Query 023261
Match_columns 285
No_of_seqs 121 out of 1322
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 02:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023261.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023261hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15171 lipopolysaccharide 1, 100.0 1.1E-53 2.3E-58 383.0 18.0 261 1-279 30-290 (334)
2 cd06429 GT8_like_1 GT8_like_1 100.0 1.2E-50 2.7E-55 349.6 18.0 233 2-275 6-256 (257)
3 cd06431 GT8_LARGE_C LARGE cata 100.0 2E-48 4.2E-53 340.5 17.4 261 1-282 7-274 (280)
4 PLN02718 Probable galacturonos 100.0 4.9E-48 1.1E-52 356.8 16.8 266 3-280 319-594 (603)
5 PLN02523 galacturonosyltransfe 100.0 2.6E-47 5.6E-52 348.1 18.6 262 8-280 258-550 (559)
6 COG1442 RfaJ Lipopolysaccharid 100.0 1.1E-46 2.4E-51 331.8 16.1 259 1-279 7-265 (325)
7 cd00505 Glyco_transf_8 Members 100.0 6.7E-46 1.5E-50 321.1 18.6 237 1-258 6-246 (246)
8 PLN02742 Probable galacturonos 100.0 8.1E-46 1.8E-50 338.0 18.0 261 8-280 237-526 (534)
9 PLN02829 Probable galacturonos 100.0 7.1E-46 1.5E-50 341.7 16.2 260 8-279 341-629 (639)
10 cd04194 GT8_A4GalT_like A4GalT 100.0 3E-45 6.4E-50 317.5 17.3 239 1-258 5-248 (248)
11 PLN02769 Probable galacturonos 100.0 1.1E-44 2.4E-49 336.1 15.4 255 8-280 340-621 (629)
12 PLN02870 Probable galacturonos 100.0 1.2E-44 2.6E-49 329.7 15.2 257 8-280 216-523 (533)
13 PLN02659 Probable galacturonos 100.0 3.2E-44 7E-49 326.9 15.4 260 8-280 217-524 (534)
14 PLN02910 polygalacturonate 4-a 100.0 5.7E-44 1.2E-48 328.7 16.7 258 8-280 355-648 (657)
15 PLN02867 Probable galacturonos 100.0 2.4E-43 5.2E-48 322.5 15.9 261 8-280 221-526 (535)
16 PF01501 Glyco_transf_8: Glyco 100.0 6.3E-42 1.4E-46 295.6 11.8 246 1-259 4-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 1.5E-40 3.2E-45 289.7 16.4 253 2-278 7-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 1.3E-39 2.8E-44 280.7 18.0 229 2-251 7-239 (248)
19 cd02537 GT8_Glycogenin Glycoge 100.0 1.8E-33 3.9E-38 242.3 12.5 208 1-261 6-217 (240)
20 PLN00176 galactinol synthase 100.0 2.7E-32 5.8E-37 241.4 16.0 232 1-260 29-270 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 4.2E-27 9.2E-32 203.9 13.8 214 1-260 6-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.4 3.1E-12 6.8E-17 126.2 12.1 235 3-259 1189-1426(1470)
23 COG5597 Alpha-N-acetylglucosam 99.2 5.1E-12 1.1E-16 108.2 1.6 171 84-279 155-359 (368)
24 PF03407 Nucleotid_trans: Nucl 97.4 0.00082 1.8E-08 56.6 8.5 141 84-251 51-201 (212)
25 PF11051 Mannosyl_trans3: Mann 96.6 0.0049 1.1E-07 54.1 5.9 106 3-122 8-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 96.1 0.01 2.2E-07 54.0 5.2 138 95-259 195-365 (429)
27 PF05637 Glyco_transf_34: gala 95.9 0.0052 1.1E-07 52.9 2.7 153 85-251 60-231 (239)
28 PLN03181 glycosyltransferase; 90.6 0.46 1E-05 43.7 5.0 108 95-226 196-326 (453)
29 cd02515 Glyco_transf_6 Glycosy 89.6 7.9 0.00017 33.7 11.4 115 98-226 123-247 (271)
30 KOG1950 Glycosyl transferase, 88.6 0.54 1.2E-05 43.2 4.0 164 86-260 114-290 (369)
31 PF00535 Glycos_transf_2: Glyc 88.2 6.7 0.00014 30.1 9.7 92 8-121 10-102 (169)
32 PF04765 DUF616: Protein of un 84.8 1.1 2.4E-05 39.7 3.7 49 84-133 139-188 (305)
33 KOG1928 Alpha-1,4-N-acetylgluc 82.4 0.64 1.4E-05 42.2 1.2 33 84-121 228-260 (409)
34 PF03414 Glyco_transf_6: Glyco 81.1 40 0.00086 30.5 11.9 188 5-225 109-311 (337)
35 cd02514 GT13_GLCNAC-TI GT13_GL 80.3 10 0.00022 34.4 8.1 107 6-118 10-117 (334)
36 cd06439 CESA_like_1 CESA_like_ 79.6 23 0.00051 29.7 10.0 91 9-121 42-133 (251)
37 cd06423 CESA_like CESA_like is 79.6 24 0.00053 26.9 9.5 89 9-118 10-99 (180)
38 PF03071 GNT-I: GNT-I family; 78.8 8.6 0.00019 36.0 7.3 111 6-121 103-214 (434)
39 cd02520 Glucosylceramide_synth 75.9 24 0.00052 28.6 8.7 96 8-120 13-109 (196)
40 cd04192 GT_2_like_e Subfamily 75.4 25 0.00054 28.8 8.8 96 8-120 9-105 (229)
41 COG2943 MdoH Membrane glycosyl 74.3 20 0.00043 34.5 8.3 92 9-115 162-257 (736)
42 PRK15383 type III secretion sy 73.2 2.1 4.5E-05 36.5 1.6 20 100-119 220-239 (335)
43 PRK15384 type III secretion sy 73.2 2 4.2E-05 36.7 1.4 20 100-119 217-236 (336)
44 PRK15382 non-LEE encoded effec 73.1 2.1 4.5E-05 36.5 1.6 20 100-119 212-231 (326)
45 PF04488 Gly_transf_sug: Glyco 72.5 2.2 4.8E-05 31.3 1.5 31 84-119 66-97 (103)
46 cd00761 Glyco_tranf_GTA_type G 69.7 38 0.00082 25.0 8.1 89 8-118 9-97 (156)
47 cd02510 pp-GalNAc-T pp-GalNAc- 69.6 32 0.00069 30.1 8.5 94 9-121 12-107 (299)
48 cd04190 Chitin_synth_C C-termi 68.9 12 0.00026 31.8 5.5 23 98-120 73-96 (244)
49 PF03314 DUF273: Protein of un 63.9 5.9 0.00013 33.2 2.4 23 91-114 35-57 (222)
50 PF13641 Glyco_tranf_2_3: Glyc 63.8 11 0.00024 31.2 4.2 93 10-119 15-108 (228)
51 TIGR03111 glyc2_xrt_Gpos1 puta 63.7 54 0.0012 30.7 9.2 91 9-119 62-153 (439)
52 PF05704 Caps_synth: Capsular 62.6 30 0.00065 30.4 6.8 32 84-120 112-143 (276)
53 PRK05454 glucosyltransferase M 62.6 44 0.00095 33.5 8.6 96 10-120 143-243 (691)
54 cd04184 GT2_RfbC_Mx_like Myxoc 62.1 62 0.0013 25.9 8.4 92 8-120 14-106 (202)
55 cd06913 beta3GnTL1_like Beta 1 60.8 90 0.002 25.6 9.3 99 8-121 9-108 (219)
56 cd06437 CESA_CaSu_A2 Cellulose 60.1 59 0.0013 27.0 8.1 91 8-115 13-104 (232)
57 cd04196 GT_2_like_d Subfamily 58.4 95 0.0021 24.9 9.9 92 9-121 11-103 (214)
58 cd06442 DPM1_like DPM1_like re 57.0 1.1E+02 0.0023 25.0 10.1 92 9-121 10-102 (224)
59 PF07801 DUF1647: Protein of u 56.8 23 0.00051 27.8 4.5 59 2-69 67-125 (142)
60 PRK11204 N-glycosyltransferase 55.4 1E+02 0.0022 28.4 9.5 90 9-120 67-157 (420)
61 TIGR03472 HpnI hopanoid biosyn 55.1 63 0.0014 29.5 7.9 89 10-115 55-143 (373)
62 cd06421 CESA_CelA_like CESA_Ce 54.2 1.1E+02 0.0024 25.1 8.7 39 10-48 16-54 (234)
63 KOG4748 Subunit of Golgi manno 51.8 16 0.00035 33.3 3.3 145 95-252 173-333 (364)
64 PRK14583 hmsR N-glycosyltransf 51.8 1E+02 0.0022 28.9 8.9 88 10-119 89-177 (444)
65 cd04179 DPM_DPG-synthase_like 51.6 1.2E+02 0.0025 23.8 9.9 93 9-121 10-103 (185)
66 PRK14716 bacteriophage N4 adso 51.4 1.6E+02 0.0035 28.3 10.2 109 11-130 81-190 (504)
67 cd04186 GT_2_like_c Subfamily 50.9 1.1E+02 0.0023 23.2 8.2 88 8-120 9-97 (166)
68 cd06434 GT2_HAS Hyaluronan syn 50.2 1.2E+02 0.0026 24.9 8.4 87 9-121 14-101 (235)
69 cd02525 Succinoglycan_BP_ExoA 49.3 89 0.0019 25.8 7.5 92 9-121 13-105 (249)
70 PF11735 CAP59_mtransfer: Cryp 46.5 1.2E+02 0.0026 26.1 7.8 25 98-123 112-137 (241)
71 PF10111 Glyco_tranf_2_2: Glyc 43.9 1.9E+02 0.0042 25.1 8.9 93 10-120 18-111 (281)
72 cd04195 GT2_AmsE_like GT2_AmsE 43.2 1.7E+02 0.0037 23.3 8.5 84 9-115 13-97 (201)
73 TIGR03469 HonB hopene-associat 40.8 2.1E+02 0.0046 26.2 9.0 100 9-120 53-156 (384)
74 cd06422 NTP_transferase_like_1 37.4 83 0.0018 26.0 5.4 23 100-122 98-120 (221)
75 cd04185 GT_2_like_b Subfamily 35.1 2.3E+02 0.005 22.5 8.4 23 98-120 79-102 (202)
76 PF11397 GlcNAc: Glycosyltrans 35.0 3.1E+02 0.0067 25.0 8.9 34 84-118 103-136 (343)
77 cd04191 Glucan_BSP_ModH Glucan 33.3 3.1E+02 0.0068 23.5 9.5 23 99-121 96-119 (254)
78 KOG1342 Histone deacetylase co 31.8 31 0.00066 31.7 1.8 33 88-121 155-187 (425)
79 PF11380 DUF3184: Protein of u 31.7 1E+02 0.0022 30.0 5.3 99 11-121 11-126 (691)
80 cd06420 GT2_Chondriotin_Pol_N 30.5 2.6E+02 0.0056 21.7 9.6 93 9-121 10-103 (182)
81 cd06436 GlcNAc-1-P_transferase 29.1 3E+02 0.0065 22.0 8.7 35 9-46 10-44 (191)
82 PF12633 Adenyl_cycl_N: Adenyl 27.8 78 0.0017 26.5 3.5 52 16-70 107-165 (204)
83 PF03142 Chitin_synth_2: Chiti 24.7 56 0.0012 31.6 2.4 39 95-133 198-237 (527)
84 cd06433 GT_2_WfgS_like WfgS an 24.5 3.4E+02 0.0074 21.1 8.0 86 9-119 11-97 (202)
85 PLN02726 dolichyl-phosphate be 24.4 4.2E+02 0.009 22.1 9.3 93 11-121 24-117 (243)
86 PRK10063 putative glycosyl tra 23.6 4.6E+02 0.0099 22.3 8.3 19 99-117 83-101 (248)
87 KOG2571 Chitin synthase/hyalur 23.4 61 0.0013 33.1 2.5 42 90-133 433-476 (862)
88 PF11316 Rhamno_transf: Putati 21.9 2.4E+02 0.0051 24.1 5.5 44 12-58 45-89 (234)
89 cd06435 CESA_NdvC_like NdvC_li 21.4 4.5E+02 0.0099 21.4 9.5 93 10-120 13-107 (236)
90 PF03452 Anp1: Anp1; InterPro 21.0 4.5E+02 0.0097 23.1 7.0 98 7-110 39-154 (269)
91 PF12123 Amidase02_C: N-acetyl 20.9 1E+02 0.0022 19.1 2.2 22 30-51 17-38 (45)
92 PF13704 Glyco_tranf_2_4: Glyc 20.3 3.1E+02 0.0067 19.0 5.9 16 99-114 72-87 (97)
93 cd04187 DPM1_like_bac Bacteria 20.1 4.2E+02 0.0091 20.5 9.8 91 11-121 12-104 (181)
No 1
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=1.1e-53 Score=382.96 Aligned_cols=261 Identities=20% Similarity=0.316 Sum_probs=200.2
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
||+|++|+++++|+|+||++|+++ ..++|||+++++++++++.|+++..+ + +.++.++.+|.+.+.+.+. ..+
T Consensus 30 ~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~-~-~~~i~~~~id~~~~~~~~~----~~~ 102 (334)
T PRK15171 30 YGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQ-Y-NTRINIYLINCERLKSLPS----TKN 102 (334)
T ss_pred EECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHh-c-CCeEEEEEeCHHHHhCCcc----cCc
Confidence 589999999999999999999864 57999999999999999999988754 3 3578888888777665533 236
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
+|.++|+||++|++||++++||||||+|+||.+||++||++|++++.++||+.++... + |.+...+....+.
T Consensus 103 ~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~---~-----~~~~~~~l~~~~~ 174 (334)
T PRK15171 103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE---W-----WSKRAQSLQTPGL 174 (334)
T ss_pred CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh---H-----HHHHHHhcCCccc
Confidence 7889999999999999779999999999999999999999999977777776543211 1 1111111011111
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCcccccccccC
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~ 240 (285)
...||||||||||+++||++++++++++++........+..+|||+||.+|.|+++.||++||++...............
T Consensus 175 ~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~ 254 (334)
T PRK15171 175 ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDSVINPV 254 (334)
T ss_pred cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHhcccccc
Confidence 34699999999999999999999999998875421122345799999999999999999999998421111111111111
Q ss_pred CCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261 241 AGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS 279 (285)
Q Consensus 241 ~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~ 279 (285)
..+|+||||+|+.|||+..+. ++++++||+|.+.+|
T Consensus 255 ~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp 290 (334)
T PRK15171 255 NDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP 290 (334)
T ss_pred cCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence 347899999999999987543 468899999998876
No 2
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.2e-50 Score=349.57 Aligned_cols=233 Identities=30% Similarity=0.555 Sum_probs=186.8
Q ss_pred CCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccc-------
Q 023261 2 TLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISS------- 74 (285)
Q Consensus 2 ~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------- 74 (285)
++| ||+ +++|++.|++.|++++.+++|||++++++.+.++.+.+.. ...+++++++.++...+.+....
T Consensus 6 ~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~--~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 6 FSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLN--PLKIATVKVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred Eec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhc--CCCCceEEEEEeCcHHhhcccccchhhhhh
Confidence 677 999 6889999999999877899999999999987666655432 12367888998876554332110
Q ss_pred ---------hhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeeccccccccccccc
Q 023261 75 ---------SIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSD 145 (285)
Q Consensus 75 ---------~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~ 145 (285)
..+.+++|+++|+||++|++||+ ++||||||+|+||++||++||++|++|+ ++||+++
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~-~~kvlYLD~Dviv~~dl~eL~~~dl~~~-~~aav~d----------- 148 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPK-LEKVIYLDDDVVVQKDLTELWNTDLGGG-VAGAVET----------- 148 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhh-hCeEEEEeCCEEEeCCHHHHhhCCCCCC-EEEEEhh-----------
Confidence 01335788999999999999995 9999999999999999999999999986 6766541
Q ss_pred ccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhcc--ccccCCCccchhhhhcCCeeecCcccc
Q 023261 146 EFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKER--RIYELGSLPPFLLVFGGDVEAIDHRWN 223 (285)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~--~~~~~~dq~~lN~~~~~~~~~L~~~wN 223 (285)
||||||||+|+++||++++++++.+|++....+ ..++++|||+||.+|.|+++.||++||
T Consensus 149 ------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~wN 210 (257)
T cd06429 149 ------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSWH 210 (257)
T ss_pred ------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChHHc
Confidence 799999999999999999999999999876543 335678999999999999999999999
Q ss_pred ccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccc
Q 023261 224 QHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYD 275 (285)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~ 275 (285)
++..++..... . ....+++||||+|+.|||+..+. ++++++||+|.
T Consensus 211 ~~~l~~~~~~~-~--~~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 211 VRGLGYNYGIR-P--QDIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred ccCCccccccc-c--cccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 98665432211 1 12347899999999999997653 36899999985
No 3
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2e-48 Score=340.45 Aligned_cols=261 Identities=21% Similarity=0.277 Sum_probs=188.6
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
+|. .+|+++++|+|+||++|+. ..++|||++++++++.++.|.+... .++.++.++.++. ....+.. ....+
T Consensus 7 ~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~--~~~~~i~f~~i~~--~~~~~~~-~~~~~ 78 (280)
T cd06431 7 CAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWM--VPAVEVSFYNAEE--LKSRVSW-IPNKH 78 (280)
T ss_pred Ecc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhcc--ccCcEEEEEEhHH--hhhhhcc-Ccccc
Confidence 356 8999999999999999974 5699999999999999888876643 2356777777752 1111111 01124
Q ss_pred cCc-hhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhcc--CCCCCceeeeecccccccccccccccccchhhhhcc
Q 023261 81 DSP-LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRI--PLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVF 157 (285)
Q Consensus 81 ~s~-~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~--dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (285)
++. .+|+||++|++||++++||||||||+||++||++||++ ++.++.++||+++.. .++....++ .. ..
T Consensus 79 ~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~---~~-~~ 150 (280)
T cd06431 79 YSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWK---NH-RP 150 (280)
T ss_pred hhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhh---cc-CC
Confidence 443 37899999999997799999999999999999999998 788777888876431 112111111 00 00
Q ss_pred CCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhc-cccccCCCccchhhhhcCC---eeecCccccccCCCCCccc
Q 023261 158 EGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKE-RRIYELGSLPPFLLVFGGD---VEAIDHRWNQHGLGGHNVE 233 (285)
Q Consensus 158 ~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~-~~~~~~~dq~~lN~~~~~~---~~~L~~~wN~~~~~~~~~~ 233 (285)
......||||||||+|+++||++++++++..+.+.... .....++|||+||.++.++ ++.||++||++.... ...
T Consensus 151 ~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~-~~~ 229 (280)
T cd06431 151 WPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDH-TRS 229 (280)
T ss_pred CcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCcc-chH
Confidence 01113599999999999999999999998766554321 1223568999999999999 899999999985321 111
Q ss_pred ccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCCCC
Q 023261 234 NSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTH 282 (285)
Q Consensus 234 ~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~~~ 282 (285)
..+. ...+.|+||||+|+.|||...+.. .++++.|.+|.+.+ +++
T Consensus 230 ~~~~-~~~~~p~IIHf~g~~KPW~~~~~~--~~~~~~~~~~~~~~-~~~ 274 (280)
T cd06431 230 EQCY-RDVSDLKVIHWNSPKKLRVKNKHV--EFFRNLYLTFLEYD-GNL 274 (280)
T ss_pred hHhh-cCcCCCEEEEeCCCCCCCCcCCCC--hHHHHHHHHHHhcC-chh
Confidence 1111 123578999999999999865432 47999999999888 654
No 4
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=4.9e-48 Score=356.84 Aligned_cols=266 Identities=23% Similarity=0.425 Sum_probs=201.5
Q ss_pred CCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchh-hhccc----cc--ch
Q 023261 3 LDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREK-FVTGL----IS--SS 75 (285)
Q Consensus 3 ~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~-~~~~~----~~--~~ 75 (285)
+++||+ +++|++.|++.|++++..++|||++|+++.+.++.+..+. ..+ ++.|+++.++.. .+... +. ..
T Consensus 319 ~sDNvl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~-~~~-~a~I~V~~Iddf~~lp~~~~~~lk~l~s 395 (603)
T PLN02718 319 FSDNVL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLN-PPG-KATIQILNIDDMNVLPADYNSLLMKQNS 395 (603)
T ss_pred EcCCce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhC-CCC-CcEEEEEecchhccccccchhhhhhccc
Confidence 455674 9999999999997666789999999999999888776542 222 578888888631 11110 00 01
Q ss_pred hhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeeccccccccccc---ccccccchh
Q 023261 76 IRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYF---SDEFWSDRE 152 (285)
Q Consensus 76 ~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~---~~~~~~~~~ 152 (285)
....++|+.+|+||+||++||+ ++||||||+|+||++||++||++||+|+ ++||+++|......+. ....+++|.
T Consensus 396 ~~~~~~S~~~y~Rl~ipellp~-l~KvLYLD~DvVV~~DL~eL~~iDl~~~-v~aaVedC~~~~~~~~~~~~~lnfs~p~ 473 (603)
T PLN02718 396 HDPRYISALNHARFYLPDIFPG-LNKIVLFDHDVVVQRDLSRLWSLDMKGK-VVGAVETCLEGEPSFRSMDTFINFSDPW 473 (603)
T ss_pred cccccccHHHHHHHHHHHHhcc-cCEEEEEECCEEecCCHHHHhcCCCCCc-EEEEeccccccccchhhhhhhhhccchh
Confidence 1234678899999999999996 9999999999999999999999999976 7888888864221111 111133343
Q ss_pred hhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCcc
Q 023261 153 FSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNV 232 (285)
Q Consensus 153 ~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~ 232 (285)
+.+.+ .++.+|||+|||||||++||++++++++..|++.+.++..|+++.++++|++|.|+++.||++||+++.|++..
T Consensus 474 i~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~ 552 (603)
T PLN02718 474 VAKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESG 552 (603)
T ss_pred hhccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCcccccc
Confidence 33333 45789999999999999999999999999999887665566555555566999999999999999998776432
Q ss_pred cccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 233 ENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 233 ~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
... ...++++||||+|+.|||...... .|+++|.+|.....+
T Consensus 553 i~~---~~i~~aaIIHYnG~~KPWle~~i~---~yr~~W~k~v~~~~~ 594 (603)
T PLN02718 553 VGA---SDIEQAAVIHYDGVMKPWLDIGIG---KYKRYWNIHVPYHHP 594 (603)
T ss_pred ccc---cccCCCEEEEECCCCCccccCChh---hHHHHHHhhcCCCCh
Confidence 221 124678999999999999987654 499999999887653
No 5
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=2.6e-47 Score=348.12 Aligned_cols=262 Identities=25% Similarity=0.498 Sum_probs=192.6
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecch-hhhc-------ccccc-----
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFRE-KFVT-------GLISS----- 74 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~-~~~~-------~~~~~----- 74 (285)
+.+++|++.|++.|++++.+++|||+||+++...++.+..+ ....++.|++..++. +.+. +....
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~--n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~ 335 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKM--RDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQK 335 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhh--CCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhh
Confidence 88999999999999988899999999999998876665433 112256777777763 2111 00000
Q ss_pred ---------------h---hhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccc
Q 023261 75 ---------------S---IRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCH 136 (285)
Q Consensus 75 ---------------~---~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~ 136 (285)
. ...+++|+.+|+||+||++||+ ++||||||+||||++||++||++||+|+ ++||+++|.
T Consensus 336 ~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~-ldKVLYLD~DVVVq~DLseLw~iDL~gk-v~aAVeDc~ 413 (559)
T PLN02523 336 FYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPK-LHRILFLDDDVVVQKDLTGLWKIDMDGK-VNGAVETCF 413 (559)
T ss_pred hhccccccccccccccccccCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEecCCHHHHHhCcCCCc-eEEEehhhh
Confidence 0 0024567899999999999995 9999999999999999999999999976 788888885
Q ss_pred cccccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCee
Q 023261 137 ANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVE 216 (285)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~ 216 (285)
..+..+.....+.+|.+++-+ ..+.||||+||||||+++||++++++++..|.+.+.+...++++.+++.|++|.|+++
T Consensus 414 ~~~~r~~~~ln~s~p~i~~yF-Ns~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~gri~ 492 (559)
T PLN02523 414 GSFHRYAQYLNFSHPLIKEKF-NPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYSTTK 492 (559)
T ss_pred hHHHHHHHhhcccchhhhhCc-CCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcCceE
Confidence 433322222223444444333 4578999999999999999999999998766655444444543333344689999999
Q ss_pred ecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 217 AIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 217 ~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
+||++||+++.|+..... ....++++||||+|+.|||..... .+++++|++|...+.+
T Consensus 493 ~LD~rWNvlglGy~~~i~---~~~i~~paIIHYnG~~KPWle~~i---~~yr~~W~kYl~~~~~ 550 (559)
T PLN02523 493 PLDKSWHVLGLGYNPSIS---MDEIRNAAVIHFNGNMKPWLDIAM---NQFKPLWTKYVDYDME 550 (559)
T ss_pred ecCchhhccCCccCCCcc---ccccCCCEEEEECCCCCccccCCC---CcchHHHHHHHccCCH
Confidence 999999999877643211 112357899999999999987654 2589999999887653
No 6
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.1e-46 Score=331.76 Aligned_cols=259 Identities=19% Similarity=0.280 Sum_probs=195.1
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
||+|+||+.+++|+|+||+.|++. ..+.||++++|+++|++++|+++..+ | +..+..+.+|.+.+...++ .+++
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~-f-~~~i~~~~id~~~~~~~~~---~~~~ 80 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEP-F-KSFIVLEVIDIEPFLDYPP---FTKR 80 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHh-h-ccceeeEEEechhhhcccc---cccc
Confidence 689999999999999999999973 47999999999999999999999865 3 3455666777677666552 2346
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
+|.++|+||++++++|+ ++|+||||+|+||+|||++||++++++.. +||+.++.... +.+...++.....
T Consensus 81 ~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~~-~aaV~D~~~~~--------~~~~~~~~~~~~~ 150 (325)
T COG1442 81 FSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEYY-LAAVRDVFSHY--------MKEGALRLEKGDL 150 (325)
T ss_pred hHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcce-EEEEeehhhhh--------hhhhhhHhhhccc
Confidence 78899999999999997 79999999999999999999999999765 55544332111 0000111111223
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCcccccccccC
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~ 240 (285)
...|||||||++|+++||++++.++++++++... ..+..+|||+||.+|.+++..||.+||+++..............
T Consensus 151 ~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~--~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~ 228 (325)
T COG1442 151 EGSYFNAGVLLINLKLWREENIFEKLIELLKDKE--NDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYPF 228 (325)
T ss_pred ccccCccceeeehHHHHHHhhhHHHHHHHHhccc--cccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhhccC
Confidence 5789999999999999999999999999886544 34556899999999999999999999999643222211111123
Q ss_pred CCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261 241 AGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS 279 (285)
Q Consensus 241 ~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~ 279 (285)
..++.|+||+|+.|||+...... +-...|.+....+|
T Consensus 229 ~~~~~iiHy~g~~KPW~~~~~~~--~~~~~w~~i~~~~p 265 (325)
T COG1442 229 GDDPVILHYAGPTKPWHSDSSNY--PRSHEWHEILAETP 265 (325)
T ss_pred CCCceEEEecCCCCCCcCccccc--cHHHHHHHHHhcCC
Confidence 45789999999999999887532 11345555544433
No 7
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=6.7e-46 Score=321.10 Aligned_cols=237 Identities=21% Similarity=0.348 Sum_probs=175.5
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
+|+|++|+++++|+++||++|++. .++|||++++++++.++.|+++... .+.+++++.++......... ...+
T Consensus 6 ~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~--~~~~i~~~~~~~~~~~~~~~---~~~~ 78 (246)
T cd00505 6 VATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKL--YNFNYELIPVDILDSVDSEH---LKRP 78 (246)
T ss_pred EecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhc--cCceEEEEeccccCcchhhh---hcCc
Confidence 367889999999999999999874 6999999999999999999887542 24566777665332221111 0235
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeeccccccc-ccccccccccchhhhhccCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANF-TKYFSDEFWSDREFSRVFEG 159 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (285)
+++++|+||++|+++| +++||||||+|+||++||++||++++++. .+||+.++.... ...+. ......
T Consensus 79 ~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~-~~aav~d~~~~~~~~~~~---------~~~~~~ 147 (246)
T cd00505 79 IKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQ-ELAAAPDPGDRREGKYYR---------QKRSHL 147 (246)
T ss_pred cccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCC-eEEEccCchhhhccchhh---------cccCCC
Confidence 6789999999999999 69999999999999999999999999876 555555443211 11110 001112
Q ss_pred CCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCC---eeecCccccccCCCCCcccccc
Q 023261 160 KRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGD---VEAIDHRWNQHGLGGHNVENSC 236 (285)
Q Consensus 160 ~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~---~~~L~~~wN~~~~~~~~~~~~~ 236 (285)
.+..||||||||+|+++||++++.+++.++...... ....+|||+||.+|.++ +..||++||++..+.... ..+
T Consensus 148 ~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~-~~~ 224 (246)
T cd00505 148 AGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLS--SLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRS-LNC 224 (246)
T ss_pred CCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcc--cCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCcccc-ccc
Confidence 346799999999999999988888887766554332 23568999999999998 999999999986433211 111
Q ss_pred cccCCCCceEEEecCCCCCCCC
Q 023261 237 RNLHAGPVSLMHWSGKGKPWVR 258 (285)
Q Consensus 237 ~~~~~~~~~IIHf~g~~KPW~~ 258 (285)
.....++++||||+|+.|||++
T Consensus 225 ~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 225 FKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred hhhhcCCCEEEEeCCCCCCCCC
Confidence 1112457899999999999964
No 8
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=8.1e-46 Score=338.01 Aligned_cols=261 Identities=28% Similarity=0.516 Sum_probs=205.0
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecch-hhhccc--------------
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFRE-KFVTGL-------------- 71 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~-~~~~~~-------------- 71 (285)
+.+++|++.|.+.|+.+|++++|||+||..+-. .++.++.. .++++.++++.++. ..+...
T Consensus 237 vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~---aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~~~~ 313 (534)
T PLN02742 237 ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYG---AMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDSDTQ 313 (534)
T ss_pred chhhhhhhhhhHhhhcCCCcEEEEEeechhhHH---HHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhhhhhh
Confidence 558999999999999988999999999998766 45555543 35567788777753 111110
Q ss_pred ---c--------c--chhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccc
Q 023261 72 ---I--------S--SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHAN 138 (285)
Q Consensus 72 ---~--------~--~~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~ 138 (285)
+ + ...+.+++|+.+|+||+||++||+ ++||||||+|+||++||++||++||+|+ ++||+++|...
T Consensus 314 ~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~-l~KvlYLD~DvVV~~DL~eL~~~DL~~~-viaAVedC~~~ 391 (534)
T PLN02742 314 SYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPA-LEKVVFLDDDVVVQKDLTPLFSIDLHGN-VNGAVETCLET 391 (534)
T ss_pred hhhcccccccccccccccCcccccHHHHHHHHHHHHhhc-cCeEEEEeCCEEecCChHHHhcCCCCCC-EEEEeCchhhh
Confidence 0 0 001145678899999999999995 9999999999999999999999999975 78889999777
Q ss_pred cccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeec
Q 023261 139 FTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAI 218 (285)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L 218 (285)
+..+.....+++|.+++.+ .++.+|||+|||||||++||++++++.+..|++.+.+...|+++.++++.++|.|+++.|
T Consensus 392 f~ry~~yLnfS~p~i~~~f-~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~L 470 (534)
T PLN02742 392 FHRYHKYLNFSHPLISSHF-DPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPL 470 (534)
T ss_pred hhhhhhhhcccchhhhccC-CCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceec
Confidence 7666655567778776544 457899999999999999999999998878887766656776666666667899999999
Q ss_pred CccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 219 DHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 219 ~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
|++||+.++|++.... . -..++++||||+|+.|||...... +++++|++|...+.+
T Consensus 471 D~rWNv~gLG~~~~v~-~--~~i~~aaILHynG~~KPWl~~~i~---~yr~~W~kYl~~s~~ 526 (534)
T PLN02742 471 DRRWHVLGLGYDTNID-P--RLIESAAVLHFNGNMKPWLKLAIE---RYKPLWERYVNYSHP 526 (534)
T ss_pred Chhheecccccccccc-h--hhccCCeEEEECCCCCcccccCCc---ccchHHHHHHccCCH
Confidence 9999999887643211 1 123578999999999999988653 589999999887654
No 9
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=7.1e-46 Score=341.73 Aligned_cols=260 Identities=26% Similarity=0.473 Sum_probs=198.1
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecchhh---------hccccc----
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFREKF---------VTGLIS---- 73 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~~~---------~~~~~~---- 73 (285)
+.+++|++.|.+.|+.+|.+++|||+||.++=..+ +.++.. .+..+.|++..++.-. ++..-+
T Consensus 341 VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM---~~WF~~n~~~~A~v~V~nie~f~wln~~~~pvl~ql~~~~~~ 417 (639)
T PLN02829 341 VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAM---RMWFLVNPPGKATIQVQNIEEFTWLNSSYSPVLKQLGSQSMI 417 (639)
T ss_pred eeEEEeeeehhhhcccCccceEEEEecCccchHHH---HHHHhhCCCccceEEEEehhhcccccccccHHHHHhhhhhhh
Confidence 45789999999999999999999999999887644 444432 2334556555443110 100000
Q ss_pred ---------------chhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccc
Q 023261 74 ---------------SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHAN 138 (285)
Q Consensus 74 ---------------~~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~ 138 (285)
...+..++|..+|+||+||++||+ ++||||||+||||++||++||++||+|+ ++||+++|...
T Consensus 418 ~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~-LdKVLYLD~DVVVqgDLseLw~iDL~gk-viAAVedc~~~ 495 (639)
T PLN02829 418 DYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPK-LNKVLFLDDDIVVQKDLTGLWSIDLKGN-VNGAVETCGES 495 (639)
T ss_pred hhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEeCCChHHHHhCCCCCc-eEEEeccchhh
Confidence 001234678899999999999995 9999999999999999999999999976 78888988766
Q ss_pred cccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeec
Q 023261 139 FTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAI 218 (285)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L 218 (285)
++.+.....+.+|.+...+ ....+|||||||||||++||++++++++..|++.+.++..|+++.++++.++|.|+++.|
T Consensus 496 f~r~~~~l~fs~p~i~~~F-n~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~L 574 (639)
T PLN02829 496 FHRFDRYLNFSNPLISKNF-DPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPL 574 (639)
T ss_pred hhhhhhhhhccchHhhhcc-CCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEec
Confidence 6554444455666665433 357899999999999999999999999999998877666776666555556689999999
Q ss_pred CccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261 219 DHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS 279 (285)
Q Consensus 219 ~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~ 279 (285)
|++||++++|++.... .-..++++||||+|+.|||...... +++++|.+|.....
T Consensus 575 D~rWNv~GLGy~~~v~---~~~i~~aaIIHynG~~KPWle~~i~---~yr~lW~kYl~~~~ 629 (639)
T PLN02829 575 DRSWHVLGLGYNPNVN---QRDIERAAVIHYNGNMKPWLEIGIP---KYRNYWSKYVDYDQ 629 (639)
T ss_pred ChhheecCCCCCcccc---hhcccCCeEEEECCCCCccccCCcc---cchHHHHHHHhcCc
Confidence 9999999888643211 1124578999999999999987653 59999999987654
No 10
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=3e-45 Score=317.53 Aligned_cols=239 Identities=20% Similarity=0.286 Sum_probs=184.4
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
+|+|++|+++++|++.||++|++. +.++|||++++++++.++.|+++... ++..++++.++...+..... ...+
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~--~~~~i~~~~i~~~~~~~~~~---~~~~ 78 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKK--YNSSIEFIKIDNDDFKFFPA---TTDH 78 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHh--cCCeEEEEEcCHHHHhcCCc---cccc
Confidence 589999999999999999999975 57999999999999999999988764 35677888887655443221 1345
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
++..+|+||++|+++| +++||||||+|++|++||++||+++++++ .+||+.++....... .........
T Consensus 79 ~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~-~~aa~~d~~~~~~~~---------~~~~~~~~~ 147 (248)
T cd04194 79 ISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDN-LLAAVRDPFIEQEKK---------RKRRLGGYD 147 (248)
T ss_pred ccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCC-EEEEEecccHHHHHH---------HHhhcCCCc
Confidence 6778999999999999 59999999999999999999999999876 556555443221100 000112234
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCccccc-----
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENS----- 235 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~~~~----- 235 (285)
+..||||||||+|+++||+.++.++++++++.... .+..+||++||.+|.+++..||++||++..........
T Consensus 148 ~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~ 225 (248)
T cd04194 148 DGSYFNSGVLLINLKKWREENITEKLLELIKEYGG--RLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQ 225 (248)
T ss_pred ccceeeecchheeHHHHHHhhhHHHHHHHHHhCCC--ceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhHH
Confidence 67899999999999999999999999999887543 34568999999999999999999999985432111000
Q ss_pred ccccCCCCceEEEecCCCCCCCC
Q 023261 236 CRNLHAGPVSLMHWSGKGKPWVR 258 (285)
Q Consensus 236 ~~~~~~~~~~IIHf~g~~KPW~~ 258 (285)
......++++||||+|+.|||+.
T Consensus 226 ~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 226 ELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred HHHHHhcCCEEEEeCCCCCCCCC
Confidence 00112457899999999999973
No 11
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.1e-44 Score=336.06 Aligned_cols=255 Identities=22% Similarity=0.407 Sum_probs=189.7
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecchhhh--------ccc-------
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFREKFV--------TGL------- 71 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~~~~--------~~~------- 71 (285)
+.+++|++.|.+.|+.+|++++|||+||..+-. .++.++.. .+..+.|++..++.-.+ ...
T Consensus 340 vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~---am~~WF~~n~~~~a~v~v~n~e~~~~~~~~~~~~~~l~~~~~~~ 416 (629)
T PLN02769 340 VLAASVVINSTVVHSRESGNIVFHVLTDAQNYY---AMKHWFDRNSYKEAAVQVLNIEDLILKDLDKFALKQLSLPEEFR 416 (629)
T ss_pred ceeeeeehhhhhhhccCccceEEEEecChhhHH---HHHHHHhcCCCccceEEEeeeeeeeecccchHHHHhhccchhhh
Confidence 457899999999999999999999999987765 45555543 22234444433321111 100
Q ss_pred -------cc--chhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccc
Q 023261 72 -------IS--SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKY 142 (285)
Q Consensus 72 -------~~--~~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~ 142 (285)
.+ ...+.+++|+.+|+||+||++||+ ++||||||+||||++||++||++||+|+ ++||+++|...+..+
T Consensus 417 ~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~-LdKVLYLD~DVVVqgDLseLw~iDL~gk-viAAVedc~~rl~~~ 494 (629)
T PLN02769 417 VSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKK-LKKVVVLDDDVVVQRDLSFLWNLDMGGK-VNGAVQFCGVRLGQL 494 (629)
T ss_pred hhhccCCCCchhccCcccccHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCcHHHHhcCCCCCC-eEEEehhhhhhhhhh
Confidence 00 111345678899999999999995 9999999999999999999999999986 788888885433221
Q ss_pred cccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhc--cccccCCCccchhhhhcCCeeecCc
Q 023261 143 FSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKE--RRIYELGSLPPFLLVFGGDVEAIDH 220 (285)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~~~dq~~lN~~~~~~~~~L~~ 220 (285)
.. .+......++.+||||||||||+++||++++++++..|++.... ...+.+++|+++|++|.++++.||+
T Consensus 495 ~~-------yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~ 567 (629)
T PLN02769 495 KN-------YLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDD 567 (629)
T ss_pred hh-------hhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCH
Confidence 10 11112224568999999999999999999999999998877543 2456778999999999999999999
Q ss_pred cccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 221 RWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 221 ~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
+||++++|+...... . ...+++||||+|+.|||..... ++++++|++|...+.+
T Consensus 568 rWNv~gLG~~~~i~~--~-~i~~paIIHYnG~~KPW~e~~i---~~yr~~W~kYl~~~~~ 621 (629)
T PLN02769 568 RWVLSGLGHDYGIDE--Q-AIKKAAVLHYNGNMKPWLELGI---PKYKKYWKRFLNRDDR 621 (629)
T ss_pred HHccccccccccccc--c-ccCCcEEEEECCCCCCccCCCC---ChHHHHHHHHhccCCh
Confidence 999987776432111 1 2357899999999999987654 2589999999887653
No 12
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-44 Score=329.67 Aligned_cols=257 Identities=24% Similarity=0.498 Sum_probs=190.2
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecchh-h-----------hcc----
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFREK-F-----------VTG---- 70 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~~-~-----------~~~---- 70 (285)
+.+++|++.|.+.|+.+|+++.|||+||..+=..+ +.++.. .+..+.|++..++.- . ++.
T Consensus 216 vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM---~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~ 292 (533)
T PLN02870 216 ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGM---HSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGI 292 (533)
T ss_pred eeEEEeeeehhhhcccCccceEEEEecCccccHHH---HHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHH
Confidence 45788999999999999999999999999887644 444432 233455555444310 0 000
Q ss_pred --cc-c--------------------chhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCc
Q 023261 71 --LI-S--------------------SSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGR 127 (285)
Q Consensus 71 --~~-~--------------------~~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~ 127 (285)
.+ + ...+.+++|+.+|+||+||++||+ ++||||||+|+||++||++||++||+|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~-LdKVLYLD~DVVVqgDLseLw~iDL~gk- 370 (533)
T PLN02870 293 RNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPN-LDKVVFLDDDVVIQRDLSPLWDIDLGGK- 370 (533)
T ss_pred HHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCcHHHHhhCCCCCc-
Confidence 00 0 001245678899999999999995 9999999999999999999999999976
Q ss_pred eeeeecccccc--------cccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccc
Q 023261 128 TIGAPEYCHAN--------FTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIY 199 (285)
Q Consensus 128 ~~aa~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~ 199 (285)
++||+++|... ...|++ +++|.+...+ .++.+|||||||||||++||++++++++.+|++.+.... .
T Consensus 371 viaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i~~~f-d~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~-l 445 (533)
T PLN02870 371 VNGAVETCRGEDEWVMSKRFRNYFN---FSHPLIAKNL-DPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSN-L 445 (533)
T ss_pred eEEEEccccccchhhhhhhhhhhcc---cccchhhccc-CcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcC-c
Confidence 78888887431 112222 4555554433 457999999999999999999999999999998764321 2
Q ss_pred cCCCccch---hhhhcCCeeecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCcccccc
Q 023261 200 ELGSLPPF---LLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDL 276 (285)
Q Consensus 200 ~~~dq~~l---N~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~ 276 (285)
.+.||++| |++|.|++++||.+||+++++++... . ....++++||||+|+.|||...... +++.+|.+|..
T Consensus 446 ~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~~-~--~~~i~~aaIIHY~G~~KPW~~~~~~---~yr~~W~kYl~ 519 (533)
T PLN02870 446 TMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKT-N--IESVKKAAVIHYNGQSKPWLEIGFE---HLRPFWTKYVN 519 (533)
T ss_pred eecccccccHhHHHhcCceEECChHHhcCCCCCcccc-c--ccccCCcEEEEECCCCCCccccCcc---chhHHHHHHHc
Confidence 23577777 68999999999999999887764321 1 1124578999999999999876542 58999999988
Q ss_pred CCCC
Q 023261 277 YNSH 280 (285)
Q Consensus 277 ~~~~ 280 (285)
.+.+
T Consensus 520 ~s~~ 523 (533)
T PLN02870 520 YSND 523 (533)
T ss_pred cCch
Confidence 7654
No 13
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=3.2e-44 Score=326.92 Aligned_cols=260 Identities=22% Similarity=0.437 Sum_probs=188.9
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecch-h-----------hhcc----
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFRE-K-----------FVTG---- 70 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~-~-----------~~~~---- 70 (285)
+.+++|++.|.+.|+.+|++++|||+||.++=..+ +.++.. .+..+.|++..++. + +++.
T Consensus 217 vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM---~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~ 293 (534)
T PLN02659 217 ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPM---QAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRV 293 (534)
T ss_pred eeEEEeeeehhhhcccCccceEEEEecCccccHHH---HHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhh
Confidence 45789999999999999999999999999887644 444432 23345555544431 1 0110
Q ss_pred --ccc-------------c--------hhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCc
Q 023261 71 --LIS-------------S--------SIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGR 127 (285)
Q Consensus 71 --~~~-------------~--------~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~ 127 (285)
.+. + ..+.++.|..+|+||+||++||+ ++||||||+||||++||++||++||+|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP~-LdKVLYLD~DVVVqgDLseLw~iDL~gk- 371 (534)
T PLN02659 294 RSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFPS-LNKVVFLDDDIVVQTDLSPLWDIDMNGK- 371 (534)
T ss_pred hhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhhh-cCeEEEeeCCEEEcCchHHHHhCCCCCc-
Confidence 000 0 01234567789999999999995 9999999999999999999999999986
Q ss_pred eeeeecccccc--c---ccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCC
Q 023261 128 TIGAPEYCHAN--F---TKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELG 202 (285)
Q Consensus 128 ~~aa~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 202 (285)
++||+++|... + .++.....+.+|.+... ...+.+|||||||||||++||++++++++.+|++.+.+.. ....
T Consensus 372 v~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~y-Fn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~-l~l~ 449 (534)
T PLN02659 372 VNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKN-FDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSD-LSLW 449 (534)
T ss_pred EEEEeeccccccchhhhHHHHHhhcccchhhhhc-cCccccceecceeEeeHHHHHhcChHHHHHHHHHhccccc-cccc
Confidence 78888877431 1 11111111233444332 2456889999999999999999999999999998764322 2234
Q ss_pred Cccch---hhhhcCCeeecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261 203 SLPPF---LLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS 279 (285)
Q Consensus 203 dq~~l---N~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~ 279 (285)
||++| |++|.|+++.||.+||+.+.+++.. ... . ..++++||||+|+.|||...... +++++|.+|...+.
T Consensus 450 DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~-~~~-~-~i~~paIIHYnG~~KPW~~~~~~---~yr~~W~kYl~~s~ 523 (534)
T PLN02659 450 QLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQEN-TSL-A-DAESAGVVHFNGRAKPWLDIAFP---QLRPLWAKYIDSSD 523 (534)
T ss_pred ccccchHHHHHhcCCEEECChhheecCCccccc-ccc-c-ccCCcEEEEECCCCCccccccCC---cchhHHHHHhccCC
Confidence 78888 6889999999999999987765421 111 1 23578999999999999988653 69999999988765
Q ss_pred C
Q 023261 280 H 280 (285)
Q Consensus 280 ~ 280 (285)
+
T Consensus 524 ~ 524 (534)
T PLN02659 524 K 524 (534)
T ss_pred H
Confidence 4
No 14
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=5.7e-44 Score=328.68 Aligned_cols=258 Identities=23% Similarity=0.430 Sum_probs=196.3
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecchhh---------hcc-------
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFREKF---------VTG------- 70 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~~~---------~~~------- 70 (285)
+.+++|++.|.+.|+.+|++++|||+||.++=..+ +.++.. .+..+.|++..++.-. ++.
T Consensus 355 VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM---~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~~ 431 (657)
T PLN02910 355 VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAM---KMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARIK 431 (657)
T ss_pred eeeEEeehhhhhhcccCccceEEEEecCccccHHH---HHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhhh
Confidence 45789999999999999999999999999887644 444432 2324555554443110 000
Q ss_pred --ccc-----------ch---hhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecc
Q 023261 71 --LIS-----------SS---IRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEY 134 (285)
Q Consensus 71 --~~~-----------~~---~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~ 134 (285)
.+. .. .+..+.|+.+|+||+||++||+ ++||||||+|+||++||++||++|++|+ ++||+++
T Consensus 432 ~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~-l~KVLYLD~DVVV~gDLseLw~iDL~g~-v~AAVed 509 (657)
T PLN02910 432 EYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPK-LEKILFLDDDIVVQKDLTPLWSIDMQGM-VNGAVET 509 (657)
T ss_pred hhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCchHHHHhCCcCCc-eEEEecc
Confidence 000 00 1134567889999999999995 9999999999999999999999999986 7888898
Q ss_pred cccccccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchh---hhh
Q 023261 135 CHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFL---LVF 211 (285)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN---~~~ 211 (285)
|..++..+.....+.+|.+.+.+ .++.||||+|||||||++||++++++.+..|++.+.+...| ||+.|| ++|
T Consensus 510 c~~~f~r~~~ylnfs~P~i~~yF-Ns~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~---dqgsLPpgLLvF 585 (657)
T PLN02910 510 CKESFHRFDKYLNFSNPKISENF-DPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLW---KLGSLPPGLITF 585 (657)
T ss_pred cchhhhhhhhhhccCChhhhhcc-CCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhccccccc---ccCCCChHHHHH
Confidence 98766555555557777776533 45799999999999999999999999777677766555556 455566 799
Q ss_pred cCCeeecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 212 GGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 212 ~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
.|++++||++||++++|++.....+ ..++++||||+|..|||...... +|+++|.+|...+.+
T Consensus 586 ~g~i~pLD~rWNv~GLGyd~~v~~~---~i~~AAVLHynG~~KPWl~l~i~---~Yr~~W~kYl~~d~~ 648 (657)
T PLN02910 586 YNLTYPLDRSWHVLGLGYDPALNQT---EIENAAVVHYNGNYKPWLDLAIA---KYKPYWSRYVQYDNP 648 (657)
T ss_pred hCceeecCchheecCCCCCcccccc---cccCcEEEEeCCCCCcccccCcc---cchHHHHHHccCCCh
Confidence 9999999999999998876433221 24578999999999999987653 599999999876543
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=2.4e-43 Score=322.50 Aligned_cols=261 Identities=23% Similarity=0.416 Sum_probs=185.4
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHh-hCCCceEEEEecchhh------------hcc-c--
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRS-AFPYLSFQVYLFREKF------------VTG-L-- 71 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~-~~~~~~i~~~~~~~~~------------~~~-~-- 71 (285)
+.+++|++.|.+.|+.+|++++|||+||..+=..+ +.++.. .+..+.|++..++.-. ++. .
T Consensus 221 vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM---~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~ 297 (535)
T PLN02867 221 VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPM---HAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLI 297 (535)
T ss_pred eeEEEeeeehhhhcccCccceEEEEecCccccHHH---HHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhh
Confidence 45788999999999999999999999999887644 444432 2224455554443110 000 0
Q ss_pred ---------------------ccchhhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceee
Q 023261 72 ---------------------ISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIG 130 (285)
Q Consensus 72 ---------------------~~~~~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~a 130 (285)
.....++++.|..+|+||+||++||+ ++||||||+||||++||++||++||+|+. +|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP~-LdKVLYLD~DVVVqgDLseLwdiDL~gkv-ia 375 (535)
T PLN02867 298 WSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFPD-LNKIVFLDDDVVVQHDLSSLWELDLNGKV-VG 375 (535)
T ss_pred hhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhhc-cCeEEEecCCEEEcCchHHHHhCcCCCCe-EE
Confidence 00012234568899999999999995 99999999999999999999999999874 55
Q ss_pred eecc--ccccc---ccccccccccchhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCcc
Q 023261 131 APEY--CHANF---TKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLP 205 (285)
Q Consensus 131 a~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~ 205 (285)
|+.+ |.... ..+.....+++|.+...+ .++.+||||||||||+++||++++++++.+|++.+.+.. ..+.||+
T Consensus 376 AV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~-~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~-~~l~dqd 453 (535)
T PLN02867 376 AVVDSWCGDNCCPGRKYKDYLNFSHPLISSNL-DQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSG-LQLWQPG 453 (535)
T ss_pred EEeccccccccccchhhhhhccccchhhhccC-CCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcc-ccccccc
Confidence 5432 32111 111111123444443222 457899999999999999999999999999999865421 1234788
Q ss_pred chhh---hhcCCeeecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261 206 PFLL---VFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280 (285)
Q Consensus 206 ~lN~---~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~ 280 (285)
.||. +|.|++++||++||+++.+++.... . ....++++||||+|+.|||+..... +++++|.+|...+..
T Consensus 454 ~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~~-~-~~~i~~paIIHYnG~~KPW~e~~~~---~yR~~W~kyl~~~~~ 526 (535)
T PLN02867 454 ALPPALLAFKGHVHPIDPSWHVAGLGSRPPEV-P-REILESAAVLHFSGPAKPWLEIGFP---EVRSLWYRHVNFSDK 526 (535)
T ss_pred ccchHHHHhcCcEEECChhhcccCCCcccccc-h-hhhcCCcEEEEECCCCCcccccCCC---chhHHHHHhcCccch
Confidence 8884 8999999999999998766542111 1 1123578999999999999988653 699999999876643
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=6.3e-42 Score=295.61 Aligned_cols=246 Identities=23% Similarity=0.406 Sum_probs=164.6
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
|++|.+|+.+++|+++||++|++++..++||+++++++++.++.|++...+ +.... .+...+...............+
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAE-VIEIE-PIEFPDISMLEEFQFNSPSKRH 81 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCC-CCTTE-CEEETSGGHHH--TTS-HCCTC
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhccc-cccee-eeccchHHhhhhhhhccccccc
Confidence 589999999999999999999986578999999999999998888766432 21111 1223332222211111223456
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
+++.+|+||+++++|++ ++||||||+||+|.+||++||++++++. .+||++++. +.... +............
T Consensus 82 ~~~~~~~rl~i~~ll~~-~drilyLD~D~lv~~dl~~lf~~~~~~~-~~~a~~~~~--~~~~~----~~~~~~~~~~~~~ 153 (250)
T PF01501_consen 82 FSPATFARLFIPDLLPD-YDRILYLDADTLVLGDLDELFDLDLQGK-YLAAVEDES--FDNFP----NKRFPFSERKQPG 153 (250)
T ss_dssp GGGGGGGGGGHHHHSTT-SSEEEEE-TTEEESS-SHHHHC---TTS-SEEEEE------HHHH----TSTTSSEEECEST
T ss_pred ccHHHHHHhhhHHHHhh-cCeEEEEcCCeeeecChhhhhcccchhh-hccccccch--hhhhh----hcccchhhcccCc
Confidence 67899999999999985 9999999999999999999999999965 566655411 11100 0000000111234
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCcccccccccC
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~ 240 (285)
...||||||||+|+++||++++.++++++++.... ....+||++||.+|.++++.||++||++..+. +.........
T Consensus 154 ~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~~~~ 230 (250)
T PF01501_consen 154 NKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYFNPI 230 (250)
T ss_dssp TTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHHHHH
T ss_pred ccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhhHhh
Confidence 58999999999999999999999999988766443 34568999999999999999999999985432 0111111112
Q ss_pred CCCceEEEecCCCCCCCCC
Q 023261 241 AGPVSLMHWSGKGKPWVRL 259 (285)
Q Consensus 241 ~~~~~IIHf~g~~KPW~~~ 259 (285)
.++++||||+|..|||...
T Consensus 231 ~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 231 LEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp GCC-SEEE--SSS-TTSTT
T ss_pred cCCeEEEEeCCCCcCCCCC
Confidence 3578999999999999864
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.5e-40 Score=289.73 Aligned_cols=253 Identities=14% Similarity=0.228 Sum_probs=171.8
Q ss_pred CCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCC-CCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 2 TLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAE-SSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 2 ~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~-~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
||+++ +..+.|+|+|++.++. ..++|||++++ ++++..++|+++.......+..+++.+. +...- .......
T Consensus 7 ~~g~~-~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~---~P~~~-~~~ws~l 79 (304)
T cd06430 7 ACGER-LEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPIT---FPSGN-AAEWKKL 79 (304)
T ss_pred EcCCc-HHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEe---cCccc-hhhhhhc
Confidence 56666 8999999999999985 67999999998 6666666688774321112222344332 11000 0012345
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhcc--CCCCCceeeeecccccccccccccccccchhhhhccC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRI--PLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFE 158 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~--dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (285)
+++.+|+||++|++|| ++|||||||+|+||.+||++||++ ++++..++|++.+.......++. ......
T Consensus 80 ~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~-------~~~~~~- 150 (304)
T cd06430 80 FKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYN-------RFARHP- 150 (304)
T ss_pred ccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhh-------hhcccC-
Confidence 6679999999999999 599999999999999999999999 99987677765422111111221 000010
Q ss_pred CCCCceeeeeeeeeehhhhhh-----------hchHHHHHHHHHHhhccccccCCCccchhhhhcCC---eeecCccccc
Q 023261 159 GKRPCYFNTGVMVMDLVRWRE-----------GDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGD---VEAIDHRWNQ 224 (285)
Q Consensus 159 ~~~~~yfNsGVml~nl~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~---~~~L~~~wN~ 224 (285)
..+..+|||||||+||++||+ .+++++++++++..... ..++|||+||.+|.++ ++.||++||+
T Consensus 151 ~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~ 228 (304)
T cd06430 151 YYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLK--ITWGDQDLINIIFHHNPEMLYVFPCHWNY 228 (304)
T ss_pred cccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccC--CCCCCHHHHHHHHcCCCCeEEEcCccccC
Confidence 112357999999999999999 77899999888765532 3468999999999987 9999999998
Q ss_pred cCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCC
Q 023261 225 HGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYN 278 (285)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~ 278 (285)
+..... ....|.....+.++|||++++.| +... ...++.++..+.+++
T Consensus 229 ~~d~~~-y~~~~~~~~~~~~~~~H~n~~~~--~~~~---~~~f~~~~~~~~~~~ 276 (304)
T cd06430 229 RPDHCM-YGSNCKAAEEEGVFILHGNRGVY--HSDK---QPAFRAVYEAIREYT 276 (304)
T ss_pred Ccccee-ecccccccccccceEEEcCCCCC--CCcc---chHHHHHHHHHHhcc
Confidence 753211 11123222345789999998666 2221 123777776666554
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=1.3e-39 Score=280.72 Aligned_cols=229 Identities=16% Similarity=0.218 Sum_probs=166.4
Q ss_pred CCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecc-hhhhcccccchhhhhc
Q 023261 2 TLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFR-EKFVTGLISSSIRRAL 80 (285)
Q Consensus 2 ~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 80 (285)
++|++|+++++|++.||++|+. ..++|||+++++|++.++.|+++.++. +.+++++.++ +..+...... .+
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~--~~~i~~i~i~~~~~~~~~~~~----~~ 78 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEY--GFEYELVTYKWPRWLHKQTEK----QR 78 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHh--CCceEEEEecChhhhhccccc----ch
Confidence 5789999999999999999985 569999999999999999999987653 3567777776 2322221111 01
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
..++|.||+++++||++++||||||+|+||.+||++||++|++|+ ++||+++|.... .......|........+ .
T Consensus 79 -~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~-~~Aav~d~~~~~-~~~~~~~~~~~~~~~~l--~ 153 (248)
T cd06432 79 -IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGA-PYGYTPFCDSRK-EMDGFRFWKQGYWKSHL--R 153 (248)
T ss_pred -hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCC-eEEEeeccccch-hcccchhhhhhhhhhhc--C
Confidence 135789999999999779999999999999999999999999976 677766554211 00000111110001111 2
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhc-cccccCCCccchhhhhcCC-eeecCccccccC-CCCCccccccc
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKE-RRIYELGSLPPFLLVFGGD-VEAIDHRWNQHG-LGGHNVENSCR 237 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~-~~~~~~~dq~~lN~~~~~~-~~~L~~~wN~~~-~~~~~~~~~~~ 237 (285)
+..||||||||+||++||+++++++++++++.... ...+.++|||+||.++.++ ++.||++||++- ...+
T Consensus 154 ~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~~~------- 226 (248)
T cd06432 154 GRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWCSD------- 226 (248)
T ss_pred CCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHhcc-------
Confidence 35699999999999999999999977766654322 2234567999999999886 999999999983 2222
Q ss_pred ccCCCCceEEEecC
Q 023261 238 NLHAGPVSLMHWSG 251 (285)
Q Consensus 238 ~~~~~~~~IIHf~g 251 (285)
.....+.+|||..
T Consensus 227 -~~~~~~~~~~~~~ 239 (248)
T cd06432 227 -ESKKKAKTIDLCN 239 (248)
T ss_pred -cccCccceeeccc
Confidence 1234678999986
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.8e-33 Score=242.29 Aligned_cols=208 Identities=18% Similarity=0.283 Sum_probs=145.0
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEE-eCCCCcccHHHHHHHHHhhCCCceEE-EEecchhhhcccccchhhh
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFI-AAESSPANTNDLAQTVRSAFPYLSFQ-VYLFREKFVTGLISSSIRR 78 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~-~~~~~~~~~~~L~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~ 78 (285)
+++|++|+.+++|+++||++|+++ +.++++ +++++++.++.|++.. .++. +..++....... . .
T Consensus 6 ~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~------~~~~~v~~i~~~~~~~~-~----~ 71 (240)
T cd02537 6 LLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVG------WIVREVEPIDPPDSANL-L----K 71 (240)
T ss_pred EecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcC------CEEEecCccCCcchhhh-c----c
Confidence 468999999999999999999863 455555 4579999888887642 2221 111221110000 0 1
Q ss_pred hccCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccC
Q 023261 79 ALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFE 158 (285)
Q Consensus 79 ~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (285)
..++..+|.||+++++.+ ++||||||+|++|.+||++||++ ++.++|+.+ +.
T Consensus 72 ~~~~~~~~~kl~~~~l~~--~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d-~~---------------------- 123 (240)
T cd02537 72 RPRFKDTYTKLRLWNLTE--YDKVVFLDADTLVLRNIDELFDL---PGEFAAAPD-CG---------------------- 123 (240)
T ss_pred chHHHHHhHHHHhccccc--cceEEEEeCCeeEccCHHHHhCC---CCceeeecc-cC----------------------
Confidence 133457899999999753 89999999999999999999987 344555543 10
Q ss_pred CCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCC--eeecCccccccCCCCCcccccc
Q 023261 159 GKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGD--VEAIDHRWNQHGLGGHNVENSC 236 (285)
Q Consensus 159 ~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~--~~~L~~~wN~~~~~~~~~~~~~ 236 (285)
...|||||||++|+++ ...+++++++..... +..+||++||.+|.++ ++.||++||++..........
T Consensus 124 --~~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~---~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~- 193 (240)
T cd02537 124 --WPDLFNSGVFVLKPSE----ETFNDLLDALQDTPS---FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEA- 193 (240)
T ss_pred --ccccccceEEEEcCCH----HHHHHHHHHHhccCC---CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchh-
Confidence 0358999999999964 455666666654332 4568999999999999 999999999984322211110
Q ss_pred cccCCCCceEEEecCCCCCCCCCCC
Q 023261 237 RNLHAGPVSLMHWSGKGKPWVRLDA 261 (285)
Q Consensus 237 ~~~~~~~~~IIHf~g~~KPW~~~~~ 261 (285)
.....+++||||+|+.|||+....
T Consensus 194 -~~~~~~~~iiHf~g~~KPW~~~~~ 217 (240)
T cd02537 194 -LWFGDEIKVVHFIGGDKPWSWWRD 217 (240)
T ss_pred -hcccCCcEEEEEeCCCCCCCCCcC
Confidence 012357899999999999987654
No 20
>PLN00176 galactinol synthase
Probab=100.00 E-value=2.7e-32 Score=241.42 Aligned_cols=232 Identities=16% Similarity=0.253 Sum_probs=145.5
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
+++|++|+.++.|+++||+++.+ ..++.+ +++++++++..+.|++. + ..+ ..++.-..... .......
T Consensus 29 L~~n~~Y~~Ga~vL~~SLr~~~s-~~~lVv-lVt~dVp~e~r~~L~~~----g--~~V--~~V~~i~~~~~-~~~~~~~- 96 (333)
T PLN00176 29 LAGNGDYVKGVVGLAKGLRKVKS-AYPLVV-AVLPDVPEEHRRILVSQ----G--CIV--REIEPVYPPEN-QTQFAMA- 96 (333)
T ss_pred EecCcchHHHHHHHHHHHHHhCC-CCCEEE-EECCCCCHHHHHHHHHc----C--CEE--EEecccCCccc-ccccccc-
Confidence 36799999999999999998865 345554 45789999877676543 2 222 22221000000 0000000
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccc-cccccccc-----cch-hh
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFT-KYFSDEFW-----SDR-EF 153 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~-~~~~~~~~-----~~~-~~ 153 (285)
....+|.||.++++.. ++||||||+|+||.++|++||+++. +.++||.+ |..+.. .... ..| ..+ .+
T Consensus 97 ~~~i~~tKl~iw~l~~--ydkvlyLDaD~lv~~nid~Lf~~~~--~~~aAV~d-c~~~~~~~~~p-~~~~~~c~~~~~~~ 170 (333)
T PLN00176 97 YYVINYSKLRIWEFVE--YSKMIYLDGDIQVFENIDHLFDLPD--GYFYAVMD-CFCEKTWSHTP-QYKIGYCQQCPDKV 170 (333)
T ss_pred hhhhhhhhhhhccccc--cceEEEecCCEEeecChHHHhcCCC--cceEEEec-ccccccccccc-cccccccccchhhc
Confidence 1125788999999773 8999999999999999999998843 34555544 433211 0000 000 000 00
Q ss_pred h--hccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCc
Q 023261 154 S--RVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHN 231 (285)
Q Consensus 154 ~--~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~ 231 (285)
. .....+...||||||||+|+++|+.+.+. +++..... ..++|||+||.+|.++|++||.+||++......
T Consensus 171 ~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll----~~l~~~~~---~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~ 243 (333)
T PLN00176 171 TWPAELGPPPPLYFNAGMFVFEPSLSTYEDLL----ETLKITPP---TPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWR 243 (333)
T ss_pred cchhhccCCCCCeEEeEEEEEEcCHHHHHHHH----HHHHhcCC---CCCCCHHHHHHHHcCcEEECCchhcCchhhhhh
Confidence 0 01112346799999999999999876544 44544322 356899999999999999999999998321111
Q ss_pred ccccccccCCCCceEEEecC-CCCCCCCCC
Q 023261 232 VENSCRNLHAGPVSLMHWSG-KGKPWVRLD 260 (285)
Q Consensus 232 ~~~~~~~~~~~~~~IIHf~g-~~KPW~~~~ 260 (285)
... ....++++||||+| ..|||+...
T Consensus 244 ~~~---~~~~~~vkIIHY~~~~~KPW~~~~ 270 (333)
T PLN00176 244 HPE---NVELDKVKVVHYCAAGSKPWRYTG 270 (333)
T ss_pred Chh---hcccCCcEEEEeeCCCCCCCCCCC
Confidence 111 11235789999996 589998543
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.95 E-value=4.2e-27 Score=203.92 Aligned_cols=214 Identities=16% Similarity=0.167 Sum_probs=143.6
Q ss_pred CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261 1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL 80 (285)
Q Consensus 1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 80 (285)
+++++.|+.++.++.+||.+..+. .++. .+++++.+......+...... .....+.+..++.....+ ....
T Consensus 6 l~Tn~~YL~gAlvL~~sLr~~gs~-~dlV-vLvt~~~~~~~~~~~~~~~~~-l~~~~~~v~~v~~~~~~~------~~~~ 76 (278)
T cd06914 6 YATNADYLCNALILFEQLRRLGSK-AKLV-LLVPETLLDRNLDDFVRRDLL-LARDKVIVKLIPVIIASG------GDAY 76 (278)
T ss_pred EecChhHHHHHHHHHHHHHHhCCC-CCEE-EEECCCCChhhhhhHHHHHHH-hhccCcEEEEcCcccCCC------CCcc
Confidence 367999999999999999998873 3333 356777776544433221111 011223333333211111 1112
Q ss_pred cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261 81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK 160 (285)
Q Consensus 81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (285)
++ .+|.||.++++ ++ ++||||||+|++|.++|++||+++.. . .+||+..
T Consensus 77 ~~-~~~tKl~~~~l-~~-y~kvlyLDaD~l~~~~ideLf~~~~~-~-~~Aap~~-------------------------- 125 (278)
T cd06914 77 WA-KSLTKLRAFNQ-TE-YDRIIYFDSDSIIRHPMDELFFLPNY-I-KFAAPRA-------------------------- 125 (278)
T ss_pred HH-HHHHHHHhccc-cc-eeeEEEecCChhhhcChHHHhcCCcc-c-ceeeecC--------------------------
Confidence 32 46999999998 44 99999999999999999999998743 2 2555441
Q ss_pred CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCC-------eeecCcc-ccccCCCCCcc
Q 023261 161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGD-------VEAIDHR-WNQHGLGGHNV 232 (285)
Q Consensus 161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~-------~~~L~~~-wN~~~~~~~~~ 232 (285)
..||||||||||+++|+.+++.+++.++..... ..+||++||.+|.+. +..||.+ ||+++...++.
T Consensus 126 -~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~-----~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 126 -YWKFASHLMVIKPSKEAFKELMTEILPAYLNKK-----NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred -cceecceeEEEeCCHHHHHHHHHHHHHhcccCC-----CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 128999999999999999999888766543211 346999999999999 9999996 99985321111
Q ss_pred -----ccc----ccccC----CCCceEEEecCC--CCCCCCCC
Q 023261 233 -----ENS----CRNLH----AGPVSLMHWSGK--GKPWVRLD 260 (285)
Q Consensus 233 -----~~~----~~~~~----~~~~~IIHf~g~--~KPW~~~~ 260 (285)
.+. .+... ..++++|||+.. +|||....
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 010 10100 146799999985 79998764
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.38 E-value=3.1e-12 Score=126.23 Aligned_cols=235 Identities=16% Similarity=0.270 Sum_probs=157.5
Q ss_pred CCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecc-hhhhcccccchhhhhcc
Q 023261 3 LDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFR-EKFVTGLISSSIRRALD 81 (285)
Q Consensus 3 ~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~ 81 (285)
.-.-|-+.+..+|.|+++|++.+ +.|+++-.-+|+.-.+.+-.+.+++. .+.++++.. +..+.+.-.. ++
T Consensus 1189 SGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYn--FeyElv~YkWPrWLhqQ~EK---QR-- 1259 (1470)
T KOG1879|consen 1189 SGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYN--FEYELVQYKWPRWLHQQTEK---QR-- 1259 (1470)
T ss_pred cccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhC--ceEEEEEecCchhhhhhhhh---hh--
Confidence 34568889999999999999855 99999999999987777666655543 333333222 2333322111 11
Q ss_pred CchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCCC
Q 023261 82 SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKR 161 (285)
Q Consensus 82 s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (285)
-.+.|--||+.-+||.+++||||+|+|-||+.||.||.++|++|. ..|=...|..+ .++=+..+|+....++.+ .+
T Consensus 1260 iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~Ga-PygYtPfCdsR-~EMDGyRFWK~GYW~~hL--~g 1335 (1470)
T KOG1879|consen 1260 IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGA-PYGYTPFCDSR-REMDGYRFWKQGYWKKHL--RG 1335 (1470)
T ss_pred hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCC-ccccCcccccc-ccccchhHHhhhHHHHHh--cc
Confidence 136788888989999999999999999999999999999999974 45544445432 122233467655444444 34
Q ss_pred CceeeeeeeeeehhhhhhhchHHHHHHHHHHhh-ccccccCCCccchhhh-hcCCeeecCccccccCCCCCccccccccc
Q 023261 162 PCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQK-ERRIYELGSLPPFLLV-FGGDVEAIDHRWNQHGLGGHNVENSCRNL 239 (285)
Q Consensus 162 ~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~-~~~~~~~~dq~~lN~~-~~~~~~~L~~~wN~~~~~~~~~~~~~~~~ 239 (285)
..|--|...|+||++.|+-.-.++++-...... +.....--|||+=|.+ ..-.|+.||..|-.+....+. .
T Consensus 1336 rkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCETWC~d-------~ 1408 (1470)
T KOG1879|consen 1336 RKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCETWCDD-------E 1408 (1470)
T ss_pred CccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhhhhcCc-------h
Confidence 789999999999999999988888764444332 3333333478877655 567899999998775322111 1
Q ss_pred CCCCceEEEecCCCCCCCCC
Q 023261 240 HAGPVSLMHWSGKGKPWVRL 259 (285)
Q Consensus 240 ~~~~~~IIHf~g~~KPW~~~ 259 (285)
.++++++|--+. -||-+.
T Consensus 1409 skkkAktIDLCn--NP~TKE 1426 (1470)
T KOG1879|consen 1409 SKKKAKTIDLCN--NPLTKE 1426 (1470)
T ss_pred hhhhchhhhhhc--Cccccc
Confidence 123456666664 366443
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.19 E-value=5.1e-12 Score=108.18 Aligned_cols=171 Identities=25% Similarity=0.362 Sum_probs=100.3
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccc--cccccccccccc-------------
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCH--ANFTKYFSDEFW------------- 148 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~--~~~~~~~~~~~~------------- 148 (285)
..++||.+.++.. +|||||||+|.|+++++++||+++. ....|++|... ..|++--+..+|
T Consensus 155 ~mftKLrVfeqtE--yDRvifLDsDaivlknmDklFd~Pv--yef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQTE--YDRVIFLDSDAIVLKNMDKLFDYPV--YEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhhh--hceEEEeccchHHhhhhHHHhcchh--hhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 6889999988774 8999999999999999999998763 34566655211 111111111111
Q ss_pred ----------c--chhhhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhcccccc---CCCccchhhhhc-
Q 023261 149 ----------S--DREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYE---LGSLPPFLLVFG- 212 (285)
Q Consensus 149 ----------~--~~~~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~---~~dq~~lN~~~~- 212 (285)
. .+.......+.-..+||||.|+++..++....+.. +. .+ ..|+ .-.|.++|+.++
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~----~a--lP--klydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVW----FA--LP--KLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHH----Hh--hH--HhhhhhhHHHHHHHHHHHhh
Confidence 0 00011011123367899999999999986654322 11 11 2332 225677888764
Q ss_pred -C--CeeecCccccccCCCCCcccccccccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261 213 -G--DVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS 279 (285)
Q Consensus 213 -~--~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~ 279 (285)
| .|.+++++|| |+.....+ + + =.+.+|+ |||+..+..-++-....|++=+..++
T Consensus 303 ~g~FPwerld~~yN----G~wa~~nd---l-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~daf~E~ 359 (368)
T COG5597 303 EGFFPWERLDPRYN----GYWADAND---L-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQDAFTEP 359 (368)
T ss_pred hccCchhhcCcccc----cccccccc---c-c-hHHHhhc----CcCCCCcccChhhhcCcChhhhhhcH
Confidence 3 5889999999 22111100 0 0 0245565 99998765434446677875544443
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.41 E-value=0.00082 Score=56.58 Aligned_cols=141 Identities=14% Similarity=0.149 Sum_probs=74.2
Q ss_pred hhhhHHh-hHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCCCC
Q 023261 84 LNYARIY-LADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRP 162 (285)
Q Consensus 84 ~~y~Rl~-i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
.+..|.- +-++|... --|+++|+|++..+|+.++++. .+.-++...+ +.... .. ....
T Consensus 51 ~~~~K~~~~~~~L~~G-~~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d-~~~~~------------~~-----~~~~ 109 (212)
T PF03407_consen 51 LTWLKPKVLLDLLELG-YDVLFSDADVVWLRDPLPYFEN--PDADILFSSD-GWDGT------------NS-----DRNG 109 (212)
T ss_pred HHHHHHHHHHHHHHcC-CceEEecCCEEEecCcHHhhcc--CCCceEEecC-CCccc------------ch-----hhcC
Confidence 3444544 34667654 4599999999999999999922 2222344333 21100 00 0123
Q ss_pred ceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCC--------eeecCccccccCCCCCcccc
Q 023261 163 CYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGD--------VEAIDHRWNQHGLGGHNVEN 234 (285)
Q Consensus 163 ~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~--------~~~L~~~wN~~~~~~~~~~~ 234 (285)
..+|+|++.+....-- ..+.+ +|........ ...||.++|.++... +..||...-..+.++-....
T Consensus 110 ~~~n~G~~~~r~t~~~-~~~~~---~w~~~~~~~~--~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~ 183 (212)
T PF03407_consen 110 NLVNTGFYYFRPTPRT-IAFLE---DWLERMAESP--GCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSR 183 (212)
T ss_pred CccccceEEEecCHHH-HHHHH---HHHHHHHhCC--CcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecc
Confidence 4569999999776522 22333 3444333221 123999999887543 55666644422211100000
Q ss_pred cccccC-CCCceEEEecC
Q 023261 235 SCRNLH-AGPVSLMHWSG 251 (285)
Q Consensus 235 ~~~~~~-~~~~~IIHf~g 251 (285)
...... ..+|.+||.++
T Consensus 184 ~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 184 DWAWVPTKNKPYIVHANC 201 (212)
T ss_pred hhhhhccccccceEEEcC
Confidence 011111 24689999986
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=96.57 E-value=0.0049 Score=54.08 Aligned_cols=106 Identities=15% Similarity=0.203 Sum_probs=61.2
Q ss_pred CCcccchhhHHHHHHHHHhcCCCCceEEEEEe-CCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhcc
Q 023261 3 LDPEYLRGTIAAVHSVLKHTSCPENVFFHFIA-AESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALD 81 (285)
Q Consensus 3 ~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~-~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 81 (285)
.-+.++..+..+|+.|++..+ .-.+.|..-. ++++++.++.|....+-.+ ++++.. +..+.....+.
T Consensus 8 ~g~~~~~~a~~lI~~LR~~g~-~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~--vd~~~~-~~~~~~~~~~~-------- 75 (271)
T PF11051_consen 8 AGDKYLWLALRLIRVLRRLGN-TLPIEIIYPGDDDLSKEFCEKLLPDQDVWF--VDASCV-IDPDYLGKSFS-------- 75 (271)
T ss_pred ecCccHHHHHHHHHHHHHhCC-CCCEEEEeCCccccCHHHHHHHhhhhhhhe--ecceEE-eeccccccccc--------
Confidence 345788888899999988554 4567775443 6788777666654100000 111111 11111111011
Q ss_pred CchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccC
Q 023261 82 SPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIP 122 (285)
Q Consensus 82 s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~d 122 (285)
...|..=.+.-++. ..+.||+||+|.|...|++.||+.+
T Consensus 76 -~~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 76 -KKGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred -cCCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 00232222334455 4899999999999999999999873
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.07 E-value=0.01 Score=53.99 Aligned_cols=138 Identities=18% Similarity=0.315 Sum_probs=76.5
Q ss_pred hccccCeEEEEecceeeecCHHHHhccCCCCCc-eeeeecccccccccccccccccchhhhhccCCCCCceeeeeeeeee
Q 023261 95 LEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGR-TIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMD 173 (285)
Q Consensus 95 lp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~-~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~n 173 (285)
.|+ ++-+.|||+|++|+..- +.++++... .-.+.+ . |.. .++..++-.+.|+||+||.
T Consensus 195 ~Pe-aEWiWWLDsDALImNms---felPlery~~~NlVih-------g------~~~----~l~~~kdW~GLNtGsFLIR 253 (429)
T PLN03182 195 HPE-VEWIWWMDSDALFTDMT---FEIPLEKYEGYNLVIH-------G------WDE----LVYDQKSWIGLNTGSFLIR 253 (429)
T ss_pred CCC-ceEEEEecCCceeecCC---CCCCHhHcCCcCeeec-------c------chh----hheeccccCccceeeEEEE
Confidence 485 99999999999998731 222322100 000111 0 100 0122345678999999998
Q ss_pred hhhhhhhchHHHHHHHHHHhh-----------------ccccccCCCccchhhhh------cCCeeecCccccccCCCCC
Q 023261 174 LVRWREGDYTRKIEKWMRIQK-----------------ERRIYELGSLPPFLLVF------GGDVEAIDHRWNQHGLGGH 230 (285)
Q Consensus 174 l~~~r~~~~~~~~~~~~~~~~-----------------~~~~~~~~dq~~lN~~~------~~~~~~L~~~wN~~~~~~~ 230 (285)
...|-.+- .+. |..+.. ++..+..+||.+|-.++ .+.-..|...|-+++.. .
T Consensus 254 NcqWSldl-LDa---Wa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw-~ 328 (429)
T PLN03182 254 NCQWSLDL-LDA---WAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYW-V 328 (429)
T ss_pred cCHHHHHH-HHH---HHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceecccc-H
Confidence 88886432 222 333322 33345567999876655 23346777777776432 2
Q ss_pred ccccccccc---------CCCCceEEEecCCCCCCCCC
Q 023261 231 NVENSCRNL---------HAGPVSLMHWSGKGKPWVRL 259 (285)
Q Consensus 231 ~~~~~~~~~---------~~~~~~IIHf~g~~KPW~~~ 259 (285)
.+.+++++. ...-|.|.||+| .||....
T Consensus 329 ~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~ 365 (429)
T PLN03182 329 GLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGY 365 (429)
T ss_pred HHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCC
Confidence 222222111 113478999999 8998543
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=95.95 E-value=0.0052 Score=52.86 Aligned_cols=153 Identities=16% Similarity=0.200 Sum_probs=17.0
Q ss_pred hhhHHh-hHhhh---ccccCeEEEEecceeeecCHHHHhcc-----CCCCCceeeeecc---cccccccccccccccchh
Q 023261 85 NYARIY-LADIL---EPSIKRVIYLDSDVIVVDDIQKLWRI-----PLSGGRTIGAPEY---CHANFTKYFSDEFWSDRE 152 (285)
Q Consensus 85 ~y~Rl~-i~~ll---p~~~~rvlYLD~D~iv~~dl~~L~~~-----dl~~~~~~aa~~~---~~~~~~~~~~~~~~~~~~ 152 (285)
++.|+. +.+.+ |+ ++-|.|||+|++|...=-+|.+. .++. .+. .+. ...+...... ..++.
T Consensus 60 ~W~K~~~lr~~m~~~P~-~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~--~~~-r~~~~~p~~~~~~~~~---~~~~~ 132 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPE-AEWVWWLDSDALIMNPDFSLEEHILSPSRLDS--LLL-RDVPIVPPDSIIKTYS---VIDGN 132 (239)
T ss_dssp HHTHHHHHHHHHHH-TT--SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCC-CCEEEEEcCCeEEEeccccccccccccccccc--ccc-cccccccccccccccc---ccccc
Confidence 445543 23344 85 89999999999999754444322 1221 010 110 0000000000 00000
Q ss_pred hhhccCCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhc------CCeeecCccc-ccc
Q 023261 153 FSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFG------GDVEAIDHRW-NQH 225 (285)
Q Consensus 153 ~~~~~~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~------~~~~~L~~~w-N~~ 225 (285)
-.......+..++|+|++++....|-.. +.+...+......+.......||.+|-.+++ +++..+|.+| |..
T Consensus 133 ~~~li~t~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy 211 (239)
T PF05637_consen 133 DIHLIITQDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSY 211 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0011223567899999999988887753 3343322221111111112468988876653 4455566533 322
Q ss_pred CCCCCcccccccccCCCCceEEEecC
Q 023261 226 GLGGHNVENSCRNLHAGPVSLMHWSG 251 (285)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~IIHf~g 251 (285)
..+... .... +..-|+||+|
T Consensus 212 ~~~~~~-----~~~~-~GDfvvhfaG 231 (239)
T PF05637_consen 212 PEDECN-----YQYK-EGDFVVHFAG 231 (239)
T ss_dssp --------------------------
T ss_pred cccccc-----cccc-cccccccccc
Confidence 111000 0111 2347999999
No 28
>PLN03181 glycosyltransferase; Provisional
Probab=90.62 E-value=0.46 Score=43.65 Aligned_cols=108 Identities=17% Similarity=0.302 Sum_probs=57.1
Q ss_pred hccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCCCCceeeeeeeeeeh
Q 023261 95 LEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDL 174 (285)
Q Consensus 95 lp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yfNsGVml~nl 174 (285)
.|+ .+-+-|||+|++|+..=-+|=.....+..+ ++.. |. . ..+...+-..+|+||+||..
T Consensus 196 ~Pe-AEWfWWLDsDALIMNp~~sLPl~ry~~~NL--vvhg-------------~p--~--~vy~~qdw~GlN~GsFLIRN 255 (453)
T PLN03181 196 HPE-AEWIWWVDSDAVFTDMDFKLPLHRYRDHNL--VVHG-------------WP--K--LIYEKRSWTALNAGVFLIRN 255 (453)
T ss_pred CCC-ceEEEEecCCceeecCCCCCCHhhcCCccc--cccC-------------Cc--c--cccccccccccceeeeEEec
Confidence 686 899999999999997521110000111100 1110 00 0 00112345789999999987
Q ss_pred hhhhhhchHHHHHHHHHHh-----------------hccccccCCCccchhhhh------cCCeeecCccccccC
Q 023261 175 VRWREGDYTRKIEKWMRIQ-----------------KERRIYELGSLPPFLLVF------GGDVEAIDHRWNQHG 226 (285)
Q Consensus 175 ~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~dq~~lN~~~------~~~~~~L~~~wN~~~ 226 (285)
..|-.. +.+ .|..+. +++....-+||.+|-.++ .+.-..|...|-+++
T Consensus 256 cqWSl~-LLD---aWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~G 326 (453)
T PLN03181 256 CQWSLD-FMD---AWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEG 326 (453)
T ss_pred CHHHHH-HHH---HHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeee
Confidence 777643 222 133321 222334456898775443 233456777777664
No 29
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=89.58 E-value=7.9 Score=33.71 Aligned_cols=115 Identities=10% Similarity=0.123 Sum_probs=60.9
Q ss_pred ccCeEEEEecceeeecCHH-HHhccCCCCCceeeeeccc--ccccccccccccccchhhhhcc--CCCCCceeeeeeeee
Q 023261 98 SIKRVIYLDSDVIVVDDIQ-KLWRIPLSGGRTIGAPEYC--HANFTKYFSDEFWSDREFSRVF--EGKRPCYFNTGVMVM 172 (285)
Q Consensus 98 ~~~rvlYLD~D~iv~~dl~-~L~~~dl~~~~~~aa~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~yfNsGVml~ 172 (285)
++|-+.++|+|+++.+.+. |.+ ++ .+|+.... ..+ ..-+..+ ++|.- ..+ .+.+..|+-+||.==
T Consensus 123 e~DYlF~~dvd~~F~~~ig~E~L----g~--lva~lHp~~y~~~-~~~fpYE--Rrp~S-~AyIp~~eGdfYy~Ga~~GG 192 (271)
T cd02515 123 EVDYLFCMDVDMVFQGPFGVETL----GD--SVAQLHPWWYGKP-RKQFPYE--RRPSS-AAYIPEGEGDFYYHGAVFGG 192 (271)
T ss_pred cCCEEEEeeCCceEeecCCHHHh----hh--hheecChhhhcCC-CCCCCCc--CCCCc-cccccCCCCCeEEeeeecCc
Confidence 4999999999999999985 333 22 46664321 100 0011111 11110 111 234577777776533
Q ss_pred ehhhhhhhchHHHHHHHHHH-hhccc--cccCCCccchhhhhc-CC-eeecCccccccC
Q 023261 173 DLVRWREGDYTRKIEKWMRI-QKERR--IYELGSLPPFLLVFG-GD-VEAIDHRWNQHG 226 (285)
Q Consensus 173 nl~~~r~~~~~~~~~~~~~~-~~~~~--~~~~~dq~~lN~~~~-~~-~~~L~~~wN~~~ 226 (285)
..+... ++.+.|..-+.. ..+.. .|+ |..-||..|- .+ .+.|++.|+...
T Consensus 193 ~~~~vl--~l~~~c~~~i~~D~~n~I~A~wH--DESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 193 SVEEVY--RLTRACHEGILADKANGIEARWH--DESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred cHHHHH--HHHHHHHHHHHHHHhCCceEEee--cHhHhHHHHhhCCCCeecChhhcCCc
Confidence 333332 233444333322 12222 343 6778998764 33 899999999863
No 30
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=88.55 E-value=0.54 Score=43.16 Aligned_cols=164 Identities=16% Similarity=0.143 Sum_probs=86.9
Q ss_pred hhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeec-ccc---ccccccccc-ccccchh-----hhh
Q 023261 86 YARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPE-YCH---ANFTKYFSD-EFWSDRE-----FSR 155 (285)
Q Consensus 86 y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~-~~~---~~~~~~~~~-~~~~~~~-----~~~ 155 (285)
+..+.+.. +.+ .++++|+|.|+-+..++...++...+-. .+... .+. .....+-.. -.+.++. ...
T Consensus 114 ~~~~~~~~-~~~-~~a~i~~~~~i~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~ 189 (369)
T KOG1950|consen 114 DDKIKIWR-LIE-DGAAIYLVDDIQRFRNDDANFDVPNELN--YAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPD 189 (369)
T ss_pred ccceeecc-eec-cCceEEEecchhhccCccccccccchhc--ccccceeeecccccceEEeccchhcCChhhhhhhchh
Confidence 55555555 443 6999999999999999999999865421 11211 010 000000000 0011110 001
Q ss_pred ccC-CCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccC-CCCCccc
Q 023261 156 VFE-GKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHG-LGGHNVE 233 (285)
Q Consensus 156 ~~~-~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~-~~~~~~~ 233 (285)
.+. +.....||+|.|++-..-..-.. .+........+.+++|+++|.+|.....+.|+.+|... .......
T Consensus 190 ~~~~~~l~~~~n~~~~v~~ps~~~~~~-------~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~ 262 (369)
T KOG1950|consen 190 LFATNILPLIFNSGLLVFEPSLCNYKD-------LMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPK 262 (369)
T ss_pred hccCCCccceeccCccccCCCccchhh-------HHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCcc
Confidence 111 12344599999999666543222 22323333456778999999999766658888888752 1111110
Q ss_pred -ccccccCCCCceEEEecCCCCCCCCCC
Q 023261 234 -NSCRNLHAGPVSLMHWSGKGKPWVRLD 260 (285)
Q Consensus 234 -~~~~~~~~~~~~IIHf~g~~KPW~~~~ 260 (285)
.............+||.|..|||....
T Consensus 263 ~~~l~~~~~~~~~~~~y~~~~~p~~~~~ 290 (369)
T KOG1950|consen 263 KNDLSRASSVLRYALHYLGANKPELCYR 290 (369)
T ss_pred ccchhhcccccchhhhccccCCCCcccc
Confidence 000011111234669999778886543
No 31
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=88.21 E-value=6.7 Score=30.11 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+.-++.|+++.+. ..+.++|+.++-+++..+.++++.. ....++++..+... + ....
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~~~~~~~~~~~---~~~~i~~i~~~~n~--g-------------~~~~ 69 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVVDDGSTDETEEILEEYAE---SDPNIRYIRNPENL--G-------------FSAA 69 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEEECS-SSSHHHHHHHHHC---CSTTEEEEEHCCCS--H-------------HHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEeccccccccccccccccc---cccccccccccccc--c-------------cccc
Confidence 4567778899998843 4588877777776776667776653 12344444333110 0 1122
Q ss_pred HHhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
+-..-+... -+-++++|+|.++..+ |..|.+.
T Consensus 70 ~n~~~~~a~--~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 70 RNRGIKHAK--GEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp HHHHHHH----SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred ccccccccc--eeEEEEeCCCceEcHHHHHHHHHH
Confidence 222223343 3799999999999988 7777766
No 32
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=84.83 E-value=1.1 Score=39.73 Aligned_cols=49 Identities=12% Similarity=0.140 Sum_probs=38.6
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCC-CCCceeeeec
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPL-SGGRTIGAPE 133 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl-~~~~~~aa~~ 133 (285)
.-+.|++...+||+ ++--||||+-+-+.+|+..|.+.-+ .++.-+|+..
T Consensus 139 ~r~~K~lpHrlfp~-y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~ 188 (305)
T PF04765_consen 139 GRIPKLLPHRLFPN-YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISK 188 (305)
T ss_pred CcccceeccccCCC-CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeC
Confidence 35678888999996 9999999999999999988877644 2334566654
No 33
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=82.42 E-value=0.64 Score=42.21 Aligned_cols=33 Identities=30% Similarity=0.516 Sum_probs=23.6
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhcc
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRI 121 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~ 121 (285)
+...||.+---... ||||+|+||++++..|-+.
T Consensus 228 Sdl~RLA~LyKYGG-----vYLDTDvIvLksl~~l~N~ 260 (409)
T KOG1928|consen 228 SDLSRLALLYKYGG-----VYLDTDVIVLKSLSNLRNV 260 (409)
T ss_pred HHHHHHHHHHHhCC-----EEeeccEEEeccccccccc
Confidence 34567765333332 8999999999999987643
No 34
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=81.10 E-value=40 Score=30.46 Aligned_cols=188 Identities=11% Similarity=0.115 Sum_probs=83.9
Q ss_pred cccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCch
Q 023261 5 PEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPL 84 (285)
Q Consensus 5 ~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 84 (285)
..|+..+.-.+.|.-++--...++.+||+||..+.= -.+ +..|.-++.+..+... ..+ .-.
T Consensus 109 GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~v--P~i-----~l~~~r~~~V~~v~~~-----~~W-------qd~ 169 (337)
T PF03414_consen 109 GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKV--PRI-----ELGPGRRLKVFEVQEE-----KRW-------QDI 169 (337)
T ss_dssp CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS-------------TTEEEEEEE-SGG-----SSH-------HHH
T ss_pred ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhC--Ccc-----ccCCCceeEEEEeccc-----CCC-------ccc
Confidence 456666666677766665445667777777754321 011 0122233444444211 011 012
Q ss_pred hhhHHh------hHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecc--cccccccccccccccchhhhhc
Q 023261 85 NYARIY------LADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEY--CHANFTKYFSDEFWSDREFSRV 156 (285)
Q Consensus 85 ~y~Rl~------i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~--~~~~~~~~~~~~~~~~~~~~~~ 156 (285)
++.|+- ...++. ++|-+.++|+|+++.+++.. ..|+ ..+|+... ...+ ..-+..+. .|.- ..
T Consensus 170 sm~Rm~~i~~~i~~~~~~-EvDYLFc~dvd~~F~~~vGv---E~Lg--~lva~LHp~~y~~~-~~~FpYER--rp~S-~A 239 (337)
T PF03414_consen 170 SMMRMEMISEHIEQHIQH-EVDYLFCMDVDMVFQDHVGV---EILG--DLVATLHPWFYFKP-RESFPYER--RPKS-QA 239 (337)
T ss_dssp HHHHHHHHHHHHHHCHHH-H-SEEEEEESSEEE-S-B-G---GG-S--SEEEEESTTTTTST-GGGS--B---STTS-TT
T ss_pred hhHHHHHHHHHHHHHHhh-cCCEEEEEecceEEecccCH---HHHH--HHHHHhCHHHHCCC-hhhCcccc--Cccc-cc
Confidence 333332 233455 49999999999999998864 1233 26776542 1110 11111111 1110 11
Q ss_pred c--CCCCCceeeeeeeeeehhhhhhhchHHHHHHHHHHh-hcc--ccccCCCccchhhhhc--CCeeecCcccccc
Q 023261 157 F--EGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQ-KER--RIYELGSLPPFLLVFG--GDVEAIDHRWNQH 225 (285)
Q Consensus 157 ~--~~~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~-~~~--~~~~~~dq~~lN~~~~--~~~~~L~~~wN~~ 225 (285)
+ .+.+..|+-+|+.==...+.. ++++.|..-+..- .+. ..| .|..-||..|- ...+.|++.|+..
T Consensus 240 yIp~~eGDfYY~ga~fGGt~~~vl--~Lt~~c~~~i~~D~~n~I~A~W--hDESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 240 YIPYGEGDFYYHGAFFGGTVEEVL--RLTEACHQGIMQDKANGIEALW--HDESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp B--TT--S--EECCEEEECHHHHH--HHHHHHHHHHHHHHHTT---TT--CHHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred cccCCCCCeEEeceecCCcHHHHH--HHHHHHHHHHHhhhhcCceEec--cchhhhHHHHhhCCCceecCHHHccC
Confidence 1 134567777776654444432 2444444333221 121 233 36677998763 4488999999875
No 35
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=80.32 E-value=10 Score=34.36 Aligned_cols=107 Identities=8% Similarity=-0.053 Sum_probs=56.6
Q ss_pred ccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchh
Q 023261 6 EYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLN 85 (285)
Q Consensus 6 ~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~ 85 (285)
|...++.-+|.||++..+......++|..||-.++..+.++... ..+++ +.+.+... .+.-..+..+.....+.
T Consensus 10 NRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~----~~i~~-i~~~~~~~-~~~~~~~~~~~y~~ia~ 83 (334)
T cd02514 10 NRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFG----DGVTH-IQHPPISI-KNVNPPHKFQGYYRIAR 83 (334)
T ss_pred CCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhc----cccEE-EEcccccc-cccCcccccchhhHHHH
Confidence 44567888999999985334568888888886655444443321 01221 11111110 00000000001111233
Q ss_pred hhHHhhHhhhcc-ccCeEEEEecceeeecCHHHH
Q 023261 86 YARIYLADILEP-SIKRVIYLDSDVIVVDDIQKL 118 (285)
Q Consensus 86 y~Rl~i~~llp~-~~~rvlYLD~D~iv~~dl~~L 118 (285)
.+|.-+-.++.. .+++||.||.|+++.-|.-+.
T Consensus 84 hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~y 117 (334)
T cd02514 84 HYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSY 117 (334)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHH
Confidence 344455555542 389999999999999985443
No 36
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=79.56 E-value=23 Score=29.75 Aligned_cols=91 Identities=13% Similarity=0.100 Sum_probs=50.7
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+..++.|+......+..+.+.|+.|+-+++..+.++++... .+.++..+. . .+ ....+
T Consensus 42 ~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-----~v~~i~~~~-~-~g-------------~~~a~ 101 (251)
T cd06439 42 AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK-----GVKLLRFPE-R-RG-------------KAAAL 101 (251)
T ss_pred HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC-----cEEEEEcCC-C-CC-------------hHHHH
Confidence 4567788999886543334777677777666666555554321 233332211 0 00 01112
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
-..-+... -|-++++|+|+++..+ +..+++.
T Consensus 102 n~gi~~a~--~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 102 NRALALAT--GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred HHHHHHcC--CCEEEEEccccCcCHHHHHHHHHH
Confidence 11112222 4899999999999865 5666655
No 37
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=79.56 E-value=24 Score=26.88 Aligned_cols=89 Identities=16% Similarity=0.057 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|++..+. ..+.+.|+.++-+++..+.+++.... ++. .+.+. ..... .+ . ...|
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t~~~~~~~~~~-~~~-~~~~~-~~~~~-~g-~------------~~~~ 70 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDDTLEILEELAAL-YIR-RVLVV-RDKEN-GG-K------------AGAL 70 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccchHHHHHHHhcc-ccc-eEEEE-Eeccc-CC-c------------hHHH
Confidence 567788999998764 34777777777776666666555332 111 11111 11111 00 0 0111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHH
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKL 118 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L 118 (285)
-..-+... .+-++++|+|.++..+ |..+
T Consensus 71 n~~~~~~~--~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 71 NAGLRHAK--GDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred HHHHHhcC--CCEEEEECCCCCcChHHHHHH
Confidence 11111123 5899999999999876 5555
No 38
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=78.81 E-value=8.6 Score=35.99 Aligned_cols=111 Identities=10% Similarity=0.016 Sum_probs=54.8
Q ss_pred ccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchh
Q 023261 6 EYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLN 85 (285)
Q Consensus 6 ~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~ 85 (285)
|-..++.-+|.||+++.+..+.+.+.|..|+-.++..+.+++.. ..+.. +...+...+..........+....+.
T Consensus 103 NRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~----~~v~~-i~~~~~~~i~~~~~~~~~~~y~~IA~ 177 (434)
T PF03071_consen 103 NRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYG----DQVTY-IQHPDFSPITIPPKEKKFKGYYKIAR 177 (434)
T ss_dssp S-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGG----GGSEE-EE-S--S-----TT-GGGHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhh----hhhee-eecCCcCCceeCcccccccchHHHHH
Confidence 44556778999999987655667776777776655443433321 11221 12222222211111100011222355
Q ss_pred hhHHhhHhhhcc-ccCeEEEEecceeeecCHHHHhcc
Q 023261 86 YARIYLADILEP-SIKRVIYLDSDVIVVDDIQKLWRI 121 (285)
Q Consensus 86 y~Rl~i~~llp~-~~~rvlYLD~D~iv~~dl~~L~~~ 121 (285)
.+|..+..++.. .+++||.+.-|+.|--|.-+-|+.
T Consensus 178 HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 178 HYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 667777777753 389999999999999998766544
No 39
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=75.93 E-value=24 Score=28.62 Aligned_cols=96 Identities=14% Similarity=0.164 Sum_probs=53.3
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+.-+|.||+...- ..+.+.|+.++-+++..+.++++.. .++..+++++..+.. . +. ... ..+.
T Consensus 13 ~~~l~~~L~sl~~q~~--~~~eiivVdd~s~d~t~~~~~~~~~-~~~~~~~~~~~~~~~-~-g~-~~~-------~~~~- 78 (196)
T cd02520 13 DPNLYENLESFFQQDY--PKYEILFCVQDEDDPAIPVVRKLIA-KYPNVDARLLIGGEK-V-GI-NPK-------VNNL- 78 (196)
T ss_pred CccHHHHHHHHHhccC--CCeEEEEEeCCCcchHHHHHHHHHH-HCCCCcEEEEecCCc-C-CC-CHh-------HHHH-
Confidence 3456778999988653 2388877777777777777776654 355555544433211 0 00 000 0000
Q ss_pred HHhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
...+. .. ..+=++++|+|+++..+ |..+..
T Consensus 79 n~g~~--~a-~~d~i~~~D~D~~~~~~~l~~l~~ 109 (196)
T cd02520 79 IKGYE--EA-RYDILVISDSDISVPPDYLRRMVA 109 (196)
T ss_pred HHHHH--hC-CCCEEEEECCCceEChhHHHHHHH
Confidence 01111 12 26899999999988543 344443
No 40
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=75.37 E-value=25 Score=28.85 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=49.3
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+.-+|.||+..+..+..+.+.|+.++-++...+.++ .. ...+...+.+...+. .. ..+ ...-.
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~-~~~~~~~v~~~~~~~---~~--~~g-------~~~a~ 74 (229)
T cd04192 9 AENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FA-AAKPNFQLKILNNSR---VS--ISG-------KKNAL 74 (229)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HH-HhCCCcceEEeeccC---cc--cch-------hHHHH
Confidence 456778899998887533347776666665555555444 21 123333443332221 00 000 00001
Q ss_pred HHhhHhhhccccCeEEEEecceeeecCH-HHHhc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDDI-QKLWR 120 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~dl-~~L~~ 120 (285)
..-+. . . ..+-++++|+|.++..+. ..+..
T Consensus 75 n~g~~-~-~-~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 75 TTAIK-A-A-KGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHH-H-h-cCCEEEEECCCcccCHHHHHHHHH
Confidence 11111 1 2 269999999999998654 44443
No 41
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.29 E-value=20 Score=34.49 Aligned_cols=92 Identities=17% Similarity=0.231 Sum_probs=57.2
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcc----cHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCch
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPA----NTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPL 84 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~----~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 84 (285)
.++.++--|+.+... .+.++|+|+.|.-+++ +++...+++++.....+| +|..-.+.+.. .+ -+..
T Consensus 162 AgLrA~~eSla~Tg~-~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~i-fYRrRr~n~~R-Ka-------GNIa 231 (736)
T COG2943 162 AGLRATYESLAATGH-AEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNI-FYRRRRRNVKR-KA-------GNIA 231 (736)
T ss_pred HHHHHHHHHHHhhCC-cccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCce-eeehHhhhhcc-cc-------cCHH
Confidence 356667788888765 4789999998865553 344445555543322333 44443222221 11 1346
Q ss_pred hhhHHhhHhhhccccCeEEEEecceeeecCH
Q 023261 85 NYARIYLADILEPSIKRVIYLDSDVIVVDDI 115 (285)
Q Consensus 85 ~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl 115 (285)
.|+|=+ ...|+..|.||+|-+..+|-
T Consensus 232 DfcrRw-----G~~Y~~MlVLDADSvMtgd~ 257 (736)
T COG2943 232 DFCRRW-----GSAYSYMLVLDADSVMTGDC 257 (736)
T ss_pred HHHHHh-----CcccceEEEeecccccCchH
Confidence 777754 33499999999999999974
No 42
>PRK15383 type III secretion system protein; Provisional
Probab=73.19 E-value=2.1 Score=36.53 Aligned_cols=20 Identities=35% Similarity=0.760 Sum_probs=18.4
Q ss_pred CeEEEEecceeeecCHHHHh
Q 023261 100 KRVIYLDSDVIVVDDIQKLW 119 (285)
Q Consensus 100 ~rvlYLD~D~iv~~dl~~L~ 119 (285)
+-+||||+|||+.+-|--|+
T Consensus 220 ~GCIYLD~DMilT~KLG~ly 239 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLY 239 (335)
T ss_pred CceEEeecceeeecccccEE
Confidence 66999999999999998888
No 43
>PRK15384 type III secretion system protein; Provisional
Probab=73.18 E-value=2 Score=36.66 Aligned_cols=20 Identities=30% Similarity=0.748 Sum_probs=18.4
Q ss_pred CeEEEEecceeeecCHHHHh
Q 023261 100 KRVIYLDSDVIVVDDIQKLW 119 (285)
Q Consensus 100 ~rvlYLD~D~iv~~dl~~L~ 119 (285)
+-+||||+|||+.+-|--|+
T Consensus 217 ~GCIYLDaDMilT~KLG~ly 236 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIY 236 (336)
T ss_pred CceEEeeccceeecccccEE
Confidence 66999999999999998888
No 44
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=73.13 E-value=2.1 Score=36.52 Aligned_cols=20 Identities=40% Similarity=0.810 Sum_probs=18.5
Q ss_pred CeEEEEecceeeecCHHHHh
Q 023261 100 KRVIYLDSDVIVVDDIQKLW 119 (285)
Q Consensus 100 ~rvlYLD~D~iv~~dl~~L~ 119 (285)
+-+||||+|||+.+-|--|+
T Consensus 212 ~GCIYLD~DMilT~KLG~ly 231 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLY 231 (326)
T ss_pred CceEEeecceeeecccccEE
Confidence 67999999999999998888
No 45
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=72.52 E-value=2.2 Score=31.31 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=25.7
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCH-HHHh
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDI-QKLW 119 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl-~~L~ 119 (285)
+-++|+.+--.... ||+|.|+++.+++ +++.
T Consensus 66 sD~~R~~~L~~~GG-----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYGG-----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcCc-----EEEeCccccCcchhhhhh
Confidence 67889998766665 8999999999999 6665
No 46
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=69.75 E-value=38 Score=24.99 Aligned_cols=89 Identities=16% Similarity=0.065 Sum_probs=49.6
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+..++.|+.+... ....++|+.++.+++..+.+++.... . ..+.... .... .. ....
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~~~----~g----------~~~~ 68 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGSTDGTLEILEEYAKK-D--PRVIRVI-NEEN----QG----------LAAA 68 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCCccHHHHHHHHHhc-C--CCeEEEE-ecCC----CC----------hHHH
Confidence 4567788999988764 34778888888777766666655432 0 1111111 1000 00 0111
Q ss_pred HHhhHhhhccccCeEEEEecceeeecCHHHH
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDDIQKL 118 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L 118 (285)
+-..-... ..+.++++|+|.++..+.-+.
T Consensus 69 ~~~~~~~~--~~d~v~~~d~D~~~~~~~~~~ 97 (156)
T cd00761 69 RNAGLKAA--RGEYILFLDADDLLLPDWLER 97 (156)
T ss_pred HHHHHHHh--cCCEEEEECCCCccCccHHHH
Confidence 11111112 269999999999998775443
No 47
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=69.61 E-value=32 Score=30.14 Aligned_cols=94 Identities=21% Similarity=0.189 Sum_probs=49.3
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHH-HhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTV-RSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
..+.-++.||+..+.....+.+.|+.++-++...+.+.+.. ....+.+ ++...+.. .+. + -+
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v--~vi~~~~n--~G~-~------------~a 74 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKV--KVLRLKKR--EGL-I------------RA 74 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcE--EEEEcCCC--CCH-H------------HH
Confidence 67778899999877532234665666665555555554422 2223333 33322210 010 1 11
Q ss_pred HHhhHhhhccccCeEEEEecceeeec-CHHHHhcc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVD-DIQKLWRI 121 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~-dl~~L~~~ 121 (285)
|=..-..- .-+-|++||+|+++.. -|..|.+.
T Consensus 75 ~N~g~~~A--~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 75 RIAGARAA--TGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHHHHHHc--cCCEEEEEeCCcccCccHHHHHHHH
Confidence 11111111 2589999999999975 44666554
No 48
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=68.91 E-value=12 Score=31.81 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=18.6
Q ss_pred ccCeEEEEecceeeecC-HHHHhc
Q 023261 98 SIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 98 ~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
..|-++.+|+|+++..| |..+..
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~ 96 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYK 96 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHH
Confidence 37999999999999887 565654
No 49
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=63.88 E-value=5.9 Score=33.19 Aligned_cols=23 Identities=39% Similarity=0.618 Sum_probs=19.5
Q ss_pred hHhhhccccCeEEEEecceeeecC
Q 023261 91 LADILEPSIKRVIYLDSDVIVVDD 114 (285)
Q Consensus 91 i~~llp~~~~rvlYLD~D~iv~~d 114 (285)
+..+||+ ++-||+||+||-|..+
T Consensus 35 va~~L~~-~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 35 VAKILPE-YDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHhcc-CCEEEEEcCCceeecC
Confidence 4567896 9999999999999865
No 50
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=63.82 E-value=11 Score=31.23 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARI 89 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 89 (285)
.+.-++.|+++..- ..+.++|+.++-+++..+.++++.. .+|...+++...... .. .... ..-...
T Consensus 15 ~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~-~~~~~~v~vi~~~~~-~g-~~~k---------~~a~n~ 80 (228)
T PF13641_consen 15 VLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAA-RYPRVRVRVIRRPRN-PG-PGGK---------ARALNE 80 (228)
T ss_dssp HHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHH-TTGG-GEEEEE-----HH-HHHH---------HHHHHH
T ss_pred HHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHH-HcCCCceEEeecCCC-CC-cchH---------HHHHHH
Confidence 45568888886543 3488888887766666666766654 355555554432210 00 0000 000111
Q ss_pred hhHhhhccccCeEEEEecceeeecC-HHHHh
Q 023261 90 YLADILEPSIKRVIYLDSDVIVVDD-IQKLW 119 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~ 119 (285)
.+.. .. .+-++++|+|+++..+ |.++.
T Consensus 81 ~~~~-~~--~d~i~~lD~D~~~~p~~l~~~~ 108 (228)
T PF13641_consen 81 ALAA-AR--GDYILFLDDDTVLDPDWLERLL 108 (228)
T ss_dssp HHHH------SEEEEE-SSEEE-CHHHHHHH
T ss_pred HHHh-cC--CCEEEEECCCcEECHHHHHHHH
Confidence 1111 22 6999999999999654 34443
No 51
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=63.66 E-value=54 Score=30.75 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+...+-++..+.+.|+.|+.+++..+.+++.. +.+|.+.+. ..+.+ .+ .+...+
T Consensus 62 ~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~-~~~~~v~v~--~~~~~--~G-ka~AlN----------- 124 (439)
T TIGR03111 62 DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQ-NEFPGLSLR--YMNSD--QG-KAKALN----------- 124 (439)
T ss_pred HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHH-HhCCCeEEE--EeCCC--CC-HHHHHH-----------
Confidence 44566788887765433456776666666666655555543 335544332 22211 11 111010
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHh
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLW 119 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~ 119 (285)
..+ +... -+-|+.+|+|.++..| +.++.
T Consensus 125 ~gl-~~s~--g~~v~~~DaD~~~~~d~L~~l~ 153 (439)
T TIGR03111 125 AAI-YNSI--GKYIIHIDSDGKLHKDAIKNMV 153 (439)
T ss_pred HHH-HHcc--CCEEEEECCCCCcChHHHHHHH
Confidence 111 1122 3669999999999765 34444
No 52
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=62.63 E-value=30 Score=30.40 Aligned_cols=32 Identities=13% Similarity=0.163 Sum_probs=24.9
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhc
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~ 120 (285)
+-+.|+.+-.--.. +|+|+++++.++|.+.+.
T Consensus 112 SDilR~~LL~~yGG-----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 112 SDILRLALLYKYGG-----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred HHHHHHHHHHHcCc-----EEeCCceEECCchhHHHh
Confidence 46779887554543 899999999999987653
No 53
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=62.60 E-value=44 Score=33.51 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHH----HHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchh
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTN----DLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLN 85 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~----~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~ 85 (285)
.+..++.|+...+. +.+++|+|+.|+-+++... .+.++.++.-+..++.+..-... .+.... +...
T Consensus 143 ~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n--~~~KaG-------Nl~~ 212 (691)
T PRK05454 143 GLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRRN--VGRKAG-------NIAD 212 (691)
T ss_pred HHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCcC--CCccHH-------HHHH
Confidence 45677888887654 3569998888876654321 23344433212233332211111 111111 1123
Q ss_pred hhHHhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 86 YARIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 86 y~Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
+.|.+ -. .+|-++.+|+|+++.+| +..+-.
T Consensus 213 ~~~~~----~~-~~eyivvLDADs~m~~d~L~~lv~ 243 (691)
T PRK05454 213 FCRRW----GG-AYDYMVVLDADSLMSGDTLVRLVR 243 (691)
T ss_pred HHHhc----CC-CcCEEEEEcCCCCCCHHHHHHHHH
Confidence 33322 13 48999999999999998 455554
No 54
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=62.06 E-value=62 Score=25.91 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=46.8
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
+..+..++.||+..+. ..+.+.|+.++-++...+.+.+......+. +.+...... .+ .+.+
T Consensus 14 ~~~l~~~l~sl~~q~~--~~~eiivvd~gs~d~~~~~~~~~~~~~~~~--~~~~~~~~~--~g-------------~~~a 74 (202)
T cd04184 14 EKYLREAIESVRAQTY--PNWELCIADDASTDPEVKRVLKKYAAQDPR--IKVVFREEN--GG-------------ISAA 74 (202)
T ss_pred HHHHHHHHHHHHhCcC--CCeEEEEEeCCCCChHHHHHHHHHHhcCCC--EEEEEcccC--CC-------------HHHH
Confidence 3667889999998764 236776665665544444433322222232 222221110 00 1111
Q ss_pred HHhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
+-..-.... .+=++++|+|.++..+ +..+..
T Consensus 75 ~n~g~~~a~--~d~i~~ld~D~~~~~~~l~~~~~ 106 (202)
T cd04184 75 TNSALELAT--GEFVALLDHDDELAPHALYEVVK 106 (202)
T ss_pred HHHHHHhhc--CCEEEEECCCCcCChHHHHHHHH
Confidence 211112222 5899999999999765 444443
No 55
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=60.79 E-value=90 Score=25.55 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=53.0
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+.-++.||+..+-. ..+.+.|+.++-++...+.++++..+ .+...+++...... ... .. -.+++
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~-~~~~~~~~~~~~~~-~~~--~~--------G~~~a 75 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWRKK-LEDSGVIVLVGSHN-SPS--PK--------GVGYA 75 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHHHh-CcccCeEEEEeccc-CCC--Cc--------cHHHH
Confidence 45677889999886542 34787777777666655566665432 33223333222110 000 00 02333
Q ss_pred HHhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
|=...+.-. -+-+++||+|.++..+ +..+...
T Consensus 76 ~N~g~~~a~--gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 76 KNQAIAQSS--GRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred HHHHHHhcC--CCEEEEECCCccCChhHHHHHHHH
Confidence 333223232 5899999999887654 5555433
No 56
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=60.07 E-value=59 Score=26.97 Aligned_cols=91 Identities=9% Similarity=-0.021 Sum_probs=45.7
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhh-CCCceEEEEecchhhhcccccchhhhhccCchhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSA-FPYLSFQVYLFREKFVTGLISSSIRRALDSPLNY 86 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y 86 (285)
-..+.-+|.||+.-.-....+.+.| .|+-++...+.+++...+. ....++...... +. .+.... +
T Consensus 13 ~~~l~~~L~sl~~q~~~~~~~eIiV-vD~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~-~~-~G~k~~----------a- 78 (232)
T cd06437 13 KYVVERLIEAACALDYPKDRLEIQV-LDDSTDETVRLAREIVEEYAAQGVNIKHVRRA-DR-TGYKAG----------A- 78 (232)
T ss_pred HHHHHHHHHHHHhcCCCccceEEEE-EECCCCcHHHHHHHHHHHHhhcCCceEEEECC-CC-CCCchH----------H-
Confidence 3456788999987543333456544 5665555566666655331 112233222111 10 010000 0
Q ss_pred hHHhhHhhhccccCeEEEEecceeeecCH
Q 023261 87 ARIYLADILEPSIKRVIYLDSDVIVVDDI 115 (285)
Q Consensus 87 ~Rl~i~~llp~~~~rvlYLD~D~iv~~dl 115 (285)
....+. .. ..+-++++|+|+++..+-
T Consensus 79 ~n~g~~--~a-~~~~i~~~DaD~~~~~~~ 104 (232)
T cd06437 79 LAEGMK--VA-KGEYVAIFDADFVPPPDF 104 (232)
T ss_pred HHHHHH--hC-CCCEEEEEcCCCCCChHH
Confidence 011111 12 269999999999997654
No 57
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=58.42 E-value=95 Score=24.91 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=52.3
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|++..+.. .+.++|+.++-+++..+.++++..+ +| ..+.++..+ .. .+ .. .+.-+
T Consensus 11 ~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~~-~~-~~~~~~~~~-~~-~G-~~----------~~~n~ 73 (214)
T cd04196 11 KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYIDK-DP-FIIILIRNG-KN-LG-VA----------RNFES 73 (214)
T ss_pred HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHhc-CC-ceEEEEeCC-CC-cc-HH----------HHHHH
Confidence 4567889999987642 5888777777766666666665432 33 122222111 10 00 00 01101
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
- + . .. ..+-|++||+|.++..+ |..+.+.
T Consensus 74 g-~-~-~~-~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 74 L-L-Q-AA-DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred H-H-H-hC-CCCEEEEECCCcccChhHHHHHHHH
Confidence 0 1 1 22 36899999999888765 7777775
No 58
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=57.04 E-value=1.1e+02 Score=24.99 Aligned_cols=92 Identities=12% Similarity=0.120 Sum_probs=48.8
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+..++.||..... ...+.+.|+.|+-+++..+.++++.++ .+.+ .++..... .+ .+.++
T Consensus 10 ~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~~~~-~~~i--~~~~~~~n--~G-------------~~~a~ 70 (224)
T cd06442 10 ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVRELAKE-YPRV--RLIVRPGK--RG-------------LGSAY 70 (224)
T ss_pred hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHHHHh-CCce--EEEecCCC--CC-------------hHHHH
Confidence 446778888887654 234777777766666666666665432 3333 22221110 00 01111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
-..-+... -+-++++|+|.++..+ |..+.+.
T Consensus 71 n~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 102 (224)
T cd06442 71 IEGFKAAR--GDVIVVMDADLSHPPEYIPELLEA 102 (224)
T ss_pred HHHHHHcC--CCEEEEEECCCCCCHHHHHHHHHH
Confidence 11111122 3789999999888754 5556553
No 59
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=56.78 E-value=23 Score=27.79 Aligned_cols=59 Identities=12% Similarity=0.119 Sum_probs=41.0
Q ss_pred CCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhc
Q 023261 2 TLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVT 69 (285)
Q Consensus 2 ~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~ 69 (285)
++++++...+.-++.||.+..+. ..+ .|..-|++++.++.|+.. +++++ +..+|-....
T Consensus 67 a~S~~h~~~~~~~i~si~~~~P~-~k~--ilY~LgL~~~~i~~L~~~----~~n~e--vr~Fn~s~YP 125 (142)
T PF07801_consen 67 ATSDNHFNESMKSISSIRKFYPN-HKI--ILYDLGLSEEQIKKLKKN----FCNVE--VRKFNFSKYP 125 (142)
T ss_pred EecchHHHHHHHHHHHHHHHCCC-CcE--EEEeCCCCHHHHHHHHhc----CCceE--EEECCCccCc
Confidence 46788888999999999999874 333 455779999987777642 34454 4566644433
No 60
>PRK11204 N-glycosyltransferase; Provisional
Probab=55.41 E-value=1e+02 Score=28.41 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=50.1
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+++.+-+ .+.+.|+.|+-+++..+.++++.. .+|++ ++...... .+ ..... .
T Consensus 67 ~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~~~~-~~~~v--~~i~~~~n--~G-ka~al-----------n 127 (420)
T PRK11204 67 ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDRLAA-QIPRL--RVIHLAEN--QG-KANAL-----------N 127 (420)
T ss_pred HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHHHHH-hCCcE--EEEEcCCC--CC-HHHHH-----------H
Confidence 4466778888876532 477877777777776666666643 34433 33221111 01 01111 1
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
.-+. . . ..|-++.+|+|.++..| +..+.+
T Consensus 128 ~g~~-~-a-~~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 128 TGAA-A-A-RSEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred HHHH-H-c-CCCEEEEECCCCCCChhHHHHHHH
Confidence 1111 1 2 37999999999999876 455543
No 61
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=55.14 E-value=63 Score=29.50 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARI 89 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 89 (285)
.+.-++.|++...-+ .+.+.++.|+-++...+.++++. ..+|+.++++. .+... .+ . +.+ ..+....
T Consensus 55 ~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~~-~~~p~~~i~~v-~~~~~-~G---~--~~K---~~~l~~~ 121 (373)
T TIGR03472 55 ELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRLR-ADFPDADIDLV-IDARR-HG---P--NRK---VSNLINM 121 (373)
T ss_pred hHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHHH-HhCCCCceEEE-ECCCC-CC---C--ChH---HHHHHHH
Confidence 455677788776532 26665555554444455555553 34666555543 22111 00 0 000 0111121
Q ss_pred hhHhhhccccCeEEEEecceeeecCH
Q 023261 90 YLADILEPSIKRVIYLDSDVIVVDDI 115 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~~dl 115 (285)
+.. . ..|-++++|+|+++..|-
T Consensus 122 -~~~--a-~ge~i~~~DaD~~~~p~~ 143 (373)
T TIGR03472 122 -LPH--A-RHDILVIADSDISVGPDY 143 (373)
T ss_pred -HHh--c-cCCEEEEECCCCCcChhH
Confidence 221 2 379999999999997664
No 62
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=54.17 E-value=1.1e+02 Score=25.07 Aligned_cols=39 Identities=8% Similarity=-0.040 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQT 48 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~ 48 (285)
.+.-++.|++...-....+.+.|+.++-+++..+.++++
T Consensus 16 ~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~ 54 (234)
T cd06421 16 IVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAEL 54 (234)
T ss_pred HHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHh
Confidence 456788999876543333677666666555545455544
No 63
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=51.80 E-value=16 Score=33.28 Aligned_cols=145 Identities=12% Similarity=0.052 Sum_probs=72.4
Q ss_pred hccccCeEEEEecceeeecCHHHHhccCCCCC--ceeeeeccccccccc----ccccccccchhhhh--ccCCCCCceee
Q 023261 95 LEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGG--RTIGAPEYCHANFTK----YFSDEFWSDREFSR--VFEGKRPCYFN 166 (285)
Q Consensus 95 lp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~--~~~aa~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~yfN 166 (285)
.|+ .+-+=+||.|.+|+..--+|=+.-++.. ...+.+++. ..+.. ..+...|++..+.. .+++.+...+|
T Consensus 173 yP~-AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~-~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~n 250 (364)
T KOG4748|consen 173 YPD-AEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQ-KSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGIN 250 (364)
T ss_pred CCC-CcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccc-cccccCCccccccccccccchhhhceecccCCCCcc
Confidence 685 8999999999999986555543323221 012223210 11110 01112233222221 13456788899
Q ss_pred eeeeeeehhhhhhhchHHHHHHHHHHh-hccccccCCCccchhhhh------cCCeeecCccc-cccCCCCCcccccccc
Q 023261 167 TGVMVMDLVRWREGDYTRKIEKWMRIQ-KERRIYELGSLPPFLLVF------GGDVEAIDHRW-NQHGLGGHNVENSCRN 238 (285)
Q Consensus 167 sGVml~nl~~~r~~~~~~~~~~~~~~~-~~~~~~~~~dq~~lN~~~------~~~~~~L~~~w-N~~~~~~~~~~~~~~~ 238 (285)
+|=+|+.-.+|- ..++++...- -....+.+.+|+++-.++ .+.+..||.++ |....+. ...+
T Consensus 251 aGSfLirns~~~-----~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~~~-~~~g---- 320 (364)
T KOG4748|consen 251 AGSFLIRNSEWG-----RLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPNGA-PGYG---- 320 (364)
T ss_pred ccceEEecCccc-----hhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCCCC-CCCc----
Confidence 999999655543 2222222110 001223445777776554 36677788765 3332211 1111
Q ss_pred cCCCCceEEEecCC
Q 023261 239 LHAGPVSLMHWSGK 252 (285)
Q Consensus 239 ~~~~~~~IIHf~g~ 252 (285)
..+-.-++||+|=
T Consensus 321 -~~egdlvvhFaGC 333 (364)
T KOG4748|consen 321 -YEEGDLVVHFAGC 333 (364)
T ss_pred -cccCCeEEEeccc
Confidence 1234589999993
No 64
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=51.78 E-value=1e+02 Score=28.91 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARI 89 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 89 (285)
.+.-++.|+++.+-+ ++.+.|+.|+-+++..+.++++..+ +++++ +...... .+ .+... ..
T Consensus 89 ~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~~~~-~~~v~--vv~~~~n--~G-ka~Al-----------N~ 149 (444)
T PRK14583 89 NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDALLAE-DPRLR--VIHLAHN--QG-KAIAL-----------RM 149 (444)
T ss_pred HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHHHHh-CCCEE--EEEeCCC--CC-HHHHH-----------HH
Confidence 356678888876542 4888888887777777777766543 45443 3322111 01 01101 11
Q ss_pred hhHhhhccccCeEEEEecceeeecC-HHHHh
Q 023261 90 YLADILEPSIKRVIYLDSDVIVVDD-IQKLW 119 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~ 119 (285)
-+. .. ..|-++.+|+|.+...| +..+.
T Consensus 150 gl~--~a-~~d~iv~lDAD~~~~~d~L~~lv 177 (444)
T PRK14583 150 GAA--AA-RSEYLVCIDGDALLDKNAVPYLV 177 (444)
T ss_pred HHH--hC-CCCEEEEECCCCCcCHHHHHHHH
Confidence 111 12 36999999999999876 34443
No 65
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=51.56 E-value=1.2e+02 Score=23.80 Aligned_cols=93 Identities=14% Similarity=0.038 Sum_probs=50.4
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+.+.......+.+.|+.++-+++..+.+++... .++.+ .++.... .. + + ..++
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~-~~~~~--~~~~~~~-n~-G-~------------~~a~ 71 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAA-RVPRV--RVIRLSR-NF-G-K------------GAAV 71 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHH-hCCCe--EEEEccC-CC-C-c------------cHHH
Confidence 456678889988764223477766666655555556665543 34332 2222211 10 1 0 1111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
-..-+... -+-+++||+|..+..+ |..|...
T Consensus 72 n~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 72 RAGFKAAR--GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHHHHHhc--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 11112222 3889999999888765 6777764
No 66
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=51.40 E-value=1.6e+02 Score=28.33 Aligned_cols=109 Identities=11% Similarity=0.124 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHHh
Q 023261 11 TIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIY 90 (285)
Q Consensus 11 ~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ 90 (285)
++-++.|++....- .++.++|+.++-+++..+.++++. ..+|++++.+ .....-.. +....+ ..+....
T Consensus 81 I~~~l~s~L~~ldY-~~~eIiVv~d~ndd~T~~~v~~l~-~~~p~v~~vv--~~~~gp~~-Ka~aLN------~~l~~~~ 149 (504)
T PRK14716 81 IGRMLEHNLATLDY-ENYRIFVGTYPNDPATLREVDRLA-ARYPRVHLVI--VPHDGPTS-KADCLN------WIYQAIF 149 (504)
T ss_pred HHHHHHHHHHcCCC-CCeEEEEEECCCChhHHHHHHHHH-HHCCCeEEEE--eCCCCCCC-HHHHHH------HHHHHHH
Confidence 45567776654331 458888888776666666776664 3477654322 22110000 000010 0111111
Q ss_pred hHh-hhccccCeEEEEecceeeecCHHHHhccCCCCCceee
Q 023261 91 LAD-ILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIG 130 (285)
Q Consensus 91 i~~-llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~a 130 (285)
..+ .-...+|=++.+|+|.++..|.-.+++..+++..++.
T Consensus 150 ~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~~~~VQ 190 (504)
T PRK14716 150 AFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPRHDFVQ 190 (504)
T ss_pred HhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCCCCEEe
Confidence 111 1111258899999999999988777755454433333
No 67
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=50.90 E-value=1.1e+02 Score=23.23 Aligned_cols=88 Identities=18% Similarity=0.147 Sum_probs=48.5
Q ss_pred chhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 8 LRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 8 ~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
...+.-++.|+..... ....+.|+.++-.++..+.+++. .+ ++.+...+.. .+ . +.+
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~~~~~~~~~----~~--~~~~~~~~~~--~g------------~-~~a 65 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTDGSVELLREL----FP--EVRLIRNGEN--LG------------F-GAG 65 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCchHHHHHHHh----CC--CeEEEecCCC--cC------------h-HHH
Confidence 4556778999998765 34777777777665555555433 32 2333222110 00 0 111
Q ss_pred HHhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
|-..-+.. ..+-++++|+|.++..+ +..+.+
T Consensus 66 ~n~~~~~~--~~~~i~~~D~D~~~~~~~l~~~~~ 97 (166)
T cd04186 66 NNQGIREA--KGDYVLLLNPDTVVEPGALLELLD 97 (166)
T ss_pred hhHHHhhC--CCCEEEEECCCcEECccHHHHHHH
Confidence 11111222 26999999999999876 455554
No 68
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=50.24 E-value=1.2e+02 Score=24.89 Aligned_cols=87 Identities=15% Similarity=0.145 Sum_probs=47.7
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+...+ ...+.|+.++-+++..+.+.+.. ..+. +.+.. ... .+ ... +. .
T Consensus 14 ~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l~~~~--~~~~--~~v~~--~~~-~g-~~~----------a~-n 70 (235)
T cd06434 14 DVFRECLRSILRQK----PLEIIVVTDGDDEPYLSILSQTV--KYGG--IFVIT--VPH-PG-KRR----------AL-A 70 (235)
T ss_pred HHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHHHhhc--cCCc--EEEEe--cCC-CC-hHH----------HH-H
Confidence 55777889999876 36777777777666555553221 1222 22221 110 00 000 10 0
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
.-+. .. ..+-|+++|+|+++..+ |..+...
T Consensus 71 ~g~~-~a--~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 71 EGIR-HV--TTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred HHHH-Hh--CCCEEEEECCCceeChhHHHHHHHh
Confidence 1111 11 36999999999999987 5666644
No 69
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=49.30 E-value=89 Score=25.80 Aligned_cols=92 Identities=11% Similarity=-0.011 Sum_probs=50.4
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+.+....+..+.+.|+.++-+++..+.++++... .+. +.+.. + .. .+ .+ .++
T Consensus 13 ~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~-~~~--v~~i~-~-~~-~~-~~------------~a~ 73 (249)
T cd02525 13 KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAK-DPR--IRLID-N-PK-RI-QS------------AGL 73 (249)
T ss_pred hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhc-CCe--EEEEe-C-CC-CC-ch------------HHH
Confidence 4567788999877643356777777666666666666666433 332 22221 1 10 00 01 111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
-..-+.. ..|-++++|+|.++..+ |..+.+.
T Consensus 74 N~g~~~a--~~d~v~~lD~D~~~~~~~l~~~~~~ 105 (249)
T cd02525 74 NIGIRNS--RGDIIIRVDAHAVYPKDYILELVEA 105 (249)
T ss_pred HHHHHHh--CCCEEEEECCCccCCHHHHHHHHHH
Confidence 1111222 26899999999998754 5555543
No 70
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=46.51 E-value=1.2e+02 Score=26.06 Aligned_cols=25 Identities=28% Similarity=0.498 Sum_probs=20.8
Q ss_pred ccCeEEEEecceeee-cCHHHHhccCC
Q 023261 98 SIKRVIYLDSDVIVV-DDIQKLWRIPL 123 (285)
Q Consensus 98 ~~~rvlYLD~D~iv~-~dl~~L~~~dl 123 (285)
.++|||||+ |+++. .|+-+|....-
T Consensus 112 ~fd~VlfLN-DV~f~~~Dil~LL~~~~ 137 (241)
T PF11735_consen 112 RFDKVLFLN-DVFFCPEDILELLFTRN 137 (241)
T ss_pred CcCEEEEec-CcccCHHHHHHHHhhcC
Confidence 389999999 87776 79999988755
No 71
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=43.91 E-value=1.9e+02 Score=25.06 Aligned_cols=93 Identities=18% Similarity=0.095 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARI 89 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 89 (285)
.+..++.|+..... +..+.|.|+.++.+++..+.|++++.... .. .....+... . .+++ +-+|=
T Consensus 18 ~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~~~~~~l~~~~~~~~--~~-~~i~~~~~~--~---------~f~~-a~arN 81 (281)
T PF10111_consen 18 RLRNCLESLSQFQS-DPDFEIIVVDDGSSDEFDEELKKLCEKNG--FI-RYIRHEDNG--E---------PFSR-AKARN 81 (281)
T ss_pred HHHHHHHHHHhcCC-CCCEEEEEEECCCchhHHHHHHHHHhccC--ce-EEEEcCCCC--C---------CcCH-HHHHH
Confidence 34445677766544 35688766556655554567777765321 11 111111100 0 0111 11222
Q ss_pred hhHhhhccccCeEEEEecceeeecCH-HHHhc
Q 023261 90 YLADILEPSIKRVIYLDSDVIVVDDI-QKLWR 120 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~~dl-~~L~~ 120 (285)
...+.- .-+-++++|+|+++..+. ..+..
T Consensus 82 ~g~~~A--~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 82 IGAKYA--RGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHHHc--CCCEEEEEcCCeeeCHHHHHHHHH
Confidence 222222 269999999999998654 55555
No 72
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=43.18 E-value=1.7e+02 Score=23.28 Aligned_cols=84 Identities=19% Similarity=0.140 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHH-HHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhh
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTND-LAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~-L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~ 87 (285)
..+.-++.|++..+.. ...+.|+.|+-+.+.... ++++. ..++ ++++..... .+ + +.+
T Consensus 13 ~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~~~~-~~~~---i~~i~~~~n--~G-~------------~~a 71 (201)
T cd04195 13 EFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLEEFK-RKLP---LKVVPLEKN--RG-L------------GKA 71 (201)
T ss_pred HHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHHHHH-hcCC---eEEEEcCcc--cc-H------------HHH
Confidence 4677899999987643 356666667664554433 33332 2232 333322211 00 0 111
Q ss_pred HHhhHhhhccccCeEEEEecceeeecCH
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDDI 115 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~dl 115 (285)
|-..-.. . ..+-++++|+|.+...+-
T Consensus 72 ~N~g~~~-a-~gd~i~~lD~Dd~~~~~~ 97 (201)
T cd04195 72 LNEGLKH-C-TYDWVARMDTDDISLPDR 97 (201)
T ss_pred HHHHHHh-c-CCCEEEEeCCccccCcHH
Confidence 1111111 2 268899999999887543
No 73
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=40.80 E-value=2.1e+02 Score=26.17 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=50.5
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCc-eEEEEecchhhhcccccc--hhhhhccCchh
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYL-SFQVYLFREKFVTGLISS--SIRRALDSPLN 85 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~--~~~~~~~s~~~ 85 (285)
..+.-++.||+..+-+ ..+.+.|+.|+-+++..+.++++.. .+|.. ++++..... .-.+.... ..+. .
T Consensus 53 ~~L~~~L~sL~~q~yp-~~~eIIVVDd~StD~T~~i~~~~~~-~~~~~~~i~vi~~~~-~~~g~~Gk~~A~n~------g 123 (384)
T TIGR03469 53 DVIGECVTSLLEQDYP-GKLHVILVDDHSTDGTADIARAAAR-AYGRGDRLTVVSGQP-LPPGWSGKLWAVSQ------G 123 (384)
T ss_pred hHHHHHHHHHHhCCCC-CceEEEEEeCCCCCcHHHHHHHHHH-hcCCCCcEEEecCCC-CCCCCcchHHHHHH------H
Confidence 4567788898876532 2477776666666666666666643 24421 333332211 00000000 0000 0
Q ss_pred hhHHhhHhhhccccCeEEEEecceeeecC-HHHHhc
Q 023261 86 YARIYLADILEPSIKRVIYLDSDVIVVDD-IQKLWR 120 (285)
Q Consensus 86 y~Rl~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~ 120 (285)
.+- ..+..+. .|-++++|+|+++..+ +..+..
T Consensus 124 -~~~-A~~~~~~-gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 124 -IAA-ARTLAPP-ADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred -HHH-HhccCCC-CCEEEEECCCCCCChhHHHHHHH
Confidence 010 1112232 6899999999998754 466654
No 74
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=37.41 E-value=83 Score=25.99 Aligned_cols=23 Identities=13% Similarity=0.309 Sum_probs=20.1
Q ss_pred CeEEEEecceeeecCHHHHhccC
Q 023261 100 KRVIYLDSDVIVVDDIQKLWRIP 122 (285)
Q Consensus 100 ~rvlYLD~D~iv~~dl~~L~~~d 122 (285)
+.++.+.+|+++.-|+..+...-
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999988653
No 75
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=35.10 E-value=2.3e+02 Score=22.55 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=17.5
Q ss_pred ccCeEEEEecceeeecCH-HHHhc
Q 023261 98 SIKRVIYLDSDVIVVDDI-QKLWR 120 (285)
Q Consensus 98 ~~~rvlYLD~D~iv~~dl-~~L~~ 120 (285)
..+-++++|+|.++..+. .+|.+
T Consensus 79 ~~d~v~~ld~D~~~~~~~l~~l~~ 102 (202)
T cd04185 79 GYDWIWLMDDDAIPDPDALEKLLA 102 (202)
T ss_pred CCCEEEEeCCCCCcChHHHHHHHH
Confidence 479999999999998654 33443
No 76
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=35.05 E-value=3.1e+02 Score=24.98 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=29.3
Q ss_pred hhhhHHhhHhhhccccCeEEEEecceeeecCHHHH
Q 023261 84 LNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKL 118 (285)
Q Consensus 84 ~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L 118 (285)
.+++|.++-.+... .+-+|-||+-+.+..+=+++
T Consensus 103 p~~AR~la~~l~~g-E~y~LqiDSH~rF~~~WD~~ 136 (343)
T PF11397_consen 103 PCWARYLAQKLYRG-EDYYLQIDSHMRFVPGWDEI 136 (343)
T ss_pred hHHHHHHHHHHhCC-CeEEEEEeccceeeccHHHH
Confidence 58999999999985 79999999999999876553
No 77
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=33.28 E-value=3.1e+02 Score=23.51 Aligned_cols=23 Identities=30% Similarity=0.468 Sum_probs=18.9
Q ss_pred cCeEEEEecceeeecC-HHHHhcc
Q 023261 99 IKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 99 ~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
++-++.+|+|+++..| |..+...
T Consensus 96 ~~~i~~~DaD~~~~p~~l~~~v~~ 119 (254)
T cd04191 96 YDYMVVLDADSLMSGDTIVRLVRR 119 (254)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 7999999999999987 5666543
No 78
>KOG1342 consensus Histone deacetylase complex, catalytic component RPD3 [Chromatin structure and dynamics]
Probab=31.80 E-value=31 Score=31.66 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=26.8
Q ss_pred HHhhHhhhccccCeEEEEecceeeecCHHHHhcc
Q 023261 88 RIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRI 121 (285)
Q Consensus 88 Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~ 121 (285)
=|.|-++|.. ..||||+|-|+==-.=+.|-|..
T Consensus 155 VL~ILeLlK~-h~RVLYIDIDvHHGDGVEeAFy~ 187 (425)
T KOG1342|consen 155 VLGILELLKY-HKRVLYIDIDVHHGDGVEEAFYT 187 (425)
T ss_pred HHHHHHHHHh-CCceEEEEecccCCccHHHHHhc
Confidence 4667788885 78999999999877788887744
No 79
>PF11380 DUF3184: Protein of unknown function (DUF3184); InterPro: IPR021520 This eukaryotic family of proteins has no known function. ; GO: 0016772 transferase activity, transferring phosphorus-containing groups
Probab=31.71 E-value=1e+02 Score=29.97 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=52.4
Q ss_pred hHHHHHHHHHhcCCCCce--EEEEEeCCCCcccHHHH----HHHHHhhCCCce--------EEEEecchhhhccc-ccch
Q 023261 11 TIAAVHSVLKHTSCPENV--FFHFIAAESSPANTNDL----AQTVRSAFPYLS--------FQVYLFREKFVTGL-ISSS 75 (285)
Q Consensus 11 ~~v~l~Sl~~~~~~~~~~--~~~i~~~~~~~~~~~~L----~~~~~~~~~~~~--------i~~~~~~~~~~~~~-~~~~ 75 (285)
+.-+|.||.+|.+ .+ +|||+++|.-+.+++.- .+++. .+.+. .++..++.+.+... ....
T Consensus 11 LRySLRSl~~~ap---WvRgrI~IVT~GqvP~WLd~~~nf~~~~l~--~~rv~~vrssgth~RItIVhhd~~~P~~~lpT 85 (691)
T PF11380_consen 11 LRYSLRSLEQHAP---WVRGRIYIVTDGQVPSWLDTSKNFLASLLT--GARVQAVRSSGTHPRITIVHHDDFIPYEALPT 85 (691)
T ss_pred HHHHHHHHHhhCh---hhcceEEEECCCCCchhhccccccchhhcc--cceeeeeeccCCcceEEEecHHHhCCcccCCC
Confidence 4558899999985 34 48999998877766543 23332 11111 11222343333211 0001
Q ss_pred hhhhccCchhhhHHhhHhhhccccCeEEEEecceeeecCHH--HHhcc
Q 023261 76 IRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQ--KLWRI 121 (285)
Q Consensus 76 ~~~~~~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~--~L~~~ 121 (285)
. -|.. .=..++.| |.--+..||+--|+++.+++. ++|+-
T Consensus 86 F----NSha--IE~~LhrI-pgLSE~FIYfNDD~F~~rpV~p~DFF~~ 126 (691)
T PF11380_consen 86 F----NSHA--IESQLHRI-PGLSEHFIYFNDDYFFNRPVDPTDFFNE 126 (691)
T ss_pred c----chHH--HHHHHhcC-CCccceeEEecCCEEEcCcCCHHHhhcc
Confidence 1 1111 11122222 333588999999999999874 46644
No 80
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=30.51 E-value=2.6e+02 Score=21.68 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.||...+. ..+.+.|+.++-++...+.++++... .+ ..+... ...+. + .. . +..+
T Consensus 10 ~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~t~~~~~~~~~~-~~-~~~~~~-~~~~~--~-~~---------~-~~~~ 71 (182)
T cd06420 10 EALELVLKSVLNQSI--LPFEVIIADDGSTEETKELIEEFKSQ-FP-IPIKHV-WQEDE--G-FR---------K-AKIR 71 (182)
T ss_pred HHHHHHHHHHHhccC--CCCEEEEEeCCCchhHHHHHHHHHhh-cC-CceEEE-EcCCc--c-hh---------H-HHHH
Confidence 456778999988763 34677666666555544555544321 11 122111 11100 0 00 0 1111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
=..-+. . .-+-+++||+|.+...+ |..+.+.
T Consensus 72 n~g~~~-a-~g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 72 NKAIAA-A-KGDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred HHHHHH-h-cCCEEEEEcCCcccCHHHHHHHHHH
Confidence 111122 2 25899999999999766 4555544
No 81
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=29.14 E-value=3e+02 Score=21.98 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=22.8
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLA 46 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~ 46 (285)
..+.-+|.||+... . .+.+.|+.++-++...+.++
T Consensus 10 ~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~ 44 (191)
T cd06436 10 AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR 44 (191)
T ss_pred HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh
Confidence 45667888988765 2 36776776666665555554
No 82
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=27.84 E-value=78 Score=26.52 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=35.1
Q ss_pred HHHHHhcCCCCceEEEEEeC-CCCcccHHHHHHHHH------hhCCCceEEEEecchhhhcc
Q 023261 16 HSVLKHTSCPENVFFHFIAA-ESSPANTNDLAQTVR------SAFPYLSFQVYLFREKFVTG 70 (285)
Q Consensus 16 ~Sl~~~~~~~~~~~~~i~~~-~~~~~~~~~L~~~~~------~~~~~~~i~~~~~~~~~~~~ 70 (285)
.||-.+.+ .+++++|.++ +++++..+.|++.+. ..+ +++++++-+|++.+..
T Consensus 107 gSi~Qs~~--SDlDiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~-gvEv~FfLmd~~~fr~ 165 (204)
T PF12633_consen 107 GSIGQSSS--SDLDIWVCHDSDLSPEERQLLQQKCDLIEQWAASF-GVEVHFFLMDEERFRH 165 (204)
T ss_pred ccccCCCC--CCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCEEEEEEECHHHHhc
Confidence 34444443 4699998765 688888777765553 123 6888999999877754
No 83
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=24.74 E-value=56 Score=31.57 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=28.6
Q ss_pred hccccCeEEEEecceeeec-CHHHHhccCCCCCceeeeec
Q 023261 95 LEPSIKRVIYLDSDVIVVD-DIQKLWRIPLSGGRTIGAPE 133 (285)
Q Consensus 95 lp~~~~rvlYLD~D~iv~~-dl~~L~~~dl~~~~~~aa~~ 133 (285)
-|+.++-+|.+|+|+.|.. .+..|.+.-..+..++|++.
T Consensus 198 ~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG 237 (527)
T PF03142_consen 198 DPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCG 237 (527)
T ss_pred CccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEec
Confidence 3445899999999999996 56777765334456888865
No 84
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=24.51 E-value=3.4e+02 Score=21.09 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 9 RGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 9 ~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
..+.-++.|+.+.+.. .+.+.|+.++-+++..+.++++... +..+ +.... .+ .+.++
T Consensus 11 ~~l~~~l~sl~~q~~~--~~evivvDd~s~d~~~~~~~~~~~~------~~~~-~~~~~-~g-------------~~~a~ 67 (202)
T cd06433 11 ETLEETIDSVLSQTYP--NIEYIVIDGGSTDGTVDIIKKYEDK------ITYW-ISEPD-KG-------------IYDAM 67 (202)
T ss_pred HHHHHHHHHHHhCCCC--CceEEEEeCCCCccHHHHHHHhHhh------cEEE-EecCC-cC-------------HHHHH
Confidence 5567789999887642 3676555555555555555554321 1111 11110 00 01111
Q ss_pred HhhHhhhccccCeEEEEecceeeecC-HHHHh
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDD-IQKLW 119 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~ 119 (285)
-..-+.. .-+-|+++|+|.++..+ +..+.
T Consensus 68 n~~~~~a--~~~~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 68 NKGIALA--TGDIIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred HHHHHHc--CCCEEEEeCCCcccCchHHHHHH
Confidence 1111222 25889999999988765 66665
No 85
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=24.43 E-value=4.2e+02 Score=22.07 Aligned_cols=93 Identities=12% Similarity=0.041 Sum_probs=45.4
Q ss_pred hHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHHh
Q 023261 11 TIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIY 90 (285)
Q Consensus 11 ~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ 90 (285)
+..++.++.+.......+.+.|+.|+-++...+.++++.. .++...+.+..-. ... + .. .++- .-
T Consensus 24 l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~-~~~~~~v~~~~~~-~n~-G-~~----------~a~n-~g 88 (243)
T PLN02726 24 IALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQK-VYGEDRILLRPRP-GKL-G-LG----------TAYI-HG 88 (243)
T ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHH-hcCCCcEEEEecC-CCC-C-HH----------HHHH-HH
Confidence 3445556655433223577766666666666666665543 2433333332111 000 0 00 1111 11
Q ss_pred hHhhhccccCeEEEEecceeeec-CHHHHhcc
Q 023261 91 LADILEPSIKRVIYLDSDVIVVD-DIQKLWRI 121 (285)
Q Consensus 91 i~~llp~~~~rvlYLD~D~iv~~-dl~~L~~~ 121 (285)
+ ... .-+-++++|+|..... .|..|++.
T Consensus 89 ~-~~a--~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 89 L-KHA--SGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred H-HHc--CCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 1 112 2589999999998754 45566654
No 86
>PRK10063 putative glycosyl transferase; Provisional
Probab=23.63 E-value=4.6e+02 Score=22.25 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=15.2
Q ss_pred cCeEEEEecceeeecCHHH
Q 023261 99 IKRVIYLDSDVIVVDDIQK 117 (285)
Q Consensus 99 ~~rvlYLD~D~iv~~dl~~ 117 (285)
-+-|++||+|-+...+..+
T Consensus 83 g~~v~~ld~DD~~~~~~~~ 101 (248)
T PRK10063 83 GRFALFLNSGDIFHQDAAN 101 (248)
T ss_pred CCEEEEEeCCcccCcCHHH
Confidence 5899999999888877533
No 87
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=23.42 E-value=61 Score=33.13 Aligned_cols=42 Identities=14% Similarity=0.246 Sum_probs=31.9
Q ss_pred hhHhhhccccCeEEEEecceeee-cCHHHHhcc-CCCCCceeeeec
Q 023261 90 YLADILEPSIKRVIYLDSDVIVV-DDIQKLWRI-PLSGGRTIGAPE 133 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~-~dl~~L~~~-dl~~~~~~aa~~ 133 (285)
+.+.+.|. ++-|+.+|+|+.+. ..|.+||+. +.+. .++||+.
T Consensus 433 ~~~~L~~~-v~~il~vD~dT~~~P~ai~~lv~~f~~dp-~VggaCG 476 (862)
T KOG2571|consen 433 AFKALMPS-VDYILVVDADTRLDPDALYHLVKVFDEDP-QVGGACG 476 (862)
T ss_pred HHHHhcCc-ceEEEEecCCCccCcHHHHHHHHHhccCc-ccceecc
Confidence 34566774 89999999999998 478889887 4443 5788754
No 88
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=21.92 E-value=2.4e+02 Score=24.15 Aligned_cols=44 Identities=9% Similarity=0.200 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCCCceEEEEEeC-CCCcccHHHHHHHHHhhCCCceE
Q 023261 12 IAAVHSVLKHTSCPENVFFHFIAA-ESSPANTNDLAQTVRSAFPYLSF 58 (285)
Q Consensus 12 ~v~l~Sl~~~~~~~~~~~~~i~~~-~~~~~~~~~L~~~~~~~~~~~~i 58 (285)
.+++-||...+. .++.+.|+++ ..++...++|++++.. +|.+.+
T Consensus 45 ~~~LpSl~~QTd--~dF~~lv~~~~~~P~~~~~rL~~l~~~-~p~~~i 89 (234)
T PF11316_consen 45 TYCLPSLRAQTD--QDFTWLVLFDDDLPEPYRERLRDLLAD-YPQFRI 89 (234)
T ss_pred HHHhhHHHhccC--CCeEEEEEECCCCCHHHHHHHHHHhcc-CCCcEE
Confidence 468999999986 4588877665 4566667788888643 554444
No 89
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=21.41 E-value=4.5e+02 Score=21.41 Aligned_cols=93 Identities=12% Similarity=0.070 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHhcCCCCceEEEEEeCCCCcccH-HHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhH
Q 023261 10 GTIAAVHSVLKHTSCPENVFFHFIAAESSPANT-NDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYAR 88 (285)
Q Consensus 10 ~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~-~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~R 88 (285)
.+.-++.||....- ..+.+.|+.++-++... +.+++++.+.. .++.+...+.. .+.... + .-
T Consensus 13 ~l~~~l~sl~~q~~--~~~eiiVvdd~s~D~t~~~~i~~~~~~~~--~~i~~i~~~~~--~G~~~~----------a-~n 75 (236)
T cd06435 13 MVKETLDSLAALDY--PNFEVIVIDNNTKDEALWKPVEAHCAQLG--ERFRFFHVEPL--PGAKAG----------A-LN 75 (236)
T ss_pred HHHHHHHHHHhCCC--CCcEEEEEeCCCCchhHHHHHHHHHHHhC--CcEEEEEcCCC--CCCchH----------H-HH
Confidence 45677888886543 23677555555444432 45555554322 23333322210 111010 0 01
Q ss_pred HhhHhhhccccCeEEEEecceeeecCH-HHHhc
Q 023261 89 IYLADILEPSIKRVIYLDSDVIVVDDI-QKLWR 120 (285)
Q Consensus 89 l~i~~llp~~~~rvlYLD~D~iv~~dl-~~L~~ 120 (285)
..+...-+ ..|=++++|+|.++..+- .++..
T Consensus 76 ~g~~~a~~-~~d~i~~lD~D~~~~~~~l~~l~~ 107 (236)
T cd06435 76 YALERTAP-DAEIIAVIDADYQVEPDWLKRLVP 107 (236)
T ss_pred HHHHhcCC-CCCEEEEEcCCCCcCHHHHHHHHH
Confidence 11111112 268899999999887643 44443
No 90
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=21.03 E-value=4.5e+02 Score=23.09 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=48.2
Q ss_pred cchhhHHHHHHHHHhcCCCCceEEEEEeCCCC--cccHHHHHHHHHh---------hCCCceEEEEecchhhhccc-cc-
Q 023261 7 YLRGTIAAVHSVLKHTSCPENVFFHFIAAESS--PANTNDLAQTVRS---------AFPYLSFQVYLFREKFVTGL-IS- 73 (285)
Q Consensus 7 y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~--~~~~~~L~~~~~~---------~~~~~~i~~~~~~~~~~~~~-~~- 73 (285)
|++...-.|.|| ..+ .+.+.+=+++.+.+ +...+.|++.+.+ .|.. +.+..=|.....+. .+
T Consensus 39 ~l~~y~~~L~~L--~YP-~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~--itIl~~df~~~~~~~~~~ 113 (269)
T PF03452_consen 39 FLPDYFDNLLSL--TYP-HELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRS--ITILRKDFGQQLSQDRSE 113 (269)
T ss_pred HHHHHHHHHHhC--CCC-chheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcce--EEEEcCCCcccccCchhh
Confidence 444444455555 223 36688877888877 5556666655432 1322 22222222111110 00
Q ss_pred ---chhhhhccCchhhhHHh--hHhhhccccCeEEEEeccee
Q 023261 74 ---SSIRRALDSPLNYARIY--LADILEPSIKRVIYLDSDVI 110 (285)
Q Consensus 74 ---~~~~~~~~s~~~y~Rl~--i~~llp~~~~rvlYLD~D~i 110 (285)
......+.+.++=+|=+ ...+=|. .+-|++||+|++
T Consensus 114 RH~~~~Q~~RR~~mAraRN~LL~~aL~p~-~swVlWlDaDIv 154 (269)
T PF03452_consen 114 RHAFEVQRPRRRAMARARNFLLSSALGPW-HSWVLWLDADIV 154 (269)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCCc-ccEEEEEecCcc
Confidence 00101111224445544 3344454 899999999999
No 91
>PF12123 Amidase02_C: N-acetylmuramoyl-l-alanine amidase; InterPro: IPR021976 This domain is found in bacteria and viruses. This domain is about 50 amino acids in length. This domain is classified with the enzyme classification code 3.5.1.28 from EC. This domain is the C-terminal of the enzyme which hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides. ; PDB: 2L48_B.
Probab=20.85 E-value=1e+02 Score=19.08 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=15.0
Q ss_pred EEEEeCCCCcccHHHHHHHHHh
Q 023261 30 FHFIAAESSPANTNDLAQTVRS 51 (285)
Q Consensus 30 ~~i~~~~~~~~~~~~L~~~~~~ 51 (285)
.|++++..|.++++++++.+.+
T Consensus 17 ~y~vT~~~s~~~L~k~~~wld~ 38 (45)
T PF12123_consen 17 PYFVTDPLSDAELDKFTAWLDE 38 (45)
T ss_dssp EEEEE----HHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHh
Confidence 3688999999999999988865
No 92
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=20.29 E-value=3.1e+02 Score=19.04 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=13.1
Q ss_pred cCeEEEEecceeeecC
Q 023261 99 IKRVIYLDSDVIVVDD 114 (285)
Q Consensus 99 ~~rvlYLD~D~iv~~d 114 (285)
.+-++++|+|=++.-+
T Consensus 72 ~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 72 ADWVLFLDADEFLVPP 87 (97)
T ss_pred CCEEEEEeeeEEEecC
Confidence 7999999999777643
No 93
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=20.13 E-value=4.2e+02 Score=20.54 Aligned_cols=91 Identities=13% Similarity=0.038 Sum_probs=46.1
Q ss_pred hHHHHHHHHHhcC-CCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhccCchhhhHH
Q 023261 11 TIAAVHSVLKHTS-CPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARI 89 (285)
Q Consensus 11 ~~v~l~Sl~~~~~-~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 89 (285)
+.-++.||..... ....+.+.|+.++-+++..+.++.+.. ..+++ .+...... .+ ...-.+.
T Consensus 12 l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~-~~~~i--~~i~~~~n--~G------------~~~a~n~ 74 (181)
T cd04187 12 LPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAA-RDPRV--KVIRLSRN--FG------------QQAALLA 74 (181)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHh-hCCCE--EEEEecCC--CC------------cHHHHHH
Confidence 3345555544332 123477777666666666666666543 24433 32222110 00 1111122
Q ss_pred hhHhhhccccCeEEEEecceeeecC-HHHHhcc
Q 023261 90 YLADILEPSIKRVIYLDSDVIVVDD-IQKLWRI 121 (285)
Q Consensus 90 ~i~~llp~~~~rvlYLD~D~iv~~d-l~~L~~~ 121 (285)
.+.. .. -+-++++|+|.....+ +..+...
T Consensus 75 g~~~-a~--~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 75 GLDH-AR--GDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred HHHh-cC--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 2222 22 3889999999998654 6777765
Done!