15-32 1-18 (33)
15 PHA02736 Viral ankyrin protein 95.7 0.0042 9E-08 51.8 0.9 71 8-78 47-136 (154)
16 PHA02946 ankyin-like protein; 95.6 0.0043 9.2E-08 61.5 0.9 24 9-32 65-88 (446)
17 PHA02989 ankyrin repeat protei 95.5 0.0038 8.2E-08 62.1 0.2 51 9-78 249-299 (494)
18 KOG0514 Ankyrin repeat protein 95.5 0.0032 6.9E-08 60.9 -0.3 52 6-75 258-309 (452)
19 KOG0510 Ankyrin repeat protein 95.4 0.0044 9.4E-08 65.0 0.3 25 95-119 511-535 (929)
20 KOG0195 Integrin-linked kinase 95.4 0.0053 1.1E-07 58.0 0.8 19 60-78 125-143 (448)
21 PHA02730 ankyrin-like protein; 95.2 0.0069 1.5E-07 63.1 1.0 48 9-77 33-86 (672)
22 PHA02741 hypothetical protein; 94.9 0.013 2.9E-07 49.9 1.7 60 6-78 11-70 (169)
23 KOG4412 26S proteasome regulat 94.8 0.0087 1.9E-07 53.2 0.4 19 59-77 97-115 (226)
24 PHA02874 ankyrin repeat protei 94.8 0.0095 2.1E-07 58.0 0.5 18 60-77 280-297 (434)
25 PHA02859 ankyrin repeat protei 94.7 0.01 2.2E-07 52.6 0.5 19 8-26 115-133 (209)
26 PHA02743 Viral ankyrin protein 94.7 0.013 2.8E-07 50.1 1.0 70 8-77 49-137 (166)
27 KOG0512 Fetal globin-inducing 94.6 0.012 2.7E-07 51.9 0.7 48 5-73 86-135 (228)
28 PHA02795 ankyrin-like protein; 94.6 0.011 2.4E-07 58.7 0.4 52 8-78 213-264 (437)
29 PHA03100 ankyrin repeat protei 94.5 0.012 2.6E-07 57.5 0.5 52 8-78 242-293 (480)
30 PHA02716 CPXV016; CPX019; EVM0 94.3 0.02 4.2E-07 60.7 1.6 57 9-79 490-546 (764)
31 PF13637 Ank_4: Ankyrin repeat 94.0 0.013 2.8E-07 40.6 -0.4 43 16-77 1-43 (54)
32 PLN03192 Voltage-dependent pot 93.9 0.025 5.5E-07 60.1 1.5 19 60-78 647-665 (823)
33 PLN03192 Voltage-dependent pot 93.6 0.024 5.2E-07 60.2 0.6 49 9-76 551-599 (823)
34 KOG0818 GTPase-activating prot 93.5 0.038 8.2E-07 55.5 1.8 56 10-84 160-217 (669)
35 PHA02743 Viral ankyrin protein 93.5 0.032 7E-07 47.6 1.1 21 9-29 13-33 (166)
36 PTZ00322 6-phosphofructo-2-kin 93.4 0.025 5.4E-07 58.9 0.3 51 9-78 108-158 (664)
37 KOG0505 Myosin phosphatase, re 93.1 0.043 9.4E-07 55.2 1.6 51 9-78 224-274 (527)
38 PHA02878 ankyrin repeat protei 93.1 0.029 6.2E-07 55.4 0.3 69 9-77 160-243 (477)
39 PHA02792 ankyrin-like protein; 92.7 0.039 8.4E-07 57.2 0.6 49 9-76 403-451 (631)
40 KOG0522 Ankyrin repeat protein 92.7 0.035 7.5E-07 55.9 0.2 45 8-73 47-93 (560)
41 PHA02876 ankyrin repeat protei 92.6 0.036 7.8E-07 57.3 0.1 49 9-76 435-484 (682)
42 PF12796 Ank_2: Ankyrin repeat 92.4 0.028 6.1E-07 42.1 -0.7 21 9-29 52-72 (89)
43 KOG0508 Ankyrin repeat protein 92.3 0.04 8.6E-07 55.1 0.0 26 8-33 175-200 (615)
44 PHA02716 CPXV016; CPX019; EVM0 92.3 0.057 1.2E-06 57.2 1.2 49 9-75 205-254 (764)
45 PHA02798 ankyrin-like protein; 92.1 0.064 1.4E-06 53.3 1.3 19 9-27 102-120 (489)
46 PHA03095 ankyrin-like protein; 91.8 0.053 1.1E-06 52.8 0.3 20 9-28 76-95 (471)
47 PHA02791 ankyrin-like protein; 91.8 0.068 1.5E-06 50.1 1.0 68 10-77 24-103 (284)
48 PHA02874 ankyrin repeat protei 91.8 0.055 1.2E-06 52.7 0.3 22 9-30 117-138 (434)
49 PHA02876 ankyrin repeat protei 91.7 0.059 1.3E-06 55.7 0.5 25 9-33 171-195 (682)
50 KOG0514 Ankyrin repeat protein 91.5 0.056 1.2E-06 52.5 0.1 56 8-81 365-421 (452)
51 PHA02884 ankyrin repeat protei 91.3 0.066 1.4E-06 50.8 0.3 65 13-77 67-146 (300)
52 KOG0505 Myosin phosphatase, re 91.2 0.09 2E-06 53.0 1.1 51 7-78 97-149 (527)
53 PHA02791 ankyrin-like protein; 91.1 0.072 1.6E-06 49.9 0.4 21 10-30 88-108 (284)
54 PF13857 Ank_5: Ankyrin repeat 91.0 0.088 1.9E-06 36.9 0.7 16 8-23 41-56 (56)
55 PHA02875 ankyrin repeat protei 90.9 0.075 1.6E-06 51.1 0.3 69 10-78 96-178 (413)
56 PHA02878 ankyrin repeat protei 90.7 0.092 2E-06 51.9 0.7 18 60-77 193-210 (477)
57 TIGR00870 trp transient-recept 90.6 0.12 2.7E-06 54.0 1.6 66 9-78 201-267 (743)
58 COG0666 Arp FOG: Ankyrin repea 90.6 0.15 3.3E-06 42.6 1.9 57 10-77 100-156 (235)
59 KOG3676 Ca2+-permeable cation 90.5 0.068 1.5E-06 56.2 -0.4 55 8-79 265-319 (782)
60 PHA02730 ankyrin-like protein; 90.2 0.11 2.3E-06 54.4 0.8 49 9-76 455-504 (672)
61 PHA02917 ankyrin-like protein; 90.1 0.12 2.5E-06 54.1 0.9 50 9-77 445-494 (661)
62 PHA02859 ankyrin repeat protei 90.1 0.12 2.6E-06 45.7 0.8 20 8-27 78-98 (209)
63 COG0666 Arp FOG: Ankyrin repea 89.4 0.16 3.4E-06 42.6 1.0 52 8-78 139-190 (235)
64 PHA02875 ankyrin repeat protei 88.8 0.14 3E-06 49.3 0.2 70 9-78 61-145 (413)
65 PHA02917 ankyrin-like protein; 88.7 0.14 3.1E-06 53.4 0.4 20 9-28 25-44 (661)
66 PF12796 Ank_2: Ankyrin repeat 87.4 0.16 3.5E-06 37.9 -0.2 44 16-78 26-69 (89)
67 KOG0705 GTPase-activating prot 87.2 0.26 5.7E-06 50.4 1.1 52 2-72 647-698 (749)
68 KOG4177 Ankyrin [Cell wall/mem 86.0 0.26 5.7E-06 54.2 0.4 20 9-28 566-585 (1143)
69 PHA02792 ankyrin-like protein; 86.0 0.23 5E-06 51.6 -0.0 22 7-28 166-187 (631)
70 PHA03100 ankyrin repeat protei 85.7 0.25 5.4E-06 48.3 0.1 23 9-31 99-123 (480)
71 cd00204 ANK ankyrin repeats; 85.2 1 2.2E-05 34.0 3.4 20 10-29 1-20 (126)
72 PHA02884 ankyrin repeat protei 85.0 0.38 8.3E-06 45.6 1.0 26 9-34 25-51 (300)
73 PHA02989 ankyrin repeat protei 84.9 0.54 1.2E-05 46.8 2.0 19 9-27 101-119 (494)
74 KOG0509 Ankyrin repeat and DHH 84.7 0.4 8.6E-06 49.3 1.0 22 9-30 138-159 (600)
75 KOG4177 Ankyrin [Cell wall/mem 83.5 0.5 1.1E-05 52.1 1.2 65 9-77 533-615 (1143)
76 KOG4214 Myotrophin and similar 78.4 0.5 1.1E-05 38.0 -0.7 17 15-31 33-49 (117)
77 KOG0195 Integrin-linked kinase 75.9 0.86 1.9E-05 43.4 -0.0 14 60-73 92-105 (448)
78 smart00248 ANK ankyrin repeats 75.2 0.76 1.6E-05 25.1 -0.4 16 15-30 1-16 (30)
79 PHA02795 ankyrin-like protein; 73.9 1.7 3.6E-05 43.5 1.4 21 8-28 246-266 (437)
80 KOG0515 p53-interacting protei 71.9 1.7 3.7E-05 44.4 1.0 21 8-28 608-628 (752)
81 KOG0521 Putative GTPase activa 71.3 2.8 6.2E-05 44.8 2.5 48 9-75 682-729 (785)
82 TIGR00870 trp transient-recept 70.3 2.6 5.7E-05 44.2 2.0 22 7-28 43-65 (743)
83 KOG0507 CASK-interacting adapt 67.8 1.8 3.9E-05 45.8 0.1 15 61-75 141-155 (854)
84 KOG0782 Predicted diacylglycer 64.5 1.8 4E-05 44.5 -0.5 18 61-78 960-977 (1004)
85 PTZ00322 6-phosphofructo-2-kin 63.0 2.4 5.1E-05 44.4 -0.1 24 9-32 141-164 (664)
86 PF06570 DUF1129: Protein of u 61.6 78 0.0017 28.0 9.5 11 66-76 43-53 (206)
87 cd00204 ANK ankyrin repeats; 58.1 3.2 6.9E-05 31.2 -0.1 21 10-30 34-54 (126)
88 KOG0512 Fetal globin-inducing 57.8 6 0.00013 35.3 1.5 22 10-31 124-145 (228)
89 KOG0502 Integral membrane anky 50.9 9.8 0.00021 35.2 1.8 70 6-75 150-233 (296)
90 KOG3676 Ca2+-permeable cation 50.7 62 0.0013 34.7 7.8 25 8-32 300-324 (782)
91 KOG0506 Glutaminase (contains 50.2 5.4 0.00012 40.4 0.1 48 9-74 532-579 (622)
92 KOG0783 Uncharacterized conser 48.9 5.2 0.00011 43.1 -0.3 23 8-30 44-66 (1267)
93 KOG4214 Myotrophin and similar 45.7 5.7 0.00012 32.1 -0.5 48 9-77 60-109 (117)
94 KOG2505 Ankyrin repeat protein 42.1 8.1 0.00018 39.3 -0.1 43 16-77 430-472 (591)
95 KOG0507 CASK-interacting adapt 41.8 9.4 0.0002 40.6 0.3 25 7-31 40-64 (854)
96 KOG0520 Uncharacterized conser 41.2 12 0.00025 41.0 0.9 22 9-30 634-655 (975)
97 PF12304 BCLP: Beta-casein lik 39.2 66 0.0014 28.7 5.1 31 134-164 37-68 (188)
98 KOG0502 Integral membrane anky 33.9 14 0.00031 34.1 0.2 52 5-77 215-268 (296)
99 KOG2384 Major histocompatibili 33.2 22 0.00047 32.2 1.1 53 8-78 4-56 (223)
100 KOG2927 Membrane component of 31.6 93 0.002 30.5 5.2 52 190-241 198-251 (372)
101 KOG0515 p53-interacting protei 31.0 19 0.00041 37.1 0.5 48 11-77 578-625 (752)
102 PF05313 Pox_P21: Poxvirus P21 30.2 4E+02 0.0087 23.8 9.2 33 176-208 84-116 (189)
103 KOG0522 Ankyrin repeat protein 29.5 26 0.00056 35.9 1.1 21 10-30 82-102 (560)
104 KOG1710 MYND Zn-finger and ank 24.7 24 0.00052 33.9 -0.1 22 9-30 38-59 (396)
105 COG4298 Uncharacterized protei 23.6 1.6E+02 0.0034 23.2 4.2 19 136-154 15-33 (95)
106 PF11023 DUF2614: Protein of u 23.5 2.5E+02 0.0053 23.1 5.5 17 177-193 13-29 (114)
107 PF12273 RCR: Chitin synthesis 21.4 86 0.0019 25.7 2.7 11 207-217 1-11 (130)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.95 E-value=3.4e-28 Score=197.41 Aligned_cols=109 Identities=41% Similarity=0.682 Sum_probs=97.5
Q ss_pred hHHhhhccccchHHHHHHHHHHHHhhhcCCCCCCCC---CCccccccCc-ceeeehhhhHHHHHHHHHHHHHHhhhcCcc
Q 023260 87 EKWMKDTASSCMIVATLIATVVFAAALTVPGGNKED---TGLPFFLHNV-SFKIFAVSNVISLVASTLSIVVFLSLVTPR 162 (285)
Q Consensus 87 ~~~~~~~~~sllvVA~LIATVtFaA~ft~PGG~~~~---~G~p~l~~~~-~F~~F~i~ntiAf~~S~~aill~lsil~sr 162 (285)
+||++|++|+++|||+||||||||||+|||||+||| +|+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 579999999999999999999999999999999875 6999998887 999999999999999999999887422
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023260 163 YAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIV 201 (285)
Q Consensus 163 ~~~~df~~~l~~~l~~~~~~l~~si~~m~vAF~~g~~~v 201 (285)
+++.+..++.+..+..++++++.+|++||++|+|+|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 344555667788889999999999999999999875
No 2
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.19 E-value=2.2e-07 Score=66.00 Aligned_cols=49 Identities=29% Similarity=0.361 Sum_probs=25.0
Q ss_pred hhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCcccc
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~di 74 (285)
..+|.+|.+|+||||+|++.++.+.+..+ . -++.....+|++|+||.|+
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~L-----------l--------~~g~d~~~~d~~G~Tpl~~ 55 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLL-----------L--------QNGADPNAKDKDGQTPLHY 55 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHH-----------H--------HCT--TT---TTS--HHHH
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHH-----------H--------HCcCCCCCCcCCCCCHHHh
Confidence 46799999999999999999875443221 1 1345689999999999875
No 3
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=96.79 E-value=0.0012 Score=67.29 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=16.4
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
+.+..|.+|+||.|+.+++
T Consensus 237 ~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 237 DLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cccccccCCCCHHHHHHHh
Confidence 5788899999999999775
No 4
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.71 E-value=0.00061 Score=71.17 Aligned_cols=73 Identities=22% Similarity=0.407 Sum_probs=44.6
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccc--cchh-----------HHHHHHHHHHhhhhhhcC---cchhhcccCCCC
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSA-----------LQMQRELLWFQAVKKVVP---RKLAEAKNKKGL 69 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaa-----------lqm~~el~w~k~v~~~~~---~~~~~~~N~dG~ 69 (285)
..++|+.|+||+||||+|++.|.+..++.+ -|+. +...-.---+..|+.... -......|..|.
T Consensus 263 kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~ 342 (929)
T KOG0510|consen 263 KELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGM 342 (929)
T ss_pred HHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCC
Confidence 357899999999999999999998766543 1111 111111111122333333 123566677899
Q ss_pred Cccccchhh
Q 023260 70 TPRALFSEQ 78 (285)
Q Consensus 70 Tp~dif~~~ 78 (285)
||..+...+
T Consensus 343 tpLHlaa~~ 351 (929)
T KOG0510|consen 343 TPLHLAAKS 351 (929)
T ss_pred Cchhhhhhc
Confidence 999987654
No 5
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=96.35 E-value=0.00072 Score=47.00 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=15.1
Q ss_pred hhccccCCCCchhhhhhhcCCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAPP 29 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~ 29 (285)
-+|.+|.+|+||||.|++.++.
T Consensus 26 din~~d~~g~t~lh~A~~~g~~ 47 (54)
T PF13637_consen 26 DINAQDEDGRTPLHYAAKNGNI 47 (54)
T ss_dssp GTT-B-TTS--HHHHHHHTT-H
T ss_pred CCCCCCCCCCCHHHHHHHccCH
Confidence 3799999999999999999864
No 6
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.09 E-value=0.0014 Score=65.09 Aligned_cols=49 Identities=29% Similarity=0.398 Sum_probs=37.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
.|.+|++||||||+|++...+..++.+ .|+ ..+..|..|+|+.|+..+.
T Consensus 521 vna~D~~~ntplHIa~~~~~~si~~aLie~Ga---------------------h~datN~~~~t~~~ll~~~ 571 (615)
T KOG0508|consen 521 VNARDFDNNTPLHIAAQNNCPSIVNALIEAGA---------------------HLDATNAHKKTALDLLDEK 571 (615)
T ss_pred CCcccCCCCchhHHHHHhccHHHHHHHHHccc---------------------chhhhhhccccHHHHhchh
Confidence 689999999999999998554443322 232 4788999999999987653
No 7
>PHA02741 hypothetical protein; Provisional
Probab=96.07 E-value=0.0028 Score=54.07 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=44.8
Q ss_pred hhhccccCCCCchhhhhhhcCCCC----cc----------ccc---cch-hHHHHHHHHHHhhhhhhc--CcchhhcccC
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPD----RL----------NVV---SGS-ALQMQRELLWFQAVKKVV--PRKLAEAKNK 66 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~----~l----------~~~---~ga-alqm~~el~w~k~v~~~~--~~~~~~~~N~ 66 (285)
..+|.+|.+|+||||+|+..++.. .+ +.. .|. +|.....-...+-|+.++ +....+.+|.
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 347999999999999999988631 11 110 111 343332222334455444 3456788899
Q ss_pred CCCCccccchhh
Q 023260 67 KGLTPRALFSEQ 78 (285)
Q Consensus 67 dG~Tp~dif~~~ 78 (285)
+|.||.++....
T Consensus 131 ~g~tpL~~A~~~ 142 (169)
T PHA02741 131 DNKSPFELAIDN 142 (169)
T ss_pred CCCCHHHHHHHC
Confidence 999999887654
No 8
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=95.94 E-value=0.0033 Score=55.80 Aligned_cols=26 Identities=23% Similarity=0.354 Sum_probs=15.9
Q ss_pred hhccccCCCCchhhhhhhcCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLN 33 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~ 33 (285)
.++.+|+.|.||||-||..|..+...
T Consensus 131 ~i~~kD~~~qtplHRAAavGklkvie 156 (226)
T KOG4412|consen 131 LIRIKDKQGQTPLHRAAAVGKLKVIE 156 (226)
T ss_pred CCcccccccCchhHHHHhccchhhHH
Confidence 35666666666666666666554433
No 9
>PHA02946 ankyin-like protein; Provisional
Probab=95.93 E-value=0.0042 Score=61.49 Aligned_cols=22 Identities=27% Similarity=0.377 Sum_probs=17.0
Q ss_pred CcchhhcccCCCCCccccchhh
Q 023260 57 PRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 57 ~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+....+.+|++|.||..+..+.
T Consensus 231 ~gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 231 PSTDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred cCCCCCCCCCCCCCHHHHHHHh
Confidence 3456888999999999876554
No 10
>PHA03095 ankyrin-like protein; Provisional
Probab=95.84 E-value=0.0026 Score=61.96 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=15.0
Q ss_pred chhhcccCCCCCccccchh
Q 023260 59 KLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 59 ~~~~~~N~dG~Tp~dif~~ 77 (285)
......|++|.||.++...
T Consensus 281 ad~n~~~~~g~tpl~~A~~ 299 (471)
T PHA03095 281 ADINAVSSDGNTPLSLMVR 299 (471)
T ss_pred CCCcccCCCCCCHHHHHHH
Confidence 3467889999999988754
No 11
>PHA02736 Viral ankyrin protein; Provisional
Probab=95.77 E-value=0.0086 Score=49.90 Aligned_cols=58 Identities=26% Similarity=0.268 Sum_probs=37.0
Q ss_pred hhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
...+++|.+|+||||+|++.++... +.-++.......+.....+|++|+||..+....
T Consensus 8 ~~~~~~d~~g~tpLh~A~~~g~~~~--------------l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~ 65 (154)
T PHA02736 8 IFASEPDIEGENILHYLCRNGGVTD--------------LLAFKNAISDENRYLVLEYNRHGKQCVHIVSNP 65 (154)
T ss_pred hHHHhcCCCCCCHHHHHHHhCCHHH--------------HHHHHHHhcchhHHHHHHhcCCCCEEEEeeccc
Confidence 3578999999999999999885111 111111111112334567799999998877554
No 12
>PF13606 Ank_3: Ankyrin repeat
Probab=95.73 E-value=0.0021 Score=40.05 Aligned_cols=18 Identities=33% Similarity=0.414 Sum_probs=15.2
Q ss_pred CCCchhhhhhhcCCCCcc
Q 023260 15 EGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 15 ~GNT~LHLAa~~~~~~~l 32 (285)
+|+||||+|++.++.+.+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v 18 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIV 18 (30)
T ss_pred CCCCHHHHHHHhCCHHHH
Confidence 699999999999875544
No 13
>PHA02798 ankyrin-like protein; Provisional
Probab=95.71 E-value=0.0028 Score=62.88 Aligned_cols=51 Identities=14% Similarity=-0.018 Sum_probs=37.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.++.+ ++ .....+..|++|.||.++..+.
T Consensus 251 vN~~d~~G~TPL~~A~~~~~~~~v~~L----------------L~---~GAdin~~d~~G~TpL~~A~~~ 301 (489)
T PHA02798 251 INQVDELGFNPLYYSVSHNNRKIFEYL----------------LQ---LGGDINIITELGNTCLFTAFEN 301 (489)
T ss_pred CCCcCcCCccHHHHHHHcCcHHHHHHH----------------HH---cCCcccccCCCCCcHHHHHHHc
Confidence 688999999999999998865433221 11 1124778899999999887554
No 14
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=95.68 E-value=0.0021 Score=40.36 Aligned_cols=18 Identities=39% Similarity=0.636 Sum_probs=15.1
Q ss_pred CCCchhhhhhhcCCCCcc
Q 023260 15 EGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 15 ~GNT~LHLAa~~~~~~~l 32 (285)
+|+||||+|+..++.+.+
T Consensus 1 dG~TpLh~A~~~~~~~~v 18 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIV 18 (33)
T ss_dssp TSBBHHHHHHHTTCHHHH
T ss_pred CcccHHHHHHHHHHHHHH
Confidence 699999999999975544
No 15
>PHA02736 Viral ankyrin protein; Provisional
Probab=95.66 E-value=0.0042 Score=51.82 Aligned_cols=71 Identities=18% Similarity=0.167 Sum_probs=37.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCc---cccc-------------cch-hHHHHHHHHHHhhhhhhcC--cchhhcccCCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDR---LNVV-------------SGS-ALQMQRELLWFQAVKKVVP--RKLAEAKNKKG 68 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~---l~~~-------------~ga-alqm~~el~w~k~v~~~~~--~~~~~~~N~dG 68 (285)
+++.+|++|.||||+|++.+..+. +..+ .|. +|.....-...+.++..+. ....+.+|++|
T Consensus 47 ~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g 126 (154)
T PHA02736 47 LVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAF 126 (154)
T ss_pred HHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCC
Confidence 467778888888888887765321 1111 111 2322211111222333332 23567788899
Q ss_pred CCccccchhh
Q 023260 69 LTPRALFSEQ 78 (285)
Q Consensus 69 ~Tp~dif~~~ 78 (285)
.||..+....
T Consensus 127 ~tpL~~A~~~ 136 (154)
T PHA02736 127 KTPYYVACER 136 (154)
T ss_pred CCHHHHHHHc
Confidence 9998776543
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=95.60 E-value=0.0043 Score=61.47 Aligned_cols=24 Identities=33% Similarity=0.495 Sum_probs=20.6
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|++.++.+.+
T Consensus 65 vn~~d~~G~TpLh~Aa~~g~~eiv 88 (446)
T PHA02946 65 PNETDDDGNYPLHIASKINNNRIV 88 (446)
T ss_pred CCccCCCCCCHHHHHHHcCCHHHH
Confidence 588999999999999999875544
No 17
>PHA02989 ankyrin repeat protein; Provisional
Probab=95.53 E-value=0.0038 Score=62.09 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=36.8
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|++|+||||+|+..++.+.++.+ ++ .....+.+|++|.||.......
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~~~v~~L----------------L~---~Gadin~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNYEAFNYL----------------LK---LGDDIYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCHHHHHHH----------------HH---cCCCccccCCCCCCHHHHHHHc
Confidence 589999999999999998865444322 01 1124678899999998877543
No 18
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.53 E-value=0.0032 Score=60.89 Aligned_cols=52 Identities=29% Similarity=0.358 Sum_probs=38.7
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccc
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif 75 (285)
+..+|.-|.+|||+||+|+..++...+..+.-+ .-..++..|+-|-||.-+.
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDS------------------gvC~VD~qNrAGYtpiMLa 309 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDS------------------GVCDVDQQNRAGYTPVMLA 309 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhcc------------------CcccccccccccccHHHHH
Confidence 567899999999999999999987776543111 1235788888888886654
No 19
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.45 E-value=0.0044 Score=65.00 Aligned_cols=25 Identities=12% Similarity=0.222 Sum_probs=18.3
Q ss_pred ccchHHHHHHHHHHHHhhhcCCCCC
Q 023260 95 SSCMIVATLIATVVFAAALTVPGGN 119 (285)
Q Consensus 95 ~sllvVA~LIATVtFaA~ft~PGG~ 119 (285)
+++++-...++.+|.=.-...||--
T Consensus 511 ~nL~~Y~lFlv~lT~Yv~~~~~~~~ 535 (929)
T KOG0510|consen 511 NNLLIYSLFLVSLTIYVLLIKAGMA 535 (929)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 3467777888888888777777743
No 20
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.43 E-value=0.0053 Score=57.98 Aligned_cols=19 Identities=32% Similarity=0.310 Sum_probs=15.5
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
.....|++|.||.|..+-.
T Consensus 125 ~v~icnk~g~tpldkakp~ 143 (448)
T KOG0195|consen 125 AVNICNKKGMTPLDKAKPM 143 (448)
T ss_pred eeeecccCCCCchhhhchH
Confidence 3788999999999977544
No 21
>PHA02730 ankyrin-like protein; Provisional
Probab=95.23 E-value=0.0069 Score=63.09 Aligned_cols=48 Identities=27% Similarity=0.378 Sum_probs=34.0
Q ss_pred hc-cccCCCCchhhhhhhcCC---CCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VD-STDGEGNNILHLAGKLAP---PDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n-~~D~~GNT~LHLAa~~~~---~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+| ++|++|+||||.|+..+. .+.++++ .|| ..+.+|++|.||......
T Consensus 33 in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GA---------------------din~kD~~G~TPLh~Aa~ 86 (672)
T PHA02730 33 LSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGV---------------------ERLCRNNEGLTPLGVYSK 86 (672)
T ss_pred hhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCC---------------------CCcccCCCCCChHHHHHH
Confidence 45 899999999999999863 3333322 222 467889999999886533
No 22
>PHA02741 hypothetical protein; Provisional
Probab=94.89 E-value=0.013 Score=49.86 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=39.6
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+.+++.+|.+|+||||.|++.++.+.+..+ +...+ ..-.....+.+|.+|+||..+....
T Consensus 11 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l----------~~~~~---~~~~ga~in~~d~~g~T~Lh~A~~~ 70 (169)
T PHA02741 11 EEMIAEKNSEGENFFHEAARCGCFDIIARF----------TPFIR---GDCHAAALNATDDAGQMCIHIAAEK 70 (169)
T ss_pred HHHhhccccCCCCHHHHHHHcCCHHHHHHH----------HHHhc---cchhhhhhhccCCCCCcHHHHHHHc
Confidence 457899999999999999999975443211 00000 0001234678899999998877654
No 23
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=94.84 E-value=0.0087 Score=53.15 Aligned_cols=19 Identities=16% Similarity=-0.020 Sum_probs=14.1
Q ss_pred chhhcccCCCCCccccchh
Q 023260 59 KLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 59 ~~~~~~N~dG~Tp~dif~~ 77 (285)
...+..|+.|.|+......
T Consensus 97 advna~tn~G~T~LHyAag 115 (226)
T KOG4412|consen 97 ADVNATTNGGQTCLHYAAG 115 (226)
T ss_pred CCcceecCCCcceehhhhc
Confidence 3577888999998876543
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=94.77 E-value=0.0095 Score=58.04 Aligned_cols=18 Identities=22% Similarity=0.150 Sum_probs=14.5
Q ss_pred hhhcccCCCCCccccchh
Q 023260 60 LAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~ 77 (285)
..+.+|++|.||.++..+
T Consensus 280 d~n~~d~~g~TpL~~A~~ 297 (434)
T PHA02874 280 DISIKDNKGENPIDTAFK 297 (434)
T ss_pred CCCCCCCCCCCHHHHHHH
Confidence 467889999999987643
No 25
>PHA02859 ankyrin repeat protein; Provisional
Probab=94.69 E-value=0.01 Score=52.59 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=15.6
Q ss_pred hhccccCCCCchhhhhhhc
Q 023260 8 LVDSTDGEGNNILHLAGKL 26 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~ 26 (285)
-+|.+|.+|.||||+|+..
T Consensus 115 din~~d~~G~TpLh~a~~~ 133 (209)
T PHA02859 115 SITEEDEDGKNLLHMYMCN 133 (209)
T ss_pred CCCCcCCCCCCHHHHHHHh
Confidence 4688999999999998764
No 26
>PHA02743 Viral ankyrin protein; Provisional
Probab=94.67 E-value=0.013 Score=50.08 Aligned_cols=70 Identities=13% Similarity=0.123 Sum_probs=40.2
Q ss_pred hhccccCCCCchhhhhhhcCCCCcc---ccc--c-----------ch-hHHHHHHHHHHhhhhhhc--CcchhhcccCCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRL---NVV--S-----------GS-ALQMQRELLWFQAVKKVV--PRKLAEAKNKKG 68 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l---~~~--~-----------ga-alqm~~el~w~k~v~~~~--~~~~~~~~N~dG 68 (285)
.+|.+|.+|+||||+|+..+....+ ..+ . |. +|.........+-++..+ .....+..|++|
T Consensus 49 ~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 128 (166)
T PHA02743 49 LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQH 128 (166)
T ss_pred hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCC
Confidence 5788999999999999988765431 111 1 11 222221112223333333 133466778888
Q ss_pred CCccccchh
Q 023260 69 LTPRALFSE 77 (285)
Q Consensus 69 ~Tp~dif~~ 77 (285)
.||..+...
T Consensus 129 ~tpL~~A~~ 137 (166)
T PHA02743 129 ETAYHIAYK 137 (166)
T ss_pred CCHHHHHHH
Confidence 898876544
No 27
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=94.60 E-value=0.012 Score=51.92 Aligned_cols=48 Identities=29% Similarity=0.298 Sum_probs=35.7
Q ss_pred hhhhhccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccc
Q 023260 5 ADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRA 73 (285)
Q Consensus 5 k~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~d 73 (285)
|.-.+|.+|+||-||||-||+.++.+.++.+ +|| ..+.+-++|-||..
T Consensus 86 ~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gA---------------------n~~a~T~~GWTPLh 135 (228)
T KOG0512|consen 86 KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGA---------------------NKEAKTNEGWTPLH 135 (228)
T ss_pred ccccccccccccccHHHHHHhcCchHHHHHHHHccC---------------------CcccccccCccchh
Confidence 3446899999999999999999987665432 232 45667778888865
No 28
>PHA02795 ankyrin-like protein; Provisional
Probab=94.55 E-value=0.011 Score=58.74 Aligned_cols=52 Identities=15% Similarity=0.082 Sum_probs=37.5
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
-+|.+|.+|+||||.|+..++.+.+..+ ++ .....+.+|++|.||.......
T Consensus 213 DIN~kD~~G~TpLh~Aa~~g~~eiVelL----------------L~---~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 213 DINQLDAGGRTLLYRAIYAGYIDLVSWL----------------LE---NGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred CcCcCCCCCCCHHHHHHHcCCHHHHHHH----------------HH---CCCCCCCcCCCCCCHHHHHHHc
Confidence 3588999999999999999875443321 00 1124678899999999877543
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=94.50 E-value=0.012 Score=57.53 Aligned_cols=52 Identities=21% Similarity=0.128 Sum_probs=36.9
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
-+|.+|.+|+||||+|+..++.+.+..+ ++ .....+..|.+|.||.++....
T Consensus 242 din~~d~~g~TpL~~A~~~~~~~iv~~L----------------l~---~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 242 PINIKDVYGFTPLHYAVYNNNPEFVKYL----------------LD---LGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHH----------------HH---cCCCCCccCCCCCcHHHHHHHh
Confidence 3578999999999999998864433211 11 1124678899999999887543
No 30
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=94.32 E-value=0.02 Score=60.65 Aligned_cols=57 Identities=16% Similarity=0.096 Sum_probs=37.4
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQH 79 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~h 79 (285)
.|.+|.+|+||||.|+..++...+.. .-++.+-+ .....+.+|++|+||..+..+++
T Consensus 490 vN~~D~~G~TPLh~Aa~~g~~~~v~~------------e~~k~LL~--~GADIN~~d~~G~TPLh~A~~~g 546 (764)
T PHA02716 490 NAVCETSGMTPLHVSIISHTNANIVM------------DSFVYLLS--IQYNINIPTKNGVTPLMLTMRNN 546 (764)
T ss_pred ccccCCCCCCHHHHHHHcCCccchhH------------HHHHHHHh--CCCCCcccCCCCCCHHHHHHHcC
Confidence 57789999999999999876543210 00011000 12247789999999999876543
No 31
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=93.95 E-value=0.013 Score=40.58 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=24.9
Q ss_pred CCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 16 GNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 16 GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
|+||||.|++.++.+.+ +|+ +++ .......|.+|.||.+..-.
T Consensus 1 g~t~lh~A~~~g~~~~~--------------~~L--l~~---~~din~~d~~g~t~lh~A~~ 43 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIV--------------KLL--LEH---GADINAQDEDGRTPLHYAAK 43 (54)
T ss_dssp SSBHHHHHHHTT-HHHH--------------HHH--HHT---TSGTT-B-TTS--HHHHHHH
T ss_pred CChHHHHHHHhCCHHHH--------------HHH--HHC---CCCCCCCCCCCCCHHHHHHH
Confidence 89999999998864432 222 111 12356669999999887654
No 32
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=93.92 E-value=0.025 Score=60.10 Aligned_cols=19 Identities=11% Similarity=0.212 Sum_probs=14.4
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|++|.||..+...+
T Consensus 647 din~~d~~G~TpLh~A~~~ 665 (823)
T PLN03192 647 NVDSEDHQGATALQVAMAE 665 (823)
T ss_pred CCCCCCCCCCCHHHHHHHC
Confidence 3567889999998876543
No 33
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=93.57 E-value=0.024 Score=60.24 Aligned_cols=49 Identities=22% Similarity=0.140 Sum_probs=35.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccch
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFS 76 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~ 76 (285)
.|.+|.+|+||||+||..++.+.+..+. + .....+.+|++|.||.....
T Consensus 551 ~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll----------------~---~gadin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 551 PDIGDSKGRTPLHIAASKGYEDCVLVLL----------------K---HACNVHIRDANGNTALWNAI 599 (823)
T ss_pred CCCCCCCCCCHHHHHHHcChHHHHHHHH----------------h---cCCCCCCcCCCCCCHHHHHH
Confidence 5889999999999999998755433210 1 11246778999999976543
No 34
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=93.53 E-value=0.038 Score=55.46 Aligned_cols=56 Identities=23% Similarity=0.329 Sum_probs=37.9
Q ss_pred cccc-CCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh-hhhhhHH
Q 023260 10 DSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE-QHRDLKE 84 (285)
Q Consensus 10 n~~D-~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~-~h~~l~~ 84 (285)
|.-| ..||||||.||+.|...+..++ .-| ..+....|.+|+||.|+... .|.++-+
T Consensus 160 N~~hpekg~TpLHvAAk~Gq~~Q~ElL-----------~vY--------GAD~~a~d~~GmtP~~~AR~~gH~~lae 217 (669)
T KOG0818|consen 160 NFFHPEKGNTPLHVAAKAGQILQAELL-----------AVY--------GADPGAQDSSGMTPVDYARQGGHHELAE 217 (669)
T ss_pred CCCCcccCCchhHHHHhccchhhhhHH-----------hhc--------cCCCCCCCCCCCcHHHHHHhcCchHHHH
Confidence 4445 6899999999999975543321 011 12467889999999999865 3555543
No 35
>PHA02743 Viral ankyrin protein; Provisional
Probab=93.50 E-value=0.032 Score=47.56 Aligned_cols=21 Identities=10% Similarity=0.003 Sum_probs=18.0
Q ss_pred hccccCCCCchhhhhhhcCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPP 29 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~ 29 (285)
.+..|.++.++||.|++.+..
T Consensus 13 ~~~~~~~~~~~l~~a~~~g~~ 33 (166)
T PHA02743 13 AVEIDEDEQNTFLRICRTGNI 33 (166)
T ss_pred HhhhccCCCcHHHHHHHcCCH
Confidence 467888999999999998875
No 36
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=93.37 E-value=0.025 Score=58.91 Aligned_cols=51 Identities=24% Similarity=0.249 Sum_probs=35.7
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.+..+ ++. ....+.+|++|.||..+....
T Consensus 108 in~~d~~G~TpLh~Aa~~g~~eiv~~L----------------L~~---Gadvn~~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 108 PNCRDYDGRTPLHIACANGHVQVVRVL----------------LEF---GADPTLLDKDGKTPLELAEEN 158 (664)
T ss_pred CCCcCCCCCcHHHHHHHCCCHHHHHHH----------------HHC---CCCCCCCCCCCCCHHHHHHHC
Confidence 588999999999999999875543321 010 123567888999998776543
No 37
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=93.15 E-value=0.043 Score=55.19 Aligned_cols=51 Identities=29% Similarity=0.337 Sum_probs=34.8
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
.+.+|.||-||||-||.-+..+...++ |+ .-...+..++.|+||.|++.++
T Consensus 224 ~~~~D~dgWtPlHAAA~Wg~~~~~elL----------------~~---~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 224 VNIKDYDGWTPLHAAAHWGQEDACELL----------------VE---HGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred cccccccCCCcccHHHHhhhHhHHHHH----------------HH---hhcccchhhhcCCCCccchhhh
Confidence 467888888888888887753322111 00 1124778889999999999873
No 38
>PHA02878 ankyrin repeat protein; Provisional
Probab=93.12 E-value=0.029 Score=55.44 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=37.1
Q ss_pred hccccCC-CCchhhhhhhcCCCCccccc--c----------ch-hHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 9 VDSTDGE-GNNILHLAGKLAPPDRLNVV--S----------GS-ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~-GNT~LHLAa~~~~~~~l~~~--~----------ga-alqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+ |+||||.|+..++.+.+..+ . |. +++....-.-.+-|+..+. ....+.+|++|.||..
T Consensus 160 in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh 239 (477)
T PHA02878 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLH 239 (477)
T ss_pred CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 5677877 88888888887765433211 1 11 2222111111112222221 2346778899999988
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
....
T Consensus 240 ~A~~ 243 (477)
T PHA02878 240 ISVG 243 (477)
T ss_pred HHHH
Confidence 7654
No 39
>PHA02792 ankyrin-like protein; Provisional
Probab=92.73 E-value=0.039 Score=57.19 Aligned_cols=49 Identities=14% Similarity=0.081 Sum_probs=31.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccch
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFS 76 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~ 76 (285)
+|.+|++|+||||.|+..++.+.++.+ -+ .......+|++|.||.++..
T Consensus 403 IN~kD~~G~TPLh~Aa~~~n~eivelL-----------------Ls--~GADIN~kD~~G~TpL~~A~ 451 (631)
T PHA02792 403 INKIDKHGRSILYYCIESHSVSLVEWL-----------------ID--NGADINITTKYGSTCIGICV 451 (631)
T ss_pred cccccccCcchHHHHHHcCCHHHHHHH-----------------HH--CCCCCCCcCCCCCCHHHHHH
Confidence 477888888888888876653322211 00 01246678889999988764
No 40
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.68 E-value=0.035 Score=55.93 Aligned_cols=45 Identities=29% Similarity=0.485 Sum_probs=33.9
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~d 73 (285)
.+..+|..||||||||+.+++.....++ .|| ....+|++|-+|..
T Consensus 47 ~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~A---------------------dv~~kN~~gWs~L~ 93 (560)
T KOG0522|consen 47 VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGA---------------------DVSIKNNEGWSPLH 93 (560)
T ss_pred eeccccCCCCccHHHHHHhcCHHHHHHHHhcCC---------------------CccccccccccHHH
Confidence 4678999999999999999986654433 222 36788888888754
No 41
>PHA02876 ankyrin repeat protein; Provisional
Probab=92.57 E-value=0.036 Score=57.30 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=28.6
Q ss_pred hccccCCCCchhhhhhhcCCC-CccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccch
Q 023260 9 VDSTDGEGNNILHLAGKLAPP-DRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFS 76 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~-~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~ 76 (285)
+|.+|.+|+||||+|++.+.. +.+..+ ++ .....+..|.+|.||..+..
T Consensus 435 in~~d~~G~TpLh~Aa~~~~~~~iv~lL----------------l~---~Gad~n~~d~~g~tpl~~a~ 484 (682)
T PHA02876 435 VNSKNKDLSTPLHYACKKNCKLDVIEML----------------LD---NGADVNAINIQNQYPLLIAL 484 (682)
T ss_pred CCcCCCCCChHHHHHHHhCCcHHHHHHH----------------HH---CCCCCCCCCCCCCCHHHHHH
Confidence 466777777777777765421 111110 01 12346788999999987653
No 42
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=92.42 E-value=0.028 Score=42.12 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=14.8
Q ss_pred hccccCCCCchhhhhhhcCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPP 29 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~ 29 (285)
+|.+|.+|+||||+|+..++.
T Consensus 52 ~~~~~~~g~t~L~~A~~~~~~ 72 (89)
T PF12796_consen 52 INSQDKNGNTALHYAAENGNL 72 (89)
T ss_dssp TT-BSTTSSBHHHHHHHTTHH
T ss_pred ccccCCCCCCHHHHHHHcCCH
Confidence 466777888888888887653
No 43
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.32 E-value=0.04 Score=55.14 Aligned_cols=26 Identities=23% Similarity=0.266 Sum_probs=21.8
Q ss_pred hhccccCCCCchhhhhhhcCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLN 33 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~ 33 (285)
-+|.+|..|||+||.+|..|+-+.++
T Consensus 175 Dvn~ks~kGNTALH~caEsG~vdivq 200 (615)
T KOG0508|consen 175 DVNAKSYKGNTALHDCAESGSVDIVQ 200 (615)
T ss_pred CcchhcccCchHHHhhhhcccHHHHH
Confidence 46899999999999999998765543
No 44
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=92.31 E-value=0.057 Score=57.22 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=27.4
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif 75 (285)
+|.+|.+|+||||+|++.++... +-|+.++. ....+.+|.+|.||....
T Consensus 205 VN~kD~~G~TPLH~Aa~~g~~~~------------------eIVklLLe~GADVN~kD~~G~TPLh~A 254 (764)
T PHA02716 205 VNLQNNHLITPLHTYLITGNVCA------------------SVIKKIIELGGDMDMKCVNGMSPIMTY 254 (764)
T ss_pred CCCCCCCCCCHHHHHHHcCCCCH------------------HHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 45667777777777776653210 00111111 124677889999997643
No 45
>PHA02798 ankyrin-like protein; Provisional
Probab=92.11 E-value=0.064 Score=53.26 Aligned_cols=19 Identities=11% Similarity=0.151 Sum_probs=13.4
Q ss_pred hccccCCCCchhhhhhhcC
Q 023260 9 VDSTDGEGNNILHLAGKLA 27 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~ 27 (285)
+|.+|.+|+||||.|+..+
T Consensus 102 iN~~d~~G~TpLh~a~~~~ 120 (489)
T PHA02798 102 INKKNSDGETPLYCLLSNG 120 (489)
T ss_pred CCCCCCCcCcHHHHHHHcC
Confidence 4667777777777777654
No 46
>PHA03095 ankyrin-like protein; Provisional
Probab=91.83 E-value=0.053 Score=52.82 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=13.8
Q ss_pred hccccCCCCchhhhhhhcCC
Q 023260 9 VDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~ 28 (285)
+|.+|.+|+||||+|+..++
T Consensus 76 in~~~~~g~TpLh~A~~~~~ 95 (471)
T PHA03095 76 VNAPERCGFTPLHLYLYNAT 95 (471)
T ss_pred CCCCCCCCCCHHHHHHHcCC
Confidence 46667777777777777663
No 47
>PHA02791 ankyrin-like protein; Provisional
Probab=91.79 E-value=0.068 Score=50.09 Aligned_cols=68 Identities=18% Similarity=0.032 Sum_probs=38.2
Q ss_pred ccccCCCCchhhhhhhcCCCCccccc--cch---------hHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccchh
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRLNVV--SGS---------ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l~~~--~ga---------alqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif~~ 77 (285)
+.+|.+|+||||.|+..++.+.+..+ .|+ +|....+....+-|+..+. ....+.+|++|.||......
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 57999999999999999875543321 111 2222211111222333322 12356677888888776544
No 48
>PHA02874 ankyrin repeat protein; Provisional
Probab=91.78 E-value=0.055 Score=52.74 Aligned_cols=22 Identities=32% Similarity=0.302 Sum_probs=16.2
Q ss_pred hccccCCCCchhhhhhhcCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+|.+|.+|+||||.|++.++.+
T Consensus 117 ~n~~~~~g~T~Lh~A~~~~~~~ 138 (434)
T PHA02874 117 VNIKDAELKTFLHYAIKKGDLE 138 (434)
T ss_pred CCCCCCCCccHHHHHHHCCCHH
Confidence 5677778888888888777644
No 49
>PHA02876 ankyrin repeat protein; Provisional
Probab=91.72 E-value=0.059 Score=55.72 Aligned_cols=25 Identities=20% Similarity=0.167 Sum_probs=21.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLN 33 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~ 33 (285)
+|.+|.+|+||||+||+.|+.+.++
T Consensus 171 vn~~d~~G~TpLh~Aa~~G~~~iv~ 195 (682)
T PHA02876 171 VNAKDIYCITPIHYAAERGNAKMVN 195 (682)
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 5789999999999999999765544
No 50
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=91.53 E-value=0.056 Score=52.55 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=43.0
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh-hhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ-HRD 81 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~-h~~ 81 (285)
-+|.||.||-|+|..|+..|+.+.++++. .+|..+..+-|.||.|+..|.-+. |++
T Consensus 365 dVNiQDdDGSTALMCA~EHGhkEivklLL------------------A~p~cd~sLtD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 365 DVNIQDDDGSTALMCAAEHGHKEIVKLLL------------------AVPSCDISLTDVDGSTALSIALEAGHRE 421 (452)
T ss_pred CCccccCCccHHHhhhhhhChHHHHHHHh------------------ccCcccceeecCCCchhhhhHHhcCchH
Confidence 36899999999999999999865554321 257778899999999999887553 444
No 51
>PHA02884 ankyrin repeat protein; Provisional
Probab=91.33 E-value=0.066 Score=50.76 Aligned_cols=65 Identities=14% Similarity=0.084 Sum_probs=37.5
Q ss_pred cCCCCchhhhhhhcCCCCccccc--cch------------hHHHHHHHHHHhhhhhhcCc-chhhcccCCCCCccccchh
Q 023260 13 DGEGNNILHLAGKLAPPDRLNVV--SGS------------ALQMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 13 D~~GNT~LHLAa~~~~~~~l~~~--~ga------------alqm~~el~w~k~v~~~~~~-~~~~~~N~dG~Tp~dif~~ 77 (285)
|++|.||||+|++.++.+.++.+ .|| ++.....-.+.+-++..+.. ...+.+|++|.||.++..+
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 57999999999988875443221 111 23332222233334433322 2466788999999886643
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=91.15 E-value=0.09 Score=52.96 Aligned_cols=51 Identities=25% Similarity=0.270 Sum_probs=37.7
Q ss_pred hhhccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
.-+|.+|++|+||||-|+.-++...+..+ .|| +....|.+|..|.|+...+
T Consensus 97 a~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA---------------------~~~avNsdg~~P~dl~e~e 149 (527)
T KOG0505|consen 97 ANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGA---------------------NLLAVNSDGNMPYDLAEDE 149 (527)
T ss_pred CCccccccccCCcchhhcccccHHHHHHHHHhhh---------------------hhhhccCCCCCccccccCc
Confidence 35799999999999999998876654332 122 4667788888888887643
No 53
>PHA02791 ankyrin-like protein; Provisional
Probab=91.12 E-value=0.072 Score=49.94 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=12.7
Q ss_pred ccccCCCCchhhhhhhcCCCC
Q 023260 10 DSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~ 30 (285)
|.+|.+|+||||+|+..++.+
T Consensus 88 n~~d~~G~TpLh~Aa~~g~~e 108 (284)
T PHA02791 88 SQFDDKGNTALYYAVDSGNMQ 108 (284)
T ss_pred CCCCCCCCCHHHHHHHcCCHH
Confidence 455666666666666665543
No 54
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=91.03 E-value=0.088 Score=36.94 Aligned_cols=16 Identities=31% Similarity=0.449 Sum_probs=8.4
Q ss_pred hhccccCCCCchhhhh
Q 023260 8 LVDSTDGEGNNILHLA 23 (285)
Q Consensus 8 l~n~~D~~GNT~LHLA 23 (285)
-+|.+|++|.||||+|
T Consensus 41 d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 41 DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -TT---TTS--HHHH-
T ss_pred CCCCCcCCCCCHHHhC
Confidence 4688999999999998
No 55
>PHA02875 ankyrin repeat protein; Provisional
Probab=90.94 E-value=0.075 Score=51.13 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=37.1
Q ss_pred ccccCCCCchhhhhhhcCCCCccccc--cc-----------hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccc
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l~~~--~g-----------aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif 75 (285)
+..|.+|+||||+|+..++.+.++.+ .| .+++....-...+-|+..+. ....+.+|.+|.||....
T Consensus 96 ~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A 175 (413)
T PHA02875 96 DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA 175 (413)
T ss_pred ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 45677889999999988765443221 11 12322111111122222221 224667889999998876
Q ss_pred hhh
Q 023260 76 SEQ 78 (285)
Q Consensus 76 ~~~ 78 (285)
...
T Consensus 176 ~~~ 178 (413)
T PHA02875 176 MAK 178 (413)
T ss_pred HHc
Confidence 543
No 56
>PHA02878 ankyrin repeat protein; Provisional
Probab=90.73 E-value=0.092 Score=51.88 Aligned_cols=18 Identities=11% Similarity=0.032 Sum_probs=13.0
Q ss_pred hhhcccCCCCCccccchh
Q 023260 60 LAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~ 77 (285)
..+..|.+|.||......
T Consensus 193 d~n~~d~~g~tpLh~A~~ 210 (477)
T PHA02878 193 NVNIPDKTNNSPLHHAVK 210 (477)
T ss_pred CCCCcCCCCCCHHHHHHH
Confidence 356678888998877654
No 57
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=90.65 E-value=0.12 Score=54.03 Aligned_cols=66 Identities=26% Similarity=0.256 Sum_probs=32.7
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|+.||||||+|+..+....-.. . -..|+...+. +.....-+ .......|++|.||.++..++
T Consensus 201 in~~d~~g~T~Lh~A~~~~~~~~~~~-~-l~~~~~~~l~--~ll~~~~~~~el~~i~N~~g~TPL~~A~~~ 267 (743)
T TIGR00870 201 ILTADSLGNTLLHLLVMENEFKAEYE-E-LSCQMYNFAL--SLLDKLRDSKELEVILNHQGLTPLKLAAKE 267 (743)
T ss_pred hhhHhhhhhHHHHHHHhhhhhhHHHH-H-HHHHHHHHHH--HHHhccCChHhhhhhcCCCCCCchhhhhhc
Confidence 57788888888888888653211000 0 0011111110 00111001 111367899999998876543
No 58
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=90.61 E-value=0.15 Score=42.62 Aligned_cols=57 Identities=21% Similarity=0.330 Sum_probs=34.4
Q ss_pred ccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
|.+|.+|+||||+|+..+++..- ...+.+.+ ++. ..+.......|.+|.||.+....
T Consensus 100 ~~~~~~g~t~l~~a~~~~~~~~~------~~~~~~~l--l~~---g~~~~~~~~~~~~g~tpl~~A~~ 156 (235)
T COG0666 100 NAKDADGDTPLHLAALNGNPPEG------NIEVAKLL--LEA---GADLDVNNLRDEDGNTPLHWAAL 156 (235)
T ss_pred ccccCCCCcHHHHHHhcCCcccc------hHHHHHHH--HHc---CCCCCCccccCCCCCchhHHHHH
Confidence 88999999999999999974110 00111111 110 00012466779999999886543
No 59
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=90.54 E-value=0.068 Score=56.15 Aligned_cols=55 Identities=24% Similarity=0.315 Sum_probs=34.9
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQH 79 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~h 79 (285)
-+|.||.+|||.||+-+..-. .+|= +..-+.-........|++|.||..+..+..
T Consensus 265 d~~aqDS~GNTVLH~lVi~~~-----------~~My------~~~L~~ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 265 DPNAQDSNGNTVLHMLVIHFV-----------TEMY------DLALELGANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred CCCccccCCChHHHHHHHHHH-----------HHHH------HHHHhcCCCccccccccCCCChHHHHHHhh
Confidence 368999999999999988622 1221 110000000136788999999988876643
No 60
>PHA02730 ankyrin-like protein; Provisional
Probab=90.22 E-value=0.11 Score=54.38 Aligned_cols=49 Identities=14% Similarity=0.034 Sum_probs=33.3
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccC-CCCCccccch
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNK-KGLTPRALFS 76 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~-dG~Tp~dif~ 76 (285)
+|.+|++|+||||+|+..++.+.+..+ ++ .....+.+|+ .|.||.+...
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~L----------------I~---~GAdIN~~d~~~g~TaL~~Aa 504 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRL----------------LE---YGASVNTTSRSIINTAIQKSS 504 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHH----------------HH---CCCCCCCCCCcCCcCHHHHHH
Confidence 689999999999999998764333221 00 1123566775 5899988654
No 61
>PHA02917 ankyrin-like protein; Provisional
Probab=90.13 E-value=0.12 Score=54.05 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=35.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||.|+..++.+.+..+ ++ .....+.+|.+|.||..+...
T Consensus 445 IN~kd~~G~TpLh~Aa~~~~~~~v~~L----------------l~---~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 445 INMIDKRGETLLHKAVRYNKQSLVSLL----------------LE---SGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred CCCCCCCCcCHHHHHHHcCCHHHHHHH----------------HH---CcCCCCCCCCCCCCHHHHHHH
Confidence 489999999999999987653322111 00 112467889999999887753
No 62
>PHA02859 ankyrin repeat protein; Provisional
Probab=90.06 E-value=0.12 Score=45.74 Aligned_cols=20 Identities=15% Similarity=0.014 Sum_probs=15.9
Q ss_pred hhcccc-CCCCchhhhhhhcC
Q 023260 8 LVDSTD-GEGNNILHLAGKLA 27 (285)
Q Consensus 8 l~n~~D-~~GNT~LHLAa~~~ 27 (285)
-+|.+| .+|.||||+|+...
T Consensus 78 dvn~~~~~~g~TpLh~a~~~~ 98 (209)
T PHA02859 78 DVNFKTRDNNLSALHHYLSFN 98 (209)
T ss_pred CCCccCCCCCCCHHHHHHHhC
Confidence 468887 48999999998754
No 63
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=89.43 E-value=0.16 Score=42.60 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=35.2
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|.+|+||||.|+..++...+..+ . + .....+..|..|.|+.+.....
T Consensus 139 ~~~~~~~~g~tpl~~A~~~~~~~~~~~l--------l--------~---~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 139 VNNLRDEDGNTPLHWAALNGDADIVELL--------L--------E---AGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred CccccCCCCCchhHHHHHcCchHHHHHH--------H--------h---cCCCCcccccCCCcchhhhccc
Confidence 4577899999999999999875322211 0 0 1223556689999998876543
No 64
>PHA02875 ankyrin repeat protein; Provisional
Probab=88.75 E-value=0.14 Score=49.32 Aligned_cols=70 Identities=17% Similarity=0.143 Sum_probs=39.7
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c-----------c-hhHHHHHHHHHHhhhhhhcCc-chhhcccCCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S-----------G-SALQMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~-----------g-aalqm~~el~w~k~v~~~~~~-~~~~~~N~dG~Tp~d 73 (285)
.|.+|.+|+||||.|++.++.+.+..+ . | .+++......-.+-|+..+.. ......|.+|.||..
T Consensus 61 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh 140 (413)
T PHA02875 61 PDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLH 140 (413)
T ss_pred ccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 466788999999999999876543221 0 1 123221111112223322221 235677889999988
Q ss_pred cchhh
Q 023260 74 LFSEQ 78 (285)
Q Consensus 74 if~~~ 78 (285)
.....
T Consensus 141 ~A~~~ 145 (413)
T PHA02875 141 LAVMM 145 (413)
T ss_pred HHHHc
Confidence 77543
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=88.72 E-value=0.14 Score=53.38 Aligned_cols=20 Identities=25% Similarity=0.029 Sum_probs=16.4
Q ss_pred hccccCCCCchhhhhhhcCC
Q 023260 9 VDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~ 28 (285)
.+.+|.+|+||||.|+..+.
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~ 44 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEH 44 (661)
T ss_pred ccccCCCCCcHHHHHHHhhh
Confidence 47779999999999877644
No 66
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=87.37 E-value=0.16 Score=37.87 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=28.5
Q ss_pred CCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 16 GNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 16 GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
|+||||.|+..+..+.++ |. ++ .......+|.+|.||.......
T Consensus 26 ~~~~l~~A~~~~~~~~~~--------------~L--l~---~g~~~~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVK--------------LL--LE---NGADINSQDKNGNTALHYAAEN 69 (89)
T ss_dssp SSBHHHHHHHTTTHHHHH--------------HH--HH---TTTCTT-BSTTSSBHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHH--------------HH--HH---hcccccccCCCCCCHHHHHHHc
Confidence 899999999988643332 21 11 1123567779999998876543
No 67
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=87.20 E-value=0.26 Score=50.41 Aligned_cols=52 Identities=23% Similarity=0.357 Sum_probs=36.1
Q ss_pred chhhhhhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCcc
Q 023260 2 KAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPR 72 (285)
Q Consensus 2 ~~~k~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~ 72 (285)
|++.+..-..-|.+|.|+||||++.++-.-- | -|.|+.. +...+|..|.|+.
T Consensus 647 g~~~e~~~t~~~~~grt~LHLa~~~gnVvl~--------Q---LLiWyg~--------dv~~rda~g~t~l 698 (749)
T KOG0705|consen 647 GSREEVNETCGEGDGRTALHLAARKGNVVLA--------Q---LLIWYGV--------DVMARDAHGRTAL 698 (749)
T ss_pred cCchhhhccccCCCCcchhhhhhhhcchhHH--------H---HHHHhCc--------cceecccCCchhh
Confidence 3444444455788999999999999862211 1 1569852 5788899999983
No 68
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=85.99 E-value=0.26 Score=54.18 Aligned_cols=20 Identities=30% Similarity=0.356 Sum_probs=10.5
Q ss_pred hccccCCCCchhhhhhhcCC
Q 023260 9 VDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~ 28 (285)
.|.+|+.|.||||.||..++
T Consensus 566 v~ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 566 VNAKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred ccccCCCCCChhhHHHHcCh
Confidence 34455555555555555553
No 69
>PHA02792 ankyrin-like protein; Provisional
Probab=85.97 E-value=0.23 Score=51.61 Aligned_cols=22 Identities=18% Similarity=0.089 Sum_probs=19.6
Q ss_pred hhhccccCCCCchhhhhhhcCC
Q 023260 7 LLVDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~ 28 (285)
-++|++|..|+||||+|+...+
T Consensus 166 ~~i~~~~~~g~t~L~~~i~~~s 187 (631)
T PHA02792 166 YTTDYDDRMGKTVLYYYIITRS 187 (631)
T ss_pred cccccCCCCCCchHHHHHhhCC
Confidence 4679999999999999999874
No 70
>PHA03100 ankyrin repeat protein; Provisional
Probab=85.71 E-value=0.25 Score=48.28 Aligned_cols=23 Identities=26% Similarity=0.157 Sum_probs=17.6
Q ss_pred hccccCCCCchhhhhh--hcCCCCc
Q 023260 9 VDSTDGEGNNILHLAG--KLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa--~~~~~~~ 31 (285)
+|.+|.+|+||||+|+ ..++.+.
T Consensus 99 i~~~d~~g~tpL~~A~~~~~~~~~i 123 (480)
T PHA03100 99 VNAPDNNGITPLLYAISKKSNSYSI 123 (480)
T ss_pred CCCCCCCCCchhhHHHhcccChHHH
Confidence 3778899999999999 6665443
No 71
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=85.21 E-value=1 Score=34.00 Aligned_cols=20 Identities=30% Similarity=0.428 Sum_probs=17.1
Q ss_pred ccccCCCCchhhhhhhcCCC
Q 023260 10 DSTDGEGNNILHLAGKLAPP 29 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~ 29 (285)
|.+|.+|.||||.|++.++.
T Consensus 1 ~~~~~~g~t~l~~a~~~~~~ 20 (126)
T cd00204 1 NARDEDGRTPLHLAASNGHL 20 (126)
T ss_pred CCcCcCCCCHHHHHHHcCcH
Confidence 45789999999999998864
No 72
>PHA02884 ankyrin repeat protein; Provisional
Probab=84.96 E-value=0.38 Score=45.61 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=17.7
Q ss_pred hccccCCCCc-hhhhhhhcCCCCcccc
Q 023260 9 VDSTDGEGNN-ILHLAGKLAPPDRLNV 34 (285)
Q Consensus 9 ~n~~D~~GNT-~LHLAa~~~~~~~l~~ 34 (285)
+-.+|++|+| +||.|++.++.+.++.
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~ 51 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDA 51 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHH
Confidence 5679999988 5666666666555443
No 73
>PHA02989 ankyrin repeat protein; Provisional
Probab=84.91 E-value=0.54 Score=46.78 Aligned_cols=19 Identities=5% Similarity=-0.169 Sum_probs=13.3
Q ss_pred hccccCCCCchhhhhhhcC
Q 023260 9 VDSTDGEGNNILHLAGKLA 27 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~ 27 (285)
+|.+|.+|.||||.|+..+
T Consensus 101 in~~d~~g~tpL~~a~~~~ 119 (494)
T PHA02989 101 INLKTFNGVSPIVCFIYNS 119 (494)
T ss_pred CCCCCCCCCcHHHHHHHhc
Confidence 4667777777777776554
No 74
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=84.73 E-value=0.4 Score=49.30 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=17.2
Q ss_pred hccccCCCCchhhhhhhcCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
.+.+|.+|=||||+||+.++.-
T Consensus 138 pt~~D~~G~~~lHla~~~~~~~ 159 (600)
T KOG0509|consen 138 PTLKDKQGLTPLHLAAQFGHTA 159 (600)
T ss_pred CceecCCCCcHHHHHHHhCchH
Confidence 3668888888888888888653
No 75
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=83.46 E-value=0.5 Score=52.07 Aligned_cols=65 Identities=23% Similarity=0.279 Sum_probs=41.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------------cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------------SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLT 70 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------------~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~T 70 (285)
.+.++..|+||||.|+..++.+.++.+ ..|+.|++.|+.-. -+| .....+..+.+|.|
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~L-Llk---~GA~vna~d~~g~T 608 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAEL-LLK---HGASVNAADLDGFT 608 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHH-HHH---cCCCCCcccccCcc
Confidence 577899999999999999987665432 23334444333110 011 12346677788888
Q ss_pred ccccchh
Q 023260 71 PRALFSE 77 (285)
Q Consensus 71 p~dif~~ 77 (285)
|..++..
T Consensus 609 pL~iA~~ 615 (1143)
T KOG4177|consen 609 PLHIAVR 615 (1143)
T ss_pred hhHHHHH
Confidence 8887754
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=78.36 E-value=0.5 Score=38.03 Aligned_cols=17 Identities=24% Similarity=0.266 Sum_probs=14.2
Q ss_pred CCCchhhhhhhcCCCCc
Q 023260 15 EGNNILHLAGKLAPPDR 31 (285)
Q Consensus 15 ~GNT~LHLAa~~~~~~~ 31 (285)
.|.||||+||..|..+.
T Consensus 33 ggR~plhyAAD~GQl~i 49 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSI 49 (117)
T ss_pred CCcccchHhhhcchHHH
Confidence 79999999999985433
No 77
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=75.93 E-value=0.86 Score=43.42 Aligned_cols=14 Identities=36% Similarity=0.335 Sum_probs=11.2
Q ss_pred hhhcccCCCCCccc
Q 023260 60 LAEAKNKKGLTPRA 73 (285)
Q Consensus 60 ~~~~~N~dG~Tp~d 73 (285)
..+..|..|.||..
T Consensus 92 dvnavnehgntplh 105 (448)
T KOG0195|consen 92 DVNAVNEHGNTPLH 105 (448)
T ss_pred ccchhhccCCCchh
Confidence 57788899999864
No 78
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=75.15 E-value=0.76 Score=25.07 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=13.0
Q ss_pred CCCchhhhhhhcCCCC
Q 023260 15 EGNNILHLAGKLAPPD 30 (285)
Q Consensus 15 ~GNT~LHLAa~~~~~~ 30 (285)
+|+||||+|+..++.+
T Consensus 1 ~~~~~l~~~~~~~~~~ 16 (30)
T smart00248 1 DGRTPLHLAAENGNLE 16 (30)
T ss_pred CCCCHHHHHHHcCCHH
Confidence 5899999999986543
No 79
>PHA02795 ankyrin-like protein; Provisional
Probab=73.91 E-value=1.7 Score=43.51 Aligned_cols=21 Identities=19% Similarity=0.178 Sum_probs=18.8
Q ss_pred hhccccCCCCchhhhhhhcCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~ 28 (285)
-+|.+|++|+||||+|+..++
T Consensus 246 dIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 246 NVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred CCCCcCCCCCCHHHHHHHcCC
Confidence 368899999999999999885
No 80
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=71.88 E-value=1.7 Score=44.38 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=18.0
Q ss_pred hhccccCCCCchhhhhhhcCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~ 28 (285)
-+|..|.||.||||.||.-.+
T Consensus 608 nVNa~DSdGWTPLHCAASCNn 628 (752)
T KOG0515|consen 608 NVNAADSDGWTPLHCAASCNN 628 (752)
T ss_pred cccCccCCCCchhhhhhhcCc
Confidence 368999999999999998543
No 81
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=71.27 E-value=2.8 Score=44.83 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=34.3
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif 75 (285)
+|+.|..||||||.+...|+....+.+. | +.......|.+|++|.++.
T Consensus 682 vn~~d~~g~~plh~~~~~g~~~~~~~ll-------------~------~~a~~~a~~~~~~~~l~~a 729 (785)
T KOG0521|consen 682 VNALDSKGRTPLHHATASGHTSIACLLL-------------K------RGADPNAFDPDGKLPLDIA 729 (785)
T ss_pred chhhhccCCCcchhhhhhcccchhhhhc-------------c------ccccccccCccCcchhhHH
Confidence 6889999999999999998765543321 0 1123567788888888755
No 82
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=70.33 E-value=2.6 Score=44.18 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=16.4
Q ss_pred hhhccccCCCCchhh-hhhhcCC
Q 023260 7 LLVDSTDGEGNNILH-LAGKLAP 28 (285)
Q Consensus 7 ~l~n~~D~~GNT~LH-LAa~~~~ 28 (285)
.-+|..|..|+|||| .|+..++
T Consensus 43 ~~in~~d~~G~t~Lh~~A~~~~~ 65 (743)
T TIGR00870 43 LNINCPDRLGRSALFVAAIENEN 65 (743)
T ss_pred cCCCCcCccchhHHHHHHHhcCh
Confidence 345778999999999 5655544
No 83
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=67.78 E-value=1.8 Score=45.81 Aligned_cols=15 Identities=20% Similarity=-0.020 Sum_probs=9.9
Q ss_pred hhcccCCCCCccccc
Q 023260 61 AEAKNKKGLTPRALF 75 (285)
Q Consensus 61 ~~~~N~dG~Tp~dif 75 (285)
--+.|+.++|+.|+.
T Consensus 141 p~i~nns~~t~ldlA 155 (854)
T KOG0507|consen 141 PFIRNNSKETVLDLA 155 (854)
T ss_pred ccccCcccccHHHHH
Confidence 345677777777764
No 84
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=64.51 E-value=1.8 Score=44.50 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=13.5
Q ss_pred hhcccCCCCCccccchhh
Q 023260 61 AEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 61 ~~~~N~dG~Tp~dif~~~ 78 (285)
+..-|.+|+||++-.++.
T Consensus 960 l~ktd~kg~tp~eraqqa 977 (1004)
T KOG0782|consen 960 LRKTDSKGKTPQERAQQA 977 (1004)
T ss_pred heecccCCCChHHHHHhc
Confidence 566688999999866543
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=62.96 E-value=2.4 Score=44.36 Aligned_cols=24 Identities=21% Similarity=0.181 Sum_probs=20.3
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|++|+||||+|+..++.+.+
T Consensus 141 vn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 141 PTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred CCCCCCCCCCHHHHHHHCCcHHHH
Confidence 578999999999999998875443
No 86
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=61.65 E-value=78 Score=27.98 Aligned_cols=11 Identities=64% Similarity=0.896 Sum_probs=10.0
Q ss_pred CCCCCccccch
Q 023260 66 KKGLTPRALFS 76 (285)
Q Consensus 66 ~dG~Tp~dif~ 76 (285)
++|+|++|+|-
T Consensus 43 k~G~tA~~lfG 53 (206)
T PF06570_consen 43 KKGKTARQLFG 53 (206)
T ss_pred hCCCcHHHHcC
Confidence 67999999997
No 87
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=58.15 E-value=3.2 Score=31.21 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=18.5
Q ss_pred ccccCCCCchhhhhhhcCCCC
Q 023260 10 DSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+.+|..|+||||.|+..+..+
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~ 54 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLE 54 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHH
Confidence 789999999999999988643
No 88
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=57.82 E-value=6 Score=35.33 Aligned_cols=22 Identities=27% Similarity=0.234 Sum_probs=16.9
Q ss_pred ccccCCCCchhhhhhhcCCCCc
Q 023260 10 DSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+.+-++|-||||-|++-.+...
T Consensus 124 ~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 124 EAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred ccccccCccchhhhhcccchhH
Confidence 5577889999999988776544
No 89
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=50.91 E-value=9.8 Score=35.19 Aligned_cols=70 Identities=20% Similarity=0.116 Sum_probs=44.6
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccc--cchh---HHHHHHH--------HHHhhhhhhcC-cchhhcccCCCCCc
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSA---LQMQREL--------LWFQAVKKVVP-RKLAEAKNKKGLTP 71 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaa---lqm~~el--------~w~k~v~~~~~-~~~~~~~N~dG~Tp 71 (285)
+..+|.-|+.|-|||--||..|+-..+..+ +||. +-|-||- -+.+-|+-..- ..+.+..|-+|.||
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp 229 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP 229 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce
Confidence 456899999999999999999987766543 4553 3333331 12222332222 12477888999999
Q ss_pred cccc
Q 023260 72 RALF 75 (285)
Q Consensus 72 ~dif 75 (285)
.-..
T Consensus 230 LlyA 233 (296)
T KOG0502|consen 230 LLYA 233 (296)
T ss_pred eeee
Confidence 6544
No 90
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=50.72 E-value=62 Score=34.74 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=20.1
Q ss_pred hhccccCCCCchhhhhhhcCCCCcc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+...++++|=|||-|||+.|....+
T Consensus 300 l~~v~N~qgLTPLtLAaklGk~emf 324 (782)
T KOG3676|consen 300 LEHVRNNQGLTPLTLAAKLGKKEMF 324 (782)
T ss_pred cccccccCCCChHHHHHHhhhHHHH
Confidence 4456889999999999999975444
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=50.25 E-value=5.4 Score=40.35 Aligned_cols=48 Identities=19% Similarity=0.273 Sum_probs=32.6
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~di 74 (285)
++.+|-|..|+||.||..|+...++.+..+ | | + ....+|.-|.||.|=
T Consensus 532 ~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~---------~-k-----v---~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 532 LETKDYDDRTALHVAAAEGHVEVVKFLLNA---------C-K-----V---DPDPKDRWGRTPLDD 579 (622)
T ss_pred ccccccccchhheeecccCceeHHHHHHHH---------H-c-----C---CCChhhccCCCcchH
Confidence 567899999999999999986655432111 1 0 2 245566678899773
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=48.87 E-value=5.2 Score=43.09 Aligned_cols=23 Identities=26% Similarity=0.293 Sum_probs=18.1
Q ss_pred hhccccCCCCchhhhhhhcCCCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+.|.+|.-|.|+||+|+.-+...
T Consensus 44 ~anikD~~GR~alH~~~S~~k~~ 66 (1267)
T KOG0783|consen 44 LANIKDRYGRTALHIAVSENKNS 66 (1267)
T ss_pred hhhHHHhhccceeeeeeccchhH
Confidence 57888888888888888876543
No 93
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=45.73 E-value=5.7 Score=32.09 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=34.6
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|+-|=|||--|+..|+.+.++++ .|| ....+-.||.+..|-.++
T Consensus 60 i~~kDKygITPLLsAvwEGH~~cVklLL~~GA---------------------drt~~~PdG~~~~eate~ 109 (117)
T KOG4214|consen 60 IQDKDKYGITPLLSAVWEGHRDCVKLLLQNGA---------------------DRTIHAPDGTALIEATEE 109 (117)
T ss_pred cCCccccCCcHHHHHHHHhhHHHHHHHHHcCc---------------------ccceeCCCchhHHhhccH
Confidence 588999999999999999987666543 122 355666788777765443
No 94
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=42.11 E-value=8.1 Score=39.31 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=27.4
Q ss_pred CCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 16 GNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 16 GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
--|+||+||..+....+. ...+ +. .+-..+|..|+||.++-.+
T Consensus 430 tsT~LH~aa~qg~~k~v~-------------~~Le---eg---~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVK-------------YFLE---EG---CDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred cchHHHHHHhcchHHHHH-------------HHHH---hc---CCchhcccCCCCccccccc
Confidence 358999999987543321 1112 21 2456788889999888654
No 95
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=41.77 E-value=9.4 Score=40.64 Aligned_cols=25 Identities=20% Similarity=-0.001 Sum_probs=18.5
Q ss_pred hhhccccCCCCchhhhhhhcCCCCc
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
.-.|.+|-+|=|+||.|+..++...
T Consensus 40 ds~n~qd~~gfTalhha~Lng~~~i 64 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLLHHAVLNGQNQI 64 (854)
T ss_pred ccccccCccchhHHHHHHhcCchHH
Confidence 3458888888888888888776543
No 96
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=41.22 E-value=12 Score=40.98 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=19.7
Q ss_pred hccccCCCCchhhhhhhcCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
++.+|.+|.||||.|+..|+..
T Consensus 634 i~i~D~~G~tpL~wAa~~G~e~ 655 (975)
T KOG0520|consen 634 IDIRDRNGWTPLHWAAFRGREK 655 (975)
T ss_pred cccccCCCCcccchHhhcCHHH
Confidence 5789999999999999999744
No 97
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=39.23 E-value=66 Score=28.65 Aligned_cols=31 Identities=35% Similarity=0.493 Sum_probs=24.4
Q ss_pred eeeehhhhHHHHHHHHHHHHH-HhhhcCcchh
Q 023260 134 FKIFAVSNVISLVASTLSIVV-FLSLVTPRYA 164 (285)
Q Consensus 134 F~~F~i~ntiAf~~S~~aill-~lsil~sr~~ 164 (285)
=..|.++|.+|..+.+.+|.. ...|+.||+-
T Consensus 37 ~~eY~vsNiisv~Sgll~I~~GI~AIvlSrnl 68 (188)
T PF12304_consen 37 TLEYAVSNIISVTSGLLSIICGIVAIVLSRNL 68 (188)
T ss_pred eehhhHHHHHHHHHHHHHHHHhHHHHhhhccC
Confidence 346889999999999998866 5567778874
No 98
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=33.92 E-value=14 Score=34.11 Aligned_cols=52 Identities=17% Similarity=0.106 Sum_probs=36.1
Q ss_pred hhhhhccccCCCCchhhhhhhcCCCCccccc--cchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 5 ADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 5 k~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
++.-+|..|-+|-|||-+|++-++-+.+..+ +|| +....+..|.++.|+...
T Consensus 215 r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA---------------------d~t~e~dsGy~~mdlAVa 268 (296)
T KOG0502|consen 215 REVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA---------------------DVTQEDDSGYWIMDLAVA 268 (296)
T ss_pred cCCCcceeccCCCceeeeeecCChHHHHHHHHhcCC---------------------CcccccccCCcHHHHHHH
Confidence 3456789999999999999998775544322 333 456666777777776544
No 99
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=33.16 E-value=22 Score=32.16 Aligned_cols=53 Identities=15% Similarity=0.212 Sum_probs=34.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
-+|.+|.-|-|||..||..+....+..+.| |-. .+....++.|.++.++.++.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllg------rg~------------a~vgv~d~ssldaaqlaek~ 56 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLG------RGV------------AFVGVTDESSLDAAQLAEKG 56 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhc------cCc------------ccccccccccchHHHHHHhc
Confidence 479999999999999999987544322211 000 13556666677776666553
No 100
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.55 E-value=93 Score=30.49 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=25.8
Q ss_pred HHHHHHHhhhhhccCCCcchhhhHHH-HHHHHHHHHHHHHHHH-HHHHHHHhhh
Q 023260 190 MMVVFSATSFIVFTDGSTWIAILVIV-VPSVPAILFFYLHFRL-FDDILRSVFV 241 (285)
Q Consensus 190 m~vAF~~g~~~vl~~~~~~~~i~i~~-l~~~pv~~f~~lq~~l-~~~~~~~~~~ 241 (285)
.+++++.-+|=+-|+..+--++++++ .+|+..++|++.-.++ ++.+++..|+
T Consensus 198 vl~tlaivLFPLWP~~mR~gvyY~sig~~gfl~~IlvLaIvRlILF~I~~il~~ 251 (372)
T KOG2927|consen 198 VLVTLAIVLFPLWPRRMRQGVYYLSIGAGGFLAFILVLAIVRLILFGITWILTG 251 (372)
T ss_pred HHHHHHHHhcccCcHHHhcceeeeecchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44455555565556555544555554 4444444444443333 2344445555
No 101
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=30.98 E-value=19 Score=37.12 Aligned_cols=48 Identities=21% Similarity=0.172 Sum_probs=34.1
Q ss_pred cccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 11 STDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 11 ~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
..+.+|=|+||=|+-.|+...++.+- -| ..+++..|.||-||..-...
T Consensus 578 qpNdEGITaLHNAiCaghyeIVkFLi-----------~~--------ganVNa~DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 578 QPNDEGITALHNAICAGHYEIVKFLI-----------EF--------GANVNAADSDGWTPLHCAAS 625 (752)
T ss_pred CCCccchhHHhhhhhcchhHHHHHHH-----------hc--------CCcccCccCCCCchhhhhhh
Confidence 35679999999999999877765321 01 12477888899998876543
No 102
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=30.15 E-value=4e+02 Score=23.78 Aligned_cols=33 Identities=6% Similarity=0.253 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCcc
Q 023260 176 LYVGLGTLFIAIAAMMVVFSATSFIVFTDGSTW 208 (285)
Q Consensus 176 l~~~~~~l~~si~~m~vAF~~g~~~vl~~~~~~ 208 (285)
++++...+++.+-++++|||.++-+.-+...+.
T Consensus 84 imi~iAs~llP~PsLVIaYCl~mqi~~~~~~~~ 116 (189)
T PF05313_consen 84 IMIIIASLLLPFPSLVIAYCLSMQIYNPGANNN 116 (189)
T ss_pred HHHHHHHHHcCccHHHHHHHHHheeecCCCcce
Confidence 445556666677789999999998775544333
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=29.48 E-value=26 Score=35.91 Aligned_cols=21 Identities=24% Similarity=0.183 Sum_probs=18.4
Q ss_pred ccccCCCCchhhhhhhcCCCC
Q 023260 10 DSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~ 30 (285)
..+|++|+||||.|+..++..
T Consensus 82 ~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 82 SIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred cccccccccHHHHHHHcCCHH
Confidence 458999999999999999864
No 104
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=24.67 E-value=24 Score=33.90 Aligned_cols=22 Identities=23% Similarity=0.223 Sum_probs=14.7
Q ss_pred hccccCCCCchhhhhhhcCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+|.+|..|.|+|-.||..|+..
T Consensus 38 vn~~D~sGMs~LahAaykGnl~ 59 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLT 59 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHH
Confidence 4667777777777777766543
No 105
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.61 E-value=1.6e+02 Score=23.21 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=15.5
Q ss_pred eehhhhHHHHHHHHHHHHH
Q 023260 136 IFAVSNVISLVASTLSIVV 154 (285)
Q Consensus 136 ~F~i~ntiAf~~S~~aill 154 (285)
+++++|..||..|...+.+
T Consensus 15 awi~f~waafg~s~~m~~~ 33 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGL 33 (95)
T ss_pred hhHhHHHHHHHHHHHHHHH
Confidence 5788899999999877654
No 106
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=23.45 E-value=2.5e+02 Score=23.15 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 023260 177 YVGLGTLFIAIAAMMVV 193 (285)
Q Consensus 177 ~~~~~~l~~si~~m~vA 193 (285)
.|++.++++++.-|.+.
T Consensus 13 ~~al~lif~g~~vmy~g 29 (114)
T PF11023_consen 13 TFALSLIFIGMIVMYIG 29 (114)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 47788888888888764
No 107
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.44 E-value=86 Score=25.66 Aligned_cols=11 Identities=27% Similarity=0.896 Sum_probs=6.2
Q ss_pred cchhhhHHHHH
Q 023260 207 TWIAILVIVVP 217 (285)
Q Consensus 207 ~~~~i~i~~l~ 217 (285)
+|+++.|++++
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 57766554443
Done!