Query 023260
Match_columns 285
No_of_seqs 218 out of 788
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 03:49:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 97.2 6E-05 2E-09 55.5 0.4 51 9-78 28-78 (93)
2 4gpm_A Engineered protein OR26 97.1 0.00011 3.7E-09 61.4 1.0 19 60-78 128-146 (169)
3 3twr_A Tankyrase-2; ankyrin re 97.1 0.00017 5.8E-09 58.1 1.9 74 9-82 68-155 (165)
4 1s70_B 130 kDa myosin-binding 97.1 0.0002 6.9E-09 62.9 2.4 24 60-83 257-280 (299)
5 1oy3_D Transcription factor in 97.0 0.00012 4.3E-09 63.2 0.1 21 60-80 250-270 (282)
6 3aaa_C Myotrophin, protein V-1 97.0 0.00013 4.3E-09 56.3 0.1 69 9-77 33-115 (123)
7 3c5r_A BARD-1, BRCA1-associate 96.9 0.00021 7.1E-09 56.0 0.8 70 9-78 36-119 (137)
8 1dcq_A PYK2-associated protein 96.9 0.00021 7.2E-09 64.1 1.0 19 60-78 230-248 (278)
9 4b93_B Ankyrin repeat domain-c 96.9 0.00025 8.5E-09 63.1 1.2 69 9-77 145-227 (269)
10 2zgd_A 3 repeat synthetic anky 96.7 0.00036 1.2E-08 53.2 1.0 51 9-78 50-100 (110)
11 3f6q_A Integrin-linked protein 96.7 0.00063 2.1E-08 55.7 2.1 70 9-78 65-148 (179)
12 3utm_A Tankyrase-1; tankyrase, 96.6 0.0004 1.4E-08 61.7 0.8 75 9-83 240-328 (351)
13 2b0o_E UPLC1; arfgap, structur 96.6 0.00056 1.9E-08 62.1 1.4 51 9-78 219-269 (301)
14 3aji_A 26S proteasome non-ATPa 96.5 0.00064 2.2E-08 57.3 1.0 20 60-79 197-216 (231)
15 2dzn_A Probable 26S proteasome 96.5 0.00056 1.9E-08 57.4 0.5 70 9-78 133-218 (228)
16 2jab_A H10-2-G3; HER2, darpin, 96.4 0.00063 2.2E-08 53.3 0.7 23 9-31 40-62 (136)
17 3b7b_A Euchromatic histone-lys 96.4 0.0011 3.7E-08 56.1 2.0 70 9-78 137-220 (237)
18 3lvq_E ARF-GAP with SH3 domain 96.3 0.00086 2.9E-08 64.8 0.9 51 9-78 200-250 (497)
19 3v31_A Ankyrin repeat family A 96.3 0.0014 4.7E-08 52.7 2.0 19 60-78 127-145 (167)
20 1sw6_A Regulatory protein SWI6 96.3 0.00079 2.7E-08 61.2 0.5 50 9-77 276-325 (327)
21 3aaa_C Myotrophin, protein V-1 96.3 0.00078 2.7E-08 51.8 0.4 66 12-77 3-82 (123)
22 1k1a_A B-cell lymphoma 3-encod 96.3 0.00098 3.4E-08 56.2 1.0 19 60-78 208-226 (241)
23 2l6b_A NR1C; ankyrin, consensu 96.2 0.001 3.5E-08 50.3 0.9 19 60-78 67-85 (115)
24 1awc_B Protein (GA binding pro 96.2 0.0011 3.7E-08 52.8 1.0 24 9-32 60-83 (153)
25 1d9s_A Cyclin-dependent kinase 96.2 0.0009 3.1E-08 52.4 0.3 69 9-78 38-121 (136)
26 3t8k_A Uncharacterized protein 96.2 0.0033 1.1E-07 52.9 3.8 21 58-78 144-164 (186)
27 4gpm_A Engineered protein OR26 96.2 0.0011 3.6E-08 55.2 0.7 18 60-77 95-112 (169)
28 1yyh_A HN1;, notch 1, ankyrin 96.2 0.0011 3.8E-08 57.3 0.8 74 9-82 150-238 (253)
29 3deo_A Signal recognition part 96.1 0.00095 3.2E-08 55.1 0.2 70 9-78 69-153 (183)
30 3ehr_A Osteoclast-stimulating 96.1 0.00073 2.5E-08 57.2 -0.5 70 9-78 99-183 (222)
31 3v30_A DNA-binding protein rfx 96.0 0.0015 5.3E-08 52.7 1.0 70 9-78 62-145 (172)
32 1oy3_D Transcription factor in 96.0 0.0015 5.1E-08 56.4 0.9 24 8-31 1-24 (282)
33 1ihb_A P18-INK4C(INK6), cyclin 96.0 0.0014 4.8E-08 52.2 0.7 23 9-31 63-85 (162)
34 1bd8_A P19INK4D CDK4/6 inhibit 96.0 0.002 6.9E-08 51.0 1.5 22 9-30 61-82 (156)
35 1n0r_A 4ANK, 4 ankyrin repeats 95.9 0.0015 5.2E-08 49.2 0.4 19 60-78 93-111 (126)
36 4hbd_A KN motif and ankyrin re 95.9 0.0017 5.8E-08 57.5 0.7 71 8-78 175-260 (276)
37 2rfm_A Putative ankyrin repeat 95.8 0.0017 5.8E-08 53.5 0.4 70 9-78 94-177 (192)
38 1n11_A Ankyrin; clathrin, BAND 95.8 0.0023 7.8E-08 59.5 1.0 71 8-78 303-387 (437)
39 2y1l_E Darpin-8.4; hydrolase-i 95.7 0.0025 8.4E-08 51.6 1.0 24 9-32 73-96 (169)
40 1k1a_A B-cell lymphoma 3-encod 95.7 0.0039 1.3E-07 52.5 2.0 55 8-77 1-55 (241)
41 1ikn_D Protein (I-kappa-B-alph 95.6 0.0037 1.3E-07 53.0 1.7 71 8-78 109-194 (236)
42 1ycs_B 53BP2, P53BP2; ankyrin 95.6 0.0025 8.4E-08 54.9 0.5 24 9-32 63-86 (239)
43 2fo1_E LIN-12 protein; beta-ba 95.6 0.0026 8.8E-08 58.7 0.5 19 60-78 338-356 (373)
44 2jab_A H10-2-G3; HER2, darpin, 95.6 0.0023 7.7E-08 50.1 0.1 17 13-29 11-27 (136)
45 1bi7_B P16INK4A, MTS1, multipl 95.5 0.0019 6.4E-08 51.7 -0.4 19 60-78 103-121 (156)
46 1ycs_B 53BP2, P53BP2; ankyrin 95.5 0.002 6.7E-08 55.6 -0.3 16 14-29 35-50 (239)
47 1d9s_A Cyclin-dependent kinase 95.5 0.0041 1.4E-07 48.5 1.6 50 9-77 5-54 (136)
48 2rfm_A Putative ankyrin repeat 95.5 0.0029 1E-07 52.0 0.8 53 6-77 25-77 (192)
49 2rfa_A Transient receptor pote 95.5 0.0032 1.1E-07 53.0 1.0 17 62-78 191-207 (232)
50 3c5r_A BARD-1, BRCA1-associate 95.5 0.0019 6.6E-08 50.3 -0.4 67 11-77 5-85 (137)
51 4b93_B Ankyrin repeat domain-c 95.5 0.0044 1.5E-07 54.9 1.8 25 9-33 79-103 (269)
52 2etb_A Transient receptor pote 95.4 0.0026 8.7E-08 54.8 0.0 20 8-27 164-183 (256)
53 3ui2_A Signal recognition part 95.4 0.003 1E-07 54.9 0.4 69 9-77 70-153 (244)
54 3jxi_A Vanilloid receptor-rela 95.4 0.008 2.8E-07 51.6 3.0 68 8-78 168-235 (260)
55 1sw6_A Regulatory protein SWI6 95.3 0.0033 1.1E-07 57.0 0.4 24 9-32 123-147 (327)
56 1awc_B Protein (GA binding pro 95.3 0.0031 1E-07 50.1 0.1 66 12-77 30-109 (153)
57 2xai_A ASB-9, ankyrin repeat a 95.3 0.0038 1.3E-07 54.3 0.7 69 9-77 127-208 (261)
58 1bi7_B P16INK4A, MTS1, multipl 95.3 0.0026 9.1E-08 50.9 -0.3 65 9-73 70-149 (156)
59 3twr_A Tankyrase-2; ankyrin re 95.3 0.0035 1.2E-07 50.2 0.4 70 8-77 34-117 (165)
60 3ljn_A Hypothetical protein; a 95.3 0.0035 1.2E-07 56.9 0.3 19 60-78 236-254 (364)
61 3hra_A Ankyrin repeat family p 95.2 0.0046 1.6E-07 50.8 1.0 19 60-78 170-188 (201)
62 3deo_A Signal recognition part 95.2 0.0034 1.1E-07 51.7 0.1 23 10-32 38-60 (183)
63 2vge_A RELA-associated inhibit 95.2 0.0069 2.3E-07 52.3 2.0 24 9-32 47-70 (229)
64 3f6q_A Integrin-linked protein 95.1 0.0041 1.4E-07 50.6 0.4 70 8-77 31-114 (179)
65 3t8k_A Uncharacterized protein 95.1 0.006 2.1E-07 51.3 1.4 55 9-77 68-124 (186)
66 3d9h_A CDNA FLJ77766, highly s 95.1 0.0063 2.2E-07 53.8 1.4 69 9-77 183-264 (285)
67 2l6b_A NR1C; ankyrin, consensu 95.1 0.0048 1.6E-07 46.5 0.5 23 9-31 35-57 (115)
68 3ehr_A Osteoclast-stimulating 95.0 0.0045 1.5E-07 52.3 0.4 72 6-77 63-149 (222)
69 1yyh_A HN1;, notch 1, ankyrin 95.0 0.0042 1.4E-07 53.6 0.2 70 8-77 116-199 (253)
70 2f8y_A Notch homolog 1, transl 95.0 0.0052 1.8E-07 51.3 0.7 70 9-78 118-201 (223)
71 4hbd_A KN motif and ankyrin re 95.0 0.0056 1.9E-07 54.1 1.0 53 6-76 101-153 (276)
72 1ihb_A P18-INK4C(INK6), cyclin 95.0 0.0044 1.5E-07 49.2 0.1 68 9-77 31-112 (162)
73 3jue_A Arfgap with coiled-coil 95.0 0.0053 1.8E-07 57.8 0.7 19 60-78 293-311 (368)
74 4g8k_A 2-5A-dependent ribonucl 94.9 0.0045 1.5E-07 55.5 0.1 49 9-77 232-282 (337)
75 3utm_A Tankyrase-1; tankyrase, 94.9 0.0051 1.7E-07 54.5 0.4 22 8-29 203-224 (351)
76 1wdy_A 2-5A-dependent ribonucl 94.8 0.0061 2.1E-07 52.1 0.5 19 59-77 244-262 (285)
77 2vge_A RELA-associated inhibit 94.7 0.0062 2.1E-07 52.6 0.4 21 10-30 15-35 (229)
78 3ui2_A Signal recognition part 94.7 0.0059 2E-07 53.0 0.2 68 10-77 39-120 (244)
79 2dzn_A Probable 26S proteasome 94.7 0.0057 2E-07 51.1 0.1 70 8-77 99-183 (228)
80 2y1l_E Darpin-8.4; hydrolase-i 94.6 0.0072 2.5E-07 48.8 0.4 24 9-32 40-63 (169)
81 2pnn_A Transient receptor pote 94.5 0.015 5E-07 50.5 2.4 20 9-28 177-196 (273)
82 3v30_A DNA-binding protein rfx 94.5 0.0072 2.5E-07 48.6 0.3 51 8-77 28-78 (172)
83 2f8y_A Notch homolog 1, transl 94.5 0.0081 2.8E-07 50.1 0.5 70 8-77 84-167 (223)
84 3hra_A Ankyrin repeat family p 94.5 0.0069 2.4E-07 49.7 0.1 24 8-31 31-54 (201)
85 2rfa_A Transient receptor pote 94.4 0.0071 2.4E-07 50.9 0.1 50 10-78 115-164 (232)
86 3v31_A Ankyrin repeat family A 94.4 0.0084 2.9E-07 48.0 0.4 51 8-77 28-78 (167)
87 1ikn_D Protein (I-kappa-B-alph 94.3 0.0093 3.2E-07 50.5 0.6 22 10-31 2-23 (236)
88 2xai_A ASB-9, ankyrin repeat a 94.2 0.008 2.7E-07 52.2 -0.0 50 9-77 29-78 (261)
89 1n11_A Ankyrin; clathrin, BAND 94.2 0.014 4.9E-07 54.0 1.6 24 9-32 271-294 (437)
90 1s70_B 130 kDa myosin-binding 94.0 0.011 3.6E-07 51.7 0.4 23 9-31 66-88 (299)
91 1n0r_A 4ANK, 4 ankyrin repeats 93.9 0.01 3.5E-07 44.5 0.1 50 9-77 28-77 (126)
92 1n0q_A 3ANK, 3 ankyrin repeats 93.9 0.0097 3.3E-07 43.3 -0.1 23 9-31 61-83 (93)
93 3eu9_A Huntingtin-interacting 93.9 0.011 3.9E-07 49.2 0.2 70 9-78 135-220 (240)
94 3b7b_A Euchromatic histone-lys 93.8 0.011 3.7E-07 49.8 0.0 23 9-31 4-26 (237)
95 1dcq_A PYK2-associated protein 93.8 0.0095 3.2E-07 53.2 -0.4 53 9-77 162-214 (278)
96 2fo1_E LIN-12 protein; beta-ba 93.6 0.013 4.3E-07 54.0 -0.0 24 9-32 159-182 (373)
97 3d9h_A CDNA FLJ77766, highly s 93.5 0.012 4.2E-07 51.9 -0.2 69 9-77 52-134 (285)
98 3aji_A 26S proteasome non-ATPa 92.8 0.019 6.5E-07 48.1 -0.0 69 9-77 99-181 (231)
99 2zgd_A 3 repeat synthetic anky 92.8 0.01 3.5E-07 44.8 -1.7 52 7-77 15-66 (110)
100 3jxi_A Vanilloid receptor-rela 92.5 0.042 1.5E-06 47.0 1.7 48 14-77 138-185 (260)
101 3kea_A K1L; tropism, ANK repea 92.1 0.026 9E-07 49.8 -0.1 18 60-77 120-138 (285)
102 2etb_A Transient receptor pote 92.1 0.026 8.9E-07 48.3 -0.1 46 16-77 136-181 (256)
103 4g8k_A 2-5A-dependent ribonucl 92.0 0.028 9.7E-07 50.2 -0.0 25 8-32 265-289 (337)
104 2pnn_A Transient receptor pote 92.0 0.046 1.6E-06 47.3 1.3 48 14-77 146-193 (273)
105 3ljn_A Hypothetical protein; a 91.8 0.037 1.3E-06 50.0 0.5 17 61-77 204-220 (364)
106 1wdy_A 2-5A-dependent ribonucl 91.2 0.039 1.3E-06 47.0 -0.0 24 9-32 31-55 (285)
107 1bd8_A P19INK4D CDK4/6 inhibit 90.9 0.036 1.2E-06 43.5 -0.5 50 9-78 94-143 (156)
108 3jue_A Arfgap with coiled-coil 89.6 0.072 2.5E-06 49.9 0.3 50 9-77 226-277 (368)
109 3lvq_E ARF-GAP with SH3 domain 88.2 0.082 2.8E-06 50.8 -0.4 50 13-78 168-217 (497)
110 2b0o_E UPLC1; arfgap, structur 88.1 0.075 2.6E-06 47.9 -0.7 50 12-77 186-235 (301)
111 3eu9_A Huntingtin-interacting 87.9 0.11 3.8E-06 43.0 0.3 17 60-76 134-150 (240)
112 3kea_A K1L; tropism, ANK repea 84.8 0.17 5.9E-06 44.5 -0.1 24 9-32 24-47 (285)
113 2aja_A Ankyrin repeat family p 49.6 1 3.5E-05 42.1 -3.7 22 12-33 194-216 (376)
114 2aja_A Ankyrin repeat family p 37.9 8.4 0.00029 35.7 0.6 24 11-34 314-337 (376)
115 2l8s_A Integrin alpha-1; trans 33.3 55 0.0019 22.4 4.0 14 205-218 6-19 (54)
116 2knc_A Integrin alpha-IIB; tra 27.5 82 0.0028 21.5 4.1 13 206-218 10-22 (54)
117 2k1a_A Integrin alpha-IIB; sin 24.0 1.3E+02 0.0044 19.4 4.4 12 237-248 29-40 (42)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=97.21 E-value=6e-05 Score=55.52 Aligned_cols=51 Identities=27% Similarity=0.407 Sum_probs=36.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.++.+ ++. ....+.+|++|.||.+.....
T Consensus 28 ~n~~d~~g~t~L~~A~~~~~~~~v~~L----------------l~~---ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLL----------------LEA---GADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHH----------------HHT---TCCTTCCCTTSCCHHHHHHHT
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHH----------------HHc---CCCCCccCCCCCCHHHHHHHc
Confidence 588999999999999998864433211 111 124678899999998876543
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=97.10 E-value=0.00011 Score=61.38 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=14.6
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|++|.||.++..+.
T Consensus 128 d~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 128 DVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CccccCCCCCCHHHHHHHc
Confidence 4677889999998887543
No 3
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=97.07 E-value=0.00017 Score=58.07 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=41.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.++.+ .| .++.....-...+-|+..+. ....+.+|++|.||.++
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 147 (165)
T 3twr_A 68 VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 147 (165)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGG
T ss_pred CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHh
Confidence 577888888888888888765433211 01 12222111111111222111 12467889999999999
Q ss_pred chhhhhhh
Q 023260 75 FSEQHRDL 82 (285)
Q Consensus 75 f~~~h~~l 82 (285)
..+.+.+.
T Consensus 148 a~~~~~~i 155 (165)
T 3twr_A 148 VKDGDTDI 155 (165)
T ss_dssp SCTTCHHH
T ss_pred HhcCChHH
Confidence 87655543
No 4
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.06 E-value=0.0002 Score=62.89 Aligned_cols=24 Identities=29% Similarity=0.104 Sum_probs=18.5
Q ss_pred hhhcccCCCCCccccchhhhhhhH
Q 023260 60 LAEAKNKKGLTPRALFSEQHRDLK 83 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~h~~l~ 83 (285)
..+.+|++|+||.++..++..+..
T Consensus 257 d~~~~d~~g~t~l~~A~~~~~~~l 280 (299)
T 1s70_B 257 DMEAVNKVGQTAFDVADEDILGYL 280 (299)
T ss_dssp CTTCCCTTSCCTTTSCCSGGGHHH
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHH
Confidence 467889999999999977654443
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=96.96 E-value=0.00012 Score=63.25 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=4.1
Q ss_pred hhhcccCCCCCccccchhhhh
Q 023260 60 LAEAKNKKGLTPRALFSEQHR 80 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~h~ 80 (285)
....+|++|.||.+...++..
T Consensus 250 ~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 250 PEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCCCCC---------------
T ss_pred CcCcCCCcccccccccCCccc
Confidence 366788889999888766544
No 6
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=96.96 E-value=0.00013 Score=56.32 Aligned_cols=69 Identities=20% Similarity=0.137 Sum_probs=38.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.++.+ .| .++....+-...+-|+..+. ....+.+|++|.||.++
T Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 112 (123)
T 3aaa_C 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEA 112 (123)
T ss_dssp TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 577888888888888887765433211 01 12322221111122222221 22367889999999987
Q ss_pred chh
Q 023260 75 FSE 77 (285)
Q Consensus 75 f~~ 77 (285)
..+
T Consensus 113 A~~ 115 (123)
T 3aaa_C 113 TDN 115 (123)
T ss_dssp CCC
T ss_pred hCC
Confidence 743
No 7
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=96.89 E-value=0.00021 Score=56.00 Aligned_cols=70 Identities=20% Similarity=0.155 Sum_probs=39.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.++.+ . | .++....+-...+-|+.++. ....+.+|.+|.||.++
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 115 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY 115 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 567888888888888888765443221 0 1 12222111111122222221 22467889999999998
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
..++
T Consensus 116 A~~~ 119 (137)
T 3c5r_A 116 TDDE 119 (137)
T ss_dssp CCCH
T ss_pred Hhhc
Confidence 8654
No 8
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=96.89 E-value=0.00021 Score=64.10 Aligned_cols=19 Identities=26% Similarity=0.272 Sum_probs=14.9
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|++|.||.++....
T Consensus 230 d~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 230 SIEIANESGETPLDIAKRL 248 (278)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CCCCccCCCCCHHHHHHHc
Confidence 4678899999998887553
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=96.87 E-value=0.00025 Score=63.14 Aligned_cols=69 Identities=17% Similarity=0.092 Sum_probs=40.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--cc-----------hhHHHHHHHHHHhhhhhhcCc-chhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~g-----------aalqm~~el~w~k~v~~~~~~-~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|++.++.+.+..+ .| .+|..-.+-...+-|+-++.. ...+.+|++|+||.++
T Consensus 145 ~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 224 (269)
T 4b93_B 145 PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDC 224 (269)
T ss_dssp SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGG
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 577888899999999888876554322 11 122221111111223222221 2467889999999998
Q ss_pred chh
Q 023260 75 FSE 77 (285)
Q Consensus 75 f~~ 77 (285)
..+
T Consensus 225 A~~ 227 (269)
T 4b93_B 225 AEQ 227 (269)
T ss_dssp SCT
T ss_pred HHh
Confidence 854
No 10
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=96.72 E-value=0.00036 Score=53.17 Aligned_cols=51 Identities=22% Similarity=0.290 Sum_probs=31.3
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.++. + ++. ....+.+|.+|.||.++....
T Consensus 50 i~~~d~~g~tpLh~A~~~~~~~~v~~--------------L--l~~---ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 50 VAAKDKNGSTPLHLAARNGHLEVVKL--------------L--LEA---GADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHH--------------H--HHT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHH--------------H--HHc---CCCccccccCCCcHHHHHHHc
Confidence 46677777777777777765332211 1 111 124667888999998876543
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=96.66 E-value=0.00063 Score=55.65 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=38.3
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ .| .+++....-.-.+-|+..+. ....+.+|++|.||.++
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 144 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK 144 (179)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGG
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHH
Confidence 567788888888888887765433211 01 12222111111111222111 22467789999999998
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
..+.
T Consensus 145 A~~~ 148 (179)
T 3f6q_A 145 AKAP 148 (179)
T ss_dssp SCHH
T ss_pred HHHH
Confidence 8654
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=96.64 E-value=0.0004 Score=61.72 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=42.5
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|++.++.+.++.+ . | .+++.-.+-...+-|+-++. .......|++|.||.++
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~ 319 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQM 319 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 578899999999999998875543322 1 1 12333221111222222221 12467788999999888
Q ss_pred chhhhhhhH
Q 023260 75 FSEQHRDLK 83 (285)
Q Consensus 75 f~~~h~~l~ 83 (285)
..++..++.
T Consensus 320 a~~~~~~~l 328 (351)
T 3utm_A 320 GNEAVQQIL 328 (351)
T ss_dssp SCHHHHHHH
T ss_pred hhHHHHHHH
Confidence 765544443
No 13
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=96.58 E-value=0.00056 Score=62.10 Aligned_cols=51 Identities=29% Similarity=0.469 Sum_probs=33.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.++.+ ++. ....+.+|++|.||.++....
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~L----------------l~~---gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLL----------------LKG---RALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHH----------------HHT---TCCCSCCCTTSCCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHH----------------HHc---CCCCCCcCCCCCCHHHHHHHc
Confidence 466778888888888877754333211 111 124678899999999987653
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=96.47 E-value=0.00064 Score=57.31 Aligned_cols=20 Identities=20% Similarity=0.064 Sum_probs=15.5
Q ss_pred hhhcccCCCCCccccchhhh
Q 023260 60 LAEAKNKKGLTPRALFSEQH 79 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~h 79 (285)
..+.+|++|+||.++..+.+
T Consensus 197 ~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 197 SIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp CSCCCCTTSCCHHHHSCHHH
T ss_pred CCCCCCCCCCCHHHHHHhhH
Confidence 35678999999999886543
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=96.45 E-value=0.00056 Score=57.40 Aligned_cols=70 Identities=16% Similarity=0.058 Sum_probs=36.7
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--cc------------hhHHHHHHHHHHhhhhhhc--CcchhhcccCCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--SG------------SALQMQRELLWFQAVKKVV--PRKLAEAKNKKGLTPR 72 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~g------------aalqm~~el~w~k~v~~~~--~~~~~~~~N~dG~Tp~ 72 (285)
+|.+|.+|+||||+|++.++.+.++.+ .| .++..-.+-.-.+-|+..+ .....+.+|++|+||.
T Consensus 133 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l 212 (228)
T 2dzn_A 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAE 212 (228)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGG
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHH
Confidence 466777777777777776654332211 11 1222211111111122222 1335778999999999
Q ss_pred ccchhh
Q 023260 73 ALFSEQ 78 (285)
Q Consensus 73 dif~~~ 78 (285)
++..++
T Consensus 213 ~~A~~~ 218 (228)
T 2dzn_A 213 DVALNE 218 (228)
T ss_dssp GGCSST
T ss_pred HHHHHH
Confidence 988653
No 16
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=96.44 E-value=0.00063 Score=53.32 Aligned_cols=23 Identities=26% Similarity=0.172 Sum_probs=17.5
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||+|+..++.+.
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~ 62 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEI 62 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHH
Confidence 56788888888888888776543
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=96.41 E-value=0.0011 Score=56.14 Aligned_cols=70 Identities=26% Similarity=0.247 Sum_probs=38.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.++.+ .| .+++...+-...+-++..+. ....+.+|++|.||.++
T Consensus 137 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 216 (237)
T 3b7b_A 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQC 216 (237)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 467788888888888887764433211 01 12322111111111222211 22467789999999998
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
....
T Consensus 217 A~~~ 220 (237)
T 3b7b_A 217 ASLN 220 (237)
T ss_dssp SCTT
T ss_pred HHHH
Confidence 8654
No 18
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=96.31 E-value=0.00086 Score=64.84 Aligned_cols=51 Identities=29% Similarity=0.466 Sum_probs=35.4
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|+..++.+.++.+ ++ .....+.+|++|.||.++....
T Consensus 200 vn~~d~~g~TpLh~A~~~g~~~~v~~L----------------l~---~ga~~~~~d~~g~tpl~~A~~~ 250 (497)
T 3lvq_E 200 LDAKAADGNTALHYAALYNQPDCLKLL----------------LK---GRALVGTVNEAGETALDIARKK 250 (497)
T ss_dssp TTCCCSSSCCHHHHHTTTTCHHHHHHH----------------HH---TCCCCSCCCTTCCCHHHHHHHT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHH----------------HH---cCCCCCCcCCCCCCHHHHHHHc
Confidence 577888888888888888765443321 11 1224678899999999987543
No 19
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=96.30 E-value=0.0014 Score=52.73 Aligned_cols=19 Identities=11% Similarity=0.043 Sum_probs=14.5
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
....+|++|.||.++....
T Consensus 127 ~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 127 DPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHc
Confidence 3567888999998887654
No 20
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=96.28 E-value=0.00079 Score=61.16 Aligned_cols=50 Identities=20% Similarity=0.320 Sum_probs=36.6
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||+|++.++.+.++.+ ++. ....+.+|++|.||.++..+
T Consensus 276 ~n~~d~~G~TpLh~A~~~g~~~~v~~L----------------l~~---Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 276 LNAQDSNGDTCLNIAARLGNISIVDAL----------------LDY---GADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHH----------------HHT---TCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHH----------------HHc---CCCCcccCCCCCCHHHHHHh
Confidence 899999999999999998875443321 011 12478899999999987643
No 21
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=96.28 E-value=0.00078 Score=51.76 Aligned_cols=66 Identities=14% Similarity=0.038 Sum_probs=34.0
Q ss_pred ccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccchh
Q 023260 12 TDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 12 ~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif~~ 77 (285)
.|..|+||||.|++.++.+.+..+ .| .++.....-.-.+-|+..+. ....+.+|++|.||......
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 467899999999999975543211 11 12322211111122222222 22466788999999886644
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=96.26 E-value=0.00098 Score=56.25 Aligned_cols=19 Identities=21% Similarity=0.099 Sum_probs=15.4
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|++|.||.++..+.
T Consensus 208 ~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 208 DSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp CTTCCCTTSCCTTTTCSSH
T ss_pred CCCCcCCCCCCHHHHHHhc
Confidence 4677899999999987654
No 23
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=96.24 E-value=0.001 Score=50.30 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=14.6
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|.+|.||.++....
T Consensus 67 ~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 67 DVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp CTTCCCTTCCCTTHHHHTT
T ss_pred CCcccCCCCCCHHHHHHHC
Confidence 3667889999998876543
No 24
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=96.23 E-value=0.0011 Score=52.77 Aligned_cols=24 Identities=17% Similarity=0.185 Sum_probs=17.7
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 60 ~~~~~~~g~t~L~~A~~~~~~~~v 83 (153)
T 1awc_B 60 RDARTKVDRTPLHMAASEGHANIV 83 (153)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcChHHHH
Confidence 467788888888888887765443
No 25
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=96.20 E-value=0.0009 Score=52.43 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=35.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------c-ch-hHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------S-GS-ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~-ga-alqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+|+||||+|+. ++.+.++.+ . |. +++.-..-...+-|+..+. ....+.+|++|.||.+
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVD 116 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHH
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 46677888888888887 654332211 1 11 2322111111111222111 1235677889999988
Q ss_pred cchhh
Q 023260 74 LFSEQ 78 (285)
Q Consensus 74 if~~~ 78 (285)
+....
T Consensus 117 ~A~~~ 121 (136)
T 1d9s_A 117 LAEEQ 121 (136)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 76543
No 26
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=96.18 E-value=0.0033 Score=52.92 Aligned_cols=21 Identities=24% Similarity=0.113 Sum_probs=17.0
Q ss_pred cchhhcccCCCCCccccchhh
Q 023260 58 RKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 58 ~~~~~~~N~dG~Tp~dif~~~ 78 (285)
....+.+|++|+||.++..+.
T Consensus 144 gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 144 GLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp TCCTTCCCTTSCCHHHHHHTT
T ss_pred CCCCcccCCCCCCHHHHHHHc
Confidence 345788999999999988664
No 27
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=96.17 E-value=0.0011 Score=55.23 Aligned_cols=18 Identities=33% Similarity=0.324 Sum_probs=13.8
Q ss_pred hhhcccCCCCCccccchh
Q 023260 60 LAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~ 77 (285)
..+.+|++|.||......
T Consensus 95 dvn~~d~~G~TpLh~A~~ 112 (169)
T 4gpm_A 95 DVNAKDSDGRTPLHHAAE 112 (169)
T ss_dssp CTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHH
Confidence 467889999999876543
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=96.15 E-value=0.0011 Score=57.30 Aligned_cols=74 Identities=20% Similarity=0.292 Sum_probs=41.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ . | .++..-.+-.-.+-|+.++. ....+.+|++|+||.++
T Consensus 150 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 229 (253)
T 1yyh_A 150 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 229 (253)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHH
Confidence 577888999999999988865443221 1 1 12322211111111222111 12366789999999998
Q ss_pred chhh-hhhh
Q 023260 75 FSEQ-HRDL 82 (285)
Q Consensus 75 f~~~-h~~l 82 (285)
..+. |.+.
T Consensus 230 A~~~g~~~i 238 (253)
T 1yyh_A 230 AQERMHHDI 238 (253)
T ss_dssp HHHTTCHHH
T ss_pred HHHcCCHHH
Confidence 7654 3443
No 29
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=96.14 E-value=0.00095 Score=55.10 Aligned_cols=70 Identities=26% Similarity=0.370 Sum_probs=37.8
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc-------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV-------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~-------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+|+||||+|+..++.+.++.+ .| .++.....-...+-|+..+. ....+.+|.+|.||.+
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 148 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALE 148 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHH
Confidence 577888888888888887764432211 11 12322111111111221111 1246778999999998
Q ss_pred cchhh
Q 023260 74 LFSEQ 78 (285)
Q Consensus 74 if~~~ 78 (285)
+..+.
T Consensus 149 ~A~~~ 153 (183)
T 3deo_A 149 LAREI 153 (183)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87553
No 30
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=96.13 E-value=0.00073 Score=57.19 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=39.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c-c-----------hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S-G-----------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~-g-----------aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+|+||||+|+..++.+.++.+ . | .+|....+-...+-|+.++. ....+.+|.+|.||.+
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 178 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFD 178 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHH
Confidence 567888888888888887765433221 0 1 12322221111222222221 1246788999999999
Q ss_pred cchhh
Q 023260 74 LFSEQ 78 (285)
Q Consensus 74 if~~~ 78 (285)
+....
T Consensus 179 ~A~~~ 183 (222)
T 3ehr_A 179 MATNA 183 (222)
T ss_dssp HCCSH
T ss_pred Hhcch
Confidence 87653
No 31
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=96.03 E-value=0.0015 Score=52.69 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=36.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ .| .++.....-...+-|+..+. ....+.+|++|.||.++
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 141 (172)
T 3v30_A 62 PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDL 141 (172)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 466777888888888877764433211 01 12222111111111221111 12467788999999988
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
....
T Consensus 142 A~~~ 145 (172)
T 3v30_A 142 AVAL 145 (172)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=96.03 E-value=0.0015 Score=56.36 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=20.3
Q ss_pred hhccccCCCCchhhhhhhcCCCCc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
++|.+|.+|+||||+|++.++...
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~ 24 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPF 24 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCCccCCCCCcHHHHHHHcCCHHH
Confidence 468899999999999999887543
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=96.02 E-value=0.0014 Score=52.16 Aligned_cols=23 Identities=26% Similarity=0.276 Sum_probs=16.1
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||.|++.++.+.
T Consensus 63 ~~~~~~~g~t~L~~A~~~~~~~~ 85 (162)
T 1ihb_A 63 PDLKDRTGFAVIHDAARAGFLDT 85 (162)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHH
Confidence 46677778888888877776443
No 34
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=95.99 E-value=0.002 Score=51.00 Aligned_cols=22 Identities=23% Similarity=0.241 Sum_probs=14.7
Q ss_pred hccccCCCCchhhhhhhcCCCC
Q 023260 9 VDSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+|.+|.+|+||||.|+..++.+
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~ 82 (156)
T 1bd8_A 61 PNVQDTSGTSPVHDAARTGFLD 82 (156)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHH
Confidence 4566777777777777766543
No 35
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=95.91 E-value=0.0015 Score=49.20 Aligned_cols=19 Identities=37% Similarity=0.426 Sum_probs=14.4
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
....+|.+|.||.++....
T Consensus 93 ~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 93 DVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CCcccCCCCCCHHHHHHHc
Confidence 3567889999999877543
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=95.89 E-value=0.0017 Score=57.49 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=38.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC--cchhhcccCCCCCcc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP--RKLAEAKNKKGLTPR 72 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~--~~~~~~~N~dG~Tp~ 72 (285)
..+..|.+|+||||+|+..++.+.++.+ . | .+|..-.+-.-.+-|+.++. ....+.+|++|.||.
T Consensus 175 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 175 INAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 3456677777888887777764433221 0 1 12322221111222333332 345677899999998
Q ss_pred ccchhh
Q 023260 73 ALFSEQ 78 (285)
Q Consensus 73 dif~~~ 78 (285)
++..+.
T Consensus 255 ~~A~~~ 260 (276)
T 4hbd_A 255 MVALDA 260 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 877554
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=95.84 E-value=0.0017 Score=53.52 Aligned_cols=70 Identities=20% Similarity=0.151 Sum_probs=37.2
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ . | .++.....-...+-|+..+. ....+.+|.+|.||.++
T Consensus 94 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 173 (192)
T 2rfm_A 94 VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEAS 173 (192)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 567888888888888887765443221 0 1 12222111111122222211 12366778889999887
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
....
T Consensus 174 A~~~ 177 (192)
T 2rfm_A 174 ARIF 177 (192)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6543
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=95.77 E-value=0.0023 Score=59.53 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=38.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--cc-----------hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~g-----------aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
.+|.+|.+|+||||+|+..++.+.++.+ .| .+++.-.+-...+-|+-.+. ....+.+|++|.||.+
T Consensus 303 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~ 382 (437)
T 1n11_A 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 382 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHH
T ss_pred cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence 3577888999999999988876554322 11 12222111011111211111 1235667888888888
Q ss_pred cchhh
Q 023260 74 LFSEQ 78 (285)
Q Consensus 74 if~~~ 78 (285)
+..+.
T Consensus 383 ~A~~~ 387 (437)
T 1n11_A 383 IAKRL 387 (437)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 77553
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=95.73 E-value=0.0025 Score=51.64 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=17.8
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 73 ~~~~~~~g~t~L~~A~~~~~~~~~ 96 (169)
T 2y1l_E 73 VNAVDHAGMTPLRLAALFGHLEIV 96 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHH
Confidence 467788888888888887765443
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=95.67 E-value=0.0039 Score=52.50 Aligned_cols=55 Identities=20% Similarity=0.199 Sum_probs=31.5
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
++|.+|.+|+||||+|++.++.+.+..+ +.++.+ .+...+..|.+|.||......
T Consensus 1 l~~~~d~~g~t~L~~A~~~g~~~~v~~L----------l~~~~~-----~~~~~~~~~~~g~t~L~~A~~ 55 (241)
T 1k1a_A 1 MATRADEDGDTPLHIAVVQGNLPAVHRL----------VNLFQQ-----GGRELDIYNNLRQTPLHLAVI 55 (241)
T ss_dssp ------CTTCCHHHHHHHTTCHHHHHHH----------HHHHHH-----TTCCSCCCCTTSCCHHHHHHH
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHH----------HHHHHh-----cCCCCCcccccCCCHHHHHHH
Confidence 4689999999999999999874432211 111110 223467778889999776644
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=95.62 E-value=0.0037 Score=53.05 Aligned_cols=71 Identities=20% Similarity=0.246 Sum_probs=40.5
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc-------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV-------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPR 72 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~-------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~ 72 (285)
+++.+|.+|+||||+|+..++.+.+..+ .| .++..-.+-...+-|+.++. ....+.+|.+|.||.
T Consensus 109 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 109 ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 188 (236)
T ss_dssp GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGG
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHH
Confidence 4688888899999999888865443221 11 12332211111122222222 224677889999999
Q ss_pred ccchhh
Q 023260 73 ALFSEQ 78 (285)
Q Consensus 73 dif~~~ 78 (285)
++....
T Consensus 189 ~~A~~~ 194 (236)
T 1ikn_D 189 QLTWGR 194 (236)
T ss_dssp GGCTTS
T ss_pred HHHHcc
Confidence 987654
No 42
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=95.59 E-value=0.0025 Score=54.93 Aligned_cols=24 Identities=21% Similarity=0.138 Sum_probs=17.9
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 63 ~~~~d~~g~t~L~~A~~~g~~~~v 86 (239)
T 1ycs_B 63 PSLPNDEGITALHNAVCAGHTEIV 86 (239)
T ss_dssp CCCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHH
Confidence 567788888888888888765443
No 43
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=95.56 E-value=0.0026 Score=58.73 Aligned_cols=19 Identities=26% Similarity=0.218 Sum_probs=14.7
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+..|++|.||.++..+.
T Consensus 338 d~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 338 SVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CSSCCCSSSCCHHHHHHHT
T ss_pred CccCCCCCCCCHHHHHHHc
Confidence 4667889999999887553
No 44
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=95.56 E-value=0.0023 Score=50.07 Aligned_cols=17 Identities=12% Similarity=0.026 Sum_probs=8.4
Q ss_pred cCCCCchhhhhhhcCCC
Q 023260 13 DGEGNNILHLAGKLAPP 29 (285)
Q Consensus 13 D~~GNT~LHLAa~~~~~ 29 (285)
+..|.||||.|++.++.
T Consensus 11 ~~~~~t~l~~A~~~g~~ 27 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQD 27 (136)
T ss_dssp -CHHHHHHHHHHHHTCH
T ss_pred cccccHHHHHHHHhCCH
Confidence 34455555555555543
No 45
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=95.55 E-value=0.0019 Score=51.75 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=14.6
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|.+|.||.++....
T Consensus 103 ~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 103 RLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp CSSCCCTTCCCHHHHHHHH
T ss_pred CCcccCCCCCCHHHHHHHh
Confidence 3567889999998877543
No 46
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=95.54 E-value=0.002 Score=55.56 Aligned_cols=16 Identities=6% Similarity=-0.321 Sum_probs=8.1
Q ss_pred CCCCchhhhhhhcCCC
Q 023260 14 GEGNNILHLAGKLAPP 29 (285)
Q Consensus 14 ~~GNT~LHLAa~~~~~ 29 (285)
..|.||||.|+..++.
T Consensus 35 ~~~~t~L~~A~~~g~~ 50 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEF 50 (239)
T ss_dssp --CHHHHHHHHHHTCH
T ss_pred chhhHHHHHHHHcCCH
Confidence 4455666666665543
No 47
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=95.54 E-value=0.0041 Score=48.52 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=35.0
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||+|++.++.+.++. + ++. ....+.+|.+|.||......
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~--------------L--l~~---g~~~~~~~~~g~t~L~~A~~ 54 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQ--------------L--LEA---GADPNALNRFGRRPIQVMMM 54 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHH--------------H--HHT---TCCTTCCCTTCCTTTTTSTT
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHH--------------H--HHc---CCCcCCcCCCCCCHHHHHHc
Confidence 58999999999999999986433221 1 111 12356778899999887654
No 48
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=95.54 E-value=0.0029 Score=52.04 Aligned_cols=53 Identities=21% Similarity=0.192 Sum_probs=35.9
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+.++|.+|.+|+||||+|+..++.+.+..+ ++. ....+..|.+|.||......
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~L----------------l~~---~~~~~~~~~~g~t~L~~A~~ 77 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKL----------------VEN---FDKLEDKDIEGSTALIWAVK 77 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHH----------------HHH---HCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHH----------------HHh---ccccccccccCccHHHHHHH
Confidence 457899999999999999999875543221 011 11345667788888766543
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=95.52 E-value=0.0032 Score=53.03 Aligned_cols=17 Identities=35% Similarity=0.428 Sum_probs=14.1
Q ss_pred hcccCCCCCccccchhh
Q 023260 62 EAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 62 ~~~N~dG~Tp~dif~~~ 78 (285)
..+|++|.||.++..+.
T Consensus 191 ~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 191 LVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp GCCCTTSCCHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHc
Confidence 57899999999987654
No 50
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=95.51 E-value=0.0019 Score=50.33 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=36.8
Q ss_pred cccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccch
Q 023260 11 STDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFS 76 (285)
Q Consensus 11 ~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif~ 76 (285)
.+|.+|+||||+|+..++.+.+..+ .| .++.....-.-.+-++..+. ....+..|.+|.||..+..
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 5799999999999999875443211 01 12322111111111221111 2235677888999987664
Q ss_pred h
Q 023260 77 E 77 (285)
Q Consensus 77 ~ 77 (285)
.
T Consensus 85 ~ 85 (137)
T 3c5r_A 85 K 85 (137)
T ss_dssp H
T ss_pred H
Confidence 4
No 51
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=95.48 E-value=0.0044 Score=54.94 Aligned_cols=25 Identities=28% Similarity=0.403 Sum_probs=21.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLN 33 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~ 33 (285)
+|.+|.+|+||||+|+..++.+.++
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~ 103 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIP 103 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 5889999999999999998766543
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=95.43 E-value=0.0026 Score=54.76 Aligned_cols=20 Identities=35% Similarity=0.508 Sum_probs=16.8
Q ss_pred hhccccCCCCchhhhhhhcC
Q 023260 8 LVDSTDGEGNNILHLAGKLA 27 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~ 27 (285)
-+|.+|.+|+||||+|+..+
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHC
T ss_pred CcCccCCCCCCHHHHHHHcc
Confidence 35789999999999999844
No 53
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=95.41 E-value=0.003 Score=54.86 Aligned_cols=69 Identities=26% Similarity=0.385 Sum_probs=39.4
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc-------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV-------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~-------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+|+||||+|+..++...+..+ .| .+|+....-.-.+-|+-++. ....+.+|++|.||.+
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~ 149 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALE 149 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 578888999999999988875443211 12 13333221111122222221 2246678999999998
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
+..+
T Consensus 150 ~A~~ 153 (244)
T 3ui2_A 150 LARE 153 (244)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=95.36 E-value=0.008 Score=51.58 Aligned_cols=68 Identities=25% Similarity=0.259 Sum_probs=34.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
-+|.+|.+|+||||+|+..++...-.. . -..++-+.|.-.. ..-.......+..|++|.||.++....
T Consensus 168 ~~~~~d~~g~TpLh~A~~~~~~~~~~~-~-~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 168 DLRRQDSRGNTVLHALVAIADNTRENT-K-FVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSSHHHH-H-HHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred CCcccCCCCCcHHHHHHHhccCchhHH-H-HHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHc
Confidence 357788889999999888765322000 0 0000101010000 000000112267999999999987654
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=95.33 E-value=0.0033 Score=57.03 Aligned_cols=24 Identities=25% Similarity=0.365 Sum_probs=20.0
Q ss_pred hcc-ccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDS-TDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~-~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|. +|.+|+||||+|+..++.+.+
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v 147 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELV 147 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHH
T ss_pred cccccCCCCCcHHHHHHHcCCHHHH
Confidence 566 899999999999999875443
No 56
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=95.32 E-value=0.0031 Score=50.11 Aligned_cols=66 Identities=23% Similarity=0.183 Sum_probs=37.1
Q ss_pred ccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccchh
Q 023260 12 TDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 12 ~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|+||||.|+..++.+.++.+ . | .++.....-.-.+-|+..+. ....+.+|.+|.||......
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 688999999999999875543221 0 1 12332211111122222222 12356778899999887644
No 57
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=95.30 E-value=0.0038 Score=54.28 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=39.4
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc-----------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV-----------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~-----------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif 75 (285)
+|.+|.+|+||||+|+..++.+.++.+ .| .++..-.+-.-.+-|+-.+. ....+.+|++|+||.++.
T Consensus 127 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 127 IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 577889999999999988765443221 01 12322111111111221111 234678999999999988
Q ss_pred hh
Q 023260 76 SE 77 (285)
Q Consensus 76 ~~ 77 (285)
.+
T Consensus 207 ~~ 208 (261)
T 2xai_A 207 PP 208 (261)
T ss_dssp CT
T ss_pred cc
Confidence 64
No 58
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=95.29 E-value=0.0026 Score=50.86 Aligned_cols=65 Identities=15% Similarity=0.103 Sum_probs=26.1
Q ss_pred hccccCCCCc-hhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcCc-chhhcccCCCCCccc
Q 023260 9 VDSTDGEGNN-ILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRA 73 (285)
Q Consensus 9 ~n~~D~~GNT-~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~~-~~~~~~N~dG~Tp~d 73 (285)
+|.+|.+|+| |||+|++.++.+.+..+ .| .+++...+-...+-|+.++.. .....+|.+|.||.+
T Consensus 70 ~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 5778889998 99999988875443221 01 133332222222233333322 236677888888866
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=95.29 E-value=0.0035 Score=50.19 Aligned_cols=70 Identities=13% Similarity=0.150 Sum_probs=39.0
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
..+.+|.+|+||||+|+..++.+.++.+ .| .++..-..-.-.+-|+..+. ....+..|.+|.||..
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 113 (165)
T 3twr_A 34 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLH 113 (165)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 4567889999999999999875543221 01 12322111111111221111 2236677889999987
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
....
T Consensus 114 ~A~~ 117 (165)
T 3twr_A 114 EAAA 117 (165)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6644
No 60
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=95.26 E-value=0.0035 Score=56.93 Aligned_cols=19 Identities=11% Similarity=0.048 Sum_probs=15.1
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+..|++|.||.++....
T Consensus 236 d~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 236 DVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCCCCCCHHHHHHHh
Confidence 4678899999999887554
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=95.24 E-value=0.0046 Score=50.75 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=14.7
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+.+|++|.||.++....
T Consensus 170 ~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 170 DQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHH
T ss_pred CCCccCCCCCCHHHHHHHc
Confidence 4677889999999877553
No 62
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=95.21 E-value=0.0034 Score=51.71 Aligned_cols=23 Identities=17% Similarity=0.036 Sum_probs=18.6
Q ss_pred ccccCCCCchhhhhhhcCCCCcc
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+..|.+|+||||.|++.++.+.+
T Consensus 38 ~~~~~~g~t~L~~A~~~g~~~~v 60 (183)
T 3deo_A 38 ADVVSEYETPWWTAARKADEQAL 60 (183)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHH
Confidence 45678999999999999875543
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=95.20 E-value=0.0069 Score=52.29 Aligned_cols=24 Identities=25% Similarity=0.051 Sum_probs=18.0
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v 70 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIV 70 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 567888888888888888765443
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=95.14 E-value=0.0041 Score=50.64 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=39.7
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
.+|.+|.+|+||||+|+..++.+.++.+ . | .+++....-.-.+-|+..+. ....+..|.+|.||..
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 110 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLH 110 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 4688999999999999999875543321 0 1 12322111111111221111 2246677889999987
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
....
T Consensus 111 ~A~~ 114 (179)
T 3f6q_A 111 YACF 114 (179)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6644
No 65
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=95.11 E-value=0.006 Score=51.29 Aligned_cols=55 Identities=13% Similarity=-0.057 Sum_probs=30.5
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhc-CcchhhcccCCCC-Cccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVV-PRKLAEAKNKKGL-TPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~-~~~~~~~~N~dG~-Tp~dif~~ 77 (285)
+|.+|.+|+||||+|+..++.+... .. +-|+..+ .....+.+|++|. ||......
T Consensus 68 vn~~d~~g~TpLh~a~~~~~~~~~~-----~~---------~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 68 IKSRTKEGTTLFFPLFQGGGNDITG-----TT---------ELCKIFLEKGADITALYKPYKIVVFKNIFN 124 (186)
T ss_dssp SSCCCTTCCCTHHHHHHHCTTCHHH-----HH---------HHHHHHHHTTCCSSSCBGGGTBCTTGGGGG
T ss_pred CCCCCCCCCcHHHHHHHcCCcchhh-----HH---------HHHHHHHHCCCCCCccCCCcCchHHHHHHH
Confidence 4666777777777777665432100 00 1111111 1235778899999 99876644
No 66
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=95.07 E-value=0.0063 Score=53.84 Aligned_cols=69 Identities=19% Similarity=0.083 Sum_probs=39.5
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c---------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S---------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 75 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~---------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~dif 75 (285)
+|.+|.+|+||||+|+..++.+.+..+ . | .+++.-.+-.-.+-|+.++. ....+.+|++|+||.++.
T Consensus 183 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 262 (285)
T 3d9h_A 183 IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELV 262 (285)
T ss_dssp TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHh
Confidence 477889999999999988875543321 0 1 12322111000111221111 234778999999999998
Q ss_pred hh
Q 023260 76 SE 77 (285)
Q Consensus 76 ~~ 77 (285)
.+
T Consensus 263 ~~ 264 (285)
T 3d9h_A 263 PP 264 (285)
T ss_dssp CT
T ss_pred cC
Confidence 74
No 67
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=95.05 E-value=0.0048 Score=46.52 Aligned_cols=23 Identities=35% Similarity=0.494 Sum_probs=18.3
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||.|+..++.+.
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~ 57 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEI 57 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHH
Confidence 57788999999999998876543
No 68
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=95.05 E-value=0.0045 Score=52.25 Aligned_cols=72 Identities=21% Similarity=0.042 Sum_probs=43.9
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC--cchhhcccCCCCC
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP--RKLAEAKNKKGLT 70 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~--~~~~~~~N~dG~T 70 (285)
...++.+|.+|+||||+|+..++.+.+..+ . | .+|.....-.-.+-|+.++. ....+.+|.+|.|
T Consensus 63 ~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~t 142 (222)
T 3ehr_A 63 SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT 142 (222)
T ss_dssp HHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCC
T ss_pred hhhccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCC
Confidence 346788999999999999999875543221 1 1 12332221111233444443 3356778999999
Q ss_pred ccccchh
Q 023260 71 PRALFSE 77 (285)
Q Consensus 71 p~dif~~ 77 (285)
|..+...
T Consensus 143 pL~~A~~ 149 (222)
T 3ehr_A 143 ALHAAAW 149 (222)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887644
No 69
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=95.04 E-value=0.0042 Score=53.58 Aligned_cols=70 Identities=26% Similarity=0.243 Sum_probs=41.1
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
-+|.+|.+|+||||+|+..++.+.+..+ . | .+|..-.+-.-.+-|+.++. ....+.+|++|.||.+
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4678899999999999999886654322 1 1 12332211111122222221 1236678899999988
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
+...
T Consensus 196 ~A~~ 199 (253)
T 1yyh_A 196 LAAR 199 (253)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 70
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=95.03 E-value=0.0052 Score=51.28 Aligned_cols=70 Identities=19% Similarity=0.242 Sum_probs=37.8
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ . | .++....+-...+-|+..+. ....+.+|.+|.||.++
T Consensus 118 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 197 (223)
T 2f8y_A 118 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI 197 (223)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHH
Confidence 577888999999999988865443221 0 1 12222111111111221111 12356778888999887
Q ss_pred chhh
Q 023260 75 FSEQ 78 (285)
Q Consensus 75 f~~~ 78 (285)
..+.
T Consensus 198 A~~~ 201 (223)
T 2f8y_A 198 AQER 201 (223)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6543
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=95.02 E-value=0.0056 Score=54.09 Aligned_cols=53 Identities=23% Similarity=0.317 Sum_probs=36.1
Q ss_pred hhhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccch
Q 023260 6 DLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFS 76 (285)
Q Consensus 6 ~~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~ 76 (285)
+..+|.+|.+|+||||+|+..++.+.++.+ ++. .....+..|.+|.||..+..
T Consensus 101 ~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~L----------------l~~--g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 101 DYVVNIADSNGNTALHYSVSHANFPVVQQL----------------LDS--GVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHHHTCCCTTSCCHHHHHHHTTCHHHHHHH----------------HHT--SCCCTTCCCTTSCCHHHHGG
T ss_pred hhcCcCCCCCCCCHHHHHHHCCCHHHHHHH----------------HHC--CCCcCCCCCCCCCCHHHHHH
Confidence 445899999999999999999875433221 010 12246677888888876543
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=95.00 E-value=0.0044 Score=49.22 Aligned_cols=68 Identities=13% Similarity=0.292 Sum_probs=38.3
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+. ++.+.++.+ .| .++.....-...+-|+..+. ....+.+|.+|.||...
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 109 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHL 109 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 57889999999999998 765443221 01 12332211111222222221 22356788899999887
Q ss_pred chh
Q 023260 75 FSE 77 (285)
Q Consensus 75 f~~ 77 (285)
...
T Consensus 110 A~~ 112 (162)
T 1ihb_A 110 AAK 112 (162)
T ss_dssp HHH
T ss_pred HHH
Confidence 644
No 73
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=94.99 E-value=0.0053 Score=57.76 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=14.6
Q ss_pred hhhcccCCCCCccccchhh
Q 023260 60 LAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~~~ 78 (285)
..+..|++|.||.++....
T Consensus 293 d~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 293 DLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp CTTCCCTTSCCHHHHHHHT
T ss_pred CCCCcCCCCCCHHHHHHHC
Confidence 4677889999998877543
No 74
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=94.94 E-value=0.0045 Score=55.54 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=29.8
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhc--CcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVV--PRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~--~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||+|+..+.... |+.++ .....+.+|++|.||..+..+
T Consensus 232 ~n~~d~~g~t~L~~a~~~~~~~~--------------------v~~Ll~~~~~~vn~~d~~G~TpL~~A~~ 282 (337)
T 4g8k_A 232 VNVRGERGKTPLILAVEKKHLGL--------------------VQRLLEQEHIEINDTDSDGKTALLLAVE 282 (337)
T ss_dssp TTCCCGGGCCHHHHHHHTTCHHH--------------------HHHHHTSTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHhhhhHH--------------------HHHHHHhcCCcccCcCCCCCCHHHHHHH
Confidence 35566666666666666654322 22221 223577889999999887644
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=94.93 E-value=0.0051 Score=54.45 Aligned_cols=22 Identities=18% Similarity=0.067 Sum_probs=18.0
Q ss_pred hhccccCCCCchhhhhhhcCCC
Q 023260 8 LVDSTDGEGNNILHLAGKLAPP 29 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~ 29 (285)
....+|.+|+||||+|+..+++
T Consensus 203 ~~~~~~~~~~t~L~~A~~~~~~ 224 (351)
T 3utm_A 203 INFKQPQSHETALHCAVASLHP 224 (351)
T ss_dssp TTCCCTTTCCCHHHHHHHCCST
T ss_pred ccccCCCCCCCHHHHHHHHhCc
Confidence 3455789999999999998764
No 76
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=94.81 E-value=0.0061 Score=52.15 Aligned_cols=19 Identities=21% Similarity=0.108 Sum_probs=13.8
Q ss_pred chhhcccCCCCCccccchh
Q 023260 59 KLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 59 ~~~~~~N~dG~Tp~dif~~ 77 (285)
...+..|.+|.||.++..+
T Consensus 244 ~~~~~~~~~g~t~l~~A~~ 262 (285)
T 1wdy_A 244 IEINDTDSDGKTALLLAVE 262 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHH
T ss_pred CCccccCCCCCcHHHHHHH
Confidence 3467778888888887654
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=94.73 E-value=0.0062 Score=52.60 Aligned_cols=21 Identities=10% Similarity=-0.151 Sum_probs=13.2
Q ss_pred ccccCCCCchhhhhhhcCCCC
Q 023260 10 DSTDGEGNNILHLAGKLAPPD 30 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~ 30 (285)
+..|.+|.||||.|+..++.+
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~ 35 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELE 35 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHH
T ss_pred cccccchhHHHHHHHHcCCHH
Confidence 445566666777777766543
No 78
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=94.70 E-value=0.0059 Score=52.98 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=36.5
Q ss_pred ccccCCCCchhhhhhhcCCCCccccc-cc-----------hhHHHHHHHHHHhhhhhhcC-cchhhccc-CCCCCccccc
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRLNVV-SG-----------SALQMQRELLWFQAVKKVVP-RKLAEAKN-KKGLTPRALF 75 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l~~~-~g-----------aalqm~~el~w~k~v~~~~~-~~~~~~~N-~dG~Tp~dif 75 (285)
+..|.+|+||||.|++.++...+..+ .| .+|..-..-.-.+-|+.++. ....+..| ++|.||..+.
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 39 ADVVSEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 34567999999999999876544321 11 12332221111222332222 12344555 7799998766
Q ss_pred hh
Q 023260 76 SE 77 (285)
Q Consensus 76 ~~ 77 (285)
..
T Consensus 119 ~~ 120 (244)
T 3ui2_A 119 AG 120 (244)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 79
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=94.67 E-value=0.0057 Score=51.10 Aligned_cols=70 Identities=14% Similarity=0.087 Sum_probs=40.7
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC--cchhhcccCCCCCcc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP--RKLAEAKNKKGLTPR 72 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~--~~~~~~~N~dG~Tp~ 72 (285)
-+|.+|.+|+||||+|+..++.+.++.+ .| .++..-.+-.-.+-++..+. +...+..|.+|.||.
T Consensus 99 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L 178 (228)
T 2dzn_A 99 DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL 178 (228)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHH
T ss_pred ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHH
Confidence 4688999999999999998875443221 01 12322111111122322222 234677889999998
Q ss_pred ccchh
Q 023260 73 ALFSE 77 (285)
Q Consensus 73 dif~~ 77 (285)
+....
T Consensus 179 ~~A~~ 183 (228)
T 2dzn_A 179 FHALA 183 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 80
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=94.57 E-value=0.0072 Score=48.80 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.3
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||.|++.++.+.+
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v 63 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIV 63 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 578999999999999999875543
No 81
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=94.54 E-value=0.015 Score=50.50 Aligned_cols=20 Identities=30% Similarity=0.513 Sum_probs=15.7
Q ss_pred hccccCCCCchhhhhhhcCC
Q 023260 9 VDSTDGEGNNILHLAGKLAP 28 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~ 28 (285)
+|.+|.+|+||||+|++.++
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCC
T ss_pred ceeeCCCCCcHHHHHHHccC
Confidence 46788888888888888765
No 82
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=94.53 E-value=0.0072 Score=48.62 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=34.2
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
.+|.+|.+|+||||+|+..++.+.++.+ ++. ....+..|.+|.||......
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~L----------------l~~---g~~~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 28 LVNKPDERGFTPLIWASAFGEIETVRFL----------------LEW---GADPHILAKERESALSLAST 78 (172)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHH----------------HHH---TCCTTCCCTTCCCHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHcCCHHHHHHH----------------HHc---CCCchhhcccCCCHHHHHHH
Confidence 3788999999999999999864433211 011 12356677888888776543
No 83
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=94.47 E-value=0.0081 Score=50.09 Aligned_cols=70 Identities=26% Similarity=0.243 Sum_probs=39.6
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccc--c----------c-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCccc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------G-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 73 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~--~----------g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~d 73 (285)
.++.+|.+|+||||+|+..++.+.++.+ . | .++.....-.-.+.|+..+. ....+..|.+|.||.+
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 163 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHH
Confidence 4678899999999999998875543321 0 1 12222111111111222211 2245678899999988
Q ss_pred cchh
Q 023260 74 LFSE 77 (285)
Q Consensus 74 if~~ 77 (285)
+...
T Consensus 164 ~A~~ 167 (223)
T 2f8y_A 164 LAAR 167 (223)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7644
No 84
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=94.46 E-value=0.0069 Score=49.67 Aligned_cols=24 Identities=33% Similarity=0.329 Sum_probs=20.1
Q ss_pred hhccccCCCCchhhhhhhcCCCCc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
-+|.+|.+|+||||+|++.++.+.
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~ 54 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEI 54 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHH
Confidence 467889999999999999887443
No 85
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=94.42 E-value=0.0071 Score=50.88 Aligned_cols=50 Identities=14% Similarity=0.116 Sum_probs=33.8
Q ss_pred ccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 10 DSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+.+|.+|+||||+|+..++.+.++.+ ++. ....+.+|.+|.||..+....
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~L----------------l~~---ga~~~~~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLL----------------IEH---GADIRAQDSLGNTVLHILILQ 164 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHH----------------HHT---TCCTTCCCTTSCCHHHHHHTC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHH----------------HHC---CCCCCCCCCCCCCHHHHHHHc
Confidence 34566899999999998864433211 111 124677899999998877543
No 86
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=94.37 E-value=0.0084 Score=47.98 Aligned_cols=51 Identities=16% Similarity=0.132 Sum_probs=33.4
Q ss_pred hhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
.+|.+|.+|+||||+|+..++.+.++. + ++. ....+..|.+|.||......
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~--------------L--l~~---g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAHGQIAVVEF--------------L--LQN---GADPQLLGKGRESALSLACS 78 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHH--------------H--HHT---TCCTTCCCTTCCCHHHHHHH
T ss_pred CcCCCCCCCCCHHHHHHHCCCHHHHHH--------------H--HHc---CCCCCCcCCCCCcHHHHHHH
Confidence 368899999999999999886433221 1 111 12355667888888765543
No 87
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=94.34 E-value=0.0093 Score=50.51 Aligned_cols=22 Identities=23% Similarity=0.255 Sum_probs=11.9
Q ss_pred ccccCCCCchhhhhhhcCCCCc
Q 023260 10 DSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 10 n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
|.+|.+|+||||+|+..++...
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~ 23 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKAL 23 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSS
T ss_pred CcCCCCCCchhHHHHHcCChhH
Confidence 4567777777777777776544
No 88
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=94.23 E-value=0.008 Score=52.18 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=33.6
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||+|+..++.+.++.+ ++. ....+..|.+|.||......
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~L----------------l~~---g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKIL----------------LKH---GAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHH----------------HHT---TCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHH----------------HHC---CCCCCCCCCCCCCHHHHHHH
Confidence 578999999999999998874433211 011 12356677888888776544
No 89
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=94.19 E-value=0.014 Score=54.03 Aligned_cols=24 Identities=17% Similarity=0.079 Sum_probs=20.2
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
.|.+|.+|+||||+|++.++.+.+
T Consensus 271 ~~~~~~~g~t~L~~A~~~~~~~~~ 294 (437)
T 1n11_A 271 GNLGNKSGLTPLHLVAQEGHVPVA 294 (437)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 578899999999999999875543
No 90
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=94.05 E-value=0.011 Score=51.69 Aligned_cols=23 Identities=22% Similarity=0.170 Sum_probs=19.1
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||+|+..++.+.
T Consensus 66 ~~~~~~~g~t~L~~A~~~g~~~~ 88 (299)
T 1s70_B 66 INYANVDGLTALHQACIDDNVDM 88 (299)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHH
Confidence 57889999999999999886443
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=93.95 E-value=0.01 Score=44.49 Aligned_cols=50 Identities=28% Similarity=0.377 Sum_probs=32.7
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|.+|+||||.|+..++.+.++ |+- + ........|.+|.||......
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~--------------~Ll--~---~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVK--------------LLL--E---AGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHH--------------HHH--H---TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHH--------------HHH--H---cCCCCcccCCCCCcHHHHHHH
Confidence 4678889999999999877533221 111 1 112356778899999876644
No 92
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=93.92 E-value=0.0097 Score=43.30 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=19.6
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||+|++.++.+.
T Consensus 61 ~~~~d~~g~t~l~~A~~~~~~~~ 83 (93)
T 1n0q_A 61 VNAKDKNGRTPLHLAARNGHLEV 83 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHH
Confidence 57899999999999999886443
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=93.85 E-value=0.011 Score=49.17 Aligned_cols=70 Identities=19% Similarity=0.111 Sum_probs=37.5
Q ss_pred hccccCCCCchhhhhhhcCCCCc-cccc-------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR-LNVV-------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPR 72 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~-l~~~-------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~ 72 (285)
++.+|.+|+||||+|+..+.... +..+ .| .++....+-...+-|+..+. .......|.+|.||.
T Consensus 135 ~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 214 (240)
T 3eu9_A 135 VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL 214 (240)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHH
T ss_pred ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 56788888999999886665322 1110 11 13332211111111221111 124678899999999
Q ss_pred ccchhh
Q 023260 73 ALFSEQ 78 (285)
Q Consensus 73 dif~~~ 78 (285)
++..+.
T Consensus 215 ~~A~~~ 220 (240)
T 3eu9_A 215 DLAKQR 220 (240)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 987654
No 94
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=93.83 E-value=0.011 Score=49.80 Aligned_cols=23 Identities=17% Similarity=0.125 Sum_probs=19.7
Q ss_pred hccccCCCCchhhhhhhcCCCCc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDR 31 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~ 31 (285)
+|.+|.+|+||||+|+..++.+.
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~ 26 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDI 26 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHH
Confidence 57899999999999999987443
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=93.81 E-value=0.0095 Score=53.18 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=34.1
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
++..|.+|+||||+|+..+......+ -+.|. +. ....+.+|.+|.||......
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~--------v~~Ll-----~~---ga~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHI--------VDFLV-----QN---SGNLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHH--------HHHHH-----HH---CSCTTCCCTTCCCHHHHHHH
T ss_pred ccccccCCCCcchHHHHhcccchHHH--------HHHHH-----HC---CCCccccCCCCCCHHHHHHH
Confidence 67789999999999999853222211 01111 11 12467789999999887644
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=93.57 E-value=0.013 Score=54.03 Aligned_cols=24 Identities=25% Similarity=0.166 Sum_probs=20.5
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv 182 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLV 182 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CcCCCCCCCCHHHHHHHcChHHHH
Confidence 588999999999999999875443
No 97
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=93.54 E-value=0.012 Score=51.95 Aligned_cols=69 Identities=13% Similarity=-0.072 Sum_probs=36.9
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
++.+|.+|+||||+|+..++.+.+..+ .| .+|..-..-.-.+-|+.++. ....+..|.+|.||...
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 131 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFN 131 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 577888888899888888865443211 01 12222111111111221111 22356778899999876
Q ss_pred chh
Q 023260 75 FSE 77 (285)
Q Consensus 75 f~~ 77 (285)
...
T Consensus 132 A~~ 134 (285)
T 3d9h_A 132 ACV 134 (285)
T ss_dssp HHH
T ss_pred HHH
Confidence 644
No 98
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=92.85 E-value=0.019 Score=48.05 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=36.6
Q ss_pred hccccCCCCchhhhhhhcCCCCccccc------------cc-hhHHHHHHHHHHhhhhhhcC-cchhhcccCCCCCcccc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVV------------SG-SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRAL 74 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~------------~g-aalqm~~el~w~k~v~~~~~-~~~~~~~N~dG~Tp~di 74 (285)
+|.+|.+|+||||+|+..++.+.+..+ .| .++....+-.-.+-|+..+. ....+.+|.+|.||.+.
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 178 (231)
T 3aji_A 99 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHL 178 (231)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHH
Confidence 567888899999999888765433211 01 12222111111111221111 22356778899999887
Q ss_pred chh
Q 023260 75 FSE 77 (285)
Q Consensus 75 f~~ 77 (285)
...
T Consensus 179 A~~ 181 (231)
T 3aji_A 179 ACD 181 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 644
No 99
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=92.77 E-value=0.01 Score=44.84 Aligned_cols=52 Identities=19% Similarity=0.186 Sum_probs=30.7
Q ss_pred hhhccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 7 LLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 7 ~l~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
...+..|.+|+||||.|+..++.+.++. + ++. ....+.+|.+|.||..+...
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~--------------L--l~~---g~~i~~~d~~g~tpLh~A~~ 66 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRI--------------L--MAN---GADVAAKDKNGSTPLHLAAR 66 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHH--------------H--HHT---TCCTTCCCTTCCCHHHHHHH
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHH--------------H--HHc---CCCCCccCCCCCCHHHHHHH
Confidence 3457799999999999999986433221 1 111 12466788999999876644
No 100
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=92.46 E-value=0.042 Score=46.95 Aligned_cols=48 Identities=15% Similarity=0.063 Sum_probs=31.6
Q ss_pred CCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 14 GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 14 ~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
.+|+||||+|+..++.+.++.+ ++..-.....+.+|++|.||......
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~L----------------l~~~~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYL----------------TENGHKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHH----------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHH----------------HhccccCCCCcccCCCCCcHHHHHHH
Confidence 6899999999998864433211 11000123467889999999887653
No 101
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=92.10 E-value=0.026 Score=49.84 Aligned_cols=18 Identities=17% Similarity=-0.206 Sum_probs=12.5
Q ss_pred hhhcccCCC-CCccccchh
Q 023260 60 LAEAKNKKG-LTPRALFSE 77 (285)
Q Consensus 60 ~~~~~N~dG-~Tp~dif~~ 77 (285)
.....|.+| .||......
T Consensus 120 ~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 120 RLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp GGGGCSSSGGGSHHHHHHH
T ss_pred CCCccCCCCCCCHHHHHHH
Confidence 356777888 788776544
No 102
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=92.09 E-value=0.026 Score=48.31 Aligned_cols=46 Identities=20% Similarity=0.069 Sum_probs=29.8
Q ss_pred CCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 16 GNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 16 GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
|+||||+|+..++.+.++.+ ++..-.....+.+|++|.||..+...
T Consensus 136 g~tpL~~A~~~~~~~~v~~L----------------l~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVTYL----------------LENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp CSSHHHHHHHTTCHHHHHHH----------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHH----------------HhccccCCCcCccCCCCCCHHHHHHH
Confidence 99999999998864433211 11000123467889999999887653
No 103
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=91.98 E-value=0.028 Score=50.23 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=20.9
Q ss_pred hhccccCCCCchhhhhhhcCCCCcc
Q 023260 8 LVDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 8 l~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
-+|.+|.+|+||||+|++.++.+.+
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~~~iv 289 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKLKKIA 289 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHH
Confidence 4688999999999999999875443
No 104
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=91.95 E-value=0.046 Score=47.28 Aligned_cols=48 Identities=17% Similarity=0.033 Sum_probs=31.1
Q ss_pred CCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 14 GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 14 ~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
.+|+||||+|+..++.+.++.+ ++..-.....+.+|++|.||..+...
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~L----------------l~~~~~gad~~~~d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFL----------------LQNSWQPADISARDSVGNTVLHALVE 193 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHH----------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHH----------------HhcccCCCCceeeCCCCCcHHHHHHH
Confidence 3899999999998864433211 11000123467889999999887654
No 105
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=91.78 E-value=0.037 Score=50.00 Aligned_cols=17 Identities=18% Similarity=0.018 Sum_probs=13.7
Q ss_pred hhcccCCCCCccccchh
Q 023260 61 AEAKNKKGLTPRALFSE 77 (285)
Q Consensus 61 ~~~~N~dG~Tp~dif~~ 77 (285)
.+..|.+|.||......
T Consensus 204 ~~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAIL 220 (364)
T ss_dssp TTCCCTTCCCTTHHHHT
T ss_pred ccccCCCCCcHHHHHHH
Confidence 67788999999887654
No 106
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=91.16 E-value=0.039 Score=46.97 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=16.6
Q ss_pred hccc-cCCCCchhhhhhhcCCCCcc
Q 023260 9 VDST-DGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~-D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+ |.+|+||||+|+..++.+.+
T Consensus 31 ~~~~~~~~g~t~L~~A~~~g~~~~v 55 (285)
T 1wdy_A 31 VNFQEEEGGWTPLHNAVQMSREDIV 55 (285)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred cccccCCCCCcHHHHHHHcCCHHHH
Confidence 3444 67788888888887765443
No 107
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=90.91 E-value=0.036 Score=43.54 Aligned_cols=50 Identities=24% Similarity=0.380 Sum_probs=35.9
Q ss_pred hccccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
+|.+|.+|+||||+|++.++.+.++ |+ ++. ...+.+|.+|.||.++....
T Consensus 94 ~~~~~~~g~t~L~~A~~~~~~~~v~--------------~L--l~~----~~~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 94 VNVPDGTGALPIHLAVQEGHTAVVS--------------FL--AAE----SDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp SCCCCTTSCCHHHHHHHHTCHHHHH--------------HH--HTT----SCTTCCCTTSCCHHHHHHHS
T ss_pred CCCcCCCCCcHHHHHHHhChHHHHH--------------HH--Hhc----cCCCCcCCCCCCHHHHHHHc
Confidence 5789999999999999988643321 11 111 34678899999999887543
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=89.58 E-value=0.072 Score=49.91 Aligned_cols=50 Identities=14% Similarity=0.052 Sum_probs=33.4
Q ss_pred hcccc--CCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 9 VDSTD--GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 9 ~n~~D--~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+| .+|+||||+|+..++...+.. |. +. ....+..|.+|.||......
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~-----------LL-----~~---Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEF-----------LL-----QN---GANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHH-----------HH-----HT---TCCTTCCCTTSCCHHHHHHH
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHH-----------HH-----Hc---CCCCCCCCCCCCCHHHHHHH
Confidence 46677 899999999999876433221 11 11 22467888999999876543
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=88.19 E-value=0.082 Score=50.82 Aligned_cols=50 Identities=22% Similarity=0.189 Sum_probs=30.4
Q ss_pred cCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchhh
Q 023260 13 DGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 78 (285)
Q Consensus 13 D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~~ 78 (285)
|.+|+||||+|+..+....+.+ -+.| ++. ....+..|.+|.||.......
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~--------v~~L-----l~~---ga~vn~~d~~g~TpLh~A~~~ 217 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPL--------VDFI-----IQN---GGHLDAKAADGNTALHYAALY 217 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHH--------HHHH-----HHH---SCCTTCCCSSSCCHHHHHTTT
T ss_pred ccccchHHHHHHHhcccccHHH--------HHHH-----HHc---CCCCCccCCCCCcHHHHHHHc
Confidence 8899999999976332221111 1111 111 124778899999998877543
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=88.13 E-value=0.075 Score=47.86 Aligned_cols=50 Identities=22% Similarity=0.174 Sum_probs=31.6
Q ss_pred ccCCCCchhhhhhhcCCCCccccccchhHHHHHHHHHHhhhhhhcCcchhhcccCCCCCccccchh
Q 023260 12 TDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 77 (285)
Q Consensus 12 ~D~~GNT~LHLAa~~~~~~~l~~~~gaalqm~~el~w~k~v~~~~~~~~~~~~N~dG~Tp~dif~~ 77 (285)
+|.+|+||||+|+..+....+.+ -+.|.. . ....+..|.+|.||......
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~i--------v~~Ll~-----~---gadvn~~d~~G~TpLh~A~~ 235 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPL--------VDFIIQ-----N---GGHLDAKAADGNTALHYAAL 235 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHH--------HHHHHH-----H---SSCTTCCCTTCCCHHHHHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHH--------HHHHHh-----c---CCCCCCCCCCCCCHHHHHHH
Confidence 68999999999999853222211 111111 1 12467788999999876644
No 111
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=87.91 E-value=0.11 Score=42.96 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=12.4
Q ss_pred hhhcccCCCCCccccch
Q 023260 60 LAEAKNKKGLTPRALFS 76 (285)
Q Consensus 60 ~~~~~N~dG~Tp~dif~ 76 (285)
.....|.+|.||.....
T Consensus 134 ~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 134 DVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp CTTCCCTTSCCHHHHHH
T ss_pred CccccCCCCCcHHHHHH
Confidence 35677888999977654
No 112
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=84.85 E-value=0.17 Score=44.49 Aligned_cols=24 Identities=13% Similarity=-0.117 Sum_probs=20.6
Q ss_pred hccccCCCCchhhhhhhcCCCCcc
Q 023260 9 VDSTDGEGNNILHLAGKLAPPDRL 32 (285)
Q Consensus 9 ~n~~D~~GNT~LHLAa~~~~~~~l 32 (285)
+|.+|.+|+||||+|+..++.+.+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v 47 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLV 47 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHH
Confidence 688999999999999999875543
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=49.58 E-value=1 Score=42.07 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=15.4
Q ss_pred ccCCCCchhhhhh-hcCCCCccc
Q 023260 12 TDGEGNNILHLAG-KLAPPDRLN 33 (285)
Q Consensus 12 ~D~~GNT~LHLAa-~~~~~~~l~ 33 (285)
+|.+|+||||+|+ ..|+.+.++
T Consensus 194 ~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 194 IQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp HHHHHHHHHHHHHSTTCCHHHHH
T ss_pred cCCCCCCHHHHHHHHCCCHHHHH
Confidence 6777888888888 777654443
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=37.93 E-value=8.4 Score=35.75 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=19.0
Q ss_pred cccCCCCchhhhhhhcCCCCcccc
Q 023260 11 STDGEGNNILHLAGKLAPPDRLNV 34 (285)
Q Consensus 11 ~~D~~GNT~LHLAa~~~~~~~l~~ 34 (285)
..++.+|||||+|++.|+.+.+.+
T Consensus 314 ~~~n~~~~~L~~A~~~g~~e~v~l 337 (376)
T 2aja_A 314 TIPGDANELLRLALRLGNQGACAL 337 (376)
T ss_dssp SSTTCCCHHHHHHHHHTCTTHHHH
T ss_pred CCCCCccHHHHHHHHcCcHHHHHH
Confidence 345789999999999998766544
No 115
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=33.33 E-value=55 Score=22.41 Aligned_cols=14 Identities=14% Similarity=0.112 Sum_probs=7.5
Q ss_pred CCcchhhhHHHHHH
Q 023260 205 GSTWIAILVIVVPS 218 (285)
Q Consensus 205 ~~~~~~i~i~~l~~ 218 (285)
...|..|.+.+++.
T Consensus 6 ~vp~WiIi~svl~G 19 (54)
T 2l8s_A 6 RVPLWVILLSAFAG 19 (54)
T ss_dssp CCCTHHHHHHHHHH
T ss_pred cCchHHHHHHHHHH
Confidence 34555566655554
No 116
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.53 E-value=82 Score=21.49 Aligned_cols=13 Identities=23% Similarity=0.031 Sum_probs=6.6
Q ss_pred CcchhhhHHHHHH
Q 023260 206 STWIAILVIVVPS 218 (285)
Q Consensus 206 ~~~~~i~i~~l~~ 218 (285)
..|..|.+.+++.
T Consensus 10 vp~wiIi~svl~G 22 (54)
T 2knc_A 10 IPIWWVLVGVLGG 22 (54)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH
Confidence 3455555555553
No 117
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=24.03 E-value=1.3e+02 Score=19.38 Aligned_cols=12 Identities=0% Similarity=0.180 Sum_probs=6.6
Q ss_pred HHhhhcccccCC
Q 023260 237 RSVFVSDYLIPK 248 (285)
Q Consensus 237 ~~~~~~~~~~~~ 248 (285)
...|.+++|.|.
T Consensus 29 ~~LwK~GFFkR~ 40 (42)
T 2k1a_A 29 LAMWKVGFFKRN 40 (42)
T ss_dssp HHHHHTTTTCCC
T ss_pred HHHHHcCcccCC
Confidence 344666666553
Done!