Query 023270
Match_columns 284
No_of_seqs 129 out of 1545
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 02:45:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023270.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023270hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0575 Polo-like serine/threo 100.0 5.6E-58 1.2E-62 392.8 24.8 259 19-279 18-279 (592)
2 KOG0615 Serine/threonine prote 100.0 1.4E-58 2.9E-63 379.6 15.1 260 17-276 170-444 (475)
3 KOG0581 Mitogen-activated prot 100.0 1.8E-57 4E-62 369.6 21.0 265 13-279 73-345 (364)
4 KOG0598 Ribosomal protein S6 k 100.0 4.1E-54 8.9E-59 349.9 22.7 259 15-274 21-286 (357)
5 KOG0592 3-phosphoinositide-dep 100.0 2.9E-53 6.4E-58 358.9 21.9 259 15-275 69-344 (604)
6 KOG0616 cAMP-dependent protein 100.0 8.7E-53 1.9E-57 332.2 22.1 258 16-275 41-303 (355)
7 PTZ00263 protein kinase A cata 100.0 2.3E-52 4.9E-57 356.8 25.2 262 12-275 11-277 (329)
8 KOG0605 NDR and related serine 100.0 2.7E-52 5.9E-57 352.9 24.9 265 11-276 133-452 (550)
9 KOG0593 Predicted protein kina 100.0 2.3E-53 5.1E-58 336.5 16.2 255 18-274 1-289 (396)
10 KOG0583 Serine/threonine prote 100.0 5.8E-52 1.3E-56 354.6 25.9 258 15-274 13-280 (370)
11 KOG0580 Serine/threonine prote 100.0 9.5E-53 2.1E-57 322.8 16.2 263 11-275 14-279 (281)
12 KOG0595 Serine/threonine-prote 100.0 1.2E-51 2.6E-56 338.7 23.2 263 17-280 8-279 (429)
13 cd05612 STKc_PRKX_like Catalyt 100.0 1.9E-51 4.1E-56 345.5 25.0 255 19-275 1-260 (291)
14 PTZ00426 cAMP-dependent protei 100.0 1.2E-50 2.7E-55 347.1 25.5 263 11-275 22-290 (340)
15 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-50 8.4E-55 343.7 26.4 257 19-275 1-263 (333)
16 KOG0661 MAPK related serine/th 100.0 2.3E-51 5E-56 342.4 16.7 260 14-276 5-298 (538)
17 KOG0198 MEKK and related serin 100.0 7E-51 1.5E-55 335.6 19.4 257 18-277 16-284 (313)
18 KOG0591 NIMA (never in mitosis 100.0 2.4E-52 5.2E-57 327.7 9.4 257 14-276 14-283 (375)
19 KOG0659 Cdk activating kinase 100.0 2.6E-50 5.6E-55 313.8 19.9 259 19-279 2-291 (318)
20 cd05571 STKc_PKB Catalytic dom 100.0 1E-49 2.2E-54 339.6 25.0 249 25-275 1-257 (323)
21 cd05628 STKc_NDR1 Catalytic do 100.0 4.6E-49 1E-53 340.7 27.6 257 19-275 1-299 (363)
22 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-49 2.4E-54 343.2 23.5 256 19-275 1-291 (350)
23 KOG0582 Ste20-like serine/thre 100.0 1.8E-49 3.9E-54 328.9 23.0 268 9-278 16-302 (516)
24 KOG0597 Serine-threonine prote 100.0 1.7E-50 3.8E-55 343.4 17.2 254 18-275 1-257 (808)
25 KOG0588 Serine/threonine prote 100.0 4E-50 8.8E-55 346.7 19.5 260 18-279 11-273 (786)
26 cd05585 STKc_YPK1_like Catalyt 100.0 5.9E-49 1.3E-53 333.5 25.0 247 27-275 1-253 (312)
27 cd05599 STKc_NDR_like Catalyti 100.0 7.4E-49 1.6E-53 339.8 25.6 256 19-275 1-302 (364)
28 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-48 2.6E-53 338.6 26.1 266 9-275 33-310 (370)
29 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-48 3.1E-53 332.6 25.8 249 25-275 1-257 (323)
30 cd05626 STKc_LATS2 Catalytic d 100.0 1.8E-48 3.9E-53 339.1 26.9 257 19-275 1-311 (381)
31 KOG0600 Cdc2-related protein k 100.0 2.1E-49 4.5E-54 332.9 19.5 257 17-275 115-406 (560)
32 KOG0192 Tyrosine kinase specif 100.0 1.6E-48 3.5E-53 330.7 25.0 255 12-269 34-299 (362)
33 cd05587 STKc_cPKC Catalytic do 100.0 2.7E-48 5.9E-53 331.1 26.5 254 20-275 1-263 (324)
34 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-48 3.7E-53 332.7 25.2 249 25-275 1-257 (328)
35 cd05629 STKc_NDR_like_fungal C 100.0 1.7E-48 3.8E-53 338.9 25.4 256 19-275 1-311 (377)
36 cd06649 PKc_MEK2 Catalytic dom 100.0 7.1E-48 1.5E-52 329.4 28.4 260 16-277 2-309 (331)
37 KOG0610 Putative serine/threon 100.0 1.6E-48 3.5E-53 320.6 23.2 266 11-276 69-399 (459)
38 KOG0578 p21-activated serine/t 100.0 1.4E-49 3E-54 338.6 17.5 254 19-276 273-530 (550)
39 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-48 7.1E-53 324.9 25.5 256 20-275 1-267 (285)
40 cd05625 STKc_LATS1 Catalytic d 100.0 3.2E-48 7E-53 337.7 26.3 256 19-275 1-311 (382)
41 cd05590 STKc_nPKC_eta Catalyti 100.0 2.5E-48 5.4E-53 330.6 24.9 249 25-275 1-259 (320)
42 cd05598 STKc_LATS Catalytic do 100.0 1.7E-48 3.6E-53 338.9 24.0 256 19-275 1-307 (376)
43 KOG0663 Protein kinase PITSLRE 100.0 3E-49 6.5E-54 316.9 17.7 263 17-281 74-373 (419)
44 cd07848 STKc_CDKL5 Catalytic d 100.0 2.4E-48 5.1E-53 326.0 24.1 253 19-272 1-287 (287)
45 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-48 3.2E-53 333.6 23.1 256 19-275 1-269 (330)
46 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-50 3.3E-55 312.0 9.8 256 19-275 11-273 (355)
47 KOG0585 Ca2+/calmodulin-depend 100.0 2.9E-49 6.2E-54 329.8 17.7 264 11-275 89-378 (576)
48 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.1E-48 8.8E-53 324.8 24.9 254 16-272 2-288 (288)
49 cd05621 STKc_ROCK2 Catalytic d 100.0 5.7E-48 1.2E-52 334.1 26.0 267 8-275 32-310 (370)
50 cd05589 STKc_PKN Catalytic dom 100.0 7.2E-48 1.6E-52 328.5 26.1 252 21-275 1-263 (324)
51 cd05591 STKc_nPKC_epsilon Cata 100.0 6E-48 1.3E-52 328.5 24.9 248 25-274 1-259 (321)
52 cd05616 STKc_cPKC_beta Catalyt 100.0 9.5E-48 2.1E-52 327.6 25.9 254 20-275 1-263 (323)
53 cd05594 STKc_PKB_alpha Catalyt 100.0 4E-48 8.6E-53 330.2 22.7 249 25-275 1-258 (325)
54 cd05627 STKc_NDR2 Catalytic do 100.0 6.4E-48 1.4E-52 333.4 23.8 256 19-275 1-299 (360)
55 cd05570 STKc_PKC Catalytic dom 100.0 1.5E-47 3.2E-52 325.6 25.4 249 25-275 1-258 (318)
56 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-47 3.6E-52 325.0 25.3 249 25-275 1-254 (316)
57 KOG0660 Mitogen-activated prot 100.0 3.1E-48 6.7E-53 314.6 19.7 260 17-278 20-319 (359)
58 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-47 2.6E-52 324.2 24.2 258 17-277 3-296 (303)
59 cd05580 STKc_PKA Catalytic dom 100.0 5.1E-47 1.1E-51 318.5 27.8 256 19-276 1-261 (290)
60 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-47 6.2E-52 330.0 27.1 265 11-276 35-311 (371)
61 cd05584 STKc_p70S6K Catalytic 100.0 2.6E-47 5.7E-52 324.8 25.8 250 24-275 1-262 (323)
62 cd05588 STKc_aPKC Catalytic do 100.0 2.2E-47 4.7E-52 326.1 25.3 249 25-275 1-268 (329)
63 KOG0032 Ca2+/calmodulin-depend 100.0 1.9E-47 4.2E-52 326.7 24.9 257 18-275 34-299 (382)
64 cd05592 STKc_nPKC_theta_delta 100.0 2.8E-47 6.1E-52 323.6 25.4 249 25-275 1-254 (316)
65 cd05575 STKc_SGK Catalytic dom 100.0 2.1E-47 4.5E-52 325.5 24.6 249 25-275 1-257 (323)
66 cd05615 STKc_cPKC_alpha Cataly 100.0 7.3E-47 1.6E-51 322.0 26.6 254 20-275 1-263 (323)
67 KOG0611 Predicted serine/threo 100.0 3.4E-48 7.3E-53 318.4 16.9 254 19-275 53-309 (668)
68 cd05618 STKc_aPKC_iota Catalyt 100.0 4.1E-47 9E-52 324.3 24.3 249 25-275 1-268 (329)
69 cd06650 PKc_MEK1 Catalytic dom 100.0 9E-47 1.9E-51 322.7 26.4 259 16-276 2-306 (333)
70 cd05619 STKc_nPKC_theta Cataly 100.0 7.4E-47 1.6E-51 321.0 25.6 249 25-275 1-254 (316)
71 cd06625 STKc_MEKK3_like Cataly 100.0 1.7E-46 3.6E-51 310.7 27.1 254 19-272 2-263 (263)
72 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.1E-47 1.1E-51 325.0 24.8 256 20-277 1-298 (338)
73 cd05614 STKc_MSK2_N N-terminal 100.0 9.4E-47 2E-51 322.7 25.6 254 20-275 1-273 (332)
74 cd05597 STKc_DMPK_like Catalyt 100.0 2.3E-46 4.9E-51 320.1 27.1 257 19-275 1-272 (331)
75 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-46 2.9E-51 314.3 24.7 247 27-275 1-263 (280)
76 cd05605 STKc_GRK4_like Catalyt 100.0 1.8E-46 3.8E-51 314.4 25.4 256 20-275 1-267 (285)
77 PHA03212 serine/threonine kina 100.0 2.5E-46 5.4E-51 325.7 27.1 255 14-278 87-385 (391)
78 PF00069 Pkinase: Protein kina 100.0 4.2E-47 9.1E-52 313.6 20.9 251 21-272 1-260 (260)
79 KOG0694 Serine/threonine prote 100.0 2.3E-47 5.1E-52 331.3 19.8 259 14-275 363-630 (694)
80 cd05574 STKc_phototropin_like 100.0 3.3E-46 7.1E-51 317.2 26.6 259 19-277 1-297 (316)
81 cd05582 STKc_RSK_N N-terminal 100.0 4.8E-47 1E-51 322.6 21.3 249 24-275 1-260 (318)
82 KOG0197 Tyrosine kinases [Sign 100.0 2E-47 4.3E-52 324.3 18.6 251 12-268 199-456 (468)
83 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-46 3E-51 320.7 23.1 249 25-275 1-257 (325)
84 cd05603 STKc_SGK2 Catalytic do 100.0 2.4E-46 5.2E-51 318.7 24.6 248 25-274 1-256 (321)
85 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-46 6.1E-51 324.4 25.4 257 20-278 1-297 (372)
86 KOG0599 Phosphorylase kinase g 100.0 4.5E-48 9.7E-53 302.8 12.4 260 15-274 13-288 (411)
87 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.3E-46 9.2E-51 317.9 25.2 249 25-275 1-266 (327)
88 cd07876 STKc_JNK2 Catalytic do 100.0 7.7E-46 1.7E-50 320.3 26.4 257 16-276 18-322 (359)
89 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.2E-46 1.1E-50 315.1 24.8 259 16-277 3-294 (309)
90 cd05602 STKc_SGK1 Catalytic do 100.0 4.1E-46 9E-51 317.8 24.3 248 25-274 1-256 (325)
91 PLN00034 mitogen-activated pro 100.0 1.8E-46 4E-51 323.4 22.3 259 14-279 69-338 (353)
92 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-46 3.3E-51 321.1 21.5 248 27-275 1-259 (330)
93 KOG0589 Serine/threonine prote 100.0 3.6E-47 7.9E-52 321.4 16.6 255 17-273 2-262 (426)
94 PHA02988 hypothetical protein; 100.0 9.3E-46 2E-50 309.6 25.0 256 12-269 11-275 (283)
95 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-45 2.8E-50 315.6 26.3 257 19-275 1-272 (332)
96 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-45 2.3E-50 315.9 25.6 257 19-275 1-272 (331)
97 cd07862 STKc_CDK6 Catalytic do 100.0 5.7E-46 1.2E-50 312.0 23.6 252 19-272 1-290 (290)
98 cd06609 STKc_MST3_like Catalyt 100.0 9.8E-46 2.1E-50 308.1 24.6 255 19-276 1-258 (274)
99 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.4E-46 1.6E-50 318.6 24.4 260 16-278 12-307 (343)
100 KOG0667 Dual-specificity tyros 100.0 2.4E-46 5.2E-51 324.3 21.2 253 20-277 187-510 (586)
101 PTZ00036 glycogen synthase kin 100.0 1.1E-45 2.3E-50 326.4 25.8 254 16-277 63-359 (440)
102 cd05609 STKc_MAST Catalytic do 100.0 5.1E-45 1.1E-49 308.4 28.8 257 19-275 1-279 (305)
103 PTZ00267 NIMA-related protein 100.0 1.6E-45 3.5E-50 328.7 26.6 254 17-274 65-328 (478)
104 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.3E-45 2.9E-50 311.4 24.7 260 16-278 3-295 (301)
105 KOG0594 Protein kinase PCTAIRE 100.0 3E-46 6.5E-51 303.5 19.8 259 18-278 10-311 (323)
106 cd08529 STKc_FA2-like Catalyti 100.0 4.6E-45 1E-49 300.8 27.3 251 20-272 1-256 (256)
107 PTZ00283 serine/threonine prot 100.0 1.6E-45 3.4E-50 329.2 26.2 262 11-274 24-302 (496)
108 cd06615 PKc_MEK Catalytic doma 100.0 2.8E-45 6.1E-50 310.4 26.4 258 19-278 1-296 (308)
109 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-45 2.8E-50 308.0 23.9 248 27-275 1-260 (277)
110 cd05578 STKc_Yank1 Catalytic d 100.0 1.1E-45 2.3E-50 305.2 23.1 251 20-272 1-258 (258)
111 KOG0201 Serine/threonine prote 100.0 5.3E-48 1.2E-52 319.6 8.8 254 19-275 13-269 (467)
112 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.2E-45 6.9E-50 303.8 25.4 252 20-272 1-267 (267)
113 PTZ00284 protein kinase; Provi 100.0 2.1E-45 4.6E-50 327.6 26.1 254 17-275 127-444 (467)
114 KOG0658 Glycogen synthase kina 100.0 6.2E-47 1.3E-51 307.5 14.7 252 19-278 24-315 (364)
115 cd05572 STKc_cGK_PKG Catalytic 100.0 3.1E-45 6.7E-50 303.1 25.1 248 27-274 1-257 (262)
116 cd05632 STKc_GRK5 Catalytic do 100.0 7.6E-45 1.6E-49 304.5 26.7 256 20-275 1-267 (285)
117 cd06651 STKc_MEKK3 Catalytic d 100.0 6.5E-45 1.4E-49 301.9 25.8 254 19-273 2-265 (266)
118 cd05630 STKc_GRK6 Catalytic do 100.0 3.5E-45 7.7E-50 306.5 24.1 255 20-275 1-267 (285)
119 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-44 2.4E-49 300.3 26.6 252 20-272 1-265 (265)
120 cd07875 STKc_JNK1 Catalytic do 100.0 5.8E-45 1.2E-49 315.4 25.8 255 17-275 22-324 (364)
121 cd08223 STKc_Nek4 Catalytic do 100.0 2E-44 4.3E-49 297.3 27.8 251 20-272 1-257 (257)
122 cd07874 STKc_JNK3 Catalytic do 100.0 4.4E-45 9.6E-50 315.1 24.9 257 16-276 14-318 (355)
123 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.3E-45 9.3E-50 313.2 23.9 253 14-268 2-329 (338)
124 cd06619 PKc_MKK5 Catalytic dom 100.0 9.8E-45 2.1E-49 302.9 25.4 253 19-277 1-261 (279)
125 cd06655 STKc_PAK2 Catalytic do 100.0 1.3E-44 2.9E-49 304.6 26.4 254 19-276 19-276 (296)
126 cd07863 STKc_CDK4 Catalytic do 100.0 4.1E-45 8.9E-50 306.5 23.0 251 20-272 1-288 (288)
127 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-44 2.4E-49 305.1 25.7 255 18-276 19-277 (296)
128 cd07841 STKc_CDK7 Catalytic do 100.0 7.8E-45 1.7E-49 306.2 24.7 261 20-281 1-294 (298)
129 cd08221 STKc_Nek9 Catalytic do 100.0 2.6E-44 5.7E-49 296.5 27.1 251 20-272 1-256 (256)
130 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-44 2.6E-49 300.1 25.1 252 19-272 1-267 (267)
131 cd06656 STKc_PAK3 Catalytic do 100.0 6.9E-45 1.5E-49 306.5 24.0 257 18-278 18-278 (297)
132 cd06643 STKc_SLK Catalytic dom 100.0 1.7E-44 3.6E-49 301.9 25.8 254 21-277 7-270 (282)
133 cd06611 STKc_SLK_like Catalyti 100.0 6.4E-45 1.4E-49 304.1 23.2 255 19-276 5-269 (280)
134 cd06652 STKc_MEKK2 Catalytic d 100.0 2.2E-44 4.8E-49 298.5 26.2 254 19-273 2-265 (265)
135 cd06623 PKc_MAPKK_plant_like C 100.0 2E-44 4.4E-49 298.2 25.9 255 19-276 1-263 (264)
136 cd06644 STKc_STK10_LOK Catalyt 100.0 2.4E-44 5.2E-49 302.5 26.6 257 19-278 12-278 (292)
137 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-44 2.6E-49 303.2 24.4 253 19-272 1-286 (286)
138 cd06632 STKc_MEKK1_plant Catal 100.0 2.2E-44 4.7E-49 297.1 25.5 253 20-272 1-258 (258)
139 KOG4717 Serine/threonine prote 100.0 1.1E-45 2.4E-50 311.4 17.9 259 20-281 19-282 (864)
140 cd06605 PKc_MAPKK Catalytic do 100.0 6.4E-45 1.4E-49 301.6 22.2 254 19-274 1-262 (265)
141 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-44 2.5E-49 309.2 24.4 253 23-276 2-314 (327)
142 cd08218 STKc_Nek1 Catalytic do 100.0 2.9E-44 6.2E-49 296.3 25.6 251 20-272 1-256 (256)
143 cd06630 STKc_MEKK1 Catalytic d 100.0 2.5E-44 5.5E-49 298.5 25.2 254 20-273 1-268 (268)
144 cd05581 STKc_PDK1 Catalytic do 100.0 1.6E-44 3.5E-49 301.3 24.1 252 19-272 1-280 (280)
145 cd06645 STKc_MAP4K3 Catalytic 100.0 1.1E-44 2.5E-49 300.5 22.9 254 15-271 5-267 (267)
146 cd06613 STKc_MAP4K3_like Catal 100.0 3.8E-44 8.2E-49 296.4 25.9 250 19-271 3-262 (262)
147 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-44 7.4E-49 298.4 25.7 253 20-272 2-272 (272)
148 cd07861 STKc_CDK1_euk Catalyti 100.0 2.2E-44 4.7E-49 301.6 24.5 251 20-272 1-285 (285)
149 cd05611 STKc_Rim15_like Cataly 100.0 4E-44 8.6E-49 296.1 25.7 251 25-276 2-258 (260)
150 cd06646 STKc_MAP4K5 Catalytic 100.0 1.5E-44 3.2E-49 299.8 22.8 252 17-271 7-267 (267)
151 cd06607 STKc_TAO Catalytic dom 100.0 3.8E-44 8.2E-49 303.4 25.6 258 18-277 14-275 (307)
152 cd06648 STKc_PAK_II Catalytic 100.0 5.5E-44 1.2E-48 299.3 26.4 256 20-279 20-279 (285)
153 cd06612 STKc_MST1_2 Catalytic 100.0 3.5E-44 7.6E-49 295.6 24.7 249 19-272 3-256 (256)
154 cd05579 STKc_MAST_like Catalyt 100.0 3.2E-44 6.9E-49 297.0 24.3 248 27-274 1-262 (265)
155 cd06637 STKc_TNIK Catalytic do 100.0 2.8E-44 6E-49 298.9 24.0 250 19-272 6-272 (272)
156 PTZ00266 NIMA-related protein 100.0 2.8E-44 6E-49 332.8 26.4 266 11-278 5-304 (1021)
157 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.4E-44 5.3E-49 301.4 23.6 253 19-272 1-286 (286)
158 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.4E-44 5.2E-49 301.3 23.2 260 16-277 2-274 (284)
159 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-43 2.2E-48 294.1 26.6 252 20-272 1-264 (264)
160 cd06606 STKc_MAPKKK Catalytic 100.0 1E-43 2.2E-48 292.8 26.3 252 20-272 1-260 (260)
161 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-44 2.8E-49 302.8 21.2 251 20-272 1-284 (284)
162 cd07832 STKc_CCRK Catalytic do 100.0 6.3E-44 1.4E-48 298.8 25.4 252 20-273 1-286 (286)
163 cd08220 STKc_Nek8 Catalytic do 100.0 9.4E-44 2E-48 293.0 25.8 251 20-272 1-256 (256)
164 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5E-44 1.1E-48 299.6 24.3 258 19-278 1-271 (286)
165 cd06658 STKc_PAK5 Catalytic do 100.0 3.8E-44 8.3E-49 301.2 23.4 258 19-280 22-283 (292)
166 cd07845 STKc_CDK10 Catalytic d 100.0 5.1E-44 1.1E-48 302.9 24.0 264 17-282 5-303 (309)
167 PHA03209 serine/threonine kina 100.0 4.2E-44 9.1E-49 309.0 23.4 248 17-274 64-356 (357)
168 cd07833 STKc_CDKL Catalytic do 100.0 1E-43 2.2E-48 297.9 25.0 253 19-272 1-288 (288)
169 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.8E-44 1.9E-48 297.5 24.6 254 15-272 12-282 (282)
170 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.5E-43 3.4E-48 293.7 25.4 250 16-268 2-260 (266)
171 cd08217 STKc_Nek2 Catalytic do 100.0 2.1E-43 4.5E-48 292.1 26.0 251 20-272 1-265 (265)
172 cd05048 PTKc_Ror Catalytic Dom 100.0 9.8E-44 2.1E-48 297.4 24.2 251 16-269 2-279 (283)
173 cd06640 STKc_MST4 Catalytic do 100.0 1E-43 2.2E-48 296.5 24.2 255 19-277 4-261 (277)
174 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-43 2.4E-48 297.0 24.4 257 19-278 1-270 (283)
175 cd06639 STKc_myosinIIIB Cataly 100.0 2.5E-43 5.5E-48 296.1 26.7 253 17-273 20-291 (291)
176 cd06608 STKc_myosinIII_like Ca 100.0 1E-43 2.2E-48 295.6 24.0 251 18-272 5-275 (275)
177 PHA03207 serine/threonine kina 100.0 4.3E-44 9.3E-49 312.5 22.7 252 16-276 89-382 (392)
178 cd06659 STKc_PAK6 Catalytic do 100.0 8E-44 1.7E-48 300.0 23.2 258 19-280 21-282 (297)
179 cd05052 PTKc_Abl Catalytic dom 100.0 2.9E-43 6.3E-48 291.5 26.1 251 14-269 1-258 (263)
180 cd08228 STKc_Nek6 Catalytic do 100.0 2E-43 4.3E-48 293.0 25.1 252 18-269 1-261 (267)
181 cd06647 STKc_PAK_I Catalytic d 100.0 7.7E-44 1.7E-48 299.6 22.8 258 15-276 15-276 (293)
182 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-43 2.7E-48 296.8 23.9 251 20-272 1-284 (284)
183 cd05104 PTKc_Kit Catalytic dom 100.0 7.7E-44 1.7E-48 309.1 23.4 255 13-269 29-370 (375)
184 cd06633 STKc_TAO3 Catalytic do 100.0 3.6E-43 7.8E-48 298.2 26.8 255 21-277 23-281 (313)
185 cd06627 STKc_Cdc7_like Catalyt 100.0 5E-43 1.1E-47 288.2 26.7 251 20-272 1-254 (254)
186 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-43 3.8E-48 295.0 24.2 251 27-277 1-262 (277)
187 PHA03211 serine/threonine kina 100.0 1.6E-43 3.4E-48 312.2 25.1 248 17-274 167-460 (461)
188 cd08215 STKc_Nek Catalytic dom 100.0 4.2E-43 9.1E-48 289.1 26.1 251 20-272 1-258 (258)
189 cd06614 STKc_PAK Catalytic dom 100.0 2.1E-43 4.5E-48 295.9 24.6 255 17-275 17-276 (286)
190 cd05122 PKc_STE Catalytic doma 100.0 5.1E-43 1.1E-47 287.5 26.2 249 20-271 1-253 (253)
191 cd06917 STKc_NAK1_like Catalyt 100.0 1.7E-43 3.8E-48 295.0 23.7 255 19-276 1-262 (277)
192 cd05123 STKc_AGC Catalytic dom 100.0 3.5E-43 7.5E-48 288.7 24.9 244 27-272 1-250 (250)
193 cd05106 PTKc_CSF-1R Catalytic 100.0 1.2E-43 2.6E-48 307.7 23.2 254 13-268 32-367 (374)
194 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.8E-43 1.7E-47 289.1 27.0 253 19-272 2-264 (264)
195 KOG0690 Serine/threonine prote 100.0 4E-45 8.6E-50 292.7 12.6 265 9-275 158-430 (516)
196 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-43 5.8E-48 294.3 23.9 249 26-275 1-261 (279)
197 cd05096 PTKc_DDR1 Catalytic do 100.0 5.3E-43 1.1E-47 296.0 25.8 251 16-268 2-300 (304)
198 cd08219 STKc_Nek3 Catalytic do 100.0 6.5E-43 1.4E-47 288.1 25.2 247 20-269 1-252 (255)
199 PF07714 Pkinase_Tyr: Protein 100.0 6.9E-44 1.5E-48 294.7 19.2 244 22-268 2-257 (259)
200 cd08229 STKc_Nek7 Catalytic do 100.0 4.8E-43 1.1E-47 290.7 24.3 251 18-268 1-260 (267)
201 cd05072 PTKc_Lyn Catalytic dom 100.0 8.2E-43 1.8E-47 288.4 25.3 249 14-268 1-256 (261)
202 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-43 1.6E-47 291.3 25.1 253 21-277 6-261 (277)
203 cd08225 STKc_Nek5 Catalytic do 100.0 8.3E-43 1.8E-47 287.6 25.1 251 20-272 1-257 (257)
204 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-43 2.6E-48 296.0 20.3 254 20-277 5-261 (277)
205 cd07850 STKc_JNK Catalytic dom 100.0 5.8E-43 1.2E-47 301.7 25.1 257 17-277 14-319 (353)
206 cd06635 STKc_TAO1 Catalytic do 100.0 1.1E-42 2.4E-47 295.7 26.4 258 19-278 25-286 (317)
207 cd06638 STKc_myosinIIIA Cataly 100.0 7.6E-43 1.7E-47 292.4 25.0 252 17-272 16-286 (286)
208 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.5E-42 3.3E-47 290.9 26.8 257 19-277 1-274 (287)
209 cd05088 PTKc_Tie2 Catalytic do 100.0 3.5E-43 7.6E-48 296.9 23.1 252 15-269 3-276 (303)
210 cd07834 STKc_MAPK Catalytic do 100.0 2.4E-43 5.3E-48 301.4 22.3 257 20-278 1-298 (330)
211 PHA03390 pk1 serine/threonine- 100.0 5.9E-43 1.3E-47 290.4 24.0 248 18-274 13-267 (267)
212 cd07843 STKc_CDC2L1 Catalytic 100.0 3.5E-43 7.5E-48 295.5 22.8 253 18-272 4-293 (293)
213 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-42 3.1E-47 288.2 26.1 255 15-272 4-268 (268)
214 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-42 2.8E-47 286.5 25.6 246 17-268 2-253 (256)
215 cd06634 STKc_TAO2 Catalytic do 100.0 3.7E-43 8E-48 297.4 22.8 259 19-279 15-277 (308)
216 cd05039 PTKc_Csk_like Catalyti 100.0 2.2E-42 4.8E-47 285.0 26.3 247 15-268 2-251 (256)
217 cd07844 STKc_PCTAIRE_like Cata 100.0 9.3E-43 2E-47 292.6 24.3 253 17-272 3-291 (291)
218 cd08530 STKc_CNK2-like Catalyt 100.0 2E-42 4.4E-47 285.0 25.9 251 20-272 1-256 (256)
219 cd05049 PTKc_Trk Catalytic dom 100.0 1E-42 2.3E-47 290.6 24.3 250 16-268 2-276 (280)
220 cd07868 STKc_CDK8 Catalytic do 100.0 8.9E-43 1.9E-47 296.3 24.3 243 24-272 6-317 (317)
221 cd06657 STKc_PAK4 Catalytic do 100.0 1E-42 2.2E-47 292.5 24.3 253 23-279 24-280 (292)
222 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.3E-42 5E-47 286.5 26.0 250 19-268 2-260 (267)
223 cd07835 STKc_CDK1_like Catalyt 100.0 7.4E-43 1.6E-47 292.1 23.3 250 21-272 1-283 (283)
224 cd07831 STKc_MOK Catalytic dom 100.0 1.5E-42 3.1E-47 290.0 25.0 248 21-272 1-282 (282)
225 PLN00009 cyclin-dependent kina 100.0 1.5E-42 3.3E-47 291.8 25.1 257 18-276 1-291 (294)
226 KOG0596 Dual specificity; seri 100.0 9.5E-44 2.1E-48 301.6 17.6 264 11-278 353-636 (677)
227 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-42 3.5E-47 297.7 25.5 258 17-277 13-306 (343)
228 PTZ00024 cyclin-dependent prot 100.0 9.5E-43 2E-47 298.3 24.0 261 18-279 7-323 (335)
229 cd05068 PTKc_Frk_like Catalyti 100.0 2.7E-42 5.8E-47 285.4 25.8 248 15-268 2-256 (261)
230 cd07851 STKc_p38 Catalytic dom 100.0 9.5E-43 2.1E-47 299.2 23.7 262 14-278 10-307 (343)
231 cd00192 PTKc Catalytic domain 100.0 2.6E-42 5.7E-47 284.9 25.5 242 25-269 1-260 (262)
232 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-42 3.8E-47 291.0 24.8 252 18-272 4-291 (291)
233 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-42 2.7E-47 290.8 23.8 250 20-272 1-284 (284)
234 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-42 4.7E-47 290.1 25.2 249 16-268 2-274 (288)
235 KOG2345 Serine/threonine prote 100.0 4.3E-44 9.3E-49 276.5 13.5 255 12-269 14-296 (302)
236 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2E-42 4.3E-47 285.5 24.4 247 17-269 2-254 (256)
237 cd05089 PTKc_Tie1 Catalytic do 100.0 2.6E-42 5.7E-47 290.8 25.2 248 19-269 2-271 (297)
238 cd05606 STKc_beta_ARK Catalyti 100.0 2.1E-42 4.6E-47 288.7 24.1 248 26-275 1-261 (278)
239 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-42 5.2E-47 290.7 24.6 253 19-273 1-295 (295)
240 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-42 3.2E-47 286.9 22.9 248 16-268 3-256 (261)
241 KOG0586 Serine/threonine prote 100.0 1.5E-43 3.2E-48 304.4 17.3 262 13-277 50-314 (596)
242 cd05032 PTKc_InsR_like Catalyt 100.0 3E-42 6.6E-47 287.4 24.8 253 14-269 1-274 (277)
243 cd05061 PTKc_InsR Catalytic do 100.0 5.6E-42 1.2E-46 287.6 26.5 259 14-275 1-286 (288)
244 cd05090 PTKc_Ror1 Catalytic do 100.0 3.7E-42 7.9E-47 287.9 25.3 251 16-269 2-279 (283)
245 KOG0194 Protein tyrosine kinas 100.0 2.8E-43 6E-48 303.1 18.7 256 13-268 151-415 (474)
246 KOG0607 MAP kinase-interacting 100.0 1.4E-43 3.1E-48 283.0 15.7 252 24-278 83-370 (463)
247 cd07855 STKc_ERK5 Catalytic do 100.0 6.6E-43 1.4E-47 299.1 20.9 259 19-279 5-304 (334)
248 KOG0579 Ste20-like serine/thre 100.0 3.9E-44 8.5E-49 308.5 13.2 253 21-276 34-296 (1187)
249 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-42 2.9E-47 297.6 22.7 259 18-278 4-300 (337)
250 cd05033 PTKc_EphR Catalytic do 100.0 6.6E-42 1.4E-46 283.8 26.0 250 17-269 2-261 (266)
251 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.7E-42 8.1E-47 287.0 24.6 251 16-269 3-274 (277)
252 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-42 1.1E-46 282.2 25.1 241 25-268 1-248 (252)
253 PRK13184 pknD serine/threonine 100.0 3.3E-42 7.2E-47 317.7 26.4 252 18-269 1-285 (932)
254 cd05082 PTKc_Csk Catalytic dom 100.0 5.7E-42 1.2E-46 282.7 25.1 246 15-268 2-251 (256)
255 cd05062 PTKc_IGF-1R Catalytic 100.0 5.9E-42 1.3E-46 285.8 25.5 252 15-269 2-274 (277)
256 cd07865 STKc_CDK9 Catalytic do 100.0 2.4E-42 5.2E-47 292.5 23.4 254 17-272 10-310 (310)
257 cd05054 PTKc_VEGFR Catalytic d 100.0 2E-42 4.3E-47 296.3 23.0 254 14-269 2-329 (337)
258 cd06616 PKc_MKK4 Catalytic dom 100.0 2.4E-42 5.3E-47 289.7 23.1 256 18-276 3-274 (288)
259 cd05094 PTKc_TrkC Catalytic do 100.0 5.5E-42 1.2E-46 288.0 25.2 250 16-269 2-278 (291)
260 cd05059 PTKc_Tec_like Catalyti 100.0 3.6E-42 7.8E-47 283.9 23.6 247 17-269 2-254 (256)
261 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-42 8.3E-47 299.8 25.0 255 12-268 30-392 (400)
262 KOG0193 Serine/threonine prote 100.0 5.5E-44 1.2E-48 306.1 13.1 253 11-268 384-648 (678)
263 cd05071 PTKc_Src Catalytic dom 100.0 6.7E-42 1.5E-46 283.3 25.2 248 15-269 2-256 (262)
264 KOG1026 Nerve growth factor re 100.0 1.7E-43 3.7E-48 314.4 16.6 256 9-267 476-756 (774)
265 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7.6E-42 1.6E-46 291.7 26.0 261 17-280 8-299 (328)
266 cd07849 STKc_ERK1_2_like Catal 100.0 3.2E-42 6.9E-47 295.2 23.7 257 18-278 4-301 (336)
267 cd07840 STKc_CDK9_like Catalyt 100.0 3.8E-42 8.2E-47 288.0 23.5 250 21-272 1-287 (287)
268 cd07842 STKc_CDK8_like Catalyt 100.0 2.3E-42 5E-47 293.4 22.5 252 20-272 1-316 (316)
269 KOG1989 ARK protein kinase fam 100.0 5.6E-43 1.2E-47 312.2 19.4 255 12-273 30-311 (738)
270 cd05108 PTKc_EGFR Catalytic do 100.0 5.4E-42 1.2E-46 291.3 24.7 251 15-269 3-264 (316)
271 cd05034 PTKc_Src_like Catalyti 100.0 9.3E-42 2E-46 282.1 25.5 248 15-268 2-256 (261)
272 KOG0612 Rho-associated, coiled 100.0 1.6E-43 3.5E-48 321.0 15.8 267 9-276 65-345 (1317)
273 KOG4721 Serine/threonine prote 100.0 7.4E-44 1.6E-48 303.4 12.8 250 8-269 113-364 (904)
274 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.4E-42 1.6E-46 293.8 24.9 259 17-278 15-309 (345)
275 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-41 2.4E-46 281.1 25.0 241 25-268 1-250 (257)
276 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-41 2.8E-46 280.6 25.3 242 25-269 1-254 (257)
277 cd05092 PTKc_TrkA Catalytic do 100.0 8.5E-42 1.8E-46 285.4 24.5 249 16-268 2-276 (280)
278 cd05055 PTKc_PDGFR Catalytic d 100.0 1.2E-41 2.7E-46 287.3 25.7 254 13-268 29-296 (302)
279 cd07879 STKc_p38delta_MAPK13 C 100.0 4.9E-42 1.1E-46 294.7 23.5 255 19-277 15-305 (342)
280 cd07867 STKc_CDC2L6 Catalytic 100.0 7.4E-42 1.6E-46 290.6 24.4 243 24-272 6-317 (317)
281 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.4E-42 2E-46 282.0 24.3 247 15-268 2-255 (260)
282 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-41 2.3E-46 286.9 24.9 251 16-268 2-292 (296)
283 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.5E-42 1.4E-46 293.9 23.8 256 18-278 4-309 (342)
284 cd07864 STKc_CDK12 Catalytic d 100.0 4.3E-42 9.3E-47 290.0 22.4 257 14-272 2-302 (302)
285 cd05613 STKc_MSK1_N N-terminal 100.0 1.1E-41 2.4E-46 286.0 24.6 255 20-276 1-275 (290)
286 cd05118 STKc_CMGC Catalytic do 100.0 4.5E-42 9.7E-47 287.1 22.1 250 21-272 1-283 (283)
287 cd05091 PTKc_Ror2 Catalytic do 100.0 7E-42 1.5E-46 286.2 23.2 252 15-269 1-279 (283)
288 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-41 2.7E-46 281.3 24.4 247 15-268 2-255 (260)
289 cd05060 PTKc_Syk_like Catalyti 100.0 1.9E-41 4.1E-46 279.7 25.4 240 25-268 1-250 (257)
290 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-41 3.2E-46 286.1 24.8 261 12-275 8-279 (296)
291 PHA03210 serine/threonine kina 100.0 3E-42 6.6E-47 308.8 21.8 259 17-276 146-461 (501)
292 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-41 3E-46 283.2 24.2 250 18-269 4-272 (275)
293 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.6E-41 3.5E-46 287.3 24.9 254 13-269 12-295 (307)
294 cd05069 PTKc_Yes Catalytic dom 100.0 2.6E-41 5.7E-46 279.4 25.5 247 15-268 2-255 (260)
295 cd05066 PTKc_EphR_A Catalytic 100.0 2.2E-41 4.8E-46 280.9 25.1 249 17-268 2-261 (267)
296 cd05053 PTKc_FGFR Catalytic do 100.0 1.1E-41 2.5E-46 286.3 23.6 254 13-269 6-287 (293)
297 cd07829 STKc_CDK_like Catalyti 100.0 6.9E-42 1.5E-46 285.8 22.2 250 21-272 1-282 (282)
298 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.5E-41 7.5E-46 279.8 25.9 250 16-268 2-262 (268)
299 cd05097 PTKc_DDR_like Catalyti 100.0 1.8E-41 3.9E-46 285.5 24.4 251 16-268 2-291 (295)
300 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-41 3.5E-46 284.3 23.7 250 21-272 1-287 (287)
301 cd08226 PK_STRAD_beta Pseudoki 100.0 8.1E-42 1.8E-46 291.7 22.2 253 25-278 4-317 (328)
302 cd05065 PTKc_EphR_B Catalytic 100.0 3.4E-41 7.3E-46 280.0 25.0 250 17-269 2-264 (269)
303 cd07852 STKc_MAPK15 Catalytic 100.0 8.7E-42 1.9E-46 292.6 22.1 259 17-278 5-304 (337)
304 cd05083 PTKc_Chk Catalytic dom 100.0 2.7E-41 5.9E-46 278.3 24.1 244 17-269 4-250 (254)
305 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-41 3.3E-46 280.7 22.6 251 20-272 1-260 (260)
306 cd05109 PTKc_HER2 Catalytic do 100.0 4.8E-41 1E-45 280.6 25.8 250 15-268 3-263 (279)
307 smart00219 TyrKc Tyrosine kina 100.0 3.8E-41 8.3E-46 277.6 24.8 245 21-268 1-256 (258)
308 KOG0577 Serine/threonine prote 100.0 4.5E-43 9.7E-48 299.8 13.5 253 21-275 28-284 (948)
309 cd07830 STKc_MAK_like Catalyti 100.0 4E-41 8.7E-46 281.5 25.0 249 21-272 1-283 (283)
310 cd05045 PTKc_RET Catalytic dom 100.0 4.5E-41 9.8E-46 282.3 25.4 246 20-268 1-281 (290)
311 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.9E-41 1.1E-45 284.0 25.3 254 13-269 9-292 (304)
312 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-41 3E-46 288.0 21.8 254 17-272 6-311 (311)
313 KOG0983 Mitogen-activated prot 100.0 1.1E-42 2.4E-47 272.5 13.7 261 11-274 84-354 (391)
314 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.3E-41 1.1E-45 280.9 24.9 247 19-268 3-276 (283)
315 cd05050 PTKc_Musk Catalytic do 100.0 4.9E-41 1.1E-45 281.8 24.7 250 16-268 2-284 (288)
316 cd05583 STKc_MSK_N N-terminal 100.0 7.1E-41 1.5E-45 280.8 25.6 254 20-275 1-272 (288)
317 cd05112 PTKc_Itk Catalytic dom 100.0 8.3E-41 1.8E-45 275.6 25.5 247 17-269 2-254 (256)
318 cd07857 STKc_MPK1 Catalytic do 100.0 5.5E-41 1.2E-45 287.1 25.2 257 20-278 1-301 (332)
319 cd05035 PTKc_Axl_like Catalyti 100.0 5.5E-41 1.2E-45 279.1 24.4 247 21-269 1-268 (273)
320 KOG1187 Serine/threonine prote 100.0 8E-42 1.7E-46 291.6 19.8 247 19-269 75-348 (361)
321 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.2E-41 9.1E-46 293.2 24.3 257 11-269 29-395 (401)
322 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.3E-41 1.6E-45 286.5 25.3 254 13-269 6-289 (334)
323 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-40 3E-45 277.8 26.4 250 15-268 3-263 (279)
324 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.5E-41 9.8E-46 288.7 23.9 254 14-269 2-335 (343)
325 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-40 3.6E-45 274.6 26.4 248 14-268 1-255 (260)
326 cd05576 STKc_RPK118_like Catal 100.0 2.3E-41 5E-46 276.0 21.0 229 30-272 4-237 (237)
327 cd05075 PTKc_Axl Catalytic dom 100.0 8.5E-41 1.8E-45 278.0 24.6 247 21-269 1-267 (272)
328 KOG0604 MAP kinase-activated p 100.0 1.7E-42 3.7E-47 274.5 13.5 251 17-275 59-328 (400)
329 KOG0574 STE20-like serine/thre 100.0 2.5E-44 5.5E-49 285.5 3.1 251 21-276 35-290 (502)
330 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-40 3.3E-45 277.7 25.9 251 15-269 3-264 (279)
331 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-40 2.4E-45 283.0 25.3 253 14-269 7-289 (314)
332 cd05056 PTKc_FAK Catalytic dom 100.0 1.7E-40 3.7E-45 275.9 26.0 251 15-269 2-261 (270)
333 cd05041 PTKc_Fes_like Catalyti 100.0 1.5E-40 3.3E-45 273.2 25.2 240 25-268 1-247 (251)
334 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.5E-41 1.8E-45 279.9 23.7 248 20-269 5-279 (284)
335 KOG4279 Serine/threonine prote 100.0 2.1E-42 4.6E-47 300.4 14.3 247 26-275 582-838 (1226)
336 cd05047 PTKc_Tie Catalytic dom 100.0 1E-40 2.2E-45 277.4 23.8 242 25-269 1-264 (270)
337 KOG0584 Serine/threonine prote 100.0 5.4E-42 1.2E-46 295.2 16.5 253 21-275 42-302 (632)
338 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-40 2.8E-45 280.4 24.6 249 18-268 4-292 (296)
339 cd08216 PK_STRAD Pseudokinase 100.0 8.3E-41 1.8E-45 283.8 23.6 247 31-278 12-304 (314)
340 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-40 2.9E-45 306.9 26.5 149 18-166 3-151 (669)
341 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-40 4.2E-45 277.1 24.9 251 15-268 2-271 (280)
342 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-40 7.3E-45 271.1 25.8 241 25-269 1-247 (250)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 1.6E-43 3.5E-48 324.6 6.6 257 19-276 1235-1501(1509)
344 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.7E-40 5.8E-45 276.8 25.4 249 18-269 3-279 (284)
345 cd05115 PTKc_Zap-70 Catalytic 100.0 3.6E-40 7.8E-45 272.2 25.5 240 26-269 2-251 (257)
346 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.9E-40 4.2E-45 277.4 23.1 250 17-268 2-278 (284)
347 KOG4236 Serine/threonine prote 100.0 1.5E-42 3.3E-47 293.2 10.3 249 24-276 569-826 (888)
348 KOG0662 Cyclin-dependent kinas 100.0 1.6E-41 3.5E-46 251.1 14.1 255 19-275 2-289 (292)
349 KOG0614 cGMP-dependent protein 100.0 2.3E-42 5E-47 290.7 10.9 265 10-274 411-682 (732)
350 cd08528 STKc_Nek10 Catalytic d 100.0 4.4E-40 9.6E-45 273.3 24.1 250 20-269 1-266 (269)
351 KOG0986 G protein-coupled rece 100.0 2.2E-41 4.7E-46 281.4 15.2 260 14-275 180-452 (591)
352 KOG1095 Protein tyrosine kinas 100.0 1.5E-40 3.2E-45 305.4 22.0 251 15-268 688-956 (1025)
353 KOG0666 Cyclin C-dependent kin 100.0 1.2E-41 2.6E-46 271.0 12.7 261 17-279 22-347 (438)
354 KOG0603 Ribosomal protein S6 k 100.0 4E-41 8.7E-46 290.8 16.6 244 17-272 320-566 (612)
355 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-39 2.7E-44 275.3 25.2 251 15-269 3-264 (303)
356 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-39 2.6E-44 271.6 24.4 238 25-269 1-272 (274)
357 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.1E-39 2.4E-44 269.2 23.7 235 25-268 1-256 (259)
358 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.8E-40 1E-44 271.5 21.1 238 25-269 1-256 (258)
359 cd05044 PTKc_c-ros Catalytic d 100.0 1.2E-39 2.6E-44 270.7 22.6 241 25-268 1-265 (269)
360 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.8E-39 6E-44 267.6 24.5 238 25-269 1-260 (262)
361 cd05042 PTKc_Aatyk Catalytic d 100.0 3.4E-39 7.4E-44 268.0 24.6 242 25-269 1-266 (269)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 4.3E-39 9.3E-44 266.3 25.0 242 25-269 1-255 (262)
363 KOG0669 Cyclin T-dependent kin 100.0 8.1E-42 1.8E-46 264.9 7.0 271 8-280 6-326 (376)
364 smart00220 S_TKc Serine/Threon 100.0 5.1E-39 1.1E-43 262.0 23.7 240 31-272 1-244 (244)
365 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.9E-39 2.1E-43 265.3 24.7 241 25-268 1-265 (269)
366 KOG0671 LAMMER dual specificit 100.0 8.5E-41 1.8E-45 272.6 11.8 256 16-276 86-413 (415)
367 PHA02882 putative serine/threo 100.0 1.3E-38 2.8E-43 267.9 25.3 252 13-268 6-291 (294)
368 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-38 2.7E-43 265.0 23.6 247 21-269 1-268 (273)
369 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.2E-38 6.9E-43 262.1 24.6 241 25-268 1-264 (268)
370 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-39 2.3E-44 298.2 16.7 250 18-273 478-875 (1351)
371 KOG0696 Serine/threonine prote 100.0 7.4E-40 1.6E-44 269.9 11.9 261 14-276 344-613 (683)
372 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-39 6.8E-44 283.6 12.3 254 13-269 623-887 (996)
373 KOG1151 Tousled-like protein k 100.0 6.7E-39 1.5E-43 266.4 12.2 256 19-274 463-746 (775)
374 PLN03225 Serine/threonine-prot 100.0 2.1E-37 4.6E-42 279.5 22.5 255 13-276 126-457 (566)
375 KOG0608 Warts/lats-like serine 100.0 7.5E-38 1.6E-42 269.7 17.5 268 7-275 615-934 (1034)
376 KOG0199 ACK and related non-re 100.0 3.6E-38 7.7E-43 274.2 14.8 257 19-279 110-378 (1039)
377 PLN03224 probable serine/threo 100.0 1.4E-36 3E-41 268.2 24.8 262 13-274 139-505 (507)
378 KOG1290 Serine/threonine prote 100.0 2.8E-37 6.1E-42 258.9 19.2 133 16-153 75-222 (590)
379 KOG4257 Focal adhesion tyrosin 100.0 9.7E-38 2.1E-42 268.6 16.4 251 14-268 384-644 (974)
380 KOG4278 Protein tyrosine kinas 100.0 2.7E-37 5.8E-42 266.0 19.0 249 15-268 263-518 (1157)
381 KOG0695 Serine/threonine prote 100.0 8.8E-38 1.9E-42 251.8 14.6 262 12-275 243-522 (593)
382 KOG1094 Discoidin domain recep 100.0 1.7E-37 3.7E-42 265.2 16.3 254 11-267 530-798 (807)
383 KOG0670 U4/U6-associated splic 100.0 2.1E-38 4.6E-43 267.5 10.3 257 13-274 426-751 (752)
384 KOG1006 Mitogen-activated prot 100.0 1.3E-38 2.8E-43 248.7 7.6 265 11-278 56-336 (361)
385 KOG0587 Traf2- and Nck-interac 100.0 3.7E-36 8E-41 267.4 19.2 254 19-276 19-289 (953)
386 KOG0668 Casein kinase II, alph 100.0 1.4E-36 3E-41 232.8 13.0 250 17-275 36-328 (338)
387 KOG0664 Nemo-like MAPK-related 100.0 1.5E-37 3.3E-42 243.9 6.7 263 18-282 52-356 (449)
388 KOG4250 TANK binding protein k 100.0 2.2E-36 4.8E-41 263.9 13.0 239 21-261 15-296 (732)
389 PLN00113 leucine-rich repeat r 100.0 3.9E-35 8.5E-40 282.9 19.2 239 19-269 690-947 (968)
390 KOG0200 Fibroblast/platelet-de 100.0 2.7E-34 5.8E-39 261.7 23.1 253 13-268 290-574 (609)
391 KOG0665 Jun-N-terminal kinase 100.0 1.1E-35 2.4E-40 237.7 11.0 255 14-273 12-314 (369)
392 cd00180 PKc Catalytic domain o 100.0 4.4E-33 9.5E-38 221.8 22.1 209 27-270 1-215 (215)
393 KOG1025 Epidermal growth facto 100.0 2.6E-34 5.7E-39 254.0 15.4 244 21-268 698-952 (1177)
394 KOG1027 Serine/threonine prote 100.0 5.9E-35 1.3E-39 258.6 10.6 244 21-275 511-773 (903)
395 KOG1152 Signal transduction se 100.0 3.7E-34 8.1E-39 244.5 11.2 202 16-217 558-770 (772)
396 KOG2052 Activin A type IB rece 100.0 2.4E-32 5.3E-37 227.1 17.8 242 17-267 209-497 (513)
397 KOG3653 Transforming growth fa 100.0 1.3E-32 2.8E-37 230.2 16.0 239 18-265 209-495 (534)
398 smart00221 STYKc Protein kinas 100.0 2.5E-31 5.4E-36 214.4 22.0 209 21-231 1-217 (225)
399 KOG1167 Serine/threonine prote 100.0 5.3E-33 1.1E-37 229.8 10.9 259 10-276 27-388 (418)
400 KOG0576 Mitogen-activated prot 100.0 1.1E-33 2.4E-38 245.1 5.8 256 19-277 15-279 (829)
401 KOG0984 Mitogen-activated prot 100.0 4.6E-32 1E-36 204.8 12.6 215 14-231 41-268 (282)
402 KOG1024 Receptor-like protein 100.0 3.7E-31 8E-36 217.1 17.2 251 15-268 280-550 (563)
403 KOG1345 Serine/threonine kinas 100.0 2.1E-31 4.6E-36 209.0 9.4 250 18-272 23-290 (378)
404 PLN00181 protein SPA1-RELATED; 100.0 6.4E-31 1.4E-35 248.0 12.2 194 79-276 33-272 (793)
405 smart00750 KIND kinase non-cat 100.0 1.3E-29 2.7E-34 197.3 12.4 162 104-275 1-171 (176)
406 KOG0590 Checkpoint kinase and 99.9 1.9E-28 4.2E-33 221.1 7.5 256 22-278 321-594 (601)
407 KOG1164 Casein kinase (serine/ 99.9 2.2E-26 4.7E-31 195.6 19.5 246 20-269 19-293 (322)
408 KOG1163 Casein kinase (serine/ 99.9 7.2E-27 1.6E-31 180.8 14.2 249 10-264 6-275 (341)
409 KOG1165 Casein kinase (serine/ 99.9 2.7E-26 5.9E-31 185.1 15.8 245 16-266 25-292 (449)
410 PF14531 Kinase-like: Kinase-l 99.9 3.6E-27 7.9E-32 192.5 8.4 235 19-260 12-288 (288)
411 COG0515 SPS1 Serine/threonine 99.9 2.6E-24 5.7E-29 182.6 25.8 253 21-276 2-282 (384)
412 PRK09188 serine/threonine prot 99.9 4.5E-25 9.7E-30 187.7 15.7 167 14-190 13-194 (365)
413 KOG1240 Protein kinase contain 99.9 2.6E-27 5.7E-32 215.7 1.8 237 20-269 24-291 (1431)
414 PRK10359 lipopolysaccharide co 99.9 5.6E-25 1.2E-29 174.6 11.3 176 15-210 27-216 (232)
415 KOG0195 Integrin-linked kinase 99.9 5.5E-25 1.2E-29 173.4 8.6 251 10-267 181-440 (448)
416 KOG0603 Ribosomal protein S6 k 99.9 2.7E-25 5.8E-30 193.0 3.4 240 26-275 1-249 (612)
417 cd05147 RIO1_euk RIO kinase fa 99.9 8.3E-24 1.8E-28 165.8 11.0 142 24-169 2-167 (190)
418 cd05145 RIO1_like RIO kinase f 99.9 2.8E-22 6.1E-27 157.6 15.0 143 23-169 1-167 (190)
419 KOG0606 Microtubule-associated 99.9 3.2E-23 6.9E-28 188.9 10.7 220 17-276 81-322 (1205)
420 KOG4158 BRPK/PTEN-induced prot 99.9 2.1E-23 4.5E-28 172.4 7.5 252 11-264 149-505 (598)
421 KOG1166 Mitotic checkpoint ser 99.9 3.8E-22 8.3E-27 184.5 10.8 199 12-214 691-901 (974)
422 PRK12274 serine/threonine prot 99.9 5.5E-21 1.2E-25 148.9 15.6 185 21-218 4-209 (218)
423 KOG1023 Natriuretic peptide re 99.8 1.6E-20 3.4E-25 163.0 12.6 195 74-268 2-219 (484)
424 smart00090 RIO RIO-like kinase 99.8 2.2E-20 4.7E-25 151.3 12.3 150 15-169 24-198 (237)
425 PRK14879 serine/threonine prot 99.8 8E-19 1.7E-23 140.5 18.2 138 24-168 1-143 (211)
426 PRK10345 hypothetical protein; 99.8 1.6E-19 3.5E-24 143.0 12.6 135 21-164 4-154 (210)
427 KOG1033 eIF-2alpha kinase PEK/ 99.8 5.2E-20 1.1E-24 157.4 4.7 174 93-273 330-516 (516)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 2.8E-18 6.1E-23 136.1 13.5 133 26-168 1-138 (199)
429 cd05144 RIO2_C RIO kinase fami 99.8 2.8E-18 6E-23 136.0 11.4 138 21-169 17-175 (198)
430 PRK09605 bifunctional UGMP fam 99.8 1.2E-17 2.6E-22 151.3 14.8 138 20-168 334-476 (535)
431 KOG0590 Checkpoint kinase and 99.7 8.8E-20 1.9E-24 165.1 -1.6 257 17-274 18-291 (601)
432 cd05119 RIO RIO kinase family, 99.7 4E-17 8.8E-22 128.1 11.8 139 23-169 1-164 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.7 2.5E-16 5.5E-21 127.9 13.8 137 25-168 37-191 (239)
434 cd05120 APH_ChoK_like Aminogly 99.7 4.7E-16 1E-20 117.3 10.6 131 23-167 2-137 (155)
435 KOG1243 Protein kinase [Genera 99.7 4.5E-15 9.7E-20 131.0 16.2 166 37-212 30-199 (690)
436 KOG0601 Cyclin-dependent kinas 99.6 1.6E-16 3.5E-21 138.4 5.0 258 14-275 109-385 (524)
437 KOG1266 Protein kinase [Signal 99.6 1E-15 2.3E-20 124.2 8.0 202 68-274 116-336 (458)
438 KOG0606 Microtubule-associated 99.6 2.4E-16 5.1E-21 144.6 4.0 263 14-276 799-1099(1205)
439 cd05146 RIO3_euk RIO kinase fa 99.6 3.1E-14 6.7E-19 110.9 12.9 143 24-171 2-176 (197)
440 PRK04750 ubiB putative ubiquin 99.6 1.3E-14 2.9E-19 129.2 9.7 154 11-169 112-314 (537)
441 COG3642 Mn2+-dependent serine/ 99.5 2.2E-13 4.8E-18 102.8 13.6 135 25-169 2-141 (204)
442 TIGR01982 UbiB 2-polyprenylphe 99.5 1E-13 2.2E-18 122.0 12.4 149 16-169 115-307 (437)
443 KOG0601 Cyclin-dependent kinas 99.5 2.8E-14 6.1E-19 124.5 6.4 254 14-273 260-518 (524)
444 KOG3087 Serine/threonine prote 99.5 1.9E-12 4.1E-17 97.5 13.6 145 23-169 11-166 (229)
445 cd05151 ChoK Choline Kinase (C 99.5 3.5E-13 7.6E-18 103.9 8.9 127 24-167 3-135 (170)
446 COG4248 Uncharacterized protei 99.4 2.4E-11 5.1E-16 102.6 15.0 234 23-265 15-292 (637)
447 KOG3741 Poly(A) ribonuclease s 99.3 6.6E-11 1.4E-15 102.2 16.2 212 31-269 288-521 (655)
448 KOG2137 Protein kinase [Signal 99.3 5.3E-13 1.1E-17 118.5 3.2 149 127-275 107-271 (700)
449 cd05154 ACAD10_11_like Acyl-Co 99.3 3.7E-11 8E-16 96.7 10.0 139 25-167 4-205 (223)
450 PF01163 RIO1: RIO1 family; I 99.3 1.1E-10 2.5E-15 90.6 12.2 129 35-171 2-158 (188)
451 COG0478 RIO-like serine/threon 99.2 9.4E-11 2E-15 94.0 10.6 142 21-172 93-255 (304)
452 PRK15123 lipopolysaccharide co 99.2 5.7E-10 1.2E-14 91.8 14.9 135 31-167 34-193 (268)
453 PF06176 WaaY: Lipopolysacchar 99.1 2.3E-09 4.9E-14 84.3 12.6 144 12-166 24-181 (229)
454 PF06293 Kdo: Lipopolysacchari 99.1 2.7E-09 5.8E-14 84.9 11.7 104 64-167 56-169 (206)
455 COG1718 RIO1 Serine/threonine 99.0 7.3E-09 1.6E-13 82.4 12.2 143 24-172 53-219 (268)
456 PRK09902 hypothetical protein; 99.0 6.8E-09 1.5E-13 81.3 11.5 136 28-166 27-177 (216)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 3.2E-07 7E-12 73.9 12.0 132 25-166 7-180 (226)
458 KOG1035 eIF-2alpha kinase GCN2 98.7 3.4E-07 7.3E-12 86.7 13.5 204 63-277 226-442 (1351)
459 COG0661 AarF Predicted unusual 98.7 2.7E-07 5.9E-12 82.4 12.3 141 25-169 131-315 (517)
460 KOG1235 Predicted unusual prot 98.4 2.8E-06 6E-11 75.9 11.6 139 24-168 166-354 (538)
461 cd05150 APH Aminoglycoside 3'- 98.4 3.8E-06 8.2E-11 68.7 11.4 74 27-108 6-81 (244)
462 PF01636 APH: Phosphotransfera 98.4 1.2E-05 2.7E-10 64.9 14.4 78 24-108 2-84 (239)
463 PF12260 PIP49_C: Protein-kina 98.4 1E-05 2.2E-10 63.2 12.6 95 68-166 8-109 (188)
464 COG2112 Predicted Ser/Thr prot 98.3 1.2E-05 2.6E-10 60.9 10.0 131 22-170 25-157 (201)
465 PLN02876 acyl-CoA dehydrogenas 98.3 1.6E-05 3.4E-10 76.2 12.9 81 23-105 42-130 (822)
466 KOG2268 Serine/threonine prote 98.2 1.1E-06 2.3E-11 72.8 4.3 138 20-168 93-251 (465)
467 KOG2270 Serine/threonine prote 98.2 2.4E-05 5.2E-10 66.1 10.9 146 22-171 147-316 (520)
468 cd05155 APH_ChoK_like_1 Unchar 98.1 2.7E-05 5.8E-10 63.3 9.6 29 138-166 164-192 (235)
469 KOG0576 Mitogen-activated prot 98.1 6.8E-07 1.5E-11 79.8 -0.1 241 20-279 243-494 (829)
470 cd05157 ETNK_euk Ethanolamine 98.1 6.4E-05 1.4E-09 61.0 11.1 75 24-106 3-79 (235)
471 cd05153 HomoserineK_II Homoser 97.9 0.00028 6.1E-09 59.4 12.7 136 23-166 18-203 (296)
472 PF13095 FTA2: Kinetochore Sim 97.9 0.00024 5.3E-09 55.6 11.0 128 19-166 37-206 (207)
473 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00045 9.8E-09 54.3 12.7 131 24-162 6-165 (199)
474 TIGR02721 ycfN_thiK thiamine k 97.9 6E-05 1.3E-09 62.1 8.1 132 26-167 3-174 (256)
475 PRK09550 mtnK methylthioribose 97.8 0.0011 2.3E-08 57.9 14.2 82 22-105 29-117 (401)
476 KOG1093 Predicted protein kina 97.8 0.00011 2.4E-09 64.7 8.0 162 65-275 28-200 (725)
477 cd05156 ChoK_euk Choline Kinas 97.8 0.00022 4.9E-09 60.2 9.6 76 24-107 3-85 (302)
478 PRK05231 homoserine kinase; Pr 97.7 0.0017 3.7E-08 55.3 13.6 29 138-166 187-215 (319)
479 TIGR00938 thrB_alt homoserine 97.6 0.0021 4.5E-08 54.5 12.7 143 17-166 20-215 (307)
480 TIGR01767 MTRK 5-methylthiorib 97.3 0.0028 6.1E-08 54.3 10.5 76 26-103 2-84 (370)
481 COG3173 Predicted aminoglycosi 97.3 0.0029 6.3E-08 53.4 10.2 147 19-169 25-229 (321)
482 PLN02756 S-methyl-5-thioribose 97.2 0.0064 1.4E-07 53.1 11.0 76 23-103 36-119 (418)
483 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.0068 1.5E-07 50.5 10.1 29 139-167 186-215 (276)
484 COG5072 ALK1 Serine/threonine 97.1 0.0062 1.3E-07 51.9 9.6 108 90-206 297-405 (488)
485 TIGR02904 spore_ysxE spore coa 97.0 0.023 5E-07 48.2 13.3 29 139-167 197-225 (309)
486 PLN02421 phosphotransferase, a 97.0 0.0059 1.3E-07 52.3 9.2 28 140-167 184-212 (330)
487 COG3001 Uncharacterized protei 97.0 0.0074 1.6E-07 48.1 8.7 78 22-107 19-99 (286)
488 KOG1826 Ras GTPase activating 96.9 0.00016 3.4E-09 71.2 -0.6 262 12-276 1222-1499(2724)
489 PF03881 Fructosamin_kin: Fruc 96.9 0.0058 1.3E-07 51.1 8.5 75 22-104 20-97 (288)
490 PRK12396 5-methylribose kinase 96.9 0.01 2.2E-07 51.6 9.6 79 23-103 33-117 (409)
491 PLN02236 choline kinase 96.8 0.0074 1.6E-07 52.0 8.4 139 21-167 38-230 (344)
492 PRK11768 serine/threonine prot 96.5 0.066 1.4E-06 45.8 12.1 27 138-166 196-222 (325)
493 PRK10593 hypothetical protein; 96.4 0.026 5.7E-07 47.6 9.0 106 20-137 15-126 (297)
494 PTZ00384 choline kinase; Provi 96.0 0.029 6.2E-07 49.0 7.2 29 138-167 227-255 (383)
495 PTZ00296 choline kinase; Provi 95.8 0.096 2.1E-06 46.7 9.9 28 139-167 285-312 (442)
496 PF07387 Seadorna_VP7: Seadorn 95.8 0.05 1.1E-06 43.3 7.1 115 30-165 73-189 (308)
497 KOG2269 Serine/threonine prote 95.6 0.0083 1.8E-07 50.4 2.5 75 94-169 358-433 (531)
498 COG0510 ycfN Thiamine kinase a 95.5 0.024 5.3E-07 47.0 5.0 44 124-167 137-182 (269)
499 TIGR02906 spore_CotS spore coa 95.2 0.05 1.1E-06 46.0 5.9 28 138-166 187-214 (313)
500 PRK10271 thiK thiamine kinase; 95.1 0.019 4.1E-07 44.6 2.7 27 140-167 79-105 (188)
No 1
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-58 Score=392.79 Aligned_cols=259 Identities=38% Similarity=0.747 Sum_probs=246.7
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|...+.||.|||+.+|.+++..+|..||+|++.+.........+.+.+|+++-+.|+|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 56999999999999999999999999999999999988887788899999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~ 175 (284)
|.|+.++|.+++++.+++++.+++.+++||+.|+.|||+++|+|+|||..|++++.+-+|||+|||++.... +....
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T 177 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT 177 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence 999999999999999999999999999999999999999999999999999999999999999999996654 56677
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.+|||-|.|||++....++..+||||+||+||-|++|++||+..+-.+++..+......+|. .++.++++||+++|++
T Consensus 178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~ 255 (592)
T KOG0575|consen 178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRP 255 (592)
T ss_pred ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999999999999999998877777 8999999999999999
Q ss_pred CCCCCCCHHhhhcCccccccCCCC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
||.+|||++++|.|+||.++-.|.
T Consensus 256 ~P~~Rpsl~~vL~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 256 NPSERPSLDEVLDHPFFKSGFTPA 279 (592)
T ss_pred CcccCCCHHHHhcCHhhhCCCcCC
Confidence 999999999999999998876654
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-58 Score=379.60 Aligned_cols=260 Identities=35% Similarity=0.574 Sum_probs=230.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH----HHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY----KIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~----~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
...-|.+.+.||+|+||.|-+|..+.+++.||||++.+...... .....+++|+++|++++||||++++++|..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 34458888999999999999999999999999999987655431 12345679999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC---CCEEEeeccccccc
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE---GRLKIGDFGWSVQS 169 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~---~~~~l~d~~~~~~~ 169 (284)
..|+|+||++||.|.+.+-.++.+.++.-+.++.|++.|+.|||+.||+|+||||+|||+..+ ..+||+|||++...
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999876 78999999999777
Q ss_pred C--CCCccccCCCcccCccccCCCCC--C-chhhHhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCCC--CCCCC
Q 023270 170 R--SKRHTMCGTLDYLAPEMVENKEH--D-YAVDNWTLGILCYEFLYGAPPFEAESQKD-TFRRIMKVDLSFP--SAPSI 241 (284)
Q Consensus 170 ~--~~~~~~~~~~~y~aPE~~~~~~~--~-~~~Di~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~--~~~~~ 241 (284)
+ +-....+|||.|.|||++.+... . .+.|+||+||++|-+++|.+||....... ..+++.++.+.+. .+..+
T Consensus 330 g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~I 409 (475)
T KOG0615|consen 330 GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRI 409 (475)
T ss_pred ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhh
Confidence 4 44467789999999999987653 3 47899999999999999999998776655 8888888766554 45689
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+.+..+||++||..||++|||++++|+||||+..+
T Consensus 410 seea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 410 SEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 99999999999999999999999999999999764
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-57 Score=369.60 Aligned_cols=265 Identities=32% Similarity=0.478 Sum_probs=236.8
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
...+...+.+.++.||+|..|+|++|.++.+++.+|+|++... ......+++.+|+++++..+||||+.+++.|..++
T Consensus 73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG 150 (364)
T ss_pred ccccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence 3456777999999999999999999999999999999999332 23345688899999999999999999999999998
Q ss_pred -eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 93 -RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 93 -~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.+.++||||++|||..++...+.+++..+..++.++++||.|||+ ++|+||||||+|||++..|.|||+|||.+....
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 599999999999999999998999999999999999999999995 899999999999999999999999999985543
Q ss_pred -CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhcCCCCCCCCCCCHH
Q 023270 171 -SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE-----SQKDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
+......||..|+|||.+.+..++.++||||||++++|+++|+.||... +.-+++..+..+..+......+|++
T Consensus 231 nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~e 310 (364)
T KOG0581|consen 231 NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPE 310 (364)
T ss_pred hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHH
Confidence 3457788999999999999999999999999999999999999999875 6678888888754333333359999
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
++.||+.||.+||.+|||+.|+++|||+++-.++.
T Consensus 311 f~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 311 FRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 99999999999999999999999999999876653
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-54 Score=349.90 Aligned_cols=259 Identities=39% Similarity=0.710 Sum_probs=241.5
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
.....+|++++.||.|+||+||+|+...+++.||+|++.+.........+..+.|..++.+++||.|++++..|.+++.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 57789999999999999999999999999999999999998888877889999999999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CC
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RS 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~ 171 (284)
|+|+||+.||.|...|++.+.++++.+.-++..|+.||.|||+.||+||||||+|||++.+|+++|+|||++... +.
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998533 34
Q ss_pred CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 172 KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.....+||+.|+|||++.+..++..+|.||||+++|+|++|.+||.+.+....++++.++....+ +..++.+.+++++.
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~-p~~ls~~ardll~~ 259 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLP-PGYLSEEARDLLKK 259 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCC-CccCCHHHHHHHHH
Confidence 55667899999999999999999999999999999999999999999999999999998863222 22589999999999
Q ss_pred hcccCCCCCC----CHHhhhcCccccc
Q 023270 252 LLVKDSSKRL----SLQKIMEHPWIIK 274 (284)
Q Consensus 252 ~l~~~p~~Rp----s~~~il~~~~~~~ 274 (284)
+|..||++|. .+++|-+||||..
T Consensus 260 LL~rdp~~RLg~~~d~~~ik~HpfF~~ 286 (357)
T KOG0598|consen 260 LLKRDPRQRLGGPGDAEEIKRHPFFKG 286 (357)
T ss_pred HhccCHHHhcCCCCChHHhhcCccccc
Confidence 9999999996 8999999999975
No 5
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-53 Score=358.86 Aligned_cols=259 Identities=37% Similarity=0.663 Sum_probs=237.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDER 93 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~ 93 (284)
.-..+||...+.||+|+|++|++|++..+++.||||++.+.-+..+.-.+-+..|=..|..| .||.|++++-.|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 56788999999999999999999999999999999999888777766667777788888888 89999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-- 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-- 171 (284)
+|+|+||+++|.|.++|..-+.+++..++.++.+|+.||+|||++||+|+||||+|||++.|++++|.|||.+.....
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998733211
Q ss_pred ----------CC----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Q 023270 172 ----------KR----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS 237 (284)
Q Consensus 172 ----------~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
.. ...+||..|.+||++.....++.+|||+|||++|+|+.|.+||.+.+.-.+.++++.-...++.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~ 308 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE 308 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence 11 2356889999999999999999999999999999999999999999999999999987666655
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
.+++.+++||+++|..||.+|++++||.+||||...
T Consensus 309 --~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 309 --GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred --CCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 899999999999999999999999999999999764
No 6
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-53 Score=332.20 Aligned_cols=258 Identities=41% Similarity=0.751 Sum_probs=248.7
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
.++++|++++.||.|+||+|-+++++.++..||+|++.+...-.....+...+|-.+++.+.||.++++++.+.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 78999999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcc
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT 175 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 175 (284)
+||||.+||.|.+++++.+.+++..++-++.+|+.|++|||..+|+++|+||+|||++.+|.+||+|||++....+....
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T 200 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT 200 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.+|||.|+|||++....+..++|.||||+++|||+.|.+||...+...+++++..+...+|. .+++++++||+.+|+.
T Consensus 201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~--~fs~~~kdLl~~LL~v 278 (355)
T KOG0616|consen 201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS--YFSSDAKDLLKKLLQV 278 (355)
T ss_pred ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc--ccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999888877 7999999999999999
Q ss_pred CCCCCC-----CHHhhhcCcccccc
Q 023270 256 DSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
|-.+|. -..+|.+||||+..
T Consensus 279 D~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 279 DLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred hhHhhhcCcCCCccccccCcccccc
Confidence 999993 57789999999864
No 7
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-52 Score=356.80 Aligned_cols=262 Identities=38% Similarity=0.710 Sum_probs=238.4
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
....|++.+|.+.+.||.|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++|+||+++++++..+
T Consensus 11 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 11 DTSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE 90 (329)
T ss_pred ccCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC
Confidence 56788999999999999999999999999999999999999776554445567788999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
+..++||||+++++|.+.+...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999876555
Q ss_pred CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 172 KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
......|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+..+....+ ..++..+++|+++
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~ 248 (329)
T PTZ00263 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP--NWFDGRARDLVKG 248 (329)
T ss_pred CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC--CCCCHHHHHHHHH
Confidence 55556789999999999999899999999999999999999999999888888888877655443 3589999999999
Q ss_pred hcccCCCCCCC-----HHhhhcCcccccc
Q 023270 252 LLVKDSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 252 ~l~~~p~~Rps-----~~~il~~~~~~~~ 275 (284)
||..||.+||+ +++++.||||++.
T Consensus 249 ~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 249 LLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 99999999997 7999999999874
No 8
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.7e-52 Score=352.85 Aligned_cols=265 Identities=38% Similarity=0.630 Sum_probs=243.5
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
..+.+++..+|++++.||+|+||.||+|+-+.+|+.||+|++.+...........++.|=.+|.....+++|+++..|.+
T Consensus 133 ~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD 212 (550)
T KOG0605|consen 133 LRRTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD 212 (550)
T ss_pred hccccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC
Confidence 34557889999999999999999999999999999999999999988888889999999999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 91 DERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.+++|+||||.+||++..+|.+-+.|+++.++-++.+++-||..+|+.|++|+||||+|+|++..|++||+|||++....
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999861100
Q ss_pred -------------------------CC-----C--------------------ccccCCCcccCccccCCCCCCchhhHh
Q 023270 171 -------------------------SK-----R--------------------HTMCGTLDYLAPEMVENKEHDYAVDNW 200 (284)
Q Consensus 171 -------------------------~~-----~--------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~ 200 (284)
.. . ...+|||.|+|||++.+..++..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 00 0 124689999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCcccccc
Q 023270 201 TLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVKDSSKRL---SLQKIMEHPWIIKN 275 (284)
Q Consensus 201 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~ 275 (284)
||||||||++.|.+||.+.++.++++++..-. ..++....+++++++||.+||+ ||.+|. .++||.+||||+..
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 99999999999999999999999999998865 6667777899999999999998 999998 69999999999975
Q ss_pred C
Q 023270 276 A 276 (284)
Q Consensus 276 ~ 276 (284)
+
T Consensus 452 ~ 452 (550)
T KOG0605|consen 452 D 452 (550)
T ss_pred C
Confidence 3
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.3e-53 Score=336.48 Aligned_cols=255 Identities=27% Similarity=0.495 Sum_probs=221.0
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
|..|..+.++|+|+||+|++++++.+|+.||||+|.-+. +.+...+...+|++++++++|+|+|.++++|.....+++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 467999999999999999999999999999999996544 3345677889999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---C
Q 023270 98 LEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---R 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~ 173 (284)
+|||+. ++.+.++.. ..++.+.+..++.|++.|+.|+|+++++|+||||+||+++.+|.+||||||++.....+ .
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 999987 555555554 57899999999999999999999999999999999999999999999999998655433 3
Q ss_pred ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---------------
Q 023270 174 HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS--------------- 237 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------------- 237 (284)
..+.-|-+|.|||.+.+ ..|....||||+||++.||++|.+.|.+.++-+.+..+.+.......
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 34556889999999987 77999999999999999999999999999888877766654222211
Q ss_pred --------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 238 --------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 238 --------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
-+.++..+.+|+..||..||.+|++++|+|.||||.+
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 1345677899999999999999999999999999954
No 10
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-52 Score=354.64 Aligned_cols=258 Identities=40% Similarity=0.761 Sum_probs=235.4
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHH--HHHHHHHHHHHHHHHhCC-CCcccceeeEEecC
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEK--YKIQHQLRREMEIQSSLR-HPNILRLYGWFHDD 91 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~ 91 (284)
.....+|.+.+.||.|+||+|+.+.+..++..||+|++....... ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 456779999999999999999999999999999999776642221 134567778999999999 99999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEeeccccccc-
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGDFGWSVQS- 169 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d~~~~~~~- 169 (284)
..+++||||+.+|.|.+++.+.+.+.+..+..+++|++.|+.|||++||+|+||||+||+++.+ +++||+|||++...
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999999999999999998899999999999999999999999999999999999999999 99999999999655
Q ss_pred --CCCCccccCCCcccCccccCCCC-CC-chhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC-CHH
Q 023270 170 --RSKRHTMCGTLDYLAPEMVENKE-HD-YAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSI-SAE 244 (284)
Q Consensus 170 --~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (284)
.......+|++.|+|||++.+.. ++ .++||||+|+++|.|++|..||...+...+...+..+....+. .+ +++
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~--~~~S~~ 250 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS--YLLSPE 250 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC--CcCCHH
Confidence 34556778999999999999877 75 7999999999999999999999999999999998888777766 45 999
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
++.|+++||.+||.+|+|+.+|++||||+.
T Consensus 251 ~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 251 ARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999999999999999999999999998
No 11
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-53 Score=322.82 Aligned_cols=263 Identities=65% Similarity=1.145 Sum_probs=248.5
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.....|.+.+|.+.+.||.|.||.||+|+.+.++-.||+|++.+++.......+++++|+++.+.++||||++++++|.+
T Consensus 14 ~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 14 RATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred ccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 34578999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 91 DERIFLILEYAHRGELYRELR--KHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
....|+++||.+.|++...+. ....+++.....++.|++.|+.|+|..+++|+||+|+|+|++.+|.+|+.|||++..
T Consensus 94 ~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 94 SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 999999999999999999998 556799999999999999999999999999999999999999999999999999976
Q ss_pred c-CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 169 S-RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 169 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. .+.....+||..|.|||...+...+...|+|++|++.|+++.|.+||+..+..++++++.+....++ +.++.++.+
T Consensus 174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--~~is~~a~d 251 (281)
T KOG0580|consen 174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--STISGGAAD 251 (281)
T ss_pred cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--cccChhHHH
Confidence 6 4555667899999999999999999999999999999999999999999999999999999877777 489999999
Q ss_pred HHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 248 LISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
+|.+|+..+|.+|.+..|+++|||++.+
T Consensus 252 lI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 252 LISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred HHHHHhccCccccccHHHHhhhHHHHhc
Confidence 9999999999999999999999999875
No 12
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-51 Score=338.71 Aligned_cols=263 Identities=35% Similarity=0.656 Sum_probs=237.0
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|.+.+.||+|+||+||+++++.++..||||.+.+.... ....+.+..|+.+++.++|+||+.+++++..++.+|+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 467899999999999999999999999999999999877543 3456788899999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC------CCEEEeecccccccC
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE------GRLKIGDFGWSVQSR 170 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~------~~~~l~d~~~~~~~~ 170 (284)
|||||+||+|.+++.+.+.+++..++.++.||+.|+++||+++|+|+||||.|||++.+ -.+||.|||+++...
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999875 469999999996654
Q ss_pred C--CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC-CCCCHHHHH
Q 023270 171 S--KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA-PSISAEAKH 247 (284)
Q Consensus 171 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 247 (284)
+ -....+|+|-|+|||++....|+-|+|+||+|+++|++++|+.||...+..++...+.++....+.. ..++.+..+
T Consensus 167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~ 246 (429)
T KOG0595|consen 167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRE 246 (429)
T ss_pred chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhh
Confidence 3 3356789999999999999999999999999999999999999999999999999888765444443 356777889
Q ss_pred HHHHhcccCCCCCCCHHhhhcCccccccCCCCC
Q 023270 248 LISRLLVKDSSKRLSLQKIMEHPWIIKNANPRG 280 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (284)
++-..+..+|.+|-+..+-+.|+++..++-.+.
T Consensus 247 Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~~~~ 279 (429)
T KOG0595|consen 247 LLISLLQRNPKDRISFEDFFDHPFLAANPQDRA 279 (429)
T ss_pred hhhHHHhcCccccCchHHhhhhhhcccCccccc
Confidence 999999999999999999999999988765443
No 13
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.9e-51 Score=345.47 Aligned_cols=255 Identities=38% Similarity=0.706 Sum_probs=230.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999997655444445567889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccC
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCG 178 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 178 (284)
||+++++|.+++...+.+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...........|
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~g 160 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCG 160 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccC
Confidence 99999999999998888999999999999999999999999999999999999999999999999998665554455678
Q ss_pred CCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 179 TLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
++.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+......++. .+++.+++++++||..||.
T Consensus 161 t~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~dp~ 238 (291)
T cd05612 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR--HLDLYAKDLIKKLLVVDRT 238 (291)
T ss_pred ChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc--cCCHHHHHHHHHHcCCCHH
Confidence 99999999999888999999999999999999999999999888888888777654443 6789999999999999999
Q ss_pred CCCC-----HHhhhcCcccccc
Q 023270 259 KRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 259 ~Rps-----~~~il~~~~~~~~ 275 (284)
+||+ ++++++||||+..
T Consensus 239 ~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 239 RRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HccCCccCCHHHHhcCccccCC
Confidence 9995 9999999999753
No 14
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-50 Score=347.10 Aligned_cols=263 Identities=37% Similarity=0.666 Sum_probs=235.6
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCC-ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESK-HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
....++...+|++.+.||.|+||.||+|.+..++ ..|++|++...........+.+.+|+.+++.++||||+++++++.
T Consensus 22 ~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~ 101 (340)
T PTZ00426 22 KRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK 101 (340)
T ss_pred ccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence 3456778899999999999999999999876655 689999987655444445567889999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
.++..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 99999999999999999999999889999999999999999999999999999999999999999999999999998665
Q ss_pred CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 170 RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+......++ ..+++++.+++
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li 259 (340)
T PTZ00426 182 DTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP--KFLDNNCKHLM 259 (340)
T ss_pred CCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHH
Confidence 5555556789999999999988899999999999999999999999999988888888877655443 46899999999
Q ss_pred HHhcccCCCCCC-----CHHhhhcCcccccc
Q 023270 250 SRLLVKDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 250 ~~~l~~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
++||..||++|+ +++++++||||++.
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999999995 89999999999864
No 15
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-50 Score=343.74 Aligned_cols=257 Identities=33% Similarity=0.563 Sum_probs=229.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|+||.||+|.+..+++.||+|++.............+.+|+.++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997765554445677888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccC
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCG 178 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 178 (284)
||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...........|
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g 160 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG 160 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998766555556678
Q ss_pred CCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCC----CCCCHHHHHHHHHh
Q 023270 179 TLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--PSA----PSISAEAKHLISRL 252 (284)
Q Consensus 179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~l~~li~~~ 252 (284)
++.|+|||++.+..++.++||||||+++|+|++|..||...+..+....+....... +.. ..+++++.+++.+|
T Consensus 161 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~ 240 (333)
T cd05600 161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKL 240 (333)
T ss_pred CccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHH
Confidence 999999999999899999999999999999999999999988877776665432211 111 14689999999999
Q ss_pred cccCCCCCCCHHhhhcCcccccc
Q 023270 253 LVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 253 l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
|..+|.+||+++++++||||.+.
T Consensus 241 l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 241 INDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hhChhhhcCCHHHHHhCcccCCC
Confidence 99999999999999999999874
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-51 Score=342.44 Aligned_cols=260 Identities=29% Similarity=0.460 Sum_probs=224.5
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDE 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~ 92 (284)
-.+.+.+|.++++||.|+||.||+|+...++..||||.++.....-.+. .-.+|+..+++++ ||||+++.+++.+.+
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~--~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC--MNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH--HHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 3456789999999999999999999999999999999998766543322 2347999999998 999999999998888
Q ss_pred -eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 93 -RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 93 -~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.+|+|||||+. .|..+++.. ..+++..++.|+.||++||+|+|++|++|+|+||+|||+..+..+||.|||+++...
T Consensus 83 ~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 83 RILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred ceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc
Confidence 99999999975 999999765 579999999999999999999999999999999999999999999999999996554
Q ss_pred --CCCccccCCCcccCccccC-CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-----------
Q 023270 171 --SKRHTMCGTLDYLAPEMVE-NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP----------- 236 (284)
Q Consensus 171 --~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 236 (284)
.+...++-|-+|+|||++. .+-|+.+.|+|++||+++|+++-++.|.+.+.-+.+.++......+.
T Consensus 162 SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 162 SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 3445567788999999875 55699999999999999999999999999888887777665311111
Q ss_pred --------C---------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 237 --------S---------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 237 --------~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
. .+..+.++.++|.+|+.+||.+|||++|+|+|||||.+.
T Consensus 242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1 123678999999999999999999999999999999874
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-51 Score=335.55 Aligned_cols=257 Identities=32% Similarity=0.554 Sum_probs=223.7
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC--eEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE--RIF 95 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~--~~~ 95 (284)
..++...+.||.|+||+||++.+..+|...|||.+....... .+.+.+|++++++++|+|||+.++.....+ .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~---~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT---SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh---HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 466889999999999999999999999999999986653222 577899999999999999999999744443 699
Q ss_pred EEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccccccCC--
Q 023270 96 LILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWSVQSRS-- 171 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~~~~~-- 171 (284)
++|||+++|+|.+++++.+ .+++..++.+.+|+++||.|||++|++|+||||+|||++. ++.+||.|||.+.....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999999987 7999999999999999999999999999999999999999 79999999998854442
Q ss_pred ----CCccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 172 ----KRHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEA-ESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 172 ----~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
......|++.|+|||+..++ ...+++|||||||++.+|+||+.||.. ....+.+-.+......+..+..+|.++
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEA 252 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHH
Confidence 22345689999999999853 344699999999999999999999988 555665666665555556667899999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
++|+..|+..||++|||++++|+|||.++...
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 99999999999999999999999999988765
No 18
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-52 Score=327.72 Aligned_cols=257 Identities=30% Similarity=0.519 Sum_probs=224.9
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceee-EEecCC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYG-WFHDDE 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~-~~~~~~ 92 (284)
..-.+.+|+|+++||.|.||+||+|....+++.+|.|.+.....+. ...+....|+.++++++||||+++++ .+.++.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~-k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDA-KARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccH-HHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 4556788999999999999999999999999999999997555444 44677889999999999999999998 454444
Q ss_pred -eEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CC--ccccCCCCCCeEecCCCCEEEeec
Q 023270 93 -RIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHE--NH--VIHRDIKPENLLLDHEGRLKIGDF 163 (284)
Q Consensus 93 -~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~--~g--i~H~dl~p~nil~~~~~~~~l~d~ 163 (284)
.+++|||+|+.|+|..+++.. +.+++..+|.++.|++.||..+|. .. +.|+||||.||+++.+|.|||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 499999999999999998653 468999999999999999999998 34 899999999999999999999999
Q ss_pred ccccccCCC---CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 023270 164 GWSVQSRSK---RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPS 240 (284)
Q Consensus 164 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
|++....+. ....+|||.|++||.+...+++.+|||||+||++|+|+.-.+||.+.+-.++.+++.++...+....-
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~ 252 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEH 252 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHH
Confidence 998655433 35678999999999999999999999999999999999999999999999999999998665444457
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.|.+++.+|+.|+++||+.||+. +|++++.+
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~ 283 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQ 283 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCc-----chHHHHHH
Confidence 88999999999999999999986 56665543
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.6e-50 Score=313.76 Aligned_cols=259 Identities=29% Similarity=0.501 Sum_probs=225.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|...+++|+|.||.||+|++..+|+.||||++....... .......+|++.++.++|+||+.++++|...+.+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 57899999999999999999999999999999997765432 33456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccc-
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTM- 176 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~- 176 (284)
||++ .+|...++.. ..++..++..++.+++.|++|||++.|+|+||||+|+|++++|.+||.|||+++...++....
T Consensus 81 Efm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred Eecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 9997 5999998765 478999999999999999999999999999999999999999999999999997766554333
Q ss_pred --cCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCC-------------
Q 023270 177 --CGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--PSA------------- 238 (284)
Q Consensus 177 --~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~------------- 238 (284)
+.+-+|.|||.+.+.. |+...|+||.||++.||+-+.+.|.+.++-+.+..+......+ ..+
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 4678899999998765 8999999999999999999999999999988888877642211 111
Q ss_pred -----------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 239 -----------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 239 -----------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
+..++++.+|+..|+..||.+|+|+.|+|+|+||+..+-|-
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt 291 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT 291 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence 23467789999999999999999999999999999876553
No 20
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1e-49 Score=339.64 Aligned_cols=249 Identities=39% Similarity=0.644 Sum_probs=222.3
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++|+||+++++++..++..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999997765544445567778999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCCc
Q 023270 105 ELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLD 181 (284)
Q Consensus 105 ~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~~ 181 (284)
+|...+...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence 999999988889999999999999999999999999999999999999999999999999875432 22233458999
Q ss_pred ccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 023270 182 YLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 182 y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (284)
|+|||++.+..++.++||||||+++++|++|..||...+.......+......++ ..+++++.++|++||..||++||
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05571 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHccCCHHHcC
Confidence 9999999999999999999999999999999999998888887777776654443 47899999999999999999999
Q ss_pred -----CHHhhhcCcccccc
Q 023270 262 -----SLQKIMEHPWIIKN 275 (284)
Q Consensus 262 -----s~~~il~~~~~~~~ 275 (284)
++.++++||||+..
T Consensus 239 ~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 239 GGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CCCCCCHHHHHcCCCcCCC
Confidence 89999999999863
No 21
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.6e-49 Score=340.74 Aligned_cols=257 Identities=32% Similarity=0.567 Sum_probs=223.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||+|+||+||+|.+..+++.||+|++.............+..|+.++..++|++|+++++.+.++..+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999997765555555677888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------ 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------ 172 (284)
||+++++|.+++.+.+.+++..++.++.|++.||.|||+.|++|+||||+|||++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999999999998889999999999999999999999999999999999999999999999999987432110
Q ss_pred --------------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC
Q 023270 173 --------------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 220 (284)
Q Consensus 173 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~ 220 (284)
.....|++.|+|||++.+..++.++||||||+++|+|++|..||...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 012368899999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHhhhcCcccccc
Q 023270 221 QKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVK--DSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 221 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~--~p~~Rps~~~il~~~~~~~~ 275 (284)
..+....+.... ..++....+++++++++.+|+.. ++..||++++|++||||+..
T Consensus 241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 241 PQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence 888888777633 33333346889999999997752 23356899999999999864
No 22
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-49 Score=343.18 Aligned_cols=256 Identities=37% Similarity=0.694 Sum_probs=229.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|.+.+.||.|+||+||+|.+..+++.||+|++.............+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999997765544445677889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------ 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------ 172 (284)
||+++++|.+++...+.++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999987543322
Q ss_pred --------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHH
Q 023270 173 --------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFR 226 (284)
Q Consensus 173 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~ 226 (284)
.....|++.|+|||.+.+..++.++||||||+++++|++|..||...+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~ 240 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN 240 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence 123458899999999999999999999999999999999999999988888777
Q ss_pred HHHh--cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHhhhcCcccccc
Q 023270 227 RIMK--VDLSFPSAPSISAEAKHLISRLLVKDSSKRLS-LQKIMEHPWIIKN 275 (284)
Q Consensus 227 ~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-~~~il~~~~~~~~ 275 (284)
.+.. .....+....+++++.++|.+||. +|.+||+ ++++++||||++.
T Consensus 241 ~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 241 KIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 7776 444445545579999999999997 9999999 9999999999864
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-49 Score=328.91 Aligned_cols=268 Identities=29% Similarity=0.479 Sum_probs=233.5
Q ss_pred hhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 9 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
.....+.....+|.+...||.|..++||+|.....+..||||++..+.-... .+.+++|++.++.++||||++.+..|
T Consensus 16 ~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sF 93 (516)
T KOG0582|consen 16 SSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSF 93 (516)
T ss_pred cccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEE
Confidence 3445566778899999999999999999999999999999999977665543 68999999999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
..++.+++||.|+.+||+.++++.. ..+++..+..+++++++||.|||++|.+|||||+.|||++.+|.|+|+|||.+
T Consensus 94 vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 94 VVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred EecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence 9999999999999999999999875 46899999999999999999999999999999999999999999999999976
Q ss_pred cc---cCCCC----ccccCCCcccCccccCC--CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Q 023270 167 VQ---SRSKR----HTMCGTLDYLAPEMVEN--KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS 237 (284)
Q Consensus 167 ~~---~~~~~----~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
-. .+... ....|++.|+|||++.. ..|+.|+||||||++..||.+|..||....+...+...+++..+.+.
T Consensus 174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL 253 (516)
T ss_pred eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc
Confidence 21 11111 33478999999999654 34899999999999999999999999999888877777776554222
Q ss_pred C--------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 238 A--------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 238 ~--------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
. ..++..+++++..||..||++|||++++|.|+||++.+.+
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 1 2456789999999999999999999999999999998654
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-50 Score=343.42 Aligned_cols=254 Identities=34% Similarity=0.601 Sum_probs=237.0
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+++|.+...||+|.||+||+++.+.+.+.||+|.+.+....+ ...+.+++|+++++.++||||+.+++.|+...++++|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-KELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-HHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 578999999999999999999999999999999998765444 4568899999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc---
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH--- 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--- 174 (284)
.|||.| +|..+++.++.++++.+..++.+++.||.|||+.+|.|+|+||.||+++.+|++|++|||+++.+..+..
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 999975 9999999999999999999999999999999999999999999999999999999999999987766553
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...|+|.|+|||+..++.++..+|+||+||++||+++|++||-..+...+.+.+......++. ..+..+.+|+..+|.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~ 236 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLI 236 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhh
Confidence 456999999999999999999999999999999999999999999999999999988766666 799999999999999
Q ss_pred cCCCCCCCHHhhhcCcccccc
Q 023270 255 KDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~ 275 (284)
+||.+|.|..+++.|||.+..
T Consensus 237 kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 237 KDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred cChhhcccHHHHhcChHHhhh
Confidence 999999999999999998764
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-50 Score=346.69 Aligned_cols=260 Identities=33% Similarity=0.622 Sum_probs=240.5
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
..-|++.+.||.|+-|.|-+|++..+|+.+|||++.+...-+......+.+|+-+|+.+.|||++++++++++..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 44578899999999999999999999999999999876444445567889999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC--CCCcc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRHT 175 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~--~~~~~ 175 (284)
.||+++|.|.+++...+++++.++...++||+.|+.|+|..+|+|+|+||+|+|++..+++||.|||++.... .--..
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT 170 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET 170 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985443 34467
Q ss_pred ccCCCcccCccccCCCCCC-chhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
.+|+|-|.+||+..+..|+ .++||||-|+|+|.|+||++||.+.+...++.+..++.+..+. .+++++++||++||+
T Consensus 171 SCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs--~Is~eaQdLLr~ml~ 248 (786)
T KOG0588|consen 171 SCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS--NISSEAQDLLRRMLD 248 (786)
T ss_pred cCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC--cCCHHHHHHHHHHhc
Confidence 7899999999999999975 6999999999999999999999999999999999999877775 899999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
.||.+|.|.++|+.|||++......
T Consensus 249 VDp~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 249 VDPSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred cCccccccHHHHhhCchhhcCCCCC
Confidence 9999999999999999999887654
No 26
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.9e-49 Score=333.47 Aligned_cols=247 Identities=38% Similarity=0.635 Sum_probs=220.5
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||+|+||.||++.+..++..||+|++.............+.+|+.++..++|+||+++++++..++..++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999998765544444556778899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCCccc
Q 023270 107 YRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYL 183 (284)
Q Consensus 107 ~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~~y~ 183 (284)
.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++.|+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~ 160 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL 160 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence 9999888889999999999999999999999999999999999999999999999999875422 2223446899999
Q ss_pred CccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC--
Q 023270 184 APEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRL-- 261 (284)
Q Consensus 184 aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-- 261 (284)
|||++.+..++.++||||||+++++|++|..||...+..+...........++ ..+++++.+++.+||..||.+||
T Consensus 161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~R~~~ 238 (312)
T cd05585 161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP--DGFDRDAKDLLIGLLSRDPTRRLGY 238 (312)
T ss_pred CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC--CcCCHHHHHHHHHHcCCCHHHcCCC
Confidence 99999999999999999999999999999999999888888887776654443 47899999999999999999997
Q ss_pred -CHHhhhcCcccccc
Q 023270 262 -SLQKIMEHPWIIKN 275 (284)
Q Consensus 262 -s~~~il~~~~~~~~ 275 (284)
++.+++.||||.+.
T Consensus 239 ~~~~e~l~hp~~~~~ 253 (312)
T cd05585 239 NGAQEIKNHPFFSQL 253 (312)
T ss_pred CCHHHHHcCCCcCCC
Confidence 57999999999974
No 27
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.4e-49 Score=339.79 Aligned_cols=256 Identities=35% Similarity=0.626 Sum_probs=225.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|+||+||+|.+..+++.||+|++.............+.+|+.++..++|+||+++++.+..++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 48999999999999999999999999999999997765444455667889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------ 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------ 172 (284)
||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||+|+|||++.++.++|+|||++......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999987432110
Q ss_pred -----------------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCC
Q 023270 173 -----------------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFE 217 (284)
Q Consensus 173 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~ 217 (284)
.....|++.|+|||++.+..++.++|||||||++++|++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 012358899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHhcccCCCCCCC---HHhhhcCcccccc
Q 023270 218 AESQKDTFRRIMKVDLS--FPSAPSISAEAKHLISRLLVKDSSKRLS---LQKIMEHPWIIKN 275 (284)
Q Consensus 218 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~~~~~~~~ 275 (284)
..+..+....+...... .+....+++++.++|.+|+. +|.+|++ ++++++||||.+.
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 241 SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 98888877777654332 23333578999999999996 9999998 9999999999764
No 28
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-48 Score=338.62 Aligned_cols=266 Identities=33% Similarity=0.543 Sum_probs=230.4
Q ss_pred hhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 9 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
+.....+....+|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++|+||+++++++
T Consensus 33 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~ 112 (370)
T cd05596 33 EKITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF 112 (370)
T ss_pred HhhccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 44556778889999999999999999999999999999999999765444444456677899999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
..++..++||||+++++|.+++.+. .+++..+..++.|++.||.|||+.|++|+||+|+|||++.++.++|+|||++..
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 113 QDDKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred ecCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 9999999999999999999988664 588999999999999999999999999999999999999999999999999854
Q ss_pred cCCC----CccccCCCcccCccccCCC----CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCC
Q 023270 169 SRSK----RHTMCGTLDYLAPEMVENK----EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSA 238 (284)
Q Consensus 169 ~~~~----~~~~~~~~~y~aPE~~~~~----~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~ 238 (284)
.... .....|++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+....+.++.... ..++..
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD 271 (370)
T ss_pred ccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCc
Confidence 3321 2334689999999998653 37889999999999999999999999998888888877643 333444
Q ss_pred CCCCHHHHHHHHHhcccCCCC--CCCHHhhhcCcccccc
Q 023270 239 PSISAEAKHLISRLLVKDSSK--RLSLQKIMEHPWIIKN 275 (284)
Q Consensus 239 ~~~~~~l~~li~~~l~~~p~~--Rps~~~il~~~~~~~~ 275 (284)
..++.++.++|++||..+|.+ |+|++++++||||++.
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 468999999999999999987 9999999999999874
No 29
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-48 Score=332.56 Aligned_cols=249 Identities=39% Similarity=0.655 Sum_probs=221.6
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
+.||+|+||.||++.+..++..||+|++.............+.+|+++++.++||||+++++.+..++..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999999999999997765444445567778999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCccccCCCc
Q 023270 105 ELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRHTMCGTLD 181 (284)
Q Consensus 105 ~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~~~~~~~~ 181 (284)
+|..++.....+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ......|++.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence 9999998888899999999999999999999999999999999999999999999999998754221 2223458899
Q ss_pred ccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 023270 182 YLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 182 y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (284)
|+|||++.+..++.++||||||+++|+|++|..||...+...............+ ..+++++.++|.+||..||++||
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHccCCHHHhC
Confidence 9999999998999999999999999999999999998888887777776554443 37899999999999999999998
Q ss_pred -----CHHhhhcCcccccc
Q 023270 262 -----SLQKIMEHPWIIKN 275 (284)
Q Consensus 262 -----s~~~il~~~~~~~~ 275 (284)
++.++++||||.+.
T Consensus 239 ~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 239 GGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CCCCCCHHHHHcCCCcCCC
Confidence 99999999999864
No 30
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.8e-48 Score=339.06 Aligned_cols=257 Identities=30% Similarity=0.532 Sum_probs=222.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+.|.+++.||.|+||+||+|.+..+++.||+|++.............+.+|+.+++.++|+||+++++++.+++.+++||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 46999999999999999999999999999999997766555555678899999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS------- 171 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~------- 171 (284)
||+++++|.+++.+.+.+++..+..++.|++.||.|||..||+|+||||+||+++.+++++|+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9999999999999888899999999999999999999999999999999999999999999999998632100
Q ss_pred -------------------------------------------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHH
Q 023270 172 -------------------------------------------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYE 208 (284)
Q Consensus 172 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 208 (284)
......|++.|+|||++.+..++.++|||||||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e 240 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence 0012358899999999998889999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCHHhhhcCcccccc
Q 023270 209 FLYGAPPFEAESQKDTFRRIMKV--DLSFPSAPSISAEAKHLISRLL--VKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 209 l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l--~~~p~~Rps~~~il~~~~~~~~ 275 (284)
|++|..||...+..+....+... ....+....+++++.+||.+|+ ..++..||+++++++||||++.
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 241 MLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999999988877766666542 2333444468999999999965 4556669999999999999864
No 31
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-49 Score=332.93 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=222.4
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERI 94 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~ 94 (284)
....|..+.+||+|+||.||+|++..+|+.||+|++...... .+....+.+||.+|++++||||+++.+++.+. +.+
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~-~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK-EGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC-CcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 455699999999999999999999999999999999765533 34567788999999999999999999999877 689
Q ss_pred EEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 95 FLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
|+|+|||+. +|.-++.+.+ .+++.++..++.||+.||.|+|.+|++|+|||.+|||++.+|++||.|||++......
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 999999986 8888887753 7999999999999999999999999999999999999999999999999999743322
Q ss_pred ---CccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCC--------
Q 023270 173 ---RHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV--DLSFPSA-------- 238 (284)
Q Consensus 173 ---~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~-------- 238 (284)
....+.|.+|.|||++.+.. |+.+.|+||.||||.||++|++.|.+.+..+.+..+.+. ......+
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~ 352 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA 352 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence 23345789999999998875 999999999999999999999999999999988887763 1111111
Q ss_pred -----------------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 239 -----------------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 239 -----------------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
..+++...+|+..||..||.+|.|+.++|+++||...
T Consensus 353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 1367888999999999999999999999999999443
No 32
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-48 Score=330.71 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=228.5
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCce-EEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHP-VALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
....+...+..+.+.||.|+||+||++... |+. ||+|++.....+... .+.+.+|+.++.+++||||+++++++.+
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 556777888899999999999999998874 444 999999877666554 7899999999999999999999999998
Q ss_pred CC-eEEEEEeecCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCCCCeEecCCC-CEEEeeccc
Q 023270 91 DE-RIFLILEYAHRGELYRELRK--HRRFTEQQAATYIASLTNALAYCHENH-VIHRDIKPENLLLDHEG-RLKIGDFGW 165 (284)
Q Consensus 91 ~~-~~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~~i~~~l~~lh~~g-i~H~dl~p~nil~~~~~-~~~l~d~~~ 165 (284)
+. .+++||||+++|+|.+++.. ...++...++.++.||+.|+.|||+.+ |+|+||||+|||++.++ ++||+|||+
T Consensus 111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 87 79999999999999999988 578999999999999999999999999 99999999999999997 999999999
Q ss_pred ccccCC---CCccccCCCcccCccccC--CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 023270 166 SVQSRS---KRHTMCGTLDYLAPEMVE--NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPS 240 (284)
Q Consensus 166 ~~~~~~---~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
+..... ......||+.|+|||++. ...++.++||||||+++|+|+||..||..................+..+..
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~ 270 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKE 270 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCcc
Confidence 965543 233367899999999999 568999999999999999999999999999997777777777777777777
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.++.+..++..||..||..||++.+|+.-
T Consensus 271 ~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 271 CPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred CCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 99999999999999999999999998753
No 33
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.7e-48 Score=331.06 Aligned_cols=254 Identities=33% Similarity=0.596 Sum_probs=223.9
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC-CcccceeeEEecCCeEEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH-PNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h-~~i~~~~~~~~~~~~~~~v~ 98 (284)
+|++.+.||.|+||.||+|.+..+++.||+|++...........+.+..|.+++..+.| ++++++++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 68999999999999999999999999999999976554444445677788888888876 46888999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~ 175 (284)
||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT 160 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence 999999999999888889999999999999999999999999999999999999999999999999875322 22234
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..|++.|+|||++.+..++.++|+||+|+++++|++|..||...+..+....+.......+ ..+++++.+++++||..
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~ 238 (324)
T cd05587 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP--KSLSKEAVSICKGLLTK 238 (324)
T ss_pred ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhc
Confidence 4589999999999999999999999999999999999999999998888888877654433 47899999999999999
Q ss_pred CCCCCCCH-----HhhhcCcccccc
Q 023270 256 DSSKRLSL-----QKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps~-----~~il~~~~~~~~ 275 (284)
||.+|+++ +++++||||+..
T Consensus 239 ~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 239 HPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999987 899999999864
No 34
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-48 Score=332.66 Aligned_cols=249 Identities=38% Similarity=0.645 Sum_probs=221.0
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
+.||.|+||.||++.+..+++.||+|++.............+.+|+++++.++|+||+++.+.+..++..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999997665444445567788999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCCc
Q 023270 105 ELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLD 181 (284)
Q Consensus 105 ~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~~ 181 (284)
+|...+.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++.
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~ 160 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE 160 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence 999999888889999999999999999999999999999999999999999999999999875422 12233458899
Q ss_pred ccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 023270 182 YLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 182 y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (284)
|+|||.+.+..++.++||||||+++++|++|..||...+..+....+......+ +..+++++.++|++||..||++|+
T Consensus 161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~ 238 (328)
T cd05593 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKF--PRTLSADAKSLLSGLLIKDPNKRL 238 (328)
T ss_pred ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccC--CCCCCHHHHHHHHHHcCCCHHHcC
Confidence 999999998889999999999999999999999999888877777766554443 347899999999999999999997
Q ss_pred -----CHHhhhcCcccccc
Q 023270 262 -----SLQKIMEHPWIIKN 275 (284)
Q Consensus 262 -----s~~~il~~~~~~~~ 275 (284)
+++++++||||...
T Consensus 239 ~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 239 GGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCCCHHHHhcCCCcCCC
Confidence 89999999999763
No 35
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.7e-48 Score=338.86 Aligned_cols=256 Identities=33% Similarity=0.576 Sum_probs=222.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++++.||.|+||+||++.+..+++.||+|++...........+.+.+|+++++.++|+||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999987665545555678889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------ 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------ 172 (284)
||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999987421100
Q ss_pred --------------------------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHH
Q 023270 173 --------------------------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYE 208 (284)
Q Consensus 173 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 208 (284)
.....|++.|+|||++.+..++.++|||||||++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 001358899999999998889999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHhhhcCcccccc
Q 023270 209 FLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVKDSSKR---LSLQKIMEHPWIIKN 275 (284)
Q Consensus 209 l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~R---ps~~~il~~~~~~~~ 275 (284)
|++|..||...+..+....+.... ..++....++.++.+||++||. +|.+| +++.+++.||||+..
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 241 CLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 999999999888877777766532 3333334588999999999997 66665 599999999999854
No 36
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.1e-48 Score=329.40 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=221.7
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
+...+|++.+.||.|+||.||++.+..++..|++|.+..... ......+.+|+++++.++|+||+++++++..++..+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 567899999999999999999999999999999999865421 223467889999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccccC-CCC
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR-SKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~-~~~ 173 (284)
+||||+++++|.+++.....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.... ...
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 159 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (331)
T ss_pred EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc
Confidence 9999999999999999888899999999999999999999985 69999999999999999999999999875432 223
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-----------------------
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK----------------------- 230 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----------------------- 230 (284)
....+++.|+|||++.+..++.++||||||+++++|++|..||...+..+.......
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP 239 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccc
Confidence 345688999999999988899999999999999999999999987665544322111
Q ss_pred -----------------------cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 231 -----------------------VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 231 -----------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
..........+++++++||++||..||++|||++++++||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred ccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence 11111112247889999999999999999999999999999987643
No 37
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=320.64 Aligned_cols=266 Identities=38% Similarity=0.642 Sum_probs=243.4
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.....+.+++|+++++||+|.-|+||+|....++..+|+|++.+.......-...+..|-++|..++||.++.++..++.
T Consensus 69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet 148 (459)
T KOG0610|consen 69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET 148 (459)
T ss_pred cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec
Confidence 34567788999999999999999999999999999999999999988887778888899999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+...|++||||+||+|..+.+++ +.+++..++-++..++-||+|||-.||+++||||+|||+.++|++.|+||.++..
T Consensus 149 ~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 149 DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecccccc
Confidence 99999999999999999998876 4699999999999999999999999999999999999999999999999998511
Q ss_pred cC----------------------------------C-C------------------------CccccCCCcccCccccC
Q 023270 169 SR----------------------------------S-K------------------------RHTMCGTLDYLAPEMVE 189 (284)
Q Consensus 169 ~~----------------------------------~-~------------------------~~~~~~~~~y~aPE~~~ 189 (284)
.. . . ....+||-.|+|||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 00 0 0 01123667799999999
Q ss_pred CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHh
Q 023270 190 NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLS----LQK 265 (284)
Q Consensus 190 ~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ 265 (284)
+...+.+.|.|+||+++|||+.|..||.+.+..++...++.....++..+.++..+++||+++|.+||++|.- +++
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 9999999999999999999999999999999999999999999999998899999999999999999999998 999
Q ss_pred hhcCccccccC
Q 023270 266 IMEHPWIIKNA 276 (284)
Q Consensus 266 il~~~~~~~~~ 276 (284)
|-+||||+..+
T Consensus 389 IK~HpFF~gVn 399 (459)
T KOG0610|consen 389 IKRHPFFEGVN 399 (459)
T ss_pred hhcCccccCCC
Confidence 99999998764
No 38
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-49 Score=338.61 Aligned_cols=254 Identities=31% Similarity=0.544 Sum_probs=227.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|....+||+|+.|.||.|....+++.||||.+....... .+-+.+|+.+|+..+|+||+.+++.+..++.+++||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 45888999999999999999999999999999997765544 357889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~ 175 (284)
||+++|+|.+.+.... +++.++..+++.++.||+|||.+||+|+|||.+|||++.+|.+||+|||++... ......
T Consensus 350 Eym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred eecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999999887644 899999999999999999999999999999999999999999999999998443 334566
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-DTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
..|||.|+|||+.....|+++.||||||++++||+.|.+||-..++- .++.-...+......++.+|+++++|+.+||+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~ 508 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLV 508 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999865554 44444455677777788999999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.|+++|+|+.++|+||||+...
T Consensus 509 ~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 509 VDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred cchhcCCCHHHHhcChhhhhcC
Confidence 9999999999999999996653
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-48 Score=324.88 Aligned_cols=256 Identities=28% Similarity=0.434 Sum_probs=217.1
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
.|++.+.||.|+||.||++.+..+++.||+|.+.............+.+|+.+++.++|++++++++.+..++..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 38899999999999999999999999999999876554443444567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCcc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~ 175 (284)
|+++++|...+... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 99999998887643 3689999999999999999999999999999999999999999999999999855322 2234
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHhc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK--VDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l 253 (284)
..|+..|+|||++.+..++.++||||||+++++|++|..||.............. .......+..+++++.+|+++||
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l 240 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLL 240 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHh
Confidence 4688999999999999999999999999999999999999987654322222211 11122334468999999999999
Q ss_pred ccCCCCCCC-----HHhhhcCcccccc
Q 023270 254 VKDSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 254 ~~~p~~Rps-----~~~il~~~~~~~~ 275 (284)
+.||++||+ ++++++||||.+.
T Consensus 241 ~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 241 TKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred hcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 999999997 8999999999875
No 40
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.2e-48 Score=337.74 Aligned_cols=256 Identities=32% Similarity=0.563 Sum_probs=223.7
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|.+++.||.|+||+||+|.+..+++.||+|++.............+.+|+.+++.++|+||+++++.+.+++.+++||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999999999999999997765544555678889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS------- 171 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~------- 171 (284)
||+++++|.+++.+.+.+++..+..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 9999999999998888899999999999999999999999999999999999999999999999998632100
Q ss_pred -------------------------------------------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHH
Q 023270 172 -------------------------------------------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYE 208 (284)
Q Consensus 172 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 208 (284)
......|++.|+|||++.+..++.++|||||||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence 0012357899999999999899999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHhhhcCcccccc
Q 023270 209 FLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVKDSSKRLS---LQKIMEHPWIIKN 275 (284)
Q Consensus 209 l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~~~~~~~~ 275 (284)
|++|..||...+..+....+.... ...+....+++++.++|.+|+ .+|++|++ ++++++||||+..
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 241 MLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 999999999888877776666532 333444568999999999986 59999997 9999999999874
No 41
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.5e-48 Score=330.62 Aligned_cols=249 Identities=37% Similarity=0.650 Sum_probs=219.4
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||+||+|.+..+++.||+|++...........+.+..|..++..+ +|+||+++++++...+.+++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999998765443334455666777777766 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|..++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP 160 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223446899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+.......+ ..+++++.+++++||..||.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R 238 (320)
T cd05590 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TWLSQDAVDILKAFMTKNPTMR 238 (320)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHC
Confidence 99999999988899999999999999999999999999999888888877654433 3689999999999999999999
Q ss_pred CCH------HhhhcCcccccc
Q 023270 261 LSL------QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~------~~il~~~~~~~~ 275 (284)
|++ ++++.||||+..
T Consensus 239 ~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 239 LGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CCCCCCCCHHHHHcCCCcCCC
Confidence 998 999999999763
No 42
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.7e-48 Score=338.93 Aligned_cols=256 Identities=32% Similarity=0.562 Sum_probs=223.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++++.||.|+||.||+|++..+++.||+|++.............+.+|+.+++.++|+||+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999997655544445567889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS------- 171 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~------- 171 (284)
||+++++|.+++...+.+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.....
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 9999999999999888899999999999999999999999999999999999999999999999998631100
Q ss_pred ---------------------------------------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhC
Q 023270 172 ---------------------------------------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYG 212 (284)
Q Consensus 172 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg 212 (284)
......|++.|+|||++.+..++.++|||||||++|+|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 00123588999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCcccccc
Q 023270 213 APPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVKDSSKRL---SLQKIMEHPWIIKN 275 (284)
Q Consensus 213 ~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~ 275 (284)
..||...+..+....+.... ...+....+++++.++|.+|+ .+|.+|+ +++++++||||+..
T Consensus 241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 99999888877766655432 223334468999999999976 5999999 99999999999863
No 43
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-49 Score=316.90 Aligned_cols=263 Identities=30% Similarity=0.486 Sum_probs=225.9
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERI 94 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~ 94 (284)
++..|+.+.+|++|+||.||+|+++.+++.||+|+++.+. ......-.-.+|+.++.+.+|+||+.+-++.... +.+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 4567999999999999999999999999999999986544 2222333456899999999999999999987654 479
Q ss_pred EEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 95 FLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
|+|||||+. +|.+++.+.+ ++...++..++.|++.|++|||.+.|+|+||||+|+|++..|.+|++|||+++..+++
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 999999985 9999998875 8999999999999999999999999999999999999999999999999999877766
Q ss_pred --CccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCCC--------
Q 023270 173 --RHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV--DLSFPSAP-------- 239 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~-------- 239 (284)
......|.+|.|||++.+.. ++...|+||+|||+.+++++++.|.+.+..+.+.++.+. ......++
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~ 311 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV 311 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence 34456789999999998776 899999999999999999999999999888888777663 11111111
Q ss_pred --------------------CCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCCCC
Q 023270 240 --------------------SISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPRGT 281 (284)
Q Consensus 240 --------------------~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~ 281 (284)
.++....+|++.+|..||.+|.|+++.|.|+||.+.+.|.++
T Consensus 312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P 373 (419)
T KOG0663|consen 312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDP 373 (419)
T ss_pred hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCCh
Confidence 145888999999999999999999999999999998776543
No 44
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.4e-48 Score=325.99 Aligned_cols=253 Identities=29% Similarity=0.473 Sum_probs=211.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|+||+||++.+..+++.|++|++...... ....+.+.+|+.+++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 4799999999999999999999999999999998654322 233456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC----Cc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----RH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----~~ 174 (284)
||++++++..+......++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT 159 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence 99998766655555567899999999999999999999999999999999999999999999999998543221 12
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-------------------CC
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-------------------SF 235 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------------~~ 235 (284)
...+++.|+|||++.+..++.++|+||||+++++|++|.+||...+..+....+..... ..
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07848 160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF 239 (287)
T ss_pred ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence 34578899999999988899999999999999999999999988765544333222100 00
Q ss_pred CC-----------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 PS-----------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ~~-----------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+. ...+++++.+|+.+||.+||++|||++++|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00 11367889999999999999999999999999998
No 45
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-48 Score=333.56 Aligned_cols=256 Identities=33% Similarity=0.600 Sum_probs=224.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|.+.+.||+|+||+||++.+..+++.||+|++...........+.+.+|+.+++.++|++|+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998766544455677889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---- 173 (284)
||+++++|.+++.+. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~ 160 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS 160 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence 999999999999886 679999999999999999999999999999999999999999999999999985433221
Q ss_pred ccccCCCcccCccccC------CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHH
Q 023270 174 HTMCGTLDYLAPEMVE------NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEA 245 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~------~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 245 (284)
....+++.|+|||++. ...++.++||||||+++|+|++|..||...+.......+.... ..++..+.+++++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (330)
T cd05601 161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDF 240 (330)
T ss_pred ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHH
Confidence 2235789999999986 4557889999999999999999999999888887777766543 2334445689999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
.+|+..||. +|.+|||+++++.||||++.
T Consensus 241 ~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 241 LDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred HHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 999999997 99999999999999999864
No 46
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-50 Score=311.99 Aligned_cols=256 Identities=33% Similarity=0.616 Sum_probs=232.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++-..||+|.|+.|+++.+..+|+.+++|.+....+... .-+.+.+|+++-+.++||||+++.+.+.+.+..|+|+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 469999999999999999999999999999999877666554 3468899999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC---CCCEEEeecccccccC--CCC
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH---EGRLKIGDFGWSVQSR--SKR 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~---~~~~~l~d~~~~~~~~--~~~ 173 (284)
|+++|+.|-.-|-..--.++..+-..++||+++|.|+|.+||+|+|++|.|+++-. ...+||+|||++...+ ...
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 99999999777766566789999999999999999999999999999999999943 4579999999985544 344
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHH
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS--APSISAEAKHLISR 251 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 251 (284)
....|+|.|+|||++...+++..+|||+-|+++|-|+.|.+||.+.+...++++++++...++. ++.++++.++|+++
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvrr 249 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRR 249 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHH
Confidence 5677999999999999999999999999999999999999999999999999999999777766 67899999999999
Q ss_pred hcccCCCCCCCHHhhhcCcccccc
Q 023270 252 LLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
||..||.+|.|+.+.|+|||+.+-
T Consensus 250 ML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 250 MLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HhccChhhhccHHHHhCCchhcch
Confidence 999999999999999999999874
No 47
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-49 Score=329.85 Aligned_cols=264 Identities=34% Similarity=0.655 Sum_probs=231.6
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH-----------HHHHHHHHHHHHHHhCCCC
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY-----------KIQHQLRREMEIQSSLRHP 79 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~h~ 79 (284)
.......+++|.+.+.||+|.||.|.+|.+..+++.||||++.+...... ...+..++|+.++++++|+
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~ 168 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHP 168 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCc
Confidence 34455678999999999999999999999999999999999876544221 1135889999999999999
Q ss_pred cccceeeEEecC--CeEEEEEeecCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC
Q 023270 80 NILRLYGWFHDD--ERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG 156 (284)
Q Consensus 80 ~i~~~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~-l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~ 156 (284)
|||+++++..+. +.+|+|+|||+.|.+.+ ....+. ++..+++.++++++.||.|||.+||+||||||+|+|++.+|
T Consensus 169 nVV~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 169 NVVKLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred CeeEEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC
Confidence 999999998765 58999999999888764 333344 89999999999999999999999999999999999999999
Q ss_pred CEEEeecccccccC--------CCCccccCCCcccCccccCCCC----CCchhhHhhHHHHHHHHHhCCCCCCCCChHHH
Q 023270 157 RLKIGDFGWSVQSR--------SKRHTMCGTLDYLAPEMVENKE----HDYAVDNWTLGILCYEFLYGAPPFEAESQKDT 224 (284)
Q Consensus 157 ~~~l~d~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~ 224 (284)
+|||+|||.+.... .......|||.|+|||...++. .+.+.||||+|++||.|+.|..||.+....++
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 99999999875331 1113467999999999987643 35789999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 225 FRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
..++....+.++..+.+..++++||.+||++||.+|.+..+|..|||..+.
T Consensus 328 ~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 328 FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 999999999999988899999999999999999999999999999999877
No 48
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.1e-48 Score=324.78 Aligned_cols=254 Identities=28% Similarity=0.493 Sum_probs=213.1
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
-++.+|++.+.||.|+||+||++.+..++..||+|++...... .....+.+|+++++.++|+||+++++++..++..+
T Consensus 2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 79 (288)
T cd07871 2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLT 79 (288)
T ss_pred CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 3578999999999999999999999999999999998643221 12345678999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 96 LILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
+|+||+++ +|.+++...+ .++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 99999985 8888887654 578999999999999999999999999999999999999999999999998754322
Q ss_pred CCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----------------
Q 023270 172 KRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS---------------- 234 (284)
Q Consensus 172 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---------------- 234 (284)
......+++.|+|||.+.+ ..++.++||||+|+++++|++|..||.+.+..+.+..+......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 2223456889999998865 45899999999999999999999999887776655544331100
Q ss_pred ---C---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 235 ---F---------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 235 ---~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
. ...+.+++++.+|+++||.+||.+|||++|+|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0 0113567899999999999999999999999999998
No 49
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.7e-48 Score=334.12 Aligned_cols=267 Identities=31% Similarity=0.548 Sum_probs=228.4
Q ss_pred HhhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeE
Q 023270 8 REDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGW 87 (284)
Q Consensus 8 ~~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~ 87 (284)
.++.........+|++.+.||+|+||.||++.+..+++.||+|++.............+.+|+.+++.++||||+++++.
T Consensus 32 ~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~ 111 (370)
T cd05621 32 VRKIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCA 111 (370)
T ss_pred HHHHHhcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 34455667778899999999999999999999999999999999876544444445667889999999999999999999
Q ss_pred EecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 88 FHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 88 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
+..++..++||||+++++|.+++... .++...+..++.||+.||.|||+.|++|+||||+|||++.++.+||+|||++.
T Consensus 112 ~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 112 FQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccce
Confidence 99999999999999999999988664 58999999999999999999999999999999999999999999999999985
Q ss_pred ccCCC----CccccCCCcccCccccCCCC----CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCC
Q 023270 168 QSRSK----RHTMCGTLDYLAPEMVENKE----HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL--SFPS 237 (284)
Q Consensus 168 ~~~~~----~~~~~~~~~y~aPE~~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--~~~~ 237 (284)
..... .....|++.|+|||++.+.. ++.++|+||+|+++|+|++|..||...+......++..... .++.
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 270 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE 270 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC
Confidence 54322 13456899999999986543 77899999999999999999999999988888888776443 3333
Q ss_pred CCCCCHHHHHHHHHhcccCCCC--CCCHHhhhcCcccccc
Q 023270 238 APSISAEAKHLISRLLVKDSSK--RLSLQKIMEHPWIIKN 275 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~--Rps~~~il~~~~~~~~ 275 (284)
...+++.+++++..||..++.+ |++++++++||||++.
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 3357999999999999855543 8999999999999874
No 50
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.2e-48 Score=328.48 Aligned_cols=252 Identities=33% Similarity=0.609 Sum_probs=219.2
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHH---HHhCCCCcccceeeEEecCCeEEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEI---QSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~---~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
|++++.||+|++|.||++.+..+++.||+|++...........+.+..|.++ ++.++|+||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 7899999999999999999999999999999976554333344556566554 4567899999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRH 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~ 174 (284)
|||+++++|...+.. +.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... ....
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS 159 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence 999999999887754 568999999999999999999999999999999999999999999999999875322 2223
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...|++.|+|||.+.+..++.++||||||+++|+|++|..||...+..+....+.......+ ..+++++.+++++||.
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~ 237 (324)
T cd05589 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP--RFLSREAISIMRRLLR 237 (324)
T ss_pred ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhh
Confidence 45688999999999998999999999999999999999999999988888888777654433 4689999999999999
Q ss_pred cCCCCCC-----CHHhhhcCcccccc
Q 023270 255 KDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 255 ~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
.||.+|| +++++++||||++.
T Consensus 238 ~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 238 RNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred cCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 9999999 79999999999874
No 51
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6e-48 Score=328.55 Aligned_cols=248 Identities=35% Similarity=0.629 Sum_probs=219.2
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||.||+|.+..+++.||+|++...........+.+..|.+++..+ +|++|+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999999765544444455666788888765 799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP 160 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223345789
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||++.+..++.++||||||+++++|++|..||...+..+....+.......+ ..+++++.+++.+||..||++|
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R 238 (321)
T cd05591 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKR 238 (321)
T ss_pred cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHc
Confidence 99999999988999999999999999999999999999999888888887654443 3689999999999999999999
Q ss_pred C-------CHHhhhcCccccc
Q 023270 261 L-------SLQKIMEHPWIIK 274 (284)
Q Consensus 261 p-------s~~~il~~~~~~~ 274 (284)
| +++++++||||..
T Consensus 239 ~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 239 LGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CCCCCCCCCHHHHhcCCccCC
Confidence 9 9999999999976
No 52
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=9.5e-48 Score=327.60 Aligned_cols=254 Identities=33% Similarity=0.583 Sum_probs=223.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+|.+.+.||+|+||.||++.+..++..||+|++................+..++..+ +|++++++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 689999999999999999999999999999999765543333445566677777766 5799999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~ 175 (284)
||+++++|...+.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~ 160 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT 160 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence 999999999999888889999999999999999999999999999999999999999999999999875432 22234
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..|++.|+|||++.+..++.++|+||||+++++|++|..||...+.......+......++ ..++.++.+++.+||..
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~l~~ 238 (323)
T cd05616 161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--KSMSKEAVAICKGLMTK 238 (323)
T ss_pred CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CcCCHHHHHHHHHHccc
Confidence 5688999999999999999999999999999999999999999998888888877655444 36899999999999999
Q ss_pred CCCCCCCH-----HhhhcCcccccc
Q 023270 256 DSSKRLSL-----QKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps~-----~~il~~~~~~~~ 275 (284)
+|.+|+++ .++++||||+..
T Consensus 239 ~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 239 HPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred CHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 99999985 899999999864
No 53
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4e-48 Score=330.20 Aligned_cols=249 Identities=38% Similarity=0.642 Sum_probs=220.2
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
+.||.|+||.||++.+..++..||+|++.............+..|++++..++|+||+++.+.+..++..++||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999997765444444566778999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 105 ELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 105 ~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
+|..++.....+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 160 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence 999999888889999999999999999999997 799999999999999999999999999875322 2223345899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||++.+..++.++||||||+++++|++|..||...+.......+.......+ ..+++++.+++++||..||++|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R 238 (325)
T cd05594 161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLSPEAKSLLSGLLKKDPKQR 238 (325)
T ss_pred ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHhhcCHHHh
Confidence 99999999998999999999999999999999999998888777777666544443 4689999999999999999999
Q ss_pred C-----CHHhhhcCcccccc
Q 023270 261 L-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 261 p-----s~~~il~~~~~~~~ 275 (284)
+ ++.++++||||.+.
T Consensus 239 ~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 239 LGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred CCCCCCCHHHHhcCCCcCCC
Confidence 7 99999999999864
No 54
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.4e-48 Score=333.35 Aligned_cols=256 Identities=34% Similarity=0.602 Sum_probs=224.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||+|+||+||+|.+..+++.||+|++.............++.|+.++..++|++++++++.+..++.+++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997665545555678888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------ 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------ 172 (284)
||+++++|.+++.+.+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999986422110
Q ss_pred --------------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC
Q 023270 173 --------------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 220 (284)
Q Consensus 173 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~ 220 (284)
.....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 112358899999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCcccccc
Q 023270 221 QKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLLVKDSSKRL---SLQKIMEHPWIIKN 275 (284)
Q Consensus 221 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~ 275 (284)
.......+.... ..++....++++++++|.+|+ .+|.+|+ +++++++||||++.
T Consensus 241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 241 PQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred HHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence 888877776532 233333357899999999987 4999998 58999999999874
No 55
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.5e-47 Score=325.65 Aligned_cols=249 Identities=34% Similarity=0.611 Sum_probs=219.6
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||+||++.+..+++.||+|++.............+..|..++..+ +|+||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999776544444456667788888777 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+.+...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......+++
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~ 160 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP 160 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875421 2223345789
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++|+||||+++++|++|..||...+.......+....... +..+++++.+++++||..||.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R 238 (318)
T cd05570 161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRY--PRWLSKEAKSILKSFLTKNPEKR 238 (318)
T ss_pred cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC--CCcCCHHHHHHHHHHccCCHHHc
Confidence 9999999999999999999999999999999999999888888877776655443 33689999999999999999999
Q ss_pred CCH-----HhhhcCcccccc
Q 023270 261 LSL-----QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~-----~~il~~~~~~~~ 275 (284)
||+ .++++||||++.
T Consensus 239 ~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 239 LGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CCCCCCCHHHHhcCCCcCCC
Confidence 999 999999999874
No 56
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-47 Score=325.01 Aligned_cols=249 Identities=30% Similarity=0.575 Sum_probs=215.8
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh-CCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS-LRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||.||++.+..+++.||+|++................|..++.. .+|++++++++++..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 479999999999999999999999999976543322334455667777664 4899999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~~~~~ 180 (284)
++|..++.....++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++... ........|++
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence 999999988888999999999999999999999999999999999999999999999999987532 22233456899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||++.+..++.++||||||+++++|++|..||...+..+....+.......+ ..++.++++++++||..||++|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R 238 (316)
T cd05620 161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP--RWITKESKDILEKLFERDPTRR 238 (316)
T ss_pred CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHccCCHHHc
Confidence 99999999999999999999999999999999999998888887777766544333 3689999999999999999999
Q ss_pred CCH-HhhhcCcccccc
Q 023270 261 LSL-QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~-~~il~~~~~~~~ 275 (284)
|++ +++++||||.+.
T Consensus 239 ~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 239 LGVVGNIRGHPFFKTI 254 (316)
T ss_pred CCChHHHHcCCCcCCC
Confidence 998 589999999874
No 57
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-48 Score=314.56 Aligned_cols=260 Identities=28% Similarity=0.473 Sum_probs=219.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec-----C
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD-----D 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~-----~ 91 (284)
....|...+.||.|++|.|..|.+..+|+.||||++.... ......+...+|+++++.++|+||+.+.+++.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 3445666899999999999999999999999999996433 333445667789999999999999999999865 3
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC-
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR- 170 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~- 170 (284)
+.+|+|+|+++ .+|...+++++.|+.+.+..++.|++.||+|+|+.+++|+|+||+|++++.++.+|++|||+++...
T Consensus 99 ~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence 46899999995 5999999998889999999999999999999999999999999999999999999999999996663
Q ss_pred ----CCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC--------
Q 023270 171 ----SKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-------- 237 (284)
Q Consensus 171 ----~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 237 (284)
.-...+.-|-+|.|||++.+ ..++.+.||||+|||+.||++|++.|.+.+..+.+..++.....++.
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 22245667889999998754 45999999999999999999999999987766655555443222211
Q ss_pred ---------------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 238 ---------------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 238 ---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
-+..++...+|+.+||..||.+|+|++|+|+|||+..-.+|
T Consensus 258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp 319 (359)
T KOG0660|consen 258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDP 319 (359)
T ss_pred HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCC
Confidence 13578899999999999999999999999999999876544
No 58
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-47 Score=324.23 Aligned_cols=258 Identities=28% Similarity=0.428 Sum_probs=209.6
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
+..+|++.+.||.|+||+||+|.+..+++.||+|++....... ....+.+|+.+++.++|+||+++++++..++..++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 4578999999999999999999999999999999986433211 12356689999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---C
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---K 172 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~ 172 (284)
||||++ ++|.+++... +.++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++..... .
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 159 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT 159 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence 999996 5777777654 5689999999999999999999999999999999999999999999999998754322 2
Q ss_pred CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCC---------------
Q 023270 173 RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-DTFRRIMKVDLSF--------------- 235 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~--------------- 235 (284)
.....+++.|+|||++.+ ..++.++||||+|+++++|++|..||.+.... +.+..+.......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK 239 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence 233457889999999865 45788999999999999999999999875432 2222221100000
Q ss_pred ------C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 236 ------P---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 236 ------~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
. .....++++.+|+++||+.||++|||++++++||||++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 0 00124578899999999999999999999999999998754
No 59
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.1e-47 Score=318.45 Aligned_cols=256 Identities=43% Similarity=0.731 Sum_probs=230.3
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|++|.||++.+..+++.+++|++.............+.+|+++++.++|+||+++++++.+++..++|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999987655544455677889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccC
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCG 178 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 178 (284)
||+++++|.+++...+.++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++...........+
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 160 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCG 160 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCC
Confidence 99999999999998889999999999999999999999999999999999999999999999999998666555555568
Q ss_pred CCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 179 TLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
++.|+|||.+.+...+.++|+||||+++++|++|..||...+..........+.... +..++..+.+++.+||..||.
T Consensus 161 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~ 238 (290)
T cd05580 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF--PSFFSPDAKDLIRNLLQVDLT 238 (290)
T ss_pred CccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccC--CccCCHHHHHHHHHHccCCHH
Confidence 899999999988888999999999999999999999998888777777766554433 346799999999999999999
Q ss_pred CCC-----CHHhhhcCccccccC
Q 023270 259 KRL-----SLQKIMEHPWIIKNA 276 (284)
Q Consensus 259 ~Rp-----s~~~il~~~~~~~~~ 276 (284)
+|+ +++++++||||+..+
T Consensus 239 ~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 239 KRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred HccCcccCCHHHHHcCcccccCC
Confidence 999 999999999998764
No 60
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-47 Score=329.99 Aligned_cols=265 Identities=32% Similarity=0.551 Sum_probs=227.5
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
........++|++.+.||.|+||.||++.+..+++.||+|++.............+.+|+.+++.++|+||+++++.+..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 45567788999999999999999999999999999999999876544444445667889999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 91 DERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
++..++||||+++++|.+++... .++...+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 99999999999999999988764 58899999999999999999999999999999999999999999999999985443
Q ss_pred CC----CccccCCCcccCccccCCCC----CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCC
Q 023270 171 SK----RHTMCGTLDYLAPEMVENKE----HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPS 240 (284)
Q Consensus 171 ~~----~~~~~~~~~y~aPE~~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~ 240 (284)
.. .....|++.|+|||++.+.. ++.++||||||+++|+|++|..||...+.......+.... ..++....
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 273 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCC
Confidence 21 22446899999999986543 7889999999999999999999999998888888777643 33444457
Q ss_pred CCHHHHHHHHHhcccCCCC--CCCHHhhhcCccccccC
Q 023270 241 ISAEAKHLISRLLVKDSSK--RLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~--Rps~~~il~~~~~~~~~ 276 (284)
++.+++++|..||..++.+ |++++++++||||++.+
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 274 ISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred CCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 8999999999999844433 78999999999998753
No 61
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.6e-47 Score=324.83 Aligned_cols=250 Identities=38% Similarity=0.688 Sum_probs=219.0
Q ss_pred eeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHH-HHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 24 GRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIE-KYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~-~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
++.||.|+||.||++.+. .+++.||+|++...... .......+..|+.+++.++|+||+++++.+..++..++|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999864 46788999998765432 22334567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTM 176 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~ 176 (284)
|+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... ......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF 160 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999875322 222334
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccC
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKD 256 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 256 (284)
.|++.|+|||++.+..++.++||||||+++|+|++|..||...+.......+..+.... ++.+++++.+++.+||..+
T Consensus 161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~ 238 (323)
T cd05584 161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNL--PPYLTPEARDLLKKLLKRN 238 (323)
T ss_pred CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHcccC
Confidence 68899999999998889999999999999999999999999998888888887765433 4478999999999999999
Q ss_pred CCCCC-----CHHhhhcCcccccc
Q 023270 257 SSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 257 p~~Rp-----s~~~il~~~~~~~~ 275 (284)
|++|| +++++++||||+..
T Consensus 239 p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 239 PSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HhHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999 89999999999763
No 62
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.2e-47 Score=326.10 Aligned_cols=249 Identities=30% Similarity=0.602 Sum_probs=214.2
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||.||++.+..+++.||+|++...........+.+..|..++..+ +|+||+++++++..++.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4689999999999999999999999999876555555566788899998888 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~~~~~ 180 (284)
++|..++...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++... ........|++
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP 160 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence 999999988889999999999999999999999999999999999999999999999999987532 22233456899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE---------SQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.|+|||++.+..++.++|+||||+++|+|++|..||... ........+...... .+..++.++.+++++
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~ 238 (329)
T cd05588 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKASSVLKG 238 (329)
T ss_pred cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC--CCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999632 112233344444333 334689999999999
Q ss_pred hcccCCCCCCC------HHhhhcCcccccc
Q 023270 252 LLVKDSSKRLS------LQKIMEHPWIIKN 275 (284)
Q Consensus 252 ~l~~~p~~Rps------~~~il~~~~~~~~ 275 (284)
||..||.+|++ ++++++||||.+.
T Consensus 239 ~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 239 FLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 99999999997 7899999999863
No 63
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-47 Score=326.70 Aligned_cols=257 Identities=39% Similarity=0.696 Sum_probs=235.2
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~ 96 (284)
-..|.+.+.||.|.||.||.++...+|+.+|+|++.+...........+.+|+++|+++. |||++.+.+.++....+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 346999999999999999999999999999999998877655445678999999999998 9999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC----CCEEEeecccccccCC-
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE----GRLKIGDFGWSVQSRS- 171 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~----~~~~l~d~~~~~~~~~- 171 (284)
|||+|.||.|.+.+... .+++.++..++.|++.++.|||+.|++|+|++|+|+|+... +.++++|||++.....
T Consensus 114 vmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~ 192 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG 192 (382)
T ss_pred EEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence 99999999999999876 49999999999999999999999999999999999999654 4799999999966654
Q ss_pred -CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC--CCCCCHHHHHH
Q 023270 172 -KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS--APSISAEAKHL 248 (284)
Q Consensus 172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l 248 (284)
......|++.|+|||++....++...|+||+|+++|.|++|.+||.+.+......++..+...+.. ++.++..++++
T Consensus 193 ~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~ 272 (382)
T KOG0032|consen 193 ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDF 272 (382)
T ss_pred ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHH
Confidence 456678999999999999999999999999999999999999999999999999999998765544 56899999999
Q ss_pred HHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
|+.||..||.+|+|+.++|+|||++..
T Consensus 273 i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 273 IRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred HHHhcccCcccCCCHHHHhcCccccCC
Confidence 999999999999999999999999975
No 64
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.8e-47 Score=323.61 Aligned_cols=249 Identities=33% Similarity=0.584 Sum_probs=214.7
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh-CCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS-LRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||.||+|.+..+++.||+|++...........+....+..++.. .+|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999999999999999976544333334444555666554 4899999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|..++.....++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~ 160 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence 9999999888889999999999999999999999999999999999999999999999999985432 2223446899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++||||||+++++|++|..||.+.+..+....+...... .+..++.++.+++++||..+|.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ll~~~l~~~P~~R 238 (316)
T cd05592 161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH--FPRWISKEAKDCLSKLFERDPTKR 238 (316)
T ss_pred cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCCHHHc
Confidence 999999999888999999999999999999999999998888888777655433 334689999999999999999999
Q ss_pred CCH-HhhhcCcccccc
Q 023270 261 LSL-QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~-~~il~~~~~~~~ 275 (284)
|++ +++++||||...
T Consensus 239 ~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 239 LGVDGDIRQHPFFRGI 254 (316)
T ss_pred CCChHHHHcCcccCCC
Confidence 986 589999999864
No 65
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.1e-47 Score=325.50 Aligned_cols=249 Identities=36% Similarity=0.660 Sum_probs=216.1
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHH-HHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREME-IQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~-~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||+||++.+..+++.|++|++.............+..+.. +++.++|+||+++++.+..++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999999999999997655433333344444444 56789999999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|..++...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223345889
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||++.+..++.++||||||+++++|++|..||...+..+....+....... .+.+++++.++|.+||..||.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R 238 (323)
T cd05575 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL--KPNISVSARHLLEGLLQKDRTKR 238 (323)
T ss_pred hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcCHHhC
Confidence 9999999999999999999999999999999999999988888888777664433 34689999999999999999999
Q ss_pred CCH----HhhhcCcccccc
Q 023270 261 LSL----QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~----~~il~~~~~~~~ 275 (284)
|++ .++++||||...
T Consensus 239 ~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 239 LGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCHHHHHcCCCcCCC
Confidence 988 699999999763
No 66
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.3e-47 Score=322.04 Aligned_cols=254 Identities=33% Similarity=0.592 Sum_probs=222.8
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+|.+.+.||.|+||+||+|.+..+++.||+|++...........+.+..|..++..+. |++++++++++...+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 5889999999999999999999999999999997655444344556677888888776 577888999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~ 175 (284)
||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .....
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~ 160 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT 160 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence 999999999999888889999999999999999999999999999999999999999999999999875422 12233
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..|++.|+|||++.+..++.++|+||+|+++++|++|..||...+.......+.......+ ..++.++.+++.+||..
T Consensus 161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~ 238 (323)
T cd05615 161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP--KSLSKEAVSICKGLMTK 238 (323)
T ss_pred ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--ccCCHHHHHHHHHHccc
Confidence 4588999999999988899999999999999999999999999988888888877655443 36899999999999999
Q ss_pred CCCCCCC-----HHhhhcCcccccc
Q 023270 256 DSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps-----~~~il~~~~~~~~ 275 (284)
+|.+|++ .+++++||||+..
T Consensus 239 ~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 239 HPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CHhhCCCCCCCCHHHHhcCcccCCC
Confidence 9999997 4789999999974
No 67
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-48 Score=318.35 Aligned_cols=254 Identities=36% Similarity=0.671 Sum_probs=236.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|.+.+.||.|.||.|-+|.....|..||||.+.+..+...+..-.+++|+++|+.++||||+.++++|++.+.+.+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 47999999999999999999999999999999999988888888889999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHTM 176 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~~ 176 (284)
||..+|.|.+++...+.|++.+++.+++||+.|+.|+|+++++|+|||.+|||++.++++||.|||++..... -....
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF 212 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF 212 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999844433 33567
Q ss_pred cCCCcccCccccCCCCC-CchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
+|+|-|.+||+.++.+| .+..|-||||+++|-|..|.+||.+.+...+.+++..+.+..+. .|.+..-||+.||-.
T Consensus 213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmV 289 (668)
T KOG0611|consen 213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE---TPSDASGLIRWMLMV 289 (668)
T ss_pred cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC---CCchHHHHHHHHHhc
Confidence 89999999999999987 58999999999999999999999999999999999998765554 567889999999999
Q ss_pred CCCCCCCHHhhhcCcccccc
Q 023270 256 DSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~ 275 (284)
||++|.|+++|-.|=|+-=.
T Consensus 290 NP~RRATieDiAsHWWvNwg 309 (668)
T KOG0611|consen 290 NPERRATIEDIASHWWVNWG 309 (668)
T ss_pred CcccchhHHHHhhhheeecc
Confidence 99999999999999887533
No 68
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.1e-47 Score=324.29 Aligned_cols=249 Identities=31% Similarity=0.610 Sum_probs=212.4
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||.||++.+..+++.||+|++...........+.+..|+.++..+ +|+||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999776544444556777888887766 799999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 160 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223456889
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE---------SQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.|+|||++.+..++.++|+||||+++++|++|..||... ........+...... .+..++.++.+++++
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~ll~~ 238 (329)
T cd05618 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKS 238 (329)
T ss_pred cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC--CCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999521 122233334443333 334789999999999
Q ss_pred hcccCCCCCCC------HHhhhcCcccccc
Q 023270 252 LLVKDSSKRLS------LQKIMEHPWIIKN 275 (284)
Q Consensus 252 ~l~~~p~~Rps------~~~il~~~~~~~~ 275 (284)
||..||++||+ ++++++||||++.
T Consensus 239 ~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 239 FLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 99999999998 5799999999764
No 69
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9e-47 Score=322.74 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=218.2
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
+..++|++.++||.|+||.||++.+..++..+++|.+..... ......+.+|+++++.++|+||+++++++..++..+
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 556899999999999999999999999999999998755321 123457889999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccccCC-CC
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~ 173 (284)
+||||+++++|.+++...+.++...+..++.+++.|+.|||.. +++|+||+|+||+++.++.++|+|||++..... ..
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 159 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (333)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence 9999999999999999888899999999999999999999975 799999999999999999999999998754322 22
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHH-------------------------
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRI------------------------- 228 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~------------------------- 228 (284)
....++..|+|||++.+..++.++|+||||++++++++|..||............
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLS 239 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhh
Confidence 3346788999999999888999999999999999999999999765543332111
Q ss_pred -------------------HhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 229 -------------------MKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 229 -------------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
............++.++.+|+.+||..||.+|||+++++.||||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 240 SYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred hhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 111111111124678999999999999999999999999999998764
No 70
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.4e-47 Score=320.99 Aligned_cols=249 Identities=31% Similarity=0.591 Sum_probs=215.3
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh-CCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS-LRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||+||++.+..+++.||+|++................|..++.. .+||||+++++++..++.+++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999876543322333455566667765 4899999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~~~~~ 180 (284)
++|...+.....++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++... ........|++
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP 160 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence 999999988888999999999999999999999999999999999999999999999999987542 12223445889
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++|+||+|+++|+|++|..||...+..+....+....... +..++.++.+++.+||..||.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R 238 (316)
T cd05619 161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY--PRWLTREAKDILVKLFVREPERR 238 (316)
T ss_pred cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CccCCHHHHHHHHHHhccCHhhc
Confidence 9999999998889999999999999999999999999988888777766554332 33688999999999999999999
Q ss_pred CCHH-hhhcCcccccc
Q 023270 261 LSLQ-KIMEHPWIIKN 275 (284)
Q Consensus 261 ps~~-~il~~~~~~~~ 275 (284)
|++. ++++||||++.
T Consensus 239 ~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 239 LGVKGDIRQHPFFREI 254 (316)
T ss_pred CCChHHHHcCcccCCC
Confidence 9996 99999999875
No 71
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.7e-46 Score=310.70 Aligned_cols=254 Identities=28% Similarity=0.513 Sum_probs=222.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH--HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI--EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
.+|++.+.||.|++|.||++.+..++..|++|.+..... ......+.+.+|+.++++++|+||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 469999999999999999999999999999999864332 222335678899999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--- 173 (284)
++|++++++|.+++...+.++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 99999999999999988889999999999999999999999999999999999999999999999999874332211
Q ss_pred ---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 ---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....++..|+|||.+.+...+.++||||||++++++++|+.||...+.................+..++.++.++++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 241 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLR 241 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHH
Confidence 22346778999999999889999999999999999999999998877776666655554455555678999999999
Q ss_pred HhcccCCCCCCCHHhhhcCccc
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+||..+|.+|||+.++++||||
T Consensus 242 ~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 242 RTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHhhcCcccCCCHHHHhhCCCC
Confidence 9999999999999999999998
No 72
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.1e-47 Score=325.04 Aligned_cols=256 Identities=26% Similarity=0.436 Sum_probs=209.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----CeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD-----ERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~-----~~~ 94 (284)
+|++.+.||.|+||.||++.+..++..|++|.+....... .....+.+|+.+++.++|+||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 6999999999999999999999999999999986432221 2234677899999999999999999987543 358
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
|+||||++ ++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 99999996 689999988888999999999999999999999999999999999999999999999999998543211
Q ss_pred ----CccccCCCcccCccccCC--CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------
Q 023270 173 ----RHTMCGTLDYLAPEMVEN--KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV--------------- 231 (284)
Q Consensus 173 ----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--------------- 231 (284)
.....+++.|+|||++.+ ..++.++||||||+++++|++|..||...+.......+...
T Consensus 159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 238 (338)
T cd07859 159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE 238 (338)
T ss_pred ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 123457899999999865 56899999999999999999999999876543322211110
Q ss_pred -----------CCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 232 -----------DLSFP---SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 232 -----------~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
....+ ..+.+++++.+++.+||..||++|||++++++||||++...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 00000 01246788999999999999999999999999999977543
No 73
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.4e-47 Score=322.71 Aligned_cols=254 Identities=38% Similarity=0.651 Sum_probs=214.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHH-HHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIE-KYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~-~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~ 94 (284)
+|++.+.||+|+||+||++.+. .++..||+|++...... .....+.+..|+.++..+ +|++|+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999998864 46889999998654432 223445677899999999 489999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
++||||+++++|.+++.....+++..++.++.||+.||.|||+.|++|+||+|+|||++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~ 160 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK 160 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence 99999999999999998888899999999999999999999999999999999999999999999999998754321
Q ss_pred -CCccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 172 -KRHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAE----SQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 172 -~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
......|++.|+|||.+.+.. ++.++||||||+++++|++|..||... ........+.... ...+..+++.+
T Consensus 161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 238 (332)
T cd05614 161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD--PPFPSFIGPEA 238 (332)
T ss_pred CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHH
Confidence 222346899999999987654 788999999999999999999999643 2333444444333 33344789999
Q ss_pred HHHHHHhcccCCCCCC-----CHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
.+++.+||..||++|| +++++++||||++.
T Consensus 239 ~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 239 QDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999999999999999 88899999999874
No 74
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.3e-46 Score=320.07 Aligned_cols=257 Identities=33% Similarity=0.552 Sum_probs=218.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|+||+||++.+..+++.||+|++...........+.+.+|..++..++|+||+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999997655444445567888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---- 173 (284)
||+++++|.+++.+ ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS 160 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence 99999999999976 4578999999999999999999999999999999999999999999999999874432211
Q ss_pred ccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHH
Q 023270 174 HTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEA 245 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 245 (284)
....|++.|+|||++.. ..++.++||||+|+++|+|++|..||...+..+....+......... ...+++++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 240 (331)
T cd05597 161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEA 240 (331)
T ss_pred cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHH
Confidence 22358999999999863 44788999999999999999999999988887777776654322222 23579999
Q ss_pred HHHHHHhcccCCC--CCCCHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSS--KRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~--~Rps~~~il~~~~~~~~ 275 (284)
++++++||..+++ .|++++++++||||...
T Consensus 241 ~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 241 KDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999865443 37899999999999764
No 75
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.3e-46 Score=314.34 Aligned_cols=247 Identities=30% Similarity=0.467 Sum_probs=209.8
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||+|+||+||++.+..+++.|++|.+...........+.+..|+.+++.++|++++++.+++..++..++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999998765554444456677899999999999999999999999999999999999999
Q ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---CccccCC
Q 023270 107 YRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHTMCGT 179 (284)
Q Consensus 107 ~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~~~~~ 179 (284)
...+.. ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+...... .....++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence 887743 356899999999999999999999999999999999999999999999999987543221 2234678
Q ss_pred CcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 180 LDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKD----TFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
+.|+|||.+.+..++.++|+||||+++|+|++|..||....... ........ ....++.+++++.+++.+||+.
T Consensus 161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~ 238 (280)
T cd05608 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAK 238 (280)
T ss_pred cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcC
Confidence 89999999999999999999999999999999999997654322 22222222 2223346899999999999999
Q ss_pred CCCCCC-----CHHhhhcCcccccc
Q 023270 256 DSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
||++|| +++++++||||+..
T Consensus 239 ~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 239 DPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999 88999999999874
No 76
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.8e-46 Score=314.42 Aligned_cols=256 Identities=29% Similarity=0.442 Sum_probs=217.7
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
.|++.+.||.|+||+||++.+..+++.||+|++.............+.+|+.+++.++|++|+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48899999999999999999999999999999866544443344566789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCcc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~ 175 (284)
|+++++|.+.+... ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999999888654 4689999999999999999999999999999999999999999999999998854322 2223
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l 253 (284)
..+++.|+|||.+.+..++.++|+||+|+++|++++|..||.+.............. .....+..++..+.+|+.+||
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLL 240 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHc
Confidence 467899999999998889999999999999999999999998776544333332211 122233468999999999999
Q ss_pred ccCCCCCC-----CHHhhhcCcccccc
Q 023270 254 VKDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 254 ~~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
..||.+|| +++++++||||.+.
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 241 TKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred cCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 99999999 89999999999874
No 77
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-46 Score=325.73 Aligned_cols=255 Identities=25% Similarity=0.365 Sum_probs=210.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
..+...+|++.+.||.|+||.||+|.+..+++.||+|.... ..+.+|+++++.++||||+++++++..++.
T Consensus 87 ~~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~ 157 (391)
T PHA03212 87 AGIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKF 157 (391)
T ss_pred cccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCe
Confidence 34566789999999999999999999999999999997522 345689999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--- 170 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~--- 170 (284)
.++|+|++. ++|..++.....++...++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus 158 ~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 158 TCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred eEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999996 6898888887889999999999999999999999999999999999999999999999999985322
Q ss_pred -CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHh------------
Q 023270 171 -SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES-------QKDTFRRIMK------------ 230 (284)
Q Consensus 171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~-------~~~~~~~~~~------------ 230 (284)
.......|++.|+|||++.+..++.++||||||+++|+|++|..||-... ....+..+..
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 22233468999999999998899999999999999999999997764321 1111111110
Q ss_pred --------------cCCCCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 231 --------------VDLSFP-------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 231 --------------~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.....+ ....++.++.+||.+||..||++|||++++|+||||++.+.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 000000 001356789999999999999999999999999999997665
No 78
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.2e-47 Score=313.63 Aligned_cols=251 Identities=37% Similarity=0.676 Sum_probs=214.8
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++++.||+|+||+||++.+..+++.||+|++......... .....+|+..+++++|+||+++++++...+..+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 78999999999999999999999999999999877655543 23345599999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc---cCCCCcccc
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ---SRSKRHTMC 177 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~---~~~~~~~~~ 177 (284)
+++++|.+++...+.++...++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.. .........
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99889999999888899999999999999999999999999999999999999999999999999864 233344556
Q ss_pred CCCcccCccccC-CCCCCchhhHhhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHH
Q 023270 178 GTLDYLAPEMVE-NKEHDYAVDNWTLGILCYEFLYGAPPFEAES---QKDTFRRIMKVDLSFPS--APSISAEAKHLISR 251 (284)
Q Consensus 178 ~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 251 (284)
+++.|.|||.+. +...+.++|+||+|+++++|++|..||.... ......+.......... ....+.++.+++.+
T Consensus 160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 239 (260)
T PF00069_consen 160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKK 239 (260)
T ss_dssp SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHH
Confidence 788999999998 7889999999999999999999999999873 33333333322111111 11234899999999
Q ss_pred hcccCCCCCCCHHhhhcCccc
Q 023270 252 LLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~~~~ 272 (284)
||+.||++|||+.++++||||
T Consensus 240 ~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 240 MLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HSSSSGGGSTTHHHHHTSGGG
T ss_pred HccCChhHCcCHHHHhcCCCC
Confidence 999999999999999999998
No 79
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-47 Score=331.28 Aligned_cols=259 Identities=34% Similarity=0.609 Sum_probs=237.7
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDE 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~ 92 (284)
..+.+.+|.+++.||.|.||+|+++..+.+++.||||++++..+-.....+..+.|-+++.... ||.++.++..|...+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 5788999999999999999999999999999999999999988877777788888888887775 999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc---c
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ---S 169 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~---~ 169 (284)
++|+||||..||++.. +...+.+++..+.-++..++.||.|||++||+++|||.+|||+|.+|++||.|||++.. .
T Consensus 443 ~l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred eEEEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence 9999999999999443 44447799999999999999999999999999999999999999999999999999854 3
Q ss_pred CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 170 RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
++.+...+|||.|+|||++.+..|+.+.|.||||++||+|+.|..||.+.+.+++-..++.....++. .+|.+..+++
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~--~ls~ea~~il 599 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR--FLSKEAIAIM 599 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC--cccHHHHHHH
Confidence 45667788999999999999999999999999999999999999999999999999999988776666 6999999999
Q ss_pred HHhcccCCCCCCC-----HHhhhcCcccccc
Q 023270 250 SRLLVKDSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 250 ~~~l~~~p~~Rps-----~~~il~~~~~~~~ 275 (284)
+++|..+|++|.- +++|..||||+.-
T Consensus 600 ~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 600 RRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 9999999999994 6899999999863
No 80
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.3e-46 Score=317.23 Aligned_cols=259 Identities=39% Similarity=0.672 Sum_probs=227.7
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||+|++|+||+|.+..+++.|++|.+...........+.+..|++.++.++|+||+++++.+..++..++++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999997765554445677889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC----
Q 023270 99 EYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---- 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---- 172 (284)
||+.+++|.+++... ..+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999998764 46899999999999999999999999999999999999999999999999986432111
Q ss_pred ----------------------------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHH
Q 023270 173 ----------------------------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDT 224 (284)
Q Consensus 173 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~ 224 (284)
.....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 1123467789999999988899999999999999999999999998888877
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHhhhcCccccccCC
Q 023270 225 FRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLS----LQKIMEHPWIIKNAN 277 (284)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~~ 277 (284)
...........+....++.++.+++.+||..+|++||| +++++.||||++.+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 77777665555555558999999999999999999999 999999999998643
No 81
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.8e-47 Score=322.64 Aligned_cols=249 Identities=35% Similarity=0.658 Sum_probs=217.6
Q ss_pred eeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 24 GRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
++.||+|+||.||++.+. .+++.|++|++........ ....+..|++++++++|+||+++++++..++..|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVR-DRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhh-hHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 367999999999998864 5788999999976544332 234567789999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccccc
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHTMC 177 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~~~ 177 (284)
+++++|.+++.....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... .....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 159 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC 159 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence 999999999988888999999999999999999999999999999999999999999999999987543322 23346
Q ss_pred CCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCC
Q 023270 178 GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDS 257 (284)
Q Consensus 178 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (284)
|++.|+|||.+.+..++.++||||||+++++|++|..||...+..+....+....... +..+++++.+++++||+.||
T Consensus 160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~li~~~l~~~P 237 (318)
T cd05582 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGM--PQFLSPEAQSLLRALFKRNP 237 (318)
T ss_pred CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhhcCH
Confidence 7899999999998889999999999999999999999999988888888777665443 34689999999999999999
Q ss_pred CCCCC-----HHhhhcCcccccc
Q 023270 258 SKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 258 ~~Rps-----~~~il~~~~~~~~ 275 (284)
++||+ +++++.||||++.
T Consensus 238 ~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 238 ANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred hHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 7779999999763
No 82
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-47 Score=324.25 Aligned_cols=251 Identities=25% Similarity=0.443 Sum_probs=221.8
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
..+++....++.++.||+|-||.||.+... ....|++|.+....... +.+.+|+++|++++|++|+++++++..+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~----~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSP----EAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccCh----hHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 345566667889999999999999999974 44589999987654443 4677999999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 92 ERIFLILEYAHRGELYRELRK--HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+.++|||||++.|+|.++|+. ...++..+.+.++.||++|++||++++++|+||..+|||++.+..+||+|||+++..
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence 999999999999999999987 457999999999999999999999999999999999999999999999999999743
Q ss_pred CCCCc----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHH
Q 023270 170 RSKRH----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 170 ~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
..... ...-+..|+|||.+..+.++.+|||||||++|+|++| |+.|+.+.+..+.++.+.++ ...+.++.+|++
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G-yRlp~P~~CP~~ 432 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG-YRLPRPEGCPDE 432 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc-CcCCCCCCCCHH
Confidence 32221 1123567999999999999999999999999999998 99999999999999998887 477778899999
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhc
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+.+++..||..+|++|||++.+..
T Consensus 433 vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 433 VYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred HHHHHHHHhhCCcccCCCHHHHHH
Confidence 999999999999999999997654
No 83
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-46 Score=320.72 Aligned_cols=249 Identities=34% Similarity=0.628 Sum_probs=215.3
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHH-HHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREME-IQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~-~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||+||++.+..+++.|++|++.............+..|.. +++.++|+||+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999999999999999987654433333344444544 56779999999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP 160 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223445889
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++||||||+++++|++|..||...+..+........... ..+..+.++.+++++||..+|.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~ll~~~p~~R 238 (325)
T cd05604 161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLV--LRPGASLTAWSILEELLEKDRQRR 238 (325)
T ss_pred hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCcc--CCCCCCHHHHHHHHHHhccCHHhc
Confidence 999999999999999999999999999999999999998888888877765433 334689999999999999999999
Q ss_pred CCH----HhhhcCcccccc
Q 023270 261 LSL----QKIMEHPWIIKN 275 (284)
Q Consensus 261 ps~----~~il~~~~~~~~ 275 (284)
|++ +++++||||...
T Consensus 239 ~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 239 LGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCHHHHhcCCCcCCC
Confidence 977 599999999853
No 84
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.4e-46 Score=318.72 Aligned_cols=248 Identities=34% Similarity=0.609 Sum_probs=214.4
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHH-HHHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREM-EIQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~-~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|+||.||+|.+..+++.|++|++.............+..|. .+++.++|+||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999999765544333334444554 467889999999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......+++
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP 160 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875422 2223345789
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+...... .++..+.++.+++.+||..+|.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R 238 (321)
T cd05603 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQ--LPGGKTVAACDLLVGLLHKDQRRR 238 (321)
T ss_pred ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccCCHhhc
Confidence 999999999888999999999999999999999999998888777777765433 334688999999999999999999
Q ss_pred CCH----HhhhcCccccc
Q 023270 261 LSL----QKIMEHPWIIK 274 (284)
Q Consensus 261 ps~----~~il~~~~~~~ 274 (284)
|++ .++++|+||..
T Consensus 239 ~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 239 LGAKADFLEIKNHVFFSP 256 (321)
T ss_pred CCCCCCHHHHhCCCCcCC
Confidence 976 49999999975
No 85
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-46 Score=324.45 Aligned_cols=257 Identities=27% Similarity=0.413 Sum_probs=214.1
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-----eE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE-----RI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~-----~~ 94 (284)
+|++.+.||.|+||.||++.+..+++.||+|.+....... ...+.+.+|+.+++.++|+||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-VSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-HHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 5889999999999999999999999999999985432222 23456778999999999999999999998776 78
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
++|+||+. ++|...+.....++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~ 158 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES 158 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence 99999997 588888888888999999999999999999999999999999999999999999999999988543221
Q ss_pred --CccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc------------------
Q 023270 173 --RHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV------------------ 231 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~------------------ 231 (284)
.....+++.|+|||.+.+.. ++.++||||+|+++++|++|+.||...+.......+...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 238 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARA 238 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence 12234678899999987754 789999999999999999999999887766554443221
Q ss_pred -----CCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 232 -----DLSF-------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 232 -----~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.... ......++++.+||.+||..||++|||++++|+||||++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 297 (372)
T cd07853 239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLR 297 (372)
T ss_pred HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcch
Confidence 0000 1123457899999999999999999999999999999986543
No 86
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-48 Score=302.81 Aligned_cols=260 Identities=33% Similarity=0.578 Sum_probs=232.7
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-----HHHHHHHHHHHHHHHHHhC-CCCcccceeeEE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-----EKYKIQHQLRREMEIQSSL-RHPNILRLYGWF 88 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~ 88 (284)
....+.|.-.++||.|..++|-++.+..+++.+++|++..... ......+.-++|+.+++++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 3456789999999999999999999999999999998753221 1344566777899999988 599999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+.+...++|+|.|+.|.|.+++.+--.++++..+++++|+++++.|||..+|+|+|+||+|||++++-+++|+|||+++.
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999966
Q ss_pred cC--CCCccccCCCcccCccccC------CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC--
Q 023270 169 SR--SKRHTMCGTLDYLAPEMVE------NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA-- 238 (284)
Q Consensus 169 ~~--~~~~~~~~~~~y~aPE~~~------~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 238 (284)
.. ..-...+|||+|+|||.+. ...++...|+|+.|++||-|+.|.+||...-..-.++-++.+...+.++
T Consensus 173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 54 3445678999999999884 3457889999999999999999999999998888999999998877664
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 239 PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
.+++.+.++||++||+.||.+|.|++++|+||||++
T Consensus 253 adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 253 ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 589999999999999999999999999999999943
No 87
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.3e-46 Score=317.85 Aligned_cols=249 Identities=30% Similarity=0.582 Sum_probs=213.6
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||.||++.+..+++.||+|++...........+.+.+|..++.++ +|++|+++++.+...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999999999999999999876555555567788898888888 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~~~~~ 180 (284)
++|...+...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++... ........|++
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP 160 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence 999999988888999999999999999999999999999999999999999999999999987542 22223456899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC------C-hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE------S-QKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
.|+|||++.+..++.++|+||||+++++|++|..||... . .......+..... ..+..++..+.+++++||
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L 238 (327)
T cd05617 161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--RIPRFLSVKASHVLKGFL 238 (327)
T ss_pred ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999532 1 2223333333322 234468899999999999
Q ss_pred ccCCCCCCC------HHhhhcCcccccc
Q 023270 254 VKDSSKRLS------LQKIMEHPWIIKN 275 (284)
Q Consensus 254 ~~~p~~Rps------~~~il~~~~~~~~ 275 (284)
..||++|++ ++++++||||+..
T Consensus 239 ~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 239 NKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred ccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999999998 5799999999864
No 88
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.7e-46 Score=320.28 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=209.1
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC---
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE--- 92 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~--- 92 (284)
...++|++.+.||.|+||.||++.+..++..||+|++....... .....+.+|+.+++.++|+||+++++++...+
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch-hHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 35689999999999999999999999999999999986543222 23456678999999999999999999886443
Q ss_pred ---eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 93 ---RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 93 ---~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
..++||||+++ +|...+.. .++...+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 57999999975 66665543 4788999999999999999999999999999999999999999999999998543
Q ss_pred CC--CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC---------------
Q 023270 170 RS--KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--------------- 232 (284)
Q Consensus 170 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--------------- 232 (284)
.. ......+++.|+|||.+.+..++.++||||||+++|+|++|..||...+....+.......
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 22 2233467889999999999999999999999999999999999998776544333222110
Q ss_pred -------CCCC------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 233 -------LSFP------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 233 -------~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
...+ .....++++++||.+||..||++|||++++|+||||+.-.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 322 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY 322 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence 0000 0112467899999999999999999999999999998643
No 89
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.2e-46 Score=315.09 Aligned_cols=259 Identities=27% Similarity=0.478 Sum_probs=214.7
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
-++.+|.+.+.||.|+||.||++.+..++..|++|.+....... ....+.+|+.+++.++|+|++++++++..++..+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (309)
T cd07872 3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLT 80 (309)
T ss_pred CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEE
Confidence 46788999999999999999999999999999999986443221 2235667999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 96 LILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
+||||+++ +|..++... ..++...+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++......
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 99999975 787777654 45899999999999999999999999999999999999999999999999987543222
Q ss_pred -CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----------------
Q 023270 173 -RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS---------------- 234 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---------------- 234 (284)
.....+++.|+|||.+.+ ..++.++||||||+++++|++|..||...+..+....+......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 223456888999998865 45889999999999999999999999887765554443321100
Q ss_pred ------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 235 ------------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 235 ------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
....+.+++++.++|.+||..||.+|||++++++||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 0111357889999999999999999999999999999998643
No 90
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.1e-46 Score=317.77 Aligned_cols=248 Identities=35% Similarity=0.659 Sum_probs=214.1
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHH-HHHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREM-EIQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~-~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||+|+||+||+|.+..+++.|++|++.............+..+. .+++.++|+||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999999765443333333444443 456788999999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|.+++.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 160 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP 160 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875322 2223446899
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
.|+|||++.+..++.++||||||+++++|++|..||...+..+.+..+...... ..+.+++.+.+++++||..+|.+|
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R 238 (325)
T cd05602 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ--LKPNITNSARHLLEGLLQKDRTKR 238 (325)
T ss_pred cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcC--CCCCCCHHHHHHHHHHcccCHHHC
Confidence 999999999999999999999999999999999999998888887777665433 334789999999999999999999
Q ss_pred CCHH----hhhcCccccc
Q 023270 261 LSLQ----KIMEHPWIIK 274 (284)
Q Consensus 261 ps~~----~il~~~~~~~ 274 (284)
|++. ++++|+||..
T Consensus 239 ~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 239 LGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred CCCCCCHHHHhcCcccCC
Confidence 9876 8999999964
No 91
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.8e-46 Score=323.42 Aligned_cols=259 Identities=31% Similarity=0.506 Sum_probs=213.2
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
....+.+|++.+.||.|+||.||++.+..+++.|++|++.... .......+.+|+++++.++|+||+++++++..++.
T Consensus 69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE 146 (353)
T ss_pred CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence 4456788999999999999999999999999999999985433 22334678899999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-- 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-- 171 (284)
+++|+||+++++|... ...++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 147 ~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 9999999999888643 2346788889999999999999999999999999999999999999999998754322
Q ss_pred -CCccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHH---HHHHHHhcCCCCCCCCCCC
Q 023270 172 -KRHTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKD---TFRRIMKVDLSFPSAPSIS 242 (284)
Q Consensus 172 -~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (284)
......|+..|+|||.+.. ...+.++||||||+++|+|++|+.||......+ ....... .........++
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 301 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-SQPPEAPATAS 301 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-cCCCCCCCccC
Confidence 2234568899999998743 223568999999999999999999997443322 2222221 22233344788
Q ss_pred HHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 243 AEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
.++.+||.+||..||++|||++++++||||.+.+.+.
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~~ 338 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQ 338 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcccccCCccc
Confidence 9999999999999999999999999999999986654
No 92
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-46 Score=321.14 Aligned_cols=248 Identities=35% Similarity=0.609 Sum_probs=212.7
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC---CCCcccceeeEEecCCeEEEEEeecCC
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL---RHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l---~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
||+|+||+||+|.+..+++.||+|++................+..++... +|++|+++++.+..++..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999998765443333333444555555544 699999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCccccCCC
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTL 180 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~~~~~~ 180 (284)
++|...+...+.+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.... .......|++
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~ 160 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT 160 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence 9999999888889999999999999999999999999999999999999999999999999875322 2223456899
Q ss_pred cccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 023270 181 DYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSK 259 (284)
Q Consensus 181 ~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 259 (284)
.|+|||.+.+. .++.++||||||+++|+|++|..||...+..+....+..+....+. ..+++++.+++++||..||.+
T Consensus 161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~~L~~~P~~ 239 (330)
T cd05586 161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-NVLSDEGRQFVKGLLNRNPQH 239 (330)
T ss_pred cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCCHHH
Confidence 99999998765 4789999999999999999999999998888888877766554443 357899999999999999999
Q ss_pred CC----CHHhhhcCcccccc
Q 023270 260 RL----SLQKIMEHPWIIKN 275 (284)
Q Consensus 260 Rp----s~~~il~~~~~~~~ 275 (284)
|| +++++++||||.+.
T Consensus 240 R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 240 RLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCCCCCHHHHhcCccccCC
Confidence 98 79999999999864
No 93
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-47 Score=321.42 Aligned_cols=255 Identities=28% Similarity=0.519 Sum_probs=234.8
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe-EE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER-IF 95 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~-~~ 95 (284)
.+.+|.+++.+|.|+||.+++++++.+++.|++|.+......... .+...+|+.++++++||||+.+.+.|.+++. .+
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 367899999999999999999999999999999999776655544 3477899999999999999999999999887 99
Q ss_pred EEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC
Q 023270 96 LILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 173 (284)
|||+||+||++...+.+.+ .++++.+..++.|++.|+.|||++.|+|+||++.||+++.++.|+|+|||++....+..
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999999998764 68999999999999999999999999999999999999999999999999997665543
Q ss_pred ---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 ---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....||+.|++||.+.+.+|..++|||||||++|++++-+++|...+...+..++.... ..+.+...+.+++.+|+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~ 239 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVK 239 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHH
Confidence 55679999999999999999999999999999999999999999999999999999987 55566689999999999
Q ss_pred HhcccCCCCCCCHHhhhcCcccc
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
.||..+|+.||++.++|.+|..+
T Consensus 240 ~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 240 SMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred HHhhcCCccCCCHHHHhhChhhh
Confidence 99999999999999999998776
No 94
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-46 Score=309.58 Aligned_cols=256 Identities=20% Similarity=0.248 Sum_probs=222.2
Q ss_pred hcccccccCcEee--eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 12 RKREWSLQDFEIG--RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 12 ~~~~~~~~~y~~~--~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
....+...+++.. ..||+|+++.||++.+ +++.||+|++...........+.+.+|+.++++++|+||+++++++.
T Consensus 11 ~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~ 88 (283)
T PHA02988 11 DIKCIESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFII 88 (283)
T ss_pred cceecCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence 3445566666666 7799999999999987 68899999997665545455678889999999999999999999987
Q ss_pred c----CCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecc
Q 023270 90 D----DERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFG 164 (284)
Q Consensus 90 ~----~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~ 164 (284)
+ ....++|+||+++|+|.+++.+.+.++....+.++.+++.|+.+||+. +++|+||+|+||+++.++.+||+|||
T Consensus 89 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg 168 (283)
T PHA02988 89 DIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHG 168 (283)
T ss_pred ecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccc
Confidence 6 347899999999999999999888899999999999999999999984 99999999999999999999999999
Q ss_pred cccccCCCCccccCCCcccCccccCC--CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q 023270 165 WSVQSRSKRHTMCGTLDYLAPEMVEN--KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSIS 242 (284)
Q Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
++...........++..|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+...........+..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (283)
T PHA02988 169 LEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCP 248 (283)
T ss_pred hHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCc
Confidence 98655444445567889999999976 6789999999999999999999999999888888887766655555555789
Q ss_pred HHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 243 AEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+++.+||+.||++|||++++++.
T Consensus 249 ~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 249 LEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 999999999999999999999999863
No 95
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-45 Score=315.60 Aligned_cols=257 Identities=32% Similarity=0.556 Sum_probs=219.3
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|+||+||++.+..+++.|++|++.............+..|+.++..++|++++++++.+..++.+++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999987654444444566788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC----CC
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS----KR 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~----~~ 173 (284)
||+++++|.+++.+. ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++..... ..
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence 999999999999874 6789999999999999999999999999999999999999999999999998743221 11
Q ss_pred ccccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHH
Q 023270 174 HTMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEA 245 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 245 (284)
....|++.|+|||++. ...++.++||||||+++|+|++|..||...+..+....+......... ...+++++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~ 240 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDA 240 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHH
Confidence 2346899999999986 345788999999999999999999999998888888877665433222 23579999
Q ss_pred HHHHHHhcccCCC--CCCCHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSS--KRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~--~Rps~~~il~~~~~~~~ 275 (284)
++|+++||..++. .|++++++++||||+..
T Consensus 241 ~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 241 KDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999965443 47899999999999864
No 96
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-45 Score=315.93 Aligned_cols=257 Identities=32% Similarity=0.541 Sum_probs=219.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|+||+||++.+..+++.||+|++.............+.+|..++..++|++|+++++++..++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999987654444444566788899999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---- 173 (284)
||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 160 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS 160 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence 99999999999987 4678999999999999999999999999999999999999999999999999875433221
Q ss_pred ccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHH
Q 023270 174 HTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEA 245 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 245 (284)
....|++.|+|||++.+ +.++.++|+||||+++|+|++|..||...+..+....+......... ...++.++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~ 240 (331)
T cd05624 161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEA 240 (331)
T ss_pred ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHH
Confidence 22458999999999865 45788999999999999999999999988888777777654332222 23578999
Q ss_pred HHHHHHhcccCCCC--CCCHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSSK--RLSLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~~--Rps~~~il~~~~~~~~ 275 (284)
++++.+||...+++ |++++++++||||+..
T Consensus 241 ~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 241 KDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred HHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 99999999865544 5699999999999863
No 97
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.7e-46 Score=312.00 Aligned_cols=252 Identities=26% Similarity=0.434 Sum_probs=204.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEec-CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh---CCCCcccceeeEEe-----
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVE-SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS---LRHPNILRLYGWFH----- 89 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~---l~h~~i~~~~~~~~----- 89 (284)
++|++.+.||.|+||+||+|.+.. ++..||+|.+........ ....+.+|+..++. ++|+||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 589999999999999999999854 467899998864332211 11233445555554 47999999999875
Q ss_pred cCCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
....+++|+|+++ ++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 3456899999997 5898888764 358999999999999999999999999999999999999999999999999985
Q ss_pred ccCC--CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---------
Q 023270 168 QSRS--KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP--------- 236 (284)
Q Consensus 168 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 236 (284)
.... ......+++.|+|||.+.+..++.++||||||+++++|++|.+||.+.+..+.+..+........
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 4332 22344578999999999888899999999999999999999999999888777766654211000
Q ss_pred ----------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 237 ----------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 237 ----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
..+.+++.+.+++.+||..||++|||+.++|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 013567889999999999999999999999999998
No 98
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=9.8e-46 Score=308.09 Aligned_cols=255 Identities=32% Similarity=0.489 Sum_probs=221.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|++|.||++.+..+++.|++|.+...... .....+.+|+++++.++|+|++++++++.++...++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE--DEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc--hHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 4799999999999999999999999999999998654322 23456788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~ 175 (284)
|++++++|.+++... .++...++.++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 999999999998875 7899999999999999999999999999999999999999999999999987554322 233
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..+++.|+|||.+.+..++.++|+||||++++++++|..||...+.......+............++.++.+++.+||..
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 237 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNK 237 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhC
Confidence 45678899999999888999999999999999999999999887766666555554332222223789999999999999
Q ss_pred CCCCCCCHHhhhcCccccccC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~ 276 (284)
+|.+|||++++++||||++..
T Consensus 238 ~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 238 DPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred ChhhCcCHHHHhhChhhcCCC
Confidence 999999999999999999864
No 99
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.4e-46 Score=318.56 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=214.5
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC----
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD---- 91 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~---- 91 (284)
-...+|++.+.||.|+||+||++.+..+++.||+|.+....... .....+.+|+.+++.++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh-HHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34578999999999999999999999999999999986543322 2335567899999999999999999987533
Q ss_pred --CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 92 --ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 92 --~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
...+++++++ +++|..++.. ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 3579999998 5688877654 56899999999999999999999999999999999999999999999999998766
Q ss_pred CCCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-------------
Q 023270 170 RSKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF------------- 235 (284)
Q Consensus 170 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 235 (284)
........+++.|+|||++.+ ..++.++||||||+++++|++|..||...+..+.+..+.......
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 555555678999999999877 468899999999999999999999998776655444433211000
Q ss_pred ----------CC------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 236 ----------PS------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 236 ----------~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
+. ....++.+.+|+.+||..||.+|||++++|+||||.+...+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCC
Confidence 00 01356678999999999999999999999999999986554
No 100
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-46 Score=324.29 Aligned_cols=253 Identities=28% Similarity=0.456 Sum_probs=220.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-C-----CcccceeeEEecCCe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-H-----PNILRLYGWFHDDER 93 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h-----~~i~~~~~~~~~~~~ 93 (284)
+|.|++.||.|+||.|.+|.+..+++.||||+++.... ..++...|+.+|..++ | -|+++++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~----f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR----FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH----HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 79999999999999999999999999999999966442 3355667888888886 3 489999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC--CEEEeeccccccc
Q 023270 94 IFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG--RLKIGDFGWSVQS 169 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~--~~~l~d~~~~~~~ 169 (284)
+|+|+|..+ .+|.++++.++ .++...++.++.||+.||..||+.||+|+||||+|||+...+ .+|++|||.++..
T Consensus 263 lciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 999999997 59999999874 689999999999999999999999999999999999997654 6999999999888
Q ss_pred CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC------------
Q 023270 170 RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS------------ 237 (284)
Q Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 237 (284)
......+..+-.|+|||++.+.+++.+.||||||||++||++|.+.|.+.+..+.+..+......++.
T Consensus 342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kf 421 (586)
T KOG0667|consen 342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKF 421 (586)
T ss_pred CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccccee
Confidence 87777888899999999999999999999999999999999999999998888877776654221111
Q ss_pred -------------------------------------CC------------CCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 238 -------------------------------------AP------------SISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 238 -------------------------------------~~------------~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+ .-...+.+||.+||.+||.+|+|+.++|+
T Consensus 422 f~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 422 FTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN 501 (586)
T ss_pred hhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 01235789999999999999999999999
Q ss_pred CccccccCC
Q 023270 269 HPWIIKNAN 277 (284)
Q Consensus 269 ~~~~~~~~~ 277 (284)
||||+....
T Consensus 502 Hpfl~~~~~ 510 (586)
T KOG0667|consen 502 HPFLTGTSL 510 (586)
T ss_pred Ccccccccc
Confidence 999995433
No 101
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.1e-45 Score=326.43 Aligned_cols=254 Identities=26% Similarity=0.450 Sum_probs=206.8
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC----
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD---- 91 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~---- 91 (284)
....+|++.+.||+|+||.||+|.+..++..||||++.... ....+|+.+++.++|+||+++++++...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 34568999999999999999999999999999999885432 1234688999999999999999876432
Q ss_pred ----CeEEEEEeecCCCchHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEee
Q 023270 92 ----ERIFLILEYAHRGELYRELR----KHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGD 162 (284)
Q Consensus 92 ----~~~~~v~e~~~~~~L~~~l~----~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d 162 (284)
..+++||||+++ ++..++. ....++...++.++.||+.||.|||+.||+|+||||+||+++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence 257799999975 7766664 345789999999999999999999999999999999999998765 799999
Q ss_pred cccccccC--CCCccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------
Q 023270 163 FGWSVQSR--SKRHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL------ 233 (284)
Q Consensus 163 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------ 233 (284)
||++.... .......+++.|+|||++.+. .++.++|||||||++++|++|.+||.+.+..+.+.++.....
T Consensus 215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 215 FGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294 (440)
T ss_pred cccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 99985432 222345678999999998764 589999999999999999999999998877665555443110
Q ss_pred -----------CCC----------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 234 -----------SFP----------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 234 -----------~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
.++ .+...++++.+||++||..||.+|||+.++|+||||++..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 001 11246789999999999999999999999999999987644
No 102
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.1e-45 Score=308.44 Aligned_cols=257 Identities=30% Similarity=0.566 Sum_probs=224.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|+||.||++.+..+++.|++|.+.............+.+|+.+++.++|+||+++++.+..++..++|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999987655444444567888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-------
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS------- 171 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~------- 171 (284)
||+++++|.+++...+.+++..+..++.+++.|+.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 9999999999998888899999999999999999999999999999999999999999999999998642110
Q ss_pred -----------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC-C
Q 023270 172 -----------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA-P 239 (284)
Q Consensus 172 -----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (284)
......++..|+|||.+.+..++.++|+||||++++++++|..||.+.+..+............+.. .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE 240 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccc
Confidence 0011245778999999988889999999999999999999999999888888777776654443333 2
Q ss_pred CCCHHHHHHHHHhcccCCCCCCC---HHhhhcCcccccc
Q 023270 240 SISAEAKHLISRLLVKDSSKRLS---LQKIMEHPWIIKN 275 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps---~~~il~~~~~~~~ 275 (284)
.+++++.+++.+||..+|.+||+ +.++|+||||+..
T Consensus 241 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 241 ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 57899999999999999999997 7999999999764
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-45 Score=328.69 Aligned_cols=254 Identities=26% Similarity=0.481 Sum_probs=220.9
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecC-CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVES-KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
....|.+.+.||.|++|.||+|.+..+ +..|++|.+..... .....++.|+..++.++|+||+++++++..++..|
T Consensus 65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~---~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~ 141 (478)
T PTZ00267 65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE---RQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL 141 (478)
T ss_pred cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE
Confidence 344599999999999999999998877 77888987744322 23356778999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 96 LILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
+||||+++++|.+.+.. ..++++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 99999999999987754 34689999999999999999999999999999999999999999999999999854332
Q ss_pred C-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 172 K-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 172 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
. .....|++.|+|||++.+..++.++||||||+++++|++|..||...+..+.+.....+... +.+..+++++.
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~ 300 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD-PFPCPVSSGMK 300 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCccCCHHHH
Confidence 2 23345899999999999999999999999999999999999999998888888887765443 23346889999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
++|..||..+|++||++++++.|||++.
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999999999999999864
No 104
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.3e-45 Score=311.44 Aligned_cols=260 Identities=28% Similarity=0.494 Sum_probs=216.0
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
-++.+|.+.+.||.|++|.||++.+..++..|++|.+....... ....+.+|+..++.++|+||+++++++..++..+
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT 80 (301)
T ss_pred ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence 46789999999999999999999999999999999985433211 1235667999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 96 LILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
+|+||++ ++|..++... ..++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 9999997 5888887654 56899999999999999999999999999999999999999999999999987543221
Q ss_pred -CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----------------
Q 023270 173 -RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS---------------- 234 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---------------- 234 (284)
.....+++.|+|||.+.+. .++.++||||||+++++|++|.+||...+..+....+......
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 1233467889999988654 4788999999999999999999999887766555443321100
Q ss_pred ---CC---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 235 ---FP---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 235 ---~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.+ ..+.+++++.+||.+||..||++|||++++++||||+...++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 00 113578899999999999999999999999999999987654
No 105
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-46 Score=303.53 Aligned_cols=259 Identities=29% Similarity=0.478 Sum_probs=221.8
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc-ccceeeEEecCC----
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN-ILRLYGWFHDDE---- 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~-i~~~~~~~~~~~---- 92 (284)
+..|..+++||+|+||+||+|+...+|+.||+|++...... +.......+|+.+++.++|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 67789999999999999999999999999999998665432 223456678999999999999 999999998777
Q ss_pred --eEEEEEeecCCCchHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 93 --RIFLILEYAHRGELYRELRKHR----RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 93 --~~~~v~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+++|+||++. +|..++.... .++...++.+++||+.|+.|||++||+|+||||.||+++++|.+||+|||++
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999975 9999998765 5788899999999999999999999999999999999999999999999998
Q ss_pred cccCCC---CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCC--
Q 023270 167 VQSRSK---RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--PSA-- 238 (284)
Q Consensus 167 ~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~-- 238 (284)
....-+ .....+|.+|+|||++.+. .++...||||+||++++|+++...|.+.+..+++..+......+ ..+
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 654422 2344578899999999988 58999999999999999999999999999988888776642111 111
Q ss_pred ------------------------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 239 ------------------------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 239 ------------------------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
+..+++..+++.+||+.+|.+|.|++.+|.||||+....+
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK 311 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence 1223578999999999999999999999999999998654
No 106
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.6e-45 Score=300.84 Aligned_cols=251 Identities=31% Similarity=0.499 Sum_probs=220.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|.+.+.||+|++|.||++.+..+++.|++|.+....... .....+.+|+++++.++|+|++++++++..++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR-REREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH-HHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 5899999999999999999999999999999986544333 334678889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---c
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---H 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~ 174 (284)
|+++++|.+++... ..++...++.++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||++....... .
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999999775 578999999999999999999999999999999999999999999999999875433221 2
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...+++.|+|||.+.+..++.++|+||||+++++|++|..||...+............... ....++.++.+++.+||+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~ 238 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP-VSQMYSQQLAQLIDQCLT 238 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-CccccCHHHHHHHHHHcc
Confidence 3357788999999999889999999999999999999999999888777777766654333 333688999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|++||++.++++|||+
T Consensus 239 ~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 239 KDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCcccCcCHHHHhhCCCC
Confidence 999999999999999995
No 107
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-45 Score=329.21 Aligned_cols=262 Identities=30% Similarity=0.485 Sum_probs=224.8
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
..+.+....+|++.+.||+|+||+||++.+..+++.||+|++....... .....+.+|+..+..++|++++++++.+..
T Consensus 24 ~~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 24 EATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE-ADKNRAQAEVCCLLNCDFFSIVKCHEDFAK 102 (496)
T ss_pred cccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence 3445556689999999999999999999999999999999986654433 234567789999999999999998887643
Q ss_pred CC--------eEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCE
Q 023270 91 DE--------RIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 91 ~~--------~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~ 158 (284)
.+ .+++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCE
Confidence 22 478999999999999988653 468999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCC-----CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC
Q 023270 159 KIGDFGWSVQSRS-----KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL 233 (284)
Q Consensus 159 ~l~d~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~ 233 (284)
+|+|||++..... ......|++.|+|||++.+..++.++||||||+++|+|++|..||...+..+.......+..
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~ 262 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY 262 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 9999999754321 22345689999999999999999999999999999999999999999988888887776543
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 234 SFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
. +.++.+++++.+++.+||..||.+||++.++++|||++.
T Consensus 263 ~-~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 263 D-PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred C-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 3 344578999999999999999999999999999999875
No 108
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.8e-45 Score=310.41 Aligned_cols=258 Identities=28% Similarity=0.411 Sum_probs=216.3
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|+||.||++.+..++..+++|.+..... ......+.+|+++++.++|+||+++++.+..++..++|+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK--PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 479999999999999999999999999999999864322 223456788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccCC-CCccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KRHTM 176 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~~~~ 176 (284)
||+++++|.+++...+.++...+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 999999999999988889999999999999999999997 5999999999999999999999999998744322 22344
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC------------------------
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD------------------------ 232 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------------------------ 232 (284)
.++..|+|||.+.+..++.++|+||||++++++++|..||...+............
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 57889999999988889999999999999999999999997655433222211110
Q ss_pred ------------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 233 ------------LSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 233 ------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
........++.++.+++.+||..+|.+|||++++++||||++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 296 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE 296 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence 0000111367889999999999999999999999999999987544
No 109
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-45 Score=307.95 Aligned_cols=248 Identities=26% Similarity=0.433 Sum_probs=207.6
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|+||+||++.+..+++.|++|.+.............+..|+++++.++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999998654443333334556789999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--CccccCCCcc
Q 023270 107 YRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RHTMCGTLDY 182 (284)
Q Consensus 107 ~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~y 182 (284)
.+.+.... .++...+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... .....+++.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY 160 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence 98886543 5889999999999999999999999999999999999999999999999987543322 1234578899
Q ss_pred cCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 183 LAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ----KDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 183 ~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
+|||++.+..++.++|+||+|+++|+|++|..||..... .............. ....+++++++++++||+.||.
T Consensus 161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~ 239 (277)
T cd05607 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKDICRLFLAKKPE 239 (277)
T ss_pred cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHHHHHHHhccCHh
Confidence 999999988899999999999999999999999976433 23333333322222 2236899999999999999999
Q ss_pred CCCCH----HhhhcCcccccc
Q 023270 259 KRLSL----QKIMEHPWIIKN 275 (284)
Q Consensus 259 ~Rps~----~~il~~~~~~~~ 275 (284)
+||++ ++++.||||+..
T Consensus 240 ~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 240 DRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred hCCCCccchhhhhcChhhcCC
Confidence 99999 778899999764
No 110
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.1e-45 Score=305.18 Aligned_cols=251 Identities=32% Similarity=0.566 Sum_probs=220.7
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..+++.|++|++...........+.+.+|++.+++++|+|++++++.+.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999998999999999976655444556788999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--Ccccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RHTMC 177 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~~~ 177 (284)
|+.+++|.+.+....+++...+..++.|++++|.+||+.|++|+||+|+||+++.++.++|+|||++...... .....
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 160 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence 9999999999988778999999999999999999999999999999999999999999999999987544332 23345
Q ss_pred CCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 178 GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ---KDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 178 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
++..|+|||.+.+...+.++|+||||++++++++|..||...+. ......... .....++..+.++.++|++||.
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~ 238 (258)
T cd05578 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLE 238 (258)
T ss_pred CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHcc
Confidence 77889999999888899999999999999999999999987764 333333322 3344445788999999999999
Q ss_pred cCCCCCCCH--HhhhcCccc
Q 023270 255 KDSSKRLSL--QKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~--~~il~~~~~ 272 (284)
.||.+||++ .++++||||
T Consensus 239 ~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 239 RDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred CChhHcCCccHHHHhcCCCC
Confidence 999999999 999999998
No 111
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-48 Score=319.65 Aligned_cols=254 Identities=29% Similarity=0.462 Sum_probs=226.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|.....||.|.||.||++.+..+++.||+|++....... ....+++|+.++..++++||.+.++.+..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 45777799999999999999999999999999997665433 3578889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---CCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~---~~~~~ 175 (284)
|||.+|++.+.++....+++..+..++++++.|+.|||.++.+|+||++.||++..+|.++|.|||.+.... .....
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 999999999999998888999999999999999999999999999999999999999999999999985443 33366
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..|||.|+|||+.....|+.++||||||++.++|.+|.+|+....+...+.-+.+..++.- ...+++.+++||..||+.
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L-~~~~S~~~kEFV~~CL~k 249 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL-DGDFSPPFKEFVEACLDK 249 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc-ccccCHHHHHHHHHHhhc
Confidence 7899999999999988999999999999999999999999999888655555554433222 237899999999999999
Q ss_pred CCCCCCCHHhhhcCcccccc
Q 023270 256 DSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~ 275 (284)
||+.||||.++|.|+|+++.
T Consensus 250 ~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 250 NPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred CcccCcCHHHHhhhHHHHhc
Confidence 99999999999999999983
No 112
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.2e-45 Score=303.81 Aligned_cols=252 Identities=30% Similarity=0.502 Sum_probs=217.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH------HHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE------KYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~------~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
+|.+.+.||.|++|.||+|.+..+++.|++|.+...... .....+.+.+|+.++++++|+|++++++++..++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 578899999999999999999889999999988543221 22344678899999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
.++++||+++++|.+++.+.+.++...+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 9999999999999999988888999999999999999999999999999999999999999999999999987443311
Q ss_pred --------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHH
Q 023270 173 --------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 173 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
.....++..|+|||.+.+..++.++|+||+|+++++|++|..||...+........... .....+..++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN-ASPEIPSNISSE 239 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-CCCcCCcccCHH
Confidence 11234678899999999888999999999999999999999999887766655554442 223334468899
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+.+++++||+++|.+||+++++++||||
T Consensus 240 ~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 240 AIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999999999999999998
No 113
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-45 Score=327.62 Aligned_cols=254 Identities=26% Similarity=0.439 Sum_probs=204.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC------CCcccceeeEEec
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR------HPNILRLYGWFHD 90 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~------h~~i~~~~~~~~~ 90 (284)
..++|++++.||.|+||+||+|.+..+++.||||++..... ..+....|+++++.++ |.+++++++++..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK----YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh----hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 45789999999999999999999999999999999854221 1223344555555554 4568888888875
Q ss_pred C-CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCC------------
Q 023270 91 D-ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEG------------ 156 (284)
Q Consensus 91 ~-~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~------------ 156 (284)
+ +++++|+|++ +++|.+++...+.++...+..++.||+.||.|||. .||+|+||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 5 5789999998 56898888888889999999999999999999998 5999999999999998765
Q ss_pred ----CEEEeecccccccCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Q 023270 157 ----RLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD 232 (284)
Q Consensus 157 ----~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 232 (284)
.+||+|||.+...........+++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+....
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 4999999987655555556678999999999999999999999999999999999999998877655444332211
Q ss_pred CCCC-------------------------C---------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 233 LSFP-------------------------S---------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 233 ~~~~-------------------------~---------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
..++ . ....++.+.+||.+||..||++|||++|+|+||||
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 1000 0 00113567899999999999999999999999999
Q ss_pred ccc
Q 023270 273 IKN 275 (284)
Q Consensus 273 ~~~ 275 (284)
++.
T Consensus 442 ~~~ 444 (467)
T PTZ00284 442 LKY 444 (467)
T ss_pred ccc
Confidence 984
No 114
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-47 Score=307.52 Aligned_cols=252 Identities=34% Similarity=0.536 Sum_probs=215.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-----e
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE-----R 93 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~-----~ 93 (284)
-.|...+.+|+|+||.||++...++++.||||++....-.. -+|+++|+.++||||+++..+|.... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 45889999999999999999999999999999985543222 26889999999999999998885321 4
Q ss_pred EEEEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEeecccccc
Q 023270 94 IFLILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGDFGWSVQ 168 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d~~~~~~ 168 (284)
..+|+||++. +|...++. +..++...++-+..||+.||.|||..||+|+||||.|+|++.+ |.+||+|||.+..
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 6789999985 99888874 5678999999999999999999999999999999999999987 9999999999854
Q ss_pred c--CCCCccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC--------
Q 023270 169 S--RSKRHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-------- 237 (284)
Q Consensus 169 ~--~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 237 (284)
. +++...+.++-.|+|||.+.+.. |+.+.||||.||++.||+-|.+.|.+.+..+++..+.+-...+..
T Consensus 176 L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 176 LVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred eccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 3 34445667888999999988765 899999999999999999999999999888887777664211111
Q ss_pred -------------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 238 -------------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 238 -------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
....++++.+|++++|..+|.+|.++.+++.||||...-+|
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 23578999999999999999999999999999999988776
No 115
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.1e-45 Score=303.10 Aligned_cols=248 Identities=40% Similarity=0.672 Sum_probs=219.3
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|++|.||++.+..+++.|++|++...........+.+.+|+.+++.++|+|++++++.+.+++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999989999999999766555445567889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--CccccCCCcccC
Q 023270 107 YRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RHTMCGTLDYLA 184 (284)
Q Consensus 107 ~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~y~a 184 (284)
.+++.+...++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++...... .....+++.|+|
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 160 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA 160 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccC
Confidence 999988888999999999999999999999999999999999999999999999999998554332 233457888999
Q ss_pred ccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC
Q 023270 185 PEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES--QKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLS 262 (284)
Q Consensus 185 PE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 262 (284)
||.+.+..++.++|+||+|++++++++|..||.... ......+...+......+...++++.+++.+||..+|.+||+
T Consensus 161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLG 240 (262)
T ss_pred hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcC
Confidence 999988889999999999999999999999998776 666666666444444455566899999999999999999999
Q ss_pred -----HHhhhcCccccc
Q 023270 263 -----LQKIMEHPWIIK 274 (284)
Q Consensus 263 -----~~~il~~~~~~~ 274 (284)
++++++||||.+
T Consensus 241 ~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 241 NLKGGIKDIKKHKWFNG 257 (262)
T ss_pred CcccCHHHHhcChhhhC
Confidence 999999999985
No 116
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.6e-45 Score=304.50 Aligned_cols=256 Identities=29% Similarity=0.432 Sum_probs=217.7
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
.|+..+.||.|+||+||++.+..+++.||+|.+.............+.+|+++++.++|++++++.+.+..++..++++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37888999999999999999999999999999866544443344566789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCcc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~ 175 (284)
|+++++|.+.+... ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 99999999888654 3689999999999999999999999999999999999999999999999998754322 2233
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHhc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD--LSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l 253 (284)
..++..|+|||.+.+..++.++|+||+|++++++++|..||................ ........++.++.+|+..||
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLL 240 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHc
Confidence 467899999999988889999999999999999999999998876654433333211 122334468899999999999
Q ss_pred ccCCCCCCC-----HHhhhcCcccccc
Q 023270 254 VKDSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 254 ~~~p~~Rps-----~~~il~~~~~~~~ 275 (284)
..||++||+ +.++++|+||++-
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 241 TKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred cCCHhHcCCCcccChHHHHcChhhhcC
Confidence 999999999 8899999999875
No 117
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.5e-45 Score=301.93 Aligned_cols=254 Identities=27% Similarity=0.498 Sum_probs=215.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH--HHHHHHHHHHHHHHHHHhCCCCcccceeeEEec--CCeE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI--EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD--DERI 94 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~--~~~~ 94 (284)
.+|++.+.||+|++|.||++.+..++..|++|.+..... ........+.+|+.+++.++|+|++++++++.. +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 579999999999999999999999999999998754322 222345678889999999999999999998865 3678
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
++++||+++++|.+++...+.++....+.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999998743221
Q ss_pred ---CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 172 ---KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 172 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
......++..|+|||.+.+..++.++|+||+|++++++++|..||..........+..........+..+++.++++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDF 241 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHH
Confidence 11223467889999999988899999999999999999999999988776666655544333333344678889999
Q ss_pred HHHhcccCCCCCCCHHhhhcCcccc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
+ +||..+|++||+++++++||||+
T Consensus 242 i-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 242 L-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred H-HHhcCChhhCcCHHHHhcCcccc
Confidence 9 57778999999999999999997
No 118
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.5e-45 Score=306.49 Aligned_cols=255 Identities=30% Similarity=0.479 Sum_probs=214.8
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
.|++.+.||.|+||.||++.+..+++.|++|.+.............+..|+.+++.++|++++++++.+..++..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47888999999999999999999999999999866544433334566789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCcc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~ 175 (284)
|+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 99999999888654 3589999999999999999999999999999999999999999999999998754322 2223
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK---DTFRRIMKVDLSFPSAPSISAEAKHLISRL 252 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 252 (284)
..++..|+|||.+.+..++.++|+||+|+++++|++|..||...... .......... .......+++++.+|+++|
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-QEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-hhhcCccCCHHHHHHHHHH
Confidence 46789999999999888999999999999999999999999865432 2222222211 1223346889999999999
Q ss_pred cccCCCCCCC-----HHhhhcCcccccc
Q 023270 253 LVKDSSKRLS-----LQKIMEHPWIIKN 275 (284)
Q Consensus 253 l~~~p~~Rps-----~~~il~~~~~~~~ 275 (284)
|+.||++||| ++++++||||.+.
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 9999999999 8999999999864
No 119
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.1e-44 Score=300.26 Aligned_cols=252 Identities=27% Similarity=0.445 Sum_probs=214.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH---HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI---EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
+|++.+.||.|+||+||++.. .++..+++|.+..... ........+.+|+..++.++|+|++++++++.+++..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999976 4788899998754321 222334678899999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC------
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR------ 170 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~------ 170 (284)
++||+++++|.+++.+..+++...+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 99999999999999888889999999999999999999999999999999999999999999999999874321
Q ss_pred ---CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-CCCCCCCCCCCHHHH
Q 023270 171 ---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV-DLSFPSAPSISAEAK 246 (284)
Q Consensus 171 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 246 (284)
.......++..|+|||.+.+..++.++|+||||++++++++|..||...+........... ......+..++.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (265)
T cd06631 160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAI 239 (265)
T ss_pred cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHH
Confidence 1112345778899999999888999999999999999999999999876655544433332 222334456899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+++.+||..+|.+||++.+++.||||
T Consensus 240 ~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 240 DFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999999999997
No 120
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.8e-45 Score=315.40 Aligned_cols=255 Identities=23% Similarity=0.393 Sum_probs=210.8
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD----- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~----- 91 (284)
..++|++.+.||+|+||.||++.+..+++.|+||++....... .....+.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-hhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 4689999999999999999999999999999999986543222 2235667899999999999999999987543
Q ss_pred -CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 92 -ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
...|+||||+++ +|...+.. .++...+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 357999999975 77776654 47889999999999999999999999999999999999999999999999986543
Q ss_pred CC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------------
Q 023270 171 SK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP------------ 236 (284)
Q Consensus 171 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------------ 236 (284)
.. .....+++.|+|||++.+..++.++||||||+++++|++|..||...+..+.+..+........
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 32 2334678999999999999999999999999999999999999988777665555443211000
Q ss_pred ----------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 237 ----------------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 237 ----------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
.....+.++++||.+||..||.+|||++++|+||||...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 001235678999999999999999999999999999864
No 121
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-44 Score=297.32 Aligned_cols=251 Identities=29% Similarity=0.546 Sum_probs=215.9
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec-CCeEEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD-DERIFLIL 98 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~-~~~~~~v~ 98 (284)
+|++.+.||.|++|.||++.+..+++.|++|.+....... ...+.+.+|+.+++.++|+|++++++.+.. +..+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 5899999999999999999999999999999986544332 234567889999999999999999988764 44689999
Q ss_pred eecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CC
Q 023270 99 EYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KR 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~ 173 (284)
||+++++|.+++... ..+++.+++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++..... ..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 999999999998764 4589999999999999999999999999999999999999999999999998754322 22
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
....+++.|+|||.+.+..++.++|+||+|++++++++|..||...+..........+... ..+..+++++.+++.+|+
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l 238 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP-PMPKDYSPELGELIATML 238 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC-CCccccCHHHHHHHHHHh
Confidence 3345788999999999999999999999999999999999999888777766666555432 234468899999999999
Q ss_pred ccCCCCCCCHHhhhcCccc
Q 023270 254 VKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~ 272 (284)
+.+|.+||++.+++.||||
T Consensus 239 ~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 239 SKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ccCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
No 122
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.4e-45 Score=315.12 Aligned_cols=257 Identities=22% Similarity=0.380 Sum_probs=209.5
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC----
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD---- 91 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~---- 91 (284)
....+|++.+.||.|+||.||++.+..+++.|++|++....... .....+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-HHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence 35689999999999999999999999999999999986543222 2345667899999999999999999988543
Q ss_pred --CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 92 --ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 92 --~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
...++||||+++ ++...+.. .++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 357999999975 67666644 4788999999999999999999999999999999999999999999999998654
Q ss_pred CCC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--------------
Q 023270 170 RSK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-------------- 233 (284)
Q Consensus 170 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------- 233 (284)
... .....+++.|+|||++.+..++.++||||||+++++|++|..||.+.+..+..........
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 332 2334678999999999998999999999999999999999999987765444333222100
Q ss_pred --------CC------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 234 --------SF------------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 234 --------~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.. ......+.++++||.+||..||++|||++++|+||||+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 00 00112356789999999999999999999999999998543
No 123
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.3e-45 Score=313.22 Aligned_cols=253 Identities=23% Similarity=0.406 Sum_probs=206.7
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeE
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGW 87 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~ 87 (284)
+++...+|++.+.||.|+||.||+|.+. .++..||+|++..... ....+.+.+|+.++..+ +|+||++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT--ASEHKALMSELKILIHIGNHLNVVNLLGA 79 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc--hHHHHHHHHHHHHHHHhccCcceeeEEeE
Confidence 4566679999999999999999999753 3456799999864322 12345688899999999 89999999998
Q ss_pred EecC-CeEEEEEeecCCCchHHHHHhc-----------------------------------------------------
Q 023270 88 FHDD-ERIFLILEYAHRGELYRELRKH----------------------------------------------------- 113 (284)
Q Consensus 88 ~~~~-~~~~~v~e~~~~~~L~~~l~~~----------------------------------------------------- 113 (284)
+... +.++++|||+++|+|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8654 4689999999999999998653
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----CccccCC
Q 023270 114 ---------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGT 179 (284)
Q Consensus 114 ---------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~ 179 (284)
..++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++...... .....++
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 23778888999999999999999999999999999999999999999999988543211 1122345
Q ss_pred CcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 180 LDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
+.|+|||++.+..++.++||||||+++|+|++ |..||......+..............+...++++.+++.+||..||.
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 78999999998889999999999999999997 99999876654444444443333444557889999999999999999
Q ss_pred CCCCHHhhhc
Q 023270 259 KRLSLQKIME 268 (284)
Q Consensus 259 ~Rps~~~il~ 268 (284)
+|||+.++++
T Consensus 320 ~RPs~~el~~ 329 (338)
T cd05102 320 ERPTFSALVE 329 (338)
T ss_pred hCcCHHHHHH
Confidence 9999999986
No 124
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.8e-45 Score=302.93 Aligned_cols=253 Identities=28% Similarity=0.475 Sum_probs=211.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|.||++.+..++..|++|.+..... ....+.+.+|+.++.+++|+|++++++++..++..++|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT--VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 478999999999999999999999999999999854322 223457888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-CCcccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KRHTMC 177 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~~~~~ 177 (284)
||+++++|..+ ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++..... ......
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 99999888654 3468889999999999999999999999999999999999999999999998854332 233456
Q ss_pred CCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-------HHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 178 GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-------DTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 178 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
++..|+|||.+.+..++.++|+||||++++++++|..||...... ...................++++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 788999999999888999999999999999999999999653221 2222222222222223357889999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccccCC
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+||..+|.+||+++++++||||++...
T Consensus 235 ~~l~~~P~~Rp~~~eil~~~~~~~~~~ 261 (279)
T cd06619 235 QCMRKQPKERPAPENLMDHPFIVQYND 261 (279)
T ss_pred HHhhCChhhCCCHHHHhcCcccccccC
Confidence 999999999999999999999988743
No 125
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-44 Score=304.56 Aligned_cols=254 Identities=29% Similarity=0.494 Sum_probs=219.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|+||++.+..+++.|++|.+...... ..+.+.+|+..++.++|+|++++++++..++..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 5699999999999999999999999999999998543322 2356778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~ 175 (284)
||+++++|..++.. ..+++..+..++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 96 EYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred EecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 99999999998865 46899999999999999999999999999999999999999999999999987543221 223
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD-LSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~ 254 (284)
..++..|+|||.+.+..++.++|+||||++++++++|..||...+............ .....+..+++.+.+++.+||.
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 254 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLE 254 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhh
Confidence 457788999999988889999999999999999999999998887766555444322 2223344688999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.+|.+||++.+++.||||+.+.
T Consensus 255 ~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 255 MDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred cChhhCCCHHHHhhChHhhhcc
Confidence 9999999999999999998764
No 126
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.1e-45 Score=306.45 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=202.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHH---hCCCCcccceeeEEec-----C
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQS---SLRHPNILRLYGWFHD-----D 91 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~---~l~h~~i~~~~~~~~~-----~ 91 (284)
+|++.+.||.|+||+||+|.+..+++.|++|.+....... .....+.+|+..++ .++|+||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 6999999999999999999999999999999886432211 11122334444444 4579999999998754 3
Q ss_pred CeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 92 ERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
...++++|++++ +|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 468999999974 888888764 35899999999999999999999999999999999999999999999999987543
Q ss_pred CCC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-----C-------
Q 023270 170 RSK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS-----F------- 235 (284)
Q Consensus 170 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-----~------- 235 (284)
... .....++..|+|||.+.+..++.++||||+|+++++|++|.+||..........++...... +
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 322 22345788899999999888999999999999999999999999887776655554431100 0
Q ss_pred -------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 -------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 -------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+.++.++.+++.+||..||++|||+.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0113567889999999999999999999999999998
No 127
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-44 Score=305.05 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=218.2
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
..+|++.+.||.|++|.||++.+..++..|++|.+....... ...+.+|+.+++.+.|+|++++++.+..+...++|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 358999999999999999999999999999999986543332 35677899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
+||+++++|.+++.+ ..++..++..++.|++.||.|||..|++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 999999999998865 45799999999999999999999999999999999999999999999999987543221 22
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV-DLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l 253 (284)
...+++.|+|||.+.+...+.++|+||||++++++++|..||...+........... ......+..+++.+.+++.+||
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 254 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHC
Confidence 345788999999998888999999999999999999999999877765444433322 2222334468899999999999
Q ss_pred ccCCCCCCCHHhhhcCccccccC
Q 023270 254 VKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
..+|.+||+++++++||||..+.
T Consensus 255 ~~~p~~Rpt~~eil~~~~~~~~~ 277 (296)
T cd06654 255 DMDVEKRGSAKELLQHQFLKIAK 277 (296)
T ss_pred cCCcccCcCHHHHhhChhhhccC
Confidence 99999999999999999998863
No 128
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.8e-45 Score=306.24 Aligned_cols=261 Identities=30% Similarity=0.502 Sum_probs=218.2
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH--HHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE--KYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+|++.+.||.|++|.||++.+..+++.|++|.+...... .......+..|+..++.++|+|++++++++..++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 589999999999999999999999999999998654432 122345667899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---
Q 023270 98 LEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--- 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--- 173 (284)
+||+ +++|.+++.... .++...++.++.|+++||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM 159 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence 9999 789999998776 79999999999999999999999999999999999999999999999999985543321
Q ss_pred ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC----------------
Q 023270 174 HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP---------------- 236 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~---------------- 236 (284)
....+++.|.|||.+.+ ..++.++|+||||++++++++|.++|...+..+.+.+.........
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T cd07841 160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF 239 (298)
T ss_pred cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence 22345678999998855 4578999999999999999999888887776655555433210000
Q ss_pred ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCCCC
Q 023270 237 ----------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPRGT 281 (284)
Q Consensus 237 ----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~ 281 (284)
.....+.++.+++.+||.++|++|||+.+++.||||++.+.|.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~~ 294 (298)
T cd07841 240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTPP 294 (298)
T ss_pred cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCCC
Confidence 012357889999999999999999999999999999999988764
No 129
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.6e-44 Score=296.51 Aligned_cols=251 Identities=31% Similarity=0.533 Sum_probs=221.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||.+++..++..+++|.+....... ...+.+.+|++++++++|+|++++++++.+++..++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 6999999999999999999999999999999986544333 234567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---c
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---H 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~ 174 (284)
|+++++|.+++... ..++...+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||++....... .
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 99999999999875 468999999999999999999999999999999999999999999999999875443222 3
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...+++.|.|||.+.+...+.++|+||||++++++++|..||...+..+....+..+..... .+.++.++.+++.+||.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~ 238 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV-VSVYSSELISLVHSLLQ 238 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-ccccCHHHHHHHHHHcc
Confidence 34578899999999888889999999999999999999999998888888877776554432 35689999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|.+|||++++++|||+
T Consensus 239 ~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 239 QDPEKRPTADEVLDQPLL 256 (256)
T ss_pred cCcccCCCHHHHhhCcCC
Confidence 999999999999999996
No 130
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-44 Score=300.06 Aligned_cols=252 Identities=29% Similarity=0.478 Sum_probs=216.2
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|++|+||++....++..+++|++....... ..+.+.+|+..++.++|+|++++++.+..++..++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999986443322 4567889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 99 EYAHRGELYRELRKH---RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
|++++++|.+++... ..+++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999874332211
Q ss_pred -----ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC----CCCCH
Q 023270 174 -----HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA----PSISA 243 (284)
Q Consensus 174 -----~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 243 (284)
....++..|+|||.+... ..+.++|+||||+++++|++|..||...+......+........... ..+++
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK 238 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccH
Confidence 223477889999998776 68899999999999999999999998877766666655543221111 25788
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
++.+++.+||..||.+|||+++++.||||
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 239 SFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999999999999999999998
No 131
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.9e-45 Score=306.49 Aligned_cols=257 Identities=28% Similarity=0.472 Sum_probs=218.1
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
..+|++++.||.|++|.||++.+..++..|++|.+....... .+.+.+|+.+++.++|+|++++++++..++..++|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 378999999999999999999999999999999986533222 35677889999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
+||+++++|.+++.. ..++...+..++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 173 (297)
T cd06656 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (297)
T ss_pred ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcC
Confidence 999999999998865 45789999999999999999999999999999999999999999999999987543222 12
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK-VDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l 253 (284)
...+++.|+|||.+.+..++.++|+||||++++++++|..||...+.......... +......+..+++.+.+++.+||
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 253 (297)
T cd06656 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCL 253 (297)
T ss_pred cccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHc
Confidence 34577889999999988899999999999999999999999987665443332222 22222234467889999999999
Q ss_pred ccCCCCCCCHHhhhcCccccccCCC
Q 023270 254 VKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
..+|.+||+++++++||||+.....
T Consensus 254 ~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 254 EMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred cCChhhCcCHHHHhcCchhcccccc
Confidence 9999999999999999999976543
No 132
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.7e-44 Score=301.95 Aligned_cols=254 Identities=30% Similarity=0.520 Sum_probs=216.3
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++.+.||.|++|.||++.+..++..+++|.+..... ...+.+.+|+.+++.++|+|++++++++..++..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH---HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 6889999999999999999999999999999854332 2345677899999999999999999999999999999999
Q ss_pred cCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCccc
Q 023270 101 AHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRHTM 176 (284)
Q Consensus 101 ~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~~~ 176 (284)
+++++|...+.+ ..++++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 163 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 163 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccc
Confidence 999999888765 45789999999999999999999999999999999999999999999999998743322 12334
Q ss_pred cCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHH
Q 023270 177 CGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHLIS 250 (284)
Q Consensus 177 ~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~ 250 (284)
.+++.|+|||.+. +..++.++|+||+|+++++|++|..||...+............. ....+..++.++.+++.
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 243 (282)
T cd06643 164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLK 243 (282)
T ss_pred cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHH
Confidence 5788999999873 34577899999999999999999999988877766666655432 22233467899999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccccCC
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+||..+|.+||+++++++||||+....
T Consensus 244 ~~l~~~p~~Rp~~~~il~~~~~~~~~~ 270 (282)
T cd06643 244 KCLEKNVDARWTTTQLLQHPFVTVNSN 270 (282)
T ss_pred HHccCChhhCcCHHHHhcCCCEeccCC
Confidence 999999999999999999999997643
No 133
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.4e-45 Score=304.13 Aligned_cols=255 Identities=31% Similarity=0.527 Sum_probs=218.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|.||++.+..++..+++|.+.... ....+.+..|+.+++.++|+|++++++++..++..++||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 46999999999999999999998899999999985432 223456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCc
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~ 174 (284)
||+++++|.+++... ..+++..+..++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||.+..... ...
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999999998764 5789999999999999999999999999999999999999999999999998743322 222
Q ss_pred cccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Q 023270 175 TMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHL 248 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 248 (284)
...+++.|+|||.+. ...++.++|+||||+++|++++|..||...+............. ....+..++.++.++
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDF 241 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHH
Confidence 345788899999874 34467899999999999999999999998877766666655432 222334678999999
Q ss_pred HHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+.+||..+|.+|||++++++||||.+.-
T Consensus 242 i~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 242 LKSCLVKDPDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred HHHHhccChhhCcCHHHHhcChhhcccc
Confidence 9999999999999999999999999863
No 134
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.2e-44 Score=298.51 Aligned_cols=254 Identities=26% Similarity=0.492 Sum_probs=215.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhh--HHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQ--IEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERI 94 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~ 94 (284)
.+|++.+.||+|+||.||++.+..++..|++|.+.... .......+.+.+|+..++.++|+|++++++++.++ ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 68999999999999999999999999999999875322 12223456788899999999999999999988764 468
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
++++||+++++|.+++.+.+.++...++.++.|++.+|.+||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 89999999999999998888889999999999999999999999999999999999999999999999998753321
Q ss_pred ---CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 172 ---KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 172 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
......++..|+|||.+.+...+.++|+||||+++++|++|..||...+......+..........+..++..+.++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDF 241 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHH
Confidence 12223477889999999888899999999999999999999999987766666655554433333444678889999
Q ss_pred HHHhcccCCCCCCCHHhhhcCcccc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
+++|+. +|++||+++++++|||+.
T Consensus 242 i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 242 LKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHhc-ChhhCCCHHHHhcCcccC
Confidence 999995 999999999999999984
No 135
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2e-44 Score=298.22 Aligned_cols=255 Identities=34% Similarity=0.519 Sum_probs=222.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|++|.||+|.+..+++.|++|.+...... .....+.+|+..+..++|+|++++++++..++..++++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4799999999999999999999999999999998665432 34567889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccCCCCc---
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH--- 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--- 174 (284)
||+++++|.+++.....++...++.++.|++.++.+||+ .|++|+||+|+||+++.++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 999999999999988889999999999999999999999 9999999999999999999999999998754432221
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhcCCCCCCCCC-CCHHHHHHHH
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE---SQKDTFRRIMKVDLSFPSAPS-ISAEAKHLIS 250 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 250 (284)
...++..|.|||.+.+..++.++|+||||++++++++|..||... ...+....+..... ...... ++..+.+++.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~ 237 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP-PSLPAEEFSPEFRDFIS 237 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC-CCCCcccCCHHHHHHHH
Confidence 345678899999999888999999999999999999999999777 44555555554433 233334 8899999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccccC
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+||.++|.+||+++++++||||++..
T Consensus 238 ~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 238 ACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred HHccCChhhCCCHHHHHhCHHHHhcc
Confidence 99999999999999999999998753
No 136
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.4e-44 Score=302.50 Aligned_cols=257 Identities=29% Similarity=0.485 Sum_probs=217.3
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|++++.||.|++|.||++.+..++..+++|.+.... ....+.+.+|+..++.++|+|++++++.+..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 55999999999999999999999999999999986543 223466788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
||+++++|...+.+ ...+++..++.++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 168 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence 99999999887755 457899999999999999999999999999999999999999999999999987443221 22
Q ss_pred cccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Q 023270 175 TMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHL 248 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 248 (284)
...+++.|+|||.+. ...++.++|+||||+++|+|++|..||...+......+...... .......++.++.++
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 248 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDF 248 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHH
Confidence 345678899999885 34467899999999999999999999988776666655554322 222334678899999
Q ss_pred HHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
+.+||..+|++||+++++++||||......
T Consensus 249 i~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 249 LKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred HHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 999999999999999999999999875543
No 137
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-44 Score=303.18 Aligned_cols=253 Identities=29% Similarity=0.513 Sum_probs=211.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|++|.||++.+..+++.|++|++....... ...+.+.+|+.+++.++|+|++++++++..++..++|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 47999999999999999999999999999999985432111 22345678999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---cc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~ 175 (284)
||+++++|..++.....+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD 159 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccC
Confidence 999988888877777789999999999999999999999999999999999999999999999999885443322 23
Q ss_pred ccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-------------------CC
Q 023270 176 MCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-------------------SF 235 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------------~~ 235 (284)
..++..|+|||.+.+ ..++.++|+||||+++++|++|..||...+..+....+..... ..
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07847 160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSI 239 (286)
T ss_pred cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccC
Confidence 446788999999876 4578899999999999999999999987766554443322100 00
Q ss_pred CC----------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 PS----------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+. .+.++..+.+|+.+||.++|.+||++.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 240 PEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00 12467889999999999999999999999999998
No 138
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.2e-44 Score=297.06 Aligned_cols=253 Identities=29% Similarity=0.485 Sum_probs=218.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH--HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI--EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+|+..+.||+|++|.||++.+..++..|++|.+..... ......+.+.+|+..++.++|+|++++++++..++..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 57888999999999999999988999999999854332 1223456788999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--Ccc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RHT 175 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~ 175 (284)
+||+++++|.+++.+.+.++...+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999999988888999999999999999999999999999999999999999999999999987543322 234
Q ss_pred ccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
..++..|+|||.+.... ++.++|+||||++++++++|..||.....................++.+++++.+++++||.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 240 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQ 240 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhh
Confidence 45788899999987776 89999999999999999999999987776555555544333334455788999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|.+||++++++.|||+
T Consensus 241 ~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 241 RDPSLRPTAAELLEHPFV 258 (258)
T ss_pred cCcccCcCHHHHhcCCCC
Confidence 999999999999999996
No 139
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=311.43 Aligned_cols=259 Identities=36% Similarity=0.682 Sum_probs=235.8
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
=|.+.+.||+|-|+.|.+|++.-+|+.||||++.+...+.-. ...+.+|++-|+.++||||++++++......+|+|.|
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 389999999999999999999999999999999988777644 3567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEe-cCCCCEEEeeccccccc--CCCCcc
Q 023270 100 YAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL-DHEGRLKIGDFGWSVQS--RSKRHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~-~~~~~~~l~d~~~~~~~--~~~~~~ 175 (284)
.-++|+|.++|-.+ ..++++.+..++.||+.|+.|+|+.-++|+||||+||.+ ..-|-|||.|||++... +.....
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 99999999999776 579999999999999999999999999999999999877 45699999999998444 334456
Q ss_pred ccCCCcccCccccCCCCCC-chhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
.+|+..|.|||++.+..|+ ++.||||||+|+|-|.+|.+||...++.+.+..++.=.+..+. -++.+.++||.+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs--hvS~eCrdLI~sMLv 255 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS--HVSKECRDLIQSMLV 255 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch--hhhHHHHHHHHHHHh
Confidence 7899999999999999986 6899999999999999999999999999999999987766665 799999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCCCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANPRGT 281 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~~~~ 281 (284)
.||++|.|.++|..++|+|-.+.+.+|
T Consensus 256 RdPkkRAslEeI~s~~Wlq~~D~~~sT 282 (864)
T KOG4717|consen 256 RDPKKRASLEEIVSTSWLQAGDRGLST 282 (864)
T ss_pred cCchhhccHHHHhccccccCCCCCccc
Confidence 999999999999999999999887765
No 140
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.4e-45 Score=301.58 Aligned_cols=254 Identities=31% Similarity=0.490 Sum_probs=216.0
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++.+..++..++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 4788999999999999999999999999999998664332 33467788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccCCC-Ccc
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-RHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-~~~ 175 (284)
|++++++|.+++... ..++...+..++.|++.++.+||+ .|++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 999989999999876 788999999999999999999999 99999999999999999999999999987433211 112
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE-----SQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
..++..|+|||.+.+..++.++|+||||++++++++|..||... ...+.................++.++.++|.
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 238 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN 238 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence 56778899999998889999999999999999999999999654 2333444444332222222237899999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccc
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
+||..+|.+|||+.+++.||||++
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 239 LCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred HHcCCCchhCcCHHHHhhCchhhc
Confidence 999999999999999999999975
No 141
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-44 Score=309.19 Aligned_cols=253 Identities=19% Similarity=0.339 Sum_probs=206.6
Q ss_pred eeeeeccC--CCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 23 IGRPLGKG--KFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 23 ~~~~lg~g--~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
++++||.| ++++||++.+..+++.||+|.+....... ...+.+.+|+.+++.++||||+++++++..++..++|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH-HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 78899999999999999999986544322 3356778899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-------
Q 023270 101 AHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS------- 171 (284)
Q Consensus 101 ~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~------- 171 (284)
+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++++||+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999999763 4589999999999999999999999999999999999999999999999975422111
Q ss_pred ---CCccccCCCcccCccccCC--CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----------
Q 023270 172 ---KRHTMCGTLDYLAPEMVEN--KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF----------- 235 (284)
Q Consensus 172 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 235 (284)
......++..|+|||.+.+ ..++.++||||||+++++|++|..||..............+....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 0112235567999999876 458899999999999999999999998765544333332221110
Q ss_pred ---------------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 236 ---------------------------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 236 ---------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+....+++++.+|+++||..||++|||++++++||||++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 01113567899999999999999999999999999998754
No 142
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.9e-44 Score=296.27 Aligned_cols=251 Identities=29% Similarity=0.567 Sum_probs=219.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|+||.+|++.+..+++.|++|.+....... ...+.+.+|+..++.++|+|++++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 6999999999999999999999999999999986543332 234577889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---c
Q 023270 100 YAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---H 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~ 174 (284)
|+++++|.+.+.... .+++..++.++.|++.++.+||+.|++|+||+|+||+++.++.++++|||++....... .
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 999999999887643 57899999999999999999999999999999999999999999999999875433221 2
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...+++.|+|||.+.+...+.++|+||||++++++++|..||...+..+.......+... ..+..++.++.+++.+||.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~ 238 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP-PVSSHYSYDLRNLVSQLFK 238 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC-CCcccCCHHHHHHHHHHhh
Confidence 234678899999998888999999999999999999999999988887777777665433 2344689999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|.+||++.++++||||
T Consensus 239 ~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 239 RNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CChhhCcCHHHHhhCcCC
Confidence 999999999999999998
No 143
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.5e-44 Score=298.48 Aligned_cols=254 Identities=28% Similarity=0.513 Sum_probs=215.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH---HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI---EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
+|+..+.||+|++|.||++.+..+++.|++|++..... ......+.+..|++.++.++|+|++++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 58889999999999999999999999999999864321 122345788899999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEeecccccccCCC---
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~~~--- 172 (284)
|+||+++++|.+++.+.+++++..++.++.|++.||.+||+.|++|+||+|+||+++.++ .++|+|||.+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 999999999999998888899999999999999999999999999999999999998776 5999999987443221
Q ss_pred ----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcCCCCCCCCCCCHHH
Q 023270 173 ----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK---DTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 173 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
.....++..|+|||.+.+..++.++|+||+|++++++++|..||...... ....+..........++.+++++
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGL 240 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHH
Confidence 12235678899999998888999999999999999999999999754432 23333333333344445688999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
.+++.+||..+|.+||++.++++||||+
T Consensus 241 ~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 241 RDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 9999999999999999999999999996
No 144
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.6e-44 Score=301.32 Aligned_cols=252 Identities=37% Similarity=0.676 Sum_probs=222.0
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v 97 (284)
++|.+.+.||+|++|.||++.+..+++.|++|++...........+.+..|..+++.+. |+||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999997755444444577888999999998 99999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---- 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---- 173 (284)
||++++++|.+++.....++...++.++.|++.+|.+||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 9999999999999998889999999999999999999999999999999999999999999999999874432211
Q ss_pred -------------------ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC
Q 023270 174 -------------------HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS 234 (284)
Q Consensus 174 -------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 234 (284)
....++..|+|||.+.+...+.++|+||||++++++++|..||...+.............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~- 239 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY- 239 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC-
Confidence 122356789999999888899999999999999999999999998887666666654333
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCH----HhhhcCccc
Q 023270 235 FPSAPSISAEAKHLISRLLVKDSSKRLSL----QKIMEHPWI 272 (284)
Q Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~----~~il~~~~~ 272 (284)
..+..+++.+.+++.+||+.+|.+|||+ ++++.||||
T Consensus 240 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 240 -SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred -CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 3344789999999999999999999999 999999998
No 145
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-44 Score=300.54 Aligned_cols=254 Identities=27% Similarity=0.448 Sum_probs=213.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
....++|++.+.||.|++|.||+|.+..+++.|++|.+...... ....+.+|+.+++.++|+|++++++.+..++..
T Consensus 5 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 5 RNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKL 81 (267)
T ss_pred cCcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEE
Confidence 34456899999999999999999999999999999998554322 234567899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
++++||+++++|.+++...+.+++..++.++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred EEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 99999999999999998888999999999999999999999999999999999999999999999999998743322
Q ss_pred CCccccCCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHH
Q 023270 172 KRHTMCGTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEA 245 (284)
Q Consensus 172 ~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l 245 (284)
......+++.|+|||.+. ...++.++|+||||+++++|++|..||...................+. ...++..+
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHH
Confidence 223346788999999874 455788999999999999999999998765554444333333222221 12467889
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCcc
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPW 271 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~ 271 (284)
.+++.+||..+|++|||++++++|||
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99999999999999999999999998
No 146
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.8e-44 Score=296.38 Aligned_cols=250 Identities=31% Similarity=0.507 Sum_probs=215.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|.||++.+..+++.+++|++...... ..+.+.+|+.+++.++|+|++++++++..++.++++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5799999999999999999999989999999998654322 3467889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCc
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~ 174 (284)
||+++++|.+++... ..++...++.++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 999999999998776 7899999999999999999999999999999999999999999999999998754332 122
Q ss_pred cccCCCcccCccccCCC---CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC---CCCCCCHHHHHH
Q 023270 175 TMCGTLDYLAPEMVENK---EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP---SAPSISAEAKHL 248 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l 248 (284)
...++..|+|||.+.+. .++.++|+||||+++++|++|..||...+................ .....+.++.++
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF 239 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence 34567889999998776 788999999999999999999999988776665555444322221 223467889999
Q ss_pred HHHhcccCCCCCCCHHhhhcCcc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPW 271 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~ 271 (284)
+++||..+|.+|||+++++.|+|
T Consensus 240 i~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 240 IKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999999999999998
No 147
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-44 Score=298.45 Aligned_cols=253 Identities=29% Similarity=0.496 Sum_probs=213.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH-------HHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE-------KYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~-------~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
+|.+.+.||.|++|.||++.+..+++.|++|.+...... .....+.+.+|+..++.++|+|++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 688999999999999999999889999999987532221 1123456788999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
..++|+||+++++|.+++...+.++...+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 161 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999987543321
Q ss_pred -----CccccCCCcccCccccCCCC--CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC----CCCCC
Q 023270 173 -----RHTMCGTLDYLAPEMVENKE--HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP----SAPSI 241 (284)
Q Consensus 173 -----~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 241 (284)
.....++..|+|||.+.... ++.++|+||||++++++++|..||..........+......... ....+
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T cd06629 162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL 241 (272)
T ss_pred ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence 12234678899999987654 78899999999999999999999977666554444333222222 22356
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+.++.+++.+||.++|.+|||++++++||||
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 242 SPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 8999999999999999999999999999997
No 148
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.2e-44 Score=301.58 Aligned_cols=251 Identities=28% Similarity=0.513 Sum_probs=207.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..++..|++|++....... .....+.+|+.+++.++|+|++++++++..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 6899999999999999999999999999999986533221 223567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---
Q 023270 100 YAHRGELYRELRKH---RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--- 173 (284)
Q Consensus 100 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--- 173 (284)
|++ ++|..++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 997 5888887653 468999999999999999999999999999999999999999999999999875432221
Q ss_pred ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-------------------
Q 023270 174 HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL------------------- 233 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------------- 233 (284)
....+++.|+|||.+.+. .++.++|+||||+++++|++|..||...+.............
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 223457889999988654 478899999999999999999999987665443333221100
Q ss_pred --C------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 234 --S------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 234 --~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
. ......+++++.++|++||+.||.+|||+.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0 00123478999999999999999999999999999998
No 149
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4e-44 Score=296.14 Aligned_cols=251 Identities=35% Similarity=0.601 Sum_probs=212.4
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHH-HHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEI-QSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~-~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
+.||.|++|.||+|.+..+++.|++|++.............+..+... ....+|+|++++++++..++..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999999999999999999865543332223333444433 4455899999999999999999999999999
Q ss_pred CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCCCccc
Q 023270 104 GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYL 183 (284)
Q Consensus 104 ~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~y~ 183 (284)
++|.+++...+.++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... .....+++.|+
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~ 160 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-NKKFVGTPDYL 160 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-cccCCCCcCcc
Confidence 99999999888899999999999999999999999999999999999999999999999998754332 23345778899
Q ss_pred CccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHhcccCCCCCC
Q 023270 184 APEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP--SAPSISAEAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 184 aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp 261 (284)
|||.+.+..++.++|+||||++++++++|..||...+..............++ ....+++++.+++.+||..+|.+||
T Consensus 161 ~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 240 (260)
T cd05611 161 APETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRL 240 (260)
T ss_pred ChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHcc
Confidence 99999888889999999999999999999999998888877776665543333 2235789999999999999999999
Q ss_pred ---CHHhhhcCccccccC
Q 023270 262 ---SLQKIMEHPWIIKNA 276 (284)
Q Consensus 262 ---s~~~il~~~~~~~~~ 276 (284)
++++++.||||++..
T Consensus 241 ~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 241 GANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCCcHHHHHcChHhhcCC
Confidence 558999999998753
No 150
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.5e-44 Score=299.83 Aligned_cols=252 Identities=26% Similarity=0.427 Sum_probs=211.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|++.+.||.|+||.||++.+..+++.|++|++...... ....+.+|+.+++.++|+|++++++.+..++..++
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD---DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc---hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 345799999999999999999999999999999998643322 23467789999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---C
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---R 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~ 173 (284)
|+||+++++|.+++.....++...+..++.|++.|+.|||+.|++|+|++|+||+++.++.++|+|||++...... .
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 9999999999999988888999999999999999999999999999999999999999999999999988543221 2
Q ss_pred ccccCCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHHHH
Q 023270 174 HTMCGTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEAKH 247 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 247 (284)
....+++.|+|||.+. ...++.++|+||+|+++++|++|..||...........+.......+. ...++..+.+
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHN 243 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHH
Confidence 3345778899999874 344788999999999999999999999765544433332222222221 2356889999
Q ss_pred HHHHhcccCCCCCCCHHhhhcCcc
Q 023270 248 LISRLLVKDSSKRLSLQKIMEHPW 271 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~~~~ 271 (284)
++++||..+|.+|||++++++|+|
T Consensus 244 li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 244 FVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHHhhCChhhCcCHHHHhcCCC
Confidence 999999999999999999999987
No 151
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.8e-44 Score=303.40 Aligned_cols=258 Identities=27% Similarity=0.451 Sum_probs=218.2
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
-..|++.+.||+|++|+||++.+..+++.|++|++...........+.+.+|+.+++.++|+|++++.+++..++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35699999999999999999999999999999998654443444456788999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccc
Q 023270 98 LEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTM 176 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 176 (284)
+||+. +++.+.+.. .+.++...+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-~~~~ 171 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-ANSF 171 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-CCCc
Confidence 99997 577777654 45789999999999999999999999999999999999999999999999998754332 2334
Q ss_pred cCCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 177 CGTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 177 ~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
.+++.|+|||.+. ...++.++||||||++++++++|..||...+.....................+.++.+++.+||
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 251 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCL 251 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHh
Confidence 5778899999874 4558889999999999999999999998877766655554433222223356889999999999
Q ss_pred ccCCCCCCCHHhhhcCccccccCC
Q 023270 254 VKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
..+|.+||++.+++.||||++...
T Consensus 252 ~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 252 QKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred cCChhhCcCHHHHhcChhhcccCC
Confidence 999999999999999999998753
No 152
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.5e-44 Score=299.28 Aligned_cols=256 Identities=28% Similarity=0.518 Sum_probs=219.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|...+.||.|++|.||++.+..++..+++|++..... ...+.+.+|+.+++.++|+|++++++++..++..++++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 56667899999999999999989999999998854322 223567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRHTM 176 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~~~ 176 (284)
|+++++|.+++.. ..++...+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+..... .....
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 175 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL 175 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence 9999999999887 6789999999999999999999999999999999999999999999999997643322 12234
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-APSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~ 255 (284)
.+++.|+|||.+.+..++.++|+||||++++++++|..||...+................. ...++..+.+++.+||..
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (285)
T cd06648 176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVR 255 (285)
T ss_pred cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHccc
Confidence 5788999999998888999999999999999999999999888777776666654322221 224789999999999999
Q ss_pred CCCCCCCHHhhhcCccccccCCCC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
+|++|||++++++||||+++.++.
T Consensus 256 ~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 256 DPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred ChhhCcCHHHHccCcccccCCCcc
Confidence 999999999999999999987643
No 153
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.5e-44 Score=295.57 Aligned_cols=249 Identities=30% Similarity=0.526 Sum_probs=214.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||.|++|.||++....++..|++|.+..... .+.+.+|++.++.++|+|++++++++..++..++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 579999999999999999999988899999999855432 467889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
|++++++|.+++... ..+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN 157 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence 999999999999764 57899999999999999999999999999999999999999999999999987543322 22
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD-LSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l 253 (284)
...++..|+|||.+.+..++.++|+||||+++++|++|..||...+............ .....+..++.++.+++.+||
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 237 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCL 237 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHH
Confidence 3346788999999988889999999999999999999999998766655444333221 122223357789999999999
Q ss_pred ccCCCCCCCHHhhhcCccc
Q 023270 254 VKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~ 272 (284)
..+|.+|||++++|+||||
T Consensus 238 ~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 238 VKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred hcChhhCcCHHHHhcCCCC
Confidence 9999999999999999997
No 154
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.2e-44 Score=296.99 Aligned_cols=248 Identities=37% Similarity=0.667 Sum_probs=219.7
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|++|.||++.+..+++.+++|++.............+.+|++.++.++|+|++++++.+..++..++++|++++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999888999999999766554445567888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----------Ccc
Q 023270 107 YRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-----------RHT 175 (284)
Q Consensus 107 ~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-----------~~~ 175 (284)
.+++.+.+.+++..+..++.|++.+|.+||+.|++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 160 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR 160 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence 999988788999999999999999999999999999999999999999999999999987433222 123
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..++..|+|||...+...+.++|+||||++++++++|..||......+.......+...++....+++++.+++.+||+.
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 240 (265)
T cd05579 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVP 240 (265)
T ss_pred cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcC
Confidence 34677899999998888999999999999999999999999988888887777765555555444599999999999999
Q ss_pred CCCCCCCH---HhhhcCccccc
Q 023270 256 DSSKRLSL---QKIMEHPWIIK 274 (284)
Q Consensus 256 ~p~~Rps~---~~il~~~~~~~ 274 (284)
+|.+|||+ .++|+||||.+
T Consensus 241 ~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 241 DPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred CHhhcCCCccHHHHhcCccccC
Confidence 99999999 99999999975
No 155
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.8e-44 Score=298.95 Aligned_cols=250 Identities=29% Similarity=0.497 Sum_probs=210.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC------
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD------ 91 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~------ 91 (284)
..|++.+.||.|+||.||++.+..+++.|++|.+...... ...+.+|+..+..+ +|+|++++++++...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 4688999999999999999999999999999998654322 24567888888888 699999999998643
Q ss_pred CeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 92 ERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
...++++||+++++|.+++... ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4689999999999999998864 36899999999999999999999999999999999999999999999999997543
Q ss_pred C---CCCccccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q 023270 170 R---SKRHTMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSI 241 (284)
Q Consensus 170 ~---~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
. .......+++.|+|||++. +..++.++|+||+|+++++|++|..||........................+
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW 241 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCc
Confidence 2 2223345788899999986 3357889999999999999999999998776665555544443333344467
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+.++.+|+.+||..+|.+|||+++++.||||
T Consensus 242 ~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 242 SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 8999999999999999999999999999998
No 156
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-44 Score=332.75 Aligned_cols=266 Identities=29% Similarity=0.508 Sum_probs=219.7
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
....++.+.+|.+++.||.|+||+||+|.+..++..+++|++....... .....+..|+.++..++|+||+++++++..
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d 83 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-REKSQLVIEVNVMRELKHKNIVRYIDRFLN 83 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence 3567788899999999999999999999999999999999986544333 234677889999999999999999998854
Q ss_pred --CCeEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-------CccccCCCCCCeEecCC--
Q 023270 91 --DERIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHEN-------HVIHRDIKPENLLLDHE-- 155 (284)
Q Consensus 91 --~~~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~-------gi~H~dl~p~nil~~~~-- 155 (284)
...+|+||||+++++|..+|... ..+++..++.++.||+.||.|||.. +|+|+||+|+|||++.+
T Consensus 84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 84 KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 35789999999999999998753 5799999999999999999999985 49999999999999642
Q ss_pred ---------------CCEEEeecccccccCC--CCccccCCCcccCccccCC--CCCCchhhHhhHHHHHHHHHhCCCCC
Q 023270 156 ---------------GRLKIGDFGWSVQSRS--KRHTMCGTLDYLAPEMVEN--KEHDYAVDNWTLGILCYEFLYGAPPF 216 (284)
Q Consensus 156 ---------------~~~~l~d~~~~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~tg~~p~ 216 (284)
+.++|+|||++..... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 3599999999854432 2233468999999999864 44789999999999999999999999
Q ss_pred CCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 217 EAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
...+....+..........+ ....+.++.+||..||..+|.+||++.++|.||||+....|
T Consensus 244 ~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 244 HKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred CcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence 76655544444444332222 23578999999999999999999999999999999877554
No 157
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.4e-44 Score=301.40 Aligned_cols=253 Identities=27% Similarity=0.482 Sum_probs=211.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|.||++.+..+++.|++|.+....... ...+.+.+|+++++.++|+|++++++++..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 47999999999999999999998899999999986543322 33456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~ 175 (284)
||+++++|..+......++...++.++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD 159 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence 99999888887777667999999999999999999999999999999999999999999999999987543221 122
Q ss_pred ccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-------------------C
Q 023270 176 MCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS-------------------F 235 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-------------------~ 235 (284)
..++..|+|||.+.+ ..++.++||||||+++++|++|.+||...+..+....+...... .
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence 346788999998865 34778999999999999999999999876655444333321000 0
Q ss_pred ----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 ----------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+.++..+.+++.+||..+|.+||++.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0123568889999999999999999999999999998
No 158
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-44 Score=301.33 Aligned_cols=260 Identities=26% Similarity=0.445 Sum_probs=219.9
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
++.++|++.+.||+|++|+||++.+..+++.|++|++.... .......+.+|+++++.++|+|++++++++...+.++
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 35678999999999999999999999899999999875432 1233567889999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccC-CCC
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR-SKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~-~~~ 173 (284)
+|+||+++++|.+++...+.++...+..++.+++.++.|||+ .|++|+||+|+||+++.++.++|+|||++.... ...
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 999999999999999888889999999999999999999997 699999999999999999999999999874332 222
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHhcCCCCCCCCCCC
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-----------DTFRRIMKVDLSFPSAPSIS 242 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 242 (284)
....++..|+|||.+.+..++.++|+||||++++++++|..||...... +.................++
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFP 239 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcC
Confidence 3446788999999998888999999999999999999999999865542 23333333322222223478
Q ss_pred HHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 243 AEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
.++.+|+.+||..||.+|||++++++|+||.+...
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 89999999999999999999999999999987643
No 159
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1e-43 Score=294.11 Aligned_cols=252 Identities=30% Similarity=0.590 Sum_probs=214.1
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..++..|++|.+...... ....+.+.+|+.+++.++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 699999999999999999999889999999998665433 3456788999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC------
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR------ 173 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~------ 173 (284)
|+++++|.+++.....++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 99999999999887778999999999999999999999999999999999999999999999999875432221
Q ss_pred -ccccCCCcccCccccCCCC---CCchhhHhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHhc-CCCCCCCCCCCHHHHH
Q 023270 174 -HTMCGTLDYLAPEMVENKE---HDYAVDNWTLGILCYEFLYGAPPFEAESQKD-TFRRIMKV-DLSFPSAPSISAEAKH 247 (284)
Q Consensus 174 -~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~~ 247 (284)
....+++.|+|||.+.+.. .+.++|+||||++++++++|..||....... ........ ....+....+++.+.+
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKD 239 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHH
Confidence 1234678899999988766 8899999999999999999999997653332 22222221 2222233345899999
Q ss_pred HHHHhcccCCCCCCCHHhhhcCccc
Q 023270 248 LISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
++.+||..+|.+|||+++++.|||+
T Consensus 240 li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 240 FLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999999996
No 160
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1e-43 Score=292.80 Aligned_cols=252 Identities=31% Similarity=0.538 Sum_probs=219.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~~~v 97 (284)
+|++.+.||+|++|.||++.+..+++.|++|++...... ....+.+.+|+..+++++|+|++++++.+... +..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 588999999999999999999989999999998665433 23457888999999999999999999999988 899999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----- 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----- 172 (284)
+|++++++|.+++.+...++...++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 999999999999998888999999999999999999999999999999999999999999999999987554433
Q ss_pred CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 173 RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES-QKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.....++..|.|||.+.+...+.++|+||||++++++++|..||.... .................+..++.++.+++.+
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 239 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK 239 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHH
Confidence 234457888999999988889999999999999999999999998766 3333333333233344455779999999999
Q ss_pred hcccCCCCCCCHHhhhcCccc
Q 023270 252 LLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~~~~ 272 (284)
|+..+|.+||++.+++.||||
T Consensus 240 ~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 240 CLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred hCcCChhhCCCHHHHhhCCCC
Confidence 999999999999999999997
No 161
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-44 Score=302.82 Aligned_cols=251 Identities=26% Similarity=0.541 Sum_probs=205.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||+|.+..+|+.|++|.+....... .....+.+|+.+++.++|+|++++++++.+.+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc-cCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 5899999999999999999999999999999986533221 223456789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccc
Q 023270 100 YAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~ 175 (284)
|+++ +|.+++.+ ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 9974 78777765 467899999999999999999999999999999999999999999999999987543322 123
Q ss_pred ccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCC-CCCChHHHHHHHHhcCC--------------C---C-
Q 023270 176 MCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPF-EAESQKDTFRRIMKVDL--------------S---F- 235 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~-~~~~~~~~~~~~~~~~~--------------~---~- 235 (284)
..+++.|+|||.+.+.. ++.++||||||+++++|++|..|+ ...+..+.+..+.+... . .
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 34678899999987654 689999999999999999988875 44444444333322100 0 0
Q ss_pred ---------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 ---------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+.++++++++|.+||..||.+|||+++++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0113468899999999999999999999999999998
No 162
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.3e-44 Score=298.84 Aligned_cols=252 Identities=33% Similarity=0.533 Sum_probs=212.8
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||+|.+..++..|++|++....... .....+.+|+.+++.++|+|++++++++..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 6899999999999999999999999999999986544322 234577889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC----Cc
Q 023270 100 YAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----RH 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----~~ 174 (284)
|+ +++|.+++... ..+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99 88999988654 57899999999999999999999999999999999999999999999999987544332 22
Q ss_pred cccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------------------
Q 023270 175 TMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF------------------ 235 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------------ 235 (284)
...++..|+|||.+.+.. ++.++||||+|++++++++|.++|...+..+............
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 345788899999986544 6899999999999999999999898777666555544321110
Q ss_pred -C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 236 -P---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 236 -~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
. ..+..+.++.+++.+||..+|.+|||+++++.||||.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0 0124578999999999999999999999999999984
No 163
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.4e-44 Score=293.05 Aligned_cols=251 Identities=33% Similarity=0.505 Sum_probs=218.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||+|++|.||++.+..+++.+++|.+....... .....+.+|+++++.++|+|++++++.+..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 6899999999999999999999999999999987654333 235678899999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEeecccccccCCC--Cc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSRSK--RH 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~~~--~~ 174 (284)
|+++++|.+++... ..+++..+..++.+++.++.+||++|++|+||+|+||+++.++ .++|+|||.+...... ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 99999999999764 3589999999999999999999999999999999999998654 6899999988544322 23
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...++..|+|||.+.+...+.++|+||||++++++++|..||...+.............. .....++.++.+++.+||.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~ 238 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-PISDRYSPDLRQLILSMLN 238 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC-CCCCCcCHHHHHHHHHHcc
Confidence 345788999999998888899999999999999999999999988877777666654332 3344689999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|.+|||++++++||||
T Consensus 239 ~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 239 LDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CChhhCCCHHHHhhCCCC
Confidence 999999999999999997
No 164
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5e-44 Score=299.60 Aligned_cols=258 Identities=27% Similarity=0.462 Sum_probs=215.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++++.||.|++|.||++.+..++..|++|.+...... .....+.+|+.+++.++|+|++++++.+..++..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDE--SKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 3789999999999999999999999999999988543211 22356778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccccC-CCC
Q 023270 99 EYAHRGELYRELRKH---RRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR-SKR 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~-~~~ 173 (284)
||+++++|..++... ..+++..+..++.+++.|+.|||. .|++|+||+|+||+++.++.++|+|||.+.... ...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 999999999888764 378999999999999999999997 599999999999999999999999999875432 222
Q ss_pred ccccCCCcccCccccCCCC------CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cCCCCCCCCCCCHHH
Q 023270 174 HTMCGTLDYLAPEMVENKE------HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK--VDLSFPSAPSISAEA 245 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~------~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 245 (284)
....+++.|+|||.+.+.. ++.++|+||||++++++++|..||.............. .......++.+++++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd06622 159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDA 238 (286)
T ss_pred ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHH
Confidence 3345778899999985443 47899999999999999999999977655544333222 112233344689999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.+++.+||..+|.+||+++++++||||.+...+
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 999999999999999999999999999887544
No 165
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.8e-44 Score=301.23 Aligned_cols=258 Identities=28% Similarity=0.506 Sum_probs=218.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|.....||+|+||.||++.+..++..|+||.+.... ....+.+.+|+..++.++|+|++++++.+..++..++|+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 44666788999999999999998899999999985432 223456788999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~~ 175 (284)
||+++++|.+++.. +.++...+..++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 177 (292)
T cd06658 99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS 177 (292)
T ss_pred eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCce
Confidence 99999999988754 4689999999999999999999999999999999999999999999999998743321 1223
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~ 254 (284)
..++..|+|||.+.+..++.++|+||||++++++++|..||...+............. .......++..+.+++..||.
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 257 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLV 257 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHcc
Confidence 4578889999999888899999999999999999999999988777665555443321 222233578899999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANPRG 280 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (284)
.+|.+|||++++++||||.....|.+
T Consensus 258 ~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 258 REPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred CChhHCcCHHHHhhChhhhccCCccc
Confidence 99999999999999999998877654
No 166
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.1e-44 Score=302.87 Aligned_cols=264 Identities=31% Similarity=0.467 Sum_probs=217.2
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERI 94 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~ 94 (284)
.+.+|++.+.||.|++|.||++.+..+++.|++|.+....... .......+|+.++++++|+|++++++++.+. +..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 5688999999999999999999999999999999985433221 1122445789999999999999999998755 568
Q ss_pred EEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 95 FLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
++|+||+++ +|.+++... ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999999974 888888764 57899999999999999999999999999999999999999999999999988554322
Q ss_pred --CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC---------------
Q 023270 173 --RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS--------------- 234 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 234 (284)
.....+++.|+|||.+.+ ..++.++|+||+|+++++|++|..||...+..+....+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 122234677999999865 45789999999999999999999999988887776655442110
Q ss_pred ----CCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCCCCC
Q 023270 235 ----FPS---------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPRGTC 282 (284)
Q Consensus 235 ----~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~ 282 (284)
... ....++++.++|.+||.+||++|||++++++||||++.+.|.-+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~ 303 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPE 303 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCC
Confidence 000 012578899999999999999999999999999999998886555
No 167
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-44 Score=309.00 Aligned_cols=248 Identities=24% Similarity=0.407 Sum_probs=200.2
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|.+++.||.|+||.||+|.+..++..|++|+.... ....|+.+++.++|+||+++++++..++..++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999985332 22357889999999999999999999999999
Q ss_pred EEeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC--CCC
Q 023270 97 ILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKR 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~--~~~ 173 (284)
|+|++. ++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||.+.... ...
T Consensus 135 v~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 135 VLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred EEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence 999996 578777765 4678999999999999999999999999999999999999999999999999985432 222
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCC-CCCCCCCh---------HHHHHHHHhcC----CCCC---
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGA-PPFEAESQ---------KDTFRRIMKVD----LSFP--- 236 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~-~p~~~~~~---------~~~~~~~~~~~----~~~~--- 236 (284)
....|++.|+|||++.+..++.++||||||+++|+|+++. .+|..... ...+..+.... ..++
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 3456889999999999989999999999999999999844 44443211 11111111100 0000
Q ss_pred -------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 237 -------------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 237 -------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
....++.++.+||.+||+.||++|||++++|+||||++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 01135667888999999999999999999999999986
No 168
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-43 Score=297.91 Aligned_cols=253 Identities=30% Similarity=0.505 Sum_probs=212.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++|++.+.||+|++|.||++.+..+++.|++|++...... ....+.+.+|+++++.++|+|++++++++..++..++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 4799999999999999999999999999999998654322 233467889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC----Cc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----RH 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----~~ 174 (284)
||++++.+..+..+...++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 99998777666666677999999999999999999999999999999999999999999999999987544332 22
Q ss_pred cccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-------------------C
Q 023270 175 TMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-------------------S 234 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-------------------~ 234 (284)
...++..|+|||.+.+. .++.++|+||||++++++++|..||...+..+.......... .
T Consensus 160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07833 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239 (288)
T ss_pred CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence 34567889999999887 789999999999999999999999987665544433222100 0
Q ss_pred C-----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 235 F-----------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 235 ~-----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
. .....++.++.+|+.+||..+|++|||+++++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0 0011348889999999999999999999999999998
No 169
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.8e-44 Score=297.54 Aligned_cols=254 Identities=29% Similarity=0.461 Sum_probs=212.1
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEe----
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFH---- 89 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~---- 89 (284)
.-....|++.+.||.|+||.||++.+..+++.+++|++..... ....+..++.+++.+ +|+|++++++++.
T Consensus 12 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 87 (282)
T cd06636 12 RDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED----EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP 87 (282)
T ss_pred cChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH----HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence 3345789999999999999999999999999999999854321 224567788888888 6999999999884
Q ss_pred --cCCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 90 --DDERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 90 --~~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
.++..+++|||+++++|.+++... ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||+
T Consensus 88 ~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~ 167 (282)
T cd06636 88 PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGV 167 (282)
T ss_pred cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcc
Confidence 346789999999999999998764 3578888999999999999999999999999999999999999999999998
Q ss_pred ccccC---CCCccccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Q 023270 166 SVQSR---SKRHTMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS 237 (284)
Q Consensus 166 ~~~~~---~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
+.... .......+++.|+|||.+. +..++.++|+||||+++++|++|..||.....................
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 247 (282)
T cd06636 168 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLK 247 (282)
T ss_pred hhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCc
Confidence 75432 2223345788999999875 345778999999999999999999999877666555554444333334
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...++.++.++|++||..||.+||++.++++||||
T Consensus 248 ~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 248 SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 44688999999999999999999999999999997
No 170
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.5e-43 Score=293.71 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=213.0
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
+...+|++.+.||.|+||.||++.+. ..+..|++|.+...... .....+.+|+..+..++|+|++++++++..++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD--KQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 45678999999999999999999765 34568999998654322 23457888999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 93 RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
..++||||+++++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++++|||.+.....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999999999775 5789999999999999999999999999999999999999999999999998644322
Q ss_pred CC----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 172 KR----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 172 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
.. ....++..|+|||.+.+..++.++||||||++++++++ |..||...+..+....+..+. ..+.+..++..+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-RLPAPRNCPNLLH 238 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCCCCCCCCHHHH
Confidence 11 11223567999999999999999999999999999775 999999888887777665543 3445567899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhc
Q 023270 247 HLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (284)
+++.+||..+|.+||++++|++
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHH
Confidence 9999999999999999999976
No 171
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.1e-43 Score=292.10 Aligned_cols=251 Identities=32% Similarity=0.530 Sum_probs=216.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec--CCeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD--DERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~--~~~~~~v 97 (284)
+|++.+.||.|++|.||++.+..++..+++|++....... ...+.+..|++.++.++|+|++++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE-KEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 6899999999999999999999999999999986543332 234567889999999999999999997753 4578999
Q ss_pred EeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----hCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 98 LEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCH-----ENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh-----~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+||+++++|.+++.. ..+++...++.++.+++.||.+|| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999876 357899999999999999999999 89999999999999999999999999998855
Q ss_pred cCCCC---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 169 SRSKR---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 169 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
..... ....+++.|+|||.+.+...+.++|+||||++++++++|..||...+..........+.. ...+...+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 238 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF-RRIPYRYSSEL 238 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC-CCCccccCHHH
Confidence 43322 234578899999999988899999999999999999999999998887666666555433 33445788999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
.+++.+||..+|.+||+++++++|||+
T Consensus 239 ~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 239 NEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 999999999999999999999999996
No 172
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.8e-44 Score=297.36 Aligned_cols=251 Identities=23% Similarity=0.392 Sum_probs=215.2
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCC-----ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESK-----HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+.+++|++.+.||.|++|.||++.+...+ ..|++|.+..... ......+.+|+..+..++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 45779999999999999999999876655 6799999864332 2334678899999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC
Q 023270 91 DERIFLILEYAHRGELYRELRKH----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH 154 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~ 154 (284)
.+..++++||+++++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 99999999999999999999764 35788999999999999999999999999999999999999
Q ss_pred CCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 023270 155 EGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRI 228 (284)
Q Consensus 155 ~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~ 228 (284)
++.++|+|||++...... .....+++.|+|||.+.+..++.++|+||||+++++|++ |..||.+.+..+....+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999987543221 123345678999999988889999999999999999998 99999988888777766
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 229 MKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.... ....+..+|+++.+|+.+||+.||.+||++.+++++
T Consensus 240 ~~~~-~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 240 RSRQ-LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HcCC-cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6543 334456789999999999999999999999999875
No 173
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-43 Score=296.50 Aligned_cols=255 Identities=31% Similarity=0.484 Sum_probs=218.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|+..+.||.|++|.||++.+..++..|++|.+...... .....+.+|+..++.+.|+|++++++.+.++...++|+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 4688999999999999999999999999999998654322 23467888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~ 175 (284)
||+++++|.+++.. ++++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++++|||.+...... ...
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 99999999998875 56899999999999999999999999999999999999999999999999987443221 122
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
..++..|+|||.+.+...+.++|+||||++++++++|..||...+........... ........++.++.+++.+||..
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~ 239 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN-NPPTLTGEFSKPFKEFIDACLNK 239 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC-CCCCCchhhhHHHHHHHHHHccc
Confidence 34677899999998888999999999999999999999999887766555544332 22333346788999999999999
Q ss_pred CCCCCCCHHhhhcCccccccCC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+|.+||++++++.||||.+...
T Consensus 240 ~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 240 DPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred CcccCcCHHHHHhChHhhhcch
Confidence 9999999999999999988743
No 174
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.1e-43 Score=297.00 Aligned_cols=257 Identities=25% Similarity=0.421 Sum_probs=208.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHH-HHHhCCCCcccceeeEEecCCeEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREME-IQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~-~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
++|++.+.||+|+||.||++.+..+++.||+|.+........ ...+..++. .++..+|+|++++++++..++..+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999865432221 123334444 46677899999999999999999999
Q ss_pred EeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 98 LEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
+||++ ++|.+++.. ...+++..++.++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99997 588777754 24689999999999999999999997 9999999999999999999999999987543322
Q ss_pred C--ccccCCCcccCccccCC----CCCCchhhHhhHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 173 R--HTMCGTLDYLAPEMVEN----KEHDYAVDNWTLGILCYEFLYGAPPFEAE-SQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 173 ~--~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
. ....++..|+|||.+.+ ..++.++|+||||++++++++|..||... ...+.+...............+|.++
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (283)
T cd06617 158 VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEF 237 (283)
T ss_pred cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHH
Confidence 1 22457788999998865 34688999999999999999999999753 33344444444332222334688999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.+++.+||..+|.+||+++++++||||++...+
T Consensus 238 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 270 (283)
T cd06617 238 QDFVNKCLKKNYKERPNYPELLQHPFFELHLSK 270 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence 999999999999999999999999999998654
No 175
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.5e-43 Score=296.10 Aligned_cols=253 Identities=31% Similarity=0.505 Sum_probs=210.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD---- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~---- 91 (284)
...+|.+.+.||+|++|.||++.+..+++.+++|++...... ...+.+++.++..+ +|+|++++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV----DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH----HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence 467899999999999999999999999999999998543222 24566788888888 799999999998643
Q ss_pred -CeEEEEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 92 -ERIFLILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
+..++|+||+++++|.+++.. ...+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 368999999999999998753 357899999999999999999999999999999999999999999999999987
Q ss_pred cccCC---CCccccCCCcccCccccCCCC-----CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCC
Q 023270 167 VQSRS---KRHTMCGTLDYLAPEMVENKE-----HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPS 237 (284)
Q Consensus 167 ~~~~~---~~~~~~~~~~y~aPE~~~~~~-----~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~ 237 (284)
..... ......++..|+|||.+.... ++.++|+||||+++++|++|..||..........++..... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 255 (291)
T cd06639 176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH 255 (291)
T ss_pred hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCc
Confidence 54322 122345678899999875432 67899999999999999999999988777666655544322 2223
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
.+..+..+.+++.+||..+|.+||++.++++||||+
T Consensus 256 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 256 PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 345778899999999999999999999999999995
No 176
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1e-43 Score=295.62 Aligned_cols=251 Identities=31% Similarity=0.517 Sum_probs=210.1
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC-----
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD----- 91 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~----- 91 (284)
-++|++.+.||.|++|.||+|.+..++..+++|++..... ..+.+.+|+.+++.+ .|+|++++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 3789999999999999999999988999999999865432 235678899999998 699999999998654
Q ss_pred -CeEEEEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 92 -ERIFLILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
..+++|+||+++++|.+++.. ...++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 458999999999999998865 347899999999999999999999999999999999999999999999999987
Q ss_pred cccCC---CCccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-CC
Q 023270 167 VQSRS---KRHTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF-PS 237 (284)
Q Consensus 167 ~~~~~---~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-~~ 237 (284)
..... ......++..|+|||.+.. ..++.++||||||++++++++|..||..........++....... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 240 (275)
T cd06608 161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS 240 (275)
T ss_pred eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc
Confidence 44322 2233457888999998753 346788999999999999999999998776666666555543222 22
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
....+.++++++++||..||.+|||++++++|||+
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 22377899999999999999999999999999996
No 177
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-44 Score=312.55 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=206.6
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEe--cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREV--ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
+...+|.+++.||.|+||.||++... ..+..|++|.+... ....+|+++++.++|+||+++++++...+.
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKST 160 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCE
Confidence 34457999999999999999999754 35677999988543 234578999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
.+++||++. ++|..++.....+++..++.++.||+.||.|||+.|++|+||+|+|||++.++.++|+|||++......
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999999996 588888877788999999999999999999999999999999999999999999999999987543321
Q ss_pred ----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcC-------------
Q 023270 173 ----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ---KDTFRRIMKVD------------- 232 (284)
Q Consensus 173 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~~------------- 232 (284)
.....|++.|+|||++.+..++.++||||||+++|+|++|..||.+... ...+..+.+..
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 1234689999999999998999999999999999999999999965432 11222111100
Q ss_pred ------------CC--CCC-----CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 233 ------------LS--FPS-----APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 233 ------------~~--~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.. ... ...++.++.++|++||..||++|||+.++|.||||++.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence 00 000 113567899999999999999999999999999999864
No 178
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8e-44 Score=299.98 Aligned_cols=258 Identities=29% Similarity=0.543 Sum_probs=219.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.-|.....||.|+||.||++.+..++..|++|.+...... ..+.+.+|+..+..++|+|++++++++..++..++++
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 3466677899999999999999989999999998543322 2356778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~~~ 175 (284)
||+++++|..++.. ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++..... ....
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 99999999887755 5689999999999999999999999999999999999999999999999998743222 1223
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~ 254 (284)
..++..|+|||.+.+..++.++|+||||+++++|++|..||...+..+....+..... .......++.++.+++++||.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 256 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLT 256 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhc
Confidence 4578899999999888899999999999999999999999988777666665544322 122234678899999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANPRG 280 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (284)
.+|.+||+++++++||||.++..|.|
T Consensus 257 ~~P~~Rps~~~ll~~~~~~~~~~~~~ 282 (297)
T cd06659 257 REPQERATAQELLDHPFLLQTGLPEC 282 (297)
T ss_pred CCcccCcCHHHHhhChhhccCCCccc
Confidence 99999999999999999999977654
No 179
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.9e-43 Score=291.55 Aligned_cols=251 Identities=21% Similarity=0.361 Sum_probs=216.7
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
+++...+|.+.+.||+|++|.||++.+..+++.|++|.+..... ....+.+|++.++.++|+|++++++++..++.
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (263)
T cd05052 1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 76 (263)
T ss_pred CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch----HHHHHHHHHHHHHhCCCCChhheEEEEcCCCC
Confidence 35677889999999999999999999999999999999864332 23567789999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 94 IFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
.++++||+++++|.+++... ..++...++.++.|++.+|.+||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 77 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999999999998764 3589999999999999999999999999999999999999999999999998754433
Q ss_pred CCc----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 172 KRH----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 172 ~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
... ....+..|+|||.+.+..++.++||||||+++++|++ |..||.+.+..+....+... .....+..++.++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 235 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRMERPEGCPPKVY 235 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCHHHH
Confidence 221 1223567999999988889999999999999999998 99999988877776666543 34455567899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcC
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+||..+|.+|||+.++++.
T Consensus 236 ~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 236 ELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHccCCcccCCCHHHHHHH
Confidence 99999999999999999999763
No 180
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-43 Score=293.00 Aligned_cols=252 Identities=27% Similarity=0.498 Sum_probs=211.7
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+.+|++.+.||.|+||.||++.+..+++.|++|.+.............+.+|+.+++.++|+|++++++++..++..+++
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 46899999999999999999999999999999987553333334456778899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC
Q 023270 98 LEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 173 (284)
+||+++++|.+++.. ...++...++.++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999988853 3457899999999999999999999999999999999999999999999999875433221
Q ss_pred ---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 174 ---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES--QKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 174 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
....+++.|+|||.+.+...+.++|+||+|++++++++|..||.... .......+.............+..+.++
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLREL 240 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence 23457788999999988889999999999999999999999986543 2344444443333333334678899999
Q ss_pred HHHhcccCCCCCCCHHhhhcC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~ 269 (284)
+.+||..+|.+||+++++++.
T Consensus 241 i~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 241 VSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HHHHCCCCcccCcCHHHHHHH
Confidence 999999999999999999864
No 181
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.7e-44 Score=299.57 Aligned_cols=258 Identities=29% Similarity=0.466 Sum_probs=218.1
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
.....+|.+.+.||+|+||.||++.+..+++.|++|.+..... ...+.+.+|+..++.++|+|++++++++..++..
T Consensus 15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGDEL 91 (293)
T ss_pred cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc---hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcE
Confidence 3345789999999999999999999988999999999854322 2235678899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
++|+||+++++|.+++.+. .++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999999999988764 5789999999999999999999999999999999999999999999999986433221
Q ss_pred -CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHH
Q 023270 173 -RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK-VDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~ 250 (284)
.....+++.|+|||.+.+..++.++|+||||++++++++|..||...+.......... .......+..++..+.++++
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence 2233577889999999888899999999999999999999999987766544433322 22223334467889999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccccC
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+||..+|.+||++.+++.||||++..
T Consensus 251 ~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHccCChhhCcCHHHHhcCHHHhcCc
Confidence 99999999999999999999999774
No 182
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-43 Score=296.85 Aligned_cols=251 Identities=30% Similarity=0.535 Sum_probs=208.2
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++++.||.|++|.||+|.+..+++.|++|.+....... .....+.+|++++++++|+|++++++++.+++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 5899999999999999999999999999999886433221 223567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
|++ ++|.+++... ..++...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 996 5888888653 46899999999999999999999999999999999999999999999999987543221 12
Q ss_pred cccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC------------------
Q 023270 175 TMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF------------------ 235 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------------ 235 (284)
...+++.|+|||.+.+.. ++.++|+||||+++++++||..||...+..+...+........
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 234577899999887654 6889999999999999999999998776655444433211100
Q ss_pred C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 P---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+ ..+.++++++++|.+||..||.+|||++++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0 012468889999999999999999999999999998
No 183
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.7e-44 Score=309.12 Aligned_cols=255 Identities=25% Similarity=0.423 Sum_probs=209.7
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEE-----ecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceee
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVRE-----VESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYG 86 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~-----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~ 86 (284)
.+++..++|++.+.||.|+||.||+|.. ..++..||+|++...... ...+.+.+|++++..+ +||||+++++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~ 106 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLG 106 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeee
Confidence 3445566899999999999999999974 345668999998643322 2245678899999999 8999999999
Q ss_pred EEecCCeEEEEEeecCCCchHHHHHhcC----------------------------------------------------
Q 023270 87 WFHDDERIFLILEYAHRGELYRELRKHR---------------------------------------------------- 114 (284)
Q Consensus 87 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~---------------------------------------------------- 114 (284)
++..++..++||||+++|+|.+++....
T Consensus 107 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 186 (375)
T cd05104 107 ACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKR 186 (375)
T ss_pred eeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccc
Confidence 9999999999999999999999886421
Q ss_pred -----------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 115 -----------------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 115 -----------------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 187 RSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred cccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 367888999999999999999999999999999999999999999999999854332
Q ss_pred CC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 172 KR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 172 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
.. ....++..|+|||.+.+..++.++||||||++++++++ |..||..........+..........+...+.++
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 346 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEM 346 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHH
Confidence 21 11234567999999999999999999999999999997 8999987665544444444433444445678999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.+|+.+||+.||++|||+.++++.
T Consensus 347 ~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 347 YDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHccCChhHCcCHHHHHHH
Confidence 999999999999999999999874
No 184
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.6e-43 Score=298.15 Aligned_cols=255 Identities=25% Similarity=0.447 Sum_probs=217.4
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|...+.||+|++|+||++++..++..|++|.+.............+.+|+..++.++|+|++++++++.++...++|+||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999999999999999999998654443334445778899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCC
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGT 179 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 179 (284)
+. +++.+.+... .+++...++.++.|++.++.|||+.|++|+||+|+||+++.++.++|+|||++.... ......++
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-~~~~~~~~ 180 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-PANSFVGT 180 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-CCCCcccc
Confidence 96 5777777653 578999999999999999999999999999999999999999999999999875432 22345678
Q ss_pred CcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccC
Q 023270 180 LDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKD 256 (284)
Q Consensus 180 ~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 256 (284)
..|+|||.+. +..++.++|+||||+++++|++|..||...+..................+.++..+.+++.+||+.+
T Consensus 181 ~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 260 (313)
T cd06633 181 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKI 260 (313)
T ss_pred ccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCC
Confidence 8899999974 4568889999999999999999999998887766666665544444444567889999999999999
Q ss_pred CCCCCCHHhhhcCccccccCC
Q 023270 257 SSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 257 p~~Rps~~~il~~~~~~~~~~ 277 (284)
|.+||++++++.||||+..+-
T Consensus 261 P~~Rp~~~~~l~~~~~~~~~~ 281 (313)
T cd06633 261 PQERPASAELLRHDFVRRDRP 281 (313)
T ss_pred hhhCcCHHHHhcCcccCCCch
Confidence 999999999999999998653
No 185
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5e-43 Score=288.17 Aligned_cols=251 Identities=33% Similarity=0.593 Sum_probs=220.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..+++.|++|.+....... ...+.+.+|++++++++|+|++++++++..++..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH-HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 6899999999999999999999899999999997655432 345678899999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---ccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HTM 176 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~~ 176 (284)
++++++|.+++.....+++..++.++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999885544322 234
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccC
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKD 256 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 256 (284)
.++..|+|||...+...+.++|+|++|++++++++|..||...+........... .....++.++.++.+++.+||..+
T Consensus 160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~ 238 (254)
T cd06627 160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-DHPPLPEGISPELKDFLMQCFQKD 238 (254)
T ss_pred ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHHhCC
Confidence 5678899999998888899999999999999999999999877766555554433 233344578899999999999999
Q ss_pred CCCCCCHHhhhcCccc
Q 023270 257 SSKRLSLQKIMEHPWI 272 (284)
Q Consensus 257 p~~Rps~~~il~~~~~ 272 (284)
|++|||+++++.||||
T Consensus 239 p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 239 PNLRPTAKQLLKHPWI 254 (254)
T ss_pred hhhCcCHHHHhcCCCC
Confidence 9999999999999998
No 186
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-43 Score=295.04 Aligned_cols=251 Identities=30% Similarity=0.458 Sum_probs=210.1
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|+||+||+|.+..+++.|++|.+.............+..|+.+++.++|+|++++++++...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999999999999998765443333445667899999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCccccCCCcc
Q 023270 107 YRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHTMCGTLDY 182 (284)
Q Consensus 107 ~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~y 182 (284)
.+++.+.+ .+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+..... ......++..|
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGY 160 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCc
Confidence 99998765 789999999999999999999999999999999999999999999999998754322 22234567889
Q ss_pred cCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 183 LAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV--DLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 183 ~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
+|||.+.+..++.++|+||+|+++++|++|..||...........+... ......++.+++++.+++++||..+|.+|
T Consensus 161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 240 (277)
T cd05577 161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240 (277)
T ss_pred CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHc
Confidence 9999998888999999999999999999999999776542222222211 11223344689999999999999999999
Q ss_pred C-----CHHhhhcCccccccCC
Q 023270 261 L-----SLQKIMEHPWIIKNAN 277 (284)
Q Consensus 261 p-----s~~~il~~~~~~~~~~ 277 (284)
| ++.++++||||.+-+-
T Consensus 241 ~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 241 LGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred cCCCcccHHHHHhChhhhcCCh
Confidence 9 8888999999976543
No 187
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-43 Score=312.21 Aligned_cols=248 Identities=25% Similarity=0.376 Sum_probs=202.3
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
....|.+.+.||.|+||.||++.+..++..|++|.... ..+.+|+++++.++|+||+++++++..++..++
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35579999999999999999999999999999997422 234579999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--- 172 (284)
|+|++. ++|..++... ..+++..++.++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++......
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 999996 5888887664 46999999999999999999999999999999999999999999999999998543221
Q ss_pred --CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCC-CCC-------ChHHHHHHHHhcCCC---CC---
Q 023270 173 --RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPF-EAE-------SQKDTFRRIMKVDLS---FP--- 236 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~-~~~-------~~~~~~~~~~~~~~~---~~--- 236 (284)
.....|+..|+|||++.+..++.++||||||+++|+|++|..++ ... ....+.+.+...... ++
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 12345899999999999999999999999999999999876543 221 112222222211110 00
Q ss_pred --------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 237 --------------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 237 --------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
....++.++.+||++||..||++|||++|+|+||||+.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00134568999999999999999999999999999975
No 188
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.2e-43 Score=289.06 Aligned_cols=251 Identities=36% Similarity=0.637 Sum_probs=220.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..++..|++|++....... ...+.+.+|++.++.++|+|++++.+.+..++..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh-HHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 6899999999999999999999999999999986644322 334577889999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---
Q 023270 100 YAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 100 ~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--- 172 (284)
++++++|.+.+.+. ..++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999999999774 67899999999999999999999999999999999999999999999999987544332
Q ss_pred CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 023270 173 RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRL 252 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 252 (284)
.....+++.|+|||.+.+..++.++|+||+|++++++++|..||...+............. ...+..++.++.+++.+|
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~ 238 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY-PPIPSQYSSELRNLVSSL 238 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHH
Confidence 2234577889999999888899999999999999999999999988887777777665542 333447889999999999
Q ss_pred cccCCCCCCCHHhhhcCccc
Q 023270 253 LVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 253 l~~~p~~Rps~~~il~~~~~ 272 (284)
|..+|.+|||++++|+||||
T Consensus 239 l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 239 LQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cCCChhhCcCHHHHhcCCCC
Confidence 99999999999999999997
No 189
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.1e-43 Score=295.92 Aligned_cols=255 Identities=29% Similarity=0.536 Sum_probs=219.8
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
.-..|++...||+|++|.||++.+..++..|++|++..... ....+.+|++.++.++|+|++++++.+..++..++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 34559999999999999999999998999999999865432 34567789999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---
Q 023270 97 ILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--- 172 (284)
++||+++++|.+++...+ .++...+..++.+++.+|.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 172 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK 172 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence 999999999999998876 8999999999999999999999999999999999999999999999999987433221
Q ss_pred CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHH
Q 023270 173 RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS-FPSAPSISAEAKHLISR 251 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~ 251 (284)
.....++..|+|||.+.+..++.++|+||||++++++++|..||...+.............. ......++.++.+++++
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 252 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNK 252 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHH
Confidence 12234678899999998888999999999999999999999999887776655554443222 22223478999999999
Q ss_pred hcccCCCCCCCHHhhhcCcccccc
Q 023270 252 LLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
||+.+|.+|||+.++++|+||++.
T Consensus 253 ~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 253 CLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HhccChhhCcCHHHHhhChHhhcc
Confidence 999999999999999999999983
No 190
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.1e-43 Score=287.45 Aligned_cols=249 Identities=33% Similarity=0.586 Sum_probs=216.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|.+.+.||.|++|.||++.+..+++.+++|++..... .....+.+|+..++.++|++++++++.+..++..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 68999999999999999999988999999999865443 235678899999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--ccc
Q 023270 100 YAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--HTM 176 (284)
Q Consensus 100 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--~~~ 176 (284)
|+++++|.+++... ..++...+..++.+++.++.+||..|++||||+|+||+++.++.++|+|||.+....... ...
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 157 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTM 157 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccce
Confidence 99999999999876 578999999999999999999999999999999999999999999999999875544332 445
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.++..|+|||.+.+...+.++|+||||++++++++|..||...+............. .......++.++.+++.+||..
T Consensus 158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 237 (253)
T cd05122 158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQK 237 (253)
T ss_pred ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccC
Confidence 678889999999888899999999999999999999999988766555554443222 2222223489999999999999
Q ss_pred CCCCCCCHHhhhcCcc
Q 023270 256 DSSKRLSLQKIMEHPW 271 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~ 271 (284)
||.+|||+.++++|||
T Consensus 238 ~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 238 NPEKRPTAEQLLKHPF 253 (253)
T ss_pred ChhhCCCHHHHhcCCC
Confidence 9999999999999998
No 191
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.7e-43 Score=294.96 Aligned_cols=255 Identities=29% Similarity=0.496 Sum_probs=213.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC---CCcccceeeEEecCCeEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR---HPNILRLYGWFHDDERIF 95 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~---h~~i~~~~~~~~~~~~~~ 95 (284)
+.|++.+.||.|++|.||++.+..++..|++|.+...... .....+.+|+.+++.++ |+|++++++++..+...+
T Consensus 1 ~~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 1 SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred ChhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence 3588999999999999999999999999999998543221 22346678888888886 999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--- 172 (284)
+|+||+++++|.+++.. ..++...++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 79 IIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred EEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 99999999999998866 47899999999999999999999999999999999999999999999999987543322
Q ss_pred CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 173 RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.....++..|+|||.+.++ .++.++|+||||+++++|++|..||........................++.++.+++.+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAA 237 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHH
Confidence 2234577889999988654 468899999999999999999999987766555443333222222222378899999999
Q ss_pred hcccCCCCCCCHHhhhcCccccccC
Q 023270 252 LLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
||..||.+||++++++.|+||++..
T Consensus 238 ~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 238 CLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999999999999998875
No 192
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.5e-43 Score=288.66 Aligned_cols=244 Identities=43% Similarity=0.716 Sum_probs=217.4
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|++|.||++.+..+++.+++|.+.............+..|+.+++.++|+|++++++.+..++..+++||++++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999888999999998776555444567888999999999999999999999999999999999988999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---CccccCCCccc
Q 023270 107 YRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHTMCGTLDYL 183 (284)
Q Consensus 107 ~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~~~~~~~y~ 183 (284)
.+++.....+++..+..++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||.+...... .....++..|.
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL 160 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence 999998888999999999999999999999999999999999999999999999999987554332 33455788899
Q ss_pred CccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q 023270 184 APEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSL 263 (284)
Q Consensus 184 aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 263 (284)
|||...+...+.++|+||||++++++++|..||...+............ ...+...++++.+++.+||..||.+||++
T Consensus 161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~p~~R~~~ 238 (250)
T cd05123 161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP--LRFPEFLSPEARDLISGLLQKDPTKRLGS 238 (250)
T ss_pred ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence 9999988889999999999999999999999998888776666666533 44444679999999999999999999999
Q ss_pred ---HhhhcCccc
Q 023270 264 ---QKIMEHPWI 272 (284)
Q Consensus 264 ---~~il~~~~~ 272 (284)
+++++||||
T Consensus 239 ~~~~~l~~~~~f 250 (250)
T cd05123 239 GGAEEIKAHPFF 250 (250)
T ss_pred ccHHHHHhCCCC
Confidence 999999998
No 193
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.2e-43 Score=307.72 Aligned_cols=254 Identities=23% Similarity=0.385 Sum_probs=210.7
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecC-----CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceee
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVES-----KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYG 86 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~ 86 (284)
.+.+...+|++.+.||.|+||.||++.+... +..||+|.+....... ....+.+|+++++.+ +|+||+++++
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~il~~l~~h~nIv~~~~ 109 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD--EREALMSELKILSHLGQHKNIVNLLG 109 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH--HHHHHHHHHHHHHhhccCCceeeEee
Confidence 3445567899999999999999999986543 3579999986543222 245678899999999 8999999999
Q ss_pred EEecCCeEEEEEeecCCCchHHHHHhc-----------------------------------------------------
Q 023270 87 WFHDDERIFLILEYAHRGELYRELRKH----------------------------------------------------- 113 (284)
Q Consensus 87 ~~~~~~~~~~v~e~~~~~~L~~~l~~~----------------------------------------------------- 113 (284)
.+..++..++||||+++++|.+++...
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 999999999999999999999988542
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc--
Q 023270 114 -----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH-- 174 (284)
Q Consensus 114 -----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~-- 174 (284)
..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 1367888999999999999999999999999999999999999999999999754322211
Q ss_pred ---cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 175 ---TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 175 ---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
...++..|+|||++.+..++.++||||||+++++|++ |..||.....................+..+++++.+++.
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 349 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMK 349 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHH
Confidence 1224567999999988889999999999999999997 999998776655555555544444455567899999999
Q ss_pred HhcccCCCCCCCHHhhhc
Q 023270 251 RLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (284)
+||+.||.+|||++++++
T Consensus 350 ~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 350 MCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999999976
No 194
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.8e-43 Score=289.12 Aligned_cols=253 Identities=25% Similarity=0.504 Sum_probs=217.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhh--hHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKE--QIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERI 94 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~ 94 (284)
.+|++.+.||+|++|.||++.+..++..|++|.+... ..........+.+|+..++.++|+|++++++++.+. +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 5799999999999999999999999999999987432 112233456888999999999999999999988654 468
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--- 171 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 171 (284)
++++||+++++|.+++.+.+.++...++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999998754321
Q ss_pred ---CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 172 ---KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 172 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
......++..|+|||.+.+..++.++|+||||++++++++|..||..........+..........++.+++++.++
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 241 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDF 241 (264)
T ss_pred cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHH
Confidence 11233577889999999988899999999999999999999999988777666666555444444566789999999
Q ss_pred HHHhcccCCCCCCCHHhhhcCccc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+.+||. +|..||++.+++.|||+
T Consensus 242 i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 242 LKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHhc-CcccCccHHHHhcCCCC
Confidence 999998 57999999999999985
No 195
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=292.69 Aligned_cols=265 Identities=38% Similarity=0.645 Sum_probs=245.2
Q ss_pred hhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 9 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
+.....++.+++|..++.||.|.||.|.+++.+.+++.||+|++.++-+........-..|-++++..+||.+..+...|
T Consensus 158 ~~~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF 237 (516)
T KOG0690|consen 158 EAKRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF 237 (516)
T ss_pred cccccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh
Confidence 44556678999999999999999999999999999999999999988887777777888899999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
...+.+|+||||..||.|...+.+...++++..+-+...|+.||.|||+++|+++|+|.+|.|++.+|++||.|||+...
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchh
Confidence 99999999999999999999898888999999999999999999999999999999999999999999999999999844
Q ss_pred c---CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 169 S---RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 169 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
. +......+|+|.|+|||++....+..+.|.|.+|++||+|++|++||...+...+..-++.....++. .++++.
T Consensus 318 ~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr--~ls~eA 395 (516)
T KOG0690|consen 318 EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR--TLSPEA 395 (516)
T ss_pred cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc--cCCHHH
Confidence 3 34456678999999999999999999999999999999999999999999999999989988888877 799999
Q ss_pred HHHHHHhcccCCCCCC-----CHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
+.|+..+|..||.+|. .+.+|.+|+||...
T Consensus 396 ktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 396 KTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 9999999999999998 78999999999753
No 196
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.7e-43 Score=294.25 Aligned_cols=249 Identities=30% Similarity=0.493 Sum_probs=201.6
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHH---HHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREM---EIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~---~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
.||+|+||.||++.+..+++.+++|.+...............++. ..+...+|++++.+++.+..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999988654332211112222333 34444579999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-CCccccCCCc
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KRHTMCGTLD 181 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~~ 181 (284)
+++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ......++..
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 160 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 160 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence 999999998888899999999999999999999999999999999999999999999999998754322 2223457899
Q ss_pred ccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 182 YLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQK--DTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 182 y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
|+|||.+.+ ..++.++|+||+|+++++|++|..||...... ....... .......++.+++++.+++++||..||.
T Consensus 161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 239 (279)
T cd05633 161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVS 239 (279)
T ss_pred ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHH
Confidence 999998864 55889999999999999999999999754321 2222221 1223334457899999999999999999
Q ss_pred CCC-----CHHhhhcCcccccc
Q 023270 259 KRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 259 ~Rp-----s~~~il~~~~~~~~ 275 (284)
+|| |+.++++||||+.-
T Consensus 240 ~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 240 KRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred HhcCCCCCCHHHHHhCccccCC
Confidence 999 69999999999873
No 197
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.3e-43 Score=296.00 Aligned_cols=251 Identities=23% Similarity=0.376 Sum_probs=204.6
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEec----------------CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCC
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVE----------------SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHP 79 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~----------------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ 79 (284)
+..++|++.++||+|+||.||+|.+.. ++..||+|.+...... .....+.+|+.++.+++|+
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK--NARNDFLKEVKILSRLKDP 79 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCC
Confidence 445789999999999999999997532 3446999998654322 2346788999999999999
Q ss_pred cccceeeEEecCCeEEEEEeecCCCchHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 023270 80 NILRLYGWFHDDERIFLILEYAHRGELYRELRKHR-------------------RFTEQQAATYIASLTNALAYCHENHV 140 (284)
Q Consensus 80 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-------------------~l~~~~~~~i~~~i~~~l~~lh~~gi 140 (284)
||+++++++.+.+..++||||+++++|.+++.... .++...++.++.|++.||.|||+.|+
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 159 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF 159 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999886532 35778899999999999999999999
Q ss_pred cccCCCCCCeEecCCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh--CC
Q 023270 141 IHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY--GA 213 (284)
Q Consensus 141 ~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t--g~ 213 (284)
+|+||+|+||+++.++.++|+|||++....... ....++..|+|||.+.+..++.++||||||+++++|++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999999999999999999885432211 22334678999999988889999999999999999986 66
Q ss_pred CCCCCCChHHHHHHHHhc------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 214 PPFEAESQKDTFRRIMKV------DLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 214 ~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.||...+..+........ ......++.++..+.+++.+||..+|++|||+++|.+
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 788877666555443221 1112233467899999999999999999999999953
No 198
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.5e-43 Score=288.08 Aligned_cols=247 Identities=29% Similarity=0.520 Sum_probs=214.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..++..|++|.+...... ...+.+.+|+.+++.++|+|++++++.+..++.+++++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 689999999999999999999999999999998543322 234677789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Cc
Q 023270 100 YAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RH 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~ 174 (284)
|+++++|.+++... ..++...++.++.|++.|+.+||+.|++|+||+|+||+++.++.++++|||.+...... ..
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence 99999999988653 45799999999999999999999999999999999999999999999999987543322 22
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...+++.|+|||.+.+..++.++|+||||+++++|++|..||...+..........+... +.+..++..+.+++.+||+
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~ 237 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK-PLPSHYSYELRSLIKQMFK 237 (255)
T ss_pred cccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC-CCCcccCHHHHHHHHHHHh
Confidence 345788899999998888999999999999999999999999988877777776655433 2334688999999999999
Q ss_pred cCCCCCCCHHhhhcC
Q 023270 255 KDSSKRLSLQKIMEH 269 (284)
Q Consensus 255 ~~p~~Rps~~~il~~ 269 (284)
.||.+|||+.+++.-
T Consensus 238 ~~P~~Rp~~~~il~~ 252 (255)
T cd08219 238 RNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCCCHHHHhhc
Confidence 999999999999864
No 199
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.9e-44 Score=294.68 Aligned_cols=244 Identities=32% Similarity=0.580 Sum_probs=204.0
Q ss_pred EeeeeeccCCCeEEEEEEEe----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 22 EIGRPLGKGKFGRVYLVREV----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
.+.+.||.|.||.||+|... ..+..|+||.+.... .....+.+.++++.+++++|+||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--ccccceeeeeccccccccccccccccccccccccccccc
Confidence 46789999999999999988 456679999994432 222357888999999999999999999999988889999
Q ss_pred EeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---
Q 023270 98 LEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--- 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--- 172 (284)
+||+++++|.+++... ..++...++.++.|++.||.|||+.+++|++|+++||+++.++.+||+|||+.......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999887 67999999999999999999999999999999999999999999999999998655221
Q ss_pred --CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 173 --RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
.........|+|||.+.+..++.++||||||++++++++ |..||...+..+....+..+. ..+.+..++..+.+++
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li 238 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ-RLPIPDNCPKDIYSLI 238 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-ETTSBTTSBHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cceeccchhHHHHHHH
Confidence 122335678999999988889999999999999999999 789999998888888875543 3445557899999999
Q ss_pred HHhcccCCCCCCCHHhhhc
Q 023270 250 SRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~ 268 (284)
.+||..+|++|||+.++++
T Consensus 239 ~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 239 QQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHT-SSGGGS--HHHHHH
T ss_pred HHHcCCChhhCcCHHHHHh
Confidence 9999999999999999975
No 200
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.8e-43 Score=290.69 Aligned_cols=251 Identities=29% Similarity=0.521 Sum_probs=211.5
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+.+|++.+.||.|++|.||++.+..++..+++|.+.............+.+|+.+++.++|+|++++++++..++..+++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 36899999999999999999999999999999988654444444456788999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 98 LEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
+|++++++|.+++.. ...+++..++.++.+++.++.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999998864 346899999999999999999999999999999999999999999999999987443222
Q ss_pred --CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 173 --RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ--KDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
.....++..|+|||.+.+...+.++|+||||+++++|++|..||..... ...................++.++.++
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 240 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 240 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHH
Confidence 1234578889999999888899999999999999999999999975443 233333333332323334688899999
Q ss_pred HHHhcccCCCCCCCHHhhhc
Q 023270 249 ISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~ 268 (284)
+.+||..+|.+|||++++++
T Consensus 241 i~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 241 VNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHhcCCCcccCCCHHHHHH
Confidence 99999999999999998765
No 201
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.2e-43 Score=288.45 Aligned_cols=249 Identities=22% Similarity=0.413 Sum_probs=213.3
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
+.+...+|++.++||+|++|.||++.+ .++..|++|.+...... .+.+.+|+.+++.++|+|++++++.+..++.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEP 75 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchh----HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 356788999999999999999999986 45677999987543322 3577889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 94 IFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
.++++||+++++|.+++... ..++...++.++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999999999999764 4678899999999999999999999999999999999999999999999999854432
Q ss_pred CC----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 172 KR----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 172 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
.. ....++..|+|||.+.+..++.++|+||||+++++|++ |..||...+.......+... ...+....++.++.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 234 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMPRMENCPDELY 234 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHH
Confidence 11 12234567999999988889999999999999999998 99999988877777766654 33444457899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhc
Q 023270 247 HLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (284)
+++.+||..+|++||+++++++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 235 DIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHccCCcccCcCHHHHHH
Confidence 9999999999999999999875
No 202
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-43 Score=291.26 Aligned_cols=253 Identities=30% Similarity=0.481 Sum_probs=216.6
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++.+.||.|+||.||++.+..++..|++|.+...... ...+.+.+|+..++.++|+|++++++.+..++..++|+||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 77889999999999999999889999999987543322 2346788899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---Ccccc
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHTMC 177 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~~~ 177 (284)
+++++|.+++.. ..++...+..++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++...... .....
T Consensus 84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 162 (277)
T cd06641 84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 162 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence 999999988865 46899999999999999999999999999999999999999999999999987433221 12235
Q ss_pred CCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCC
Q 023270 178 GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDS 257 (284)
Q Consensus 178 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (284)
++..|+|||.+.+..++.++|+||||++++++++|..||...........+.... .......++.++.+++.+||..+|
T Consensus 163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p 241 (277)
T cd06641 163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEP 241 (277)
T ss_pred CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC-CCCCCcccCHHHHHHHHHHccCCh
Confidence 6788999999988889999999999999999999999998777666555543332 222334678999999999999999
Q ss_pred CCCCCHHhhhcCccccccCC
Q 023270 258 SKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 258 ~~Rps~~~il~~~~~~~~~~ 277 (284)
.+||++.+++.||||.+...
T Consensus 242 ~~Rp~~~~~l~~~~~~~~~~ 261 (277)
T cd06641 242 SFRPTAKELLKHKFIVRFAK 261 (277)
T ss_pred hhCcCHHHHHhCHHHhhhhh
Confidence 99999999999999998644
No 203
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=8.3e-43 Score=287.57 Aligned_cols=251 Identities=29% Similarity=0.589 Sum_probs=217.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|.+.+.||.|++|.||++.+..++..+++|.+....... ...+.+.+|+.+++.++|+|++++++.+..++..++++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 5899999999999999999999999999999986643322 234567789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEeecccccccCCCC---
Q 023270 100 YAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSRSKR--- 173 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~~~~--- 173 (284)
|+++++|.+++.... .+++..+..++.+++.|+.|||+.|++|+||+|+||+++.++ .++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 999999999987653 478999999999999999999999999999999999998886 46999999875443322
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
....+++.|+|||.+.+..++.++|+||||++++++++|..||...+..+........... ...+.++.++.+++.+||
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l 238 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA-PISPNFSRDLRSLISQLF 238 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC-CCCCCCCHHHHHHHHHHh
Confidence 2234778899999998888999999999999999999999999888777777666654432 334468899999999999
Q ss_pred ccCCCCCCCHHhhhcCccc
Q 023270 254 VKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~ 272 (284)
..+|++|||+.+++.||||
T Consensus 239 ~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 239 KVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ccChhhCcCHHHHhhCCCC
Confidence 9999999999999999997
No 204
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-43 Score=295.99 Aligned_cols=254 Identities=30% Similarity=0.465 Sum_probs=216.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
.|++.+.||.|++|.||++.+..++..|++|.+...... ...+.+.+|+..++.++|+|++++++.+..++..++|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 477889999999999999999889999999998643322 234678899999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---ccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HTM 176 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~~ 176 (284)
|+++++|.+++.. ..++...+..++.+++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 9999999988865 568999999999999999999999999999999999999999999999999874433211 223
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccC
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKD 256 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 256 (284)
.++..|+|||.+.+..++.++|+||||++++++++|..|+...........+.... ........+.++.+++.+||..+
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~ 240 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-PPTLEGQYSKPFKEFVEACLNKD 240 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC-CCCCCcccCHHHHHHHHHHccCC
Confidence 46788999999998889999999999999999999999998766655554433332 22233467889999999999999
Q ss_pred CCCCCCHHhhhcCccccccCC
Q 023270 257 SSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 257 p~~Rps~~~il~~~~~~~~~~ 277 (284)
|.+||++.++++||||++...
T Consensus 241 p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06642 241 PRFRPTAKELLKHKFITRYTK 261 (277)
T ss_pred cccCcCHHHHHHhHHHHHHhh
Confidence 999999999999999987643
No 205
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.8e-43 Score=301.70 Aligned_cols=257 Identities=23% Similarity=0.400 Sum_probs=209.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD----- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~----- 91 (284)
..++|++.+.||+|++|.||++.+..+++.|++|.+....... .....+.+|+.+++.++|+|++++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-THAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-hHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 4688999999999999999999999999999999986432222 2234566899999999999999999987543
Q ss_pred -CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 92 -ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
...++|+||++ ++|...+... ++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 35799999997 4888877654 8999999999999999999999999999999999999999999999999986543
Q ss_pred CCC--ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-------------
Q 023270 171 SKR--HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF------------- 235 (284)
Q Consensus 171 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------------- 235 (284)
... ....++..|+|||.+.+..++.++||||||+++++|++|..||...+....+..+.......
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 322 23346788999999999999999999999999999999999998776544443332210000
Q ss_pred -----------------------CC-----CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 236 -----------------------PS-----APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 236 -----------------------~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+. ....+++++++|.+||..||++|||+.++|+||||++--+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 00 1124667899999999999999999999999999975433
No 206
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.1e-42 Score=295.70 Aligned_cols=258 Identities=25% Similarity=0.441 Sum_probs=221.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|...+.||+|+||.||++.+..++..+++|.+.............+.+|++.++.++|+|++++++++..++..++|+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34889999999999999999999999999999986544333344567888999999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcccc
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMC 177 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 177 (284)
||+.+ ++.+.+.. ..+++...+..++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++.... ......
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~-~~~~~~ 182 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS-PANSFV 182 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-Cccccc
Confidence 99975 77777754 4578999999999999999999999999999999999999999999999999874432 223445
Q ss_pred CCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 178 GTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 178 ~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
+++.|+|||.+. .+.++.++|+||||+++++|++|..||...+.....................++.+.+++.+||.
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 262 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQ 262 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHcc
Confidence 788899999873 45688999999999999999999999988877777777766555455555788999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.+|.+||++.++++|+|+......
T Consensus 263 ~~p~~Rpt~~~il~~~~~~~~~~~ 286 (317)
T cd06635 263 KIPQDRPTSEELLKHMFVLRERPE 286 (317)
T ss_pred CCcccCcCHHHHHhChhhhccCcc
Confidence 999999999999999999876543
No 207
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.6e-43 Score=292.41 Aligned_cols=252 Identities=29% Similarity=0.481 Sum_probs=207.4
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEe-----c
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFH-----D 90 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~-----~ 90 (284)
...+|++.+.||+|++|.||++.+..+++.+++|++...... ...+..|+.+++.+ +|+|++++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch----HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 557899999999999999999999999999999987543221 24566788888888 6999999999873 4
Q ss_pred CCeEEEEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 91 DERIFLILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
++..++||||+++++|.+++.. ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 4679999999999999988753 246889999999999999999999999999999999999999999999999987
Q ss_pred cccCC---CCccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CCCCC
Q 023270 167 VQSRS---KRHTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD-LSFPS 237 (284)
Q Consensus 167 ~~~~~---~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~ 237 (284)
..... ......+++.|+|||.+.. ..++.++|+||+|+++++|++|..||................ .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (286)
T cd06638 172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQ 251 (286)
T ss_pred eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccC
Confidence 54322 2223457889999998753 447889999999999999999999998776655444433322 12222
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+...+.++.+++.+||..+|.+|||+.++++|+||
T Consensus 252 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 252 PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 33467899999999999999999999999999997
No 208
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-42 Score=290.87 Aligned_cols=257 Identities=32% Similarity=0.476 Sum_probs=210.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERIFL 96 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~~~ 96 (284)
.+|.+.++||.|++|.||++.+..+++.+++|.+...... .....+.+|++.++.++|+||+++++++... +.+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 4789999999999999999999999999999998654322 2346778899999999999999999988643 47899
Q ss_pred EEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 97 ILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
||||+++++|.+++.. ...++...+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999887653 245889999999999999999999999999999999999999999999999987443222
Q ss_pred -CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhcCCC-CCCC----CCC
Q 023270 173 -RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE-----SQKDTFRRIMKVDLS-FPSA----PSI 241 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~-----~~~~~~~~~~~~~~~-~~~~----~~~ 241 (284)
.....++..|+|||.+.+..++.++|+||||+++++|++|..||... ...+....+...... .... ...
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd06621 159 LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKW 238 (287)
T ss_pred ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCch
Confidence 12344678899999999889999999999999999999999999765 223333333321111 1110 134
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
++++.+++.+||..+|.+|||+.+++.||||++...
T Consensus 239 ~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 239 SEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred HHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 678999999999999999999999999999977644
No 209
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.5e-43 Score=296.92 Aligned_cols=252 Identities=23% Similarity=0.377 Sum_probs=209.9
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCce--EEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHP--VALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD 91 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~--v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~ 91 (284)
.+.+++|++.+.||.|+||.||+|.+..++.. +++|.+.... .......+.+|+.++.++ +|+|++++++++..+
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 46778999999999999999999998877765 4666654321 223346778899999999 899999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC
Q 023270 92 ERIFLILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE 155 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~ 155 (284)
+..++|+||+++++|.+++.... .++...++.++.|++.|+.|||+.|++|+||+|+||+++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 99999999999999999997542 47899999999999999999999999999999999999999
Q ss_pred CCEEEeecccccccCCCC--ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC
Q 023270 156 GRLKIGDFGWSVQSRSKR--HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVD 232 (284)
Q Consensus 156 ~~~~l~d~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~ 232 (284)
+.++|+|||++....... .....+..|+|||.+.+..++.++||||||+++++++| |..||...+..+........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~- 239 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 239 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-
Confidence 999999999874322111 11223567999999988889999999999999999998 99999887777666655443
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 233 LSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.....+..+++++.+++.+||..+|.+||++++++.+
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2333344678999999999999999999999999975
No 210
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.4e-43 Score=301.35 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=218.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-----eE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE-----RI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~-----~~ 94 (284)
+|++.+.||.|++|.||+|.+..+++.|++|.+..... .....+.+.+|+..++.++|+|++++.+++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 69999999999999999999988999999999865432 2233467888999999999999999999987765 78
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
|+++||++ ++|..++.+...+++..++.++.+++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 99999997 589999988778999999999999999999999999999999999999999999999999988544332
Q ss_pred ----CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-----------
Q 023270 173 ----RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP----------- 236 (284)
Q Consensus 173 ----~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 236 (284)
.....++..|+|||.+.+. .++.++|+||||++++++++|..||...+..+....+........
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 238 (330)
T cd07834 159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK 238 (330)
T ss_pred ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence 2234567889999999887 789999999999999999999999988877666555444211111
Q ss_pred ------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 237 ------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 237 ------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
..+.++.++.+++.+||+.+|.+||++++++.||||++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 012468889999999999999999999999999999988766
No 211
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.9e-43 Score=290.38 Aligned_cols=248 Identities=28% Similarity=0.515 Sum_probs=204.2
Q ss_pred ccCcEeeeee--ccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHH-hCCCCcccceeeEEecCCeE
Q 023270 18 LQDFEIGRPL--GKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQS-SLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 18 ~~~y~~~~~l--g~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~-~l~h~~i~~~~~~~~~~~~~ 94 (284)
.++|.+.+.+ |.|+||.||++.+..++..+++|.+........ ++.... ..+|+|++++++.+..++..
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--------e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--------EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--------hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 4577777776 999999999999999999999999865432221 111111 12699999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEeecccccccCCCC
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~~~~ 173 (284)
++||||+++++|.+++.+...+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++ .++|+|||.+......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~- 163 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP- 163 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence 99999999999999998888899999999999999999999999999999999999999998 9999999987544322
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHH-HHHHhc-CCCCCCCCCCCHHHHHHHHH
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTF-RRIMKV-DLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~li~~ 251 (284)
....++..|+|||.+.+..++.++|+||+|+++++|++|..||......... ...... .......+.+++.+.++|.+
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 243 (267)
T PHA03390 164 SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQS 243 (267)
T ss_pred ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHH
Confidence 2345788999999999888999999999999999999999999865443321 111111 12223344689999999999
Q ss_pred hcccCCCCCCC-HHhhhcCccccc
Q 023270 252 LLVKDSSKRLS-LQKIMEHPWIIK 274 (284)
Q Consensus 252 ~l~~~p~~Rps-~~~il~~~~~~~ 274 (284)
||+.+|.+||+ ++++|+||||.+
T Consensus 244 ~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 244 MLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HhccChhhCCchHHHHhcCCcccC
Confidence 99999999996 699999999974
No 212
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.5e-43 Score=295.55 Aligned_cols=253 Identities=29% Similarity=0.476 Sum_probs=209.8
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERIF 95 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~~ 95 (284)
+.+|++.+.||.|++|.||+|.+..+++.+++|.+...... ......+.+|+..++.++|+|++++++++..+ +..+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46899999999999999999999989999999998654332 22234566799999999999999999998877 8999
Q ss_pred EEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 96 LILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
+|+||++ ++|.+++.... .++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 9999997 48988887654 5899999999999999999999999999999999999999999999999987544332
Q ss_pred -CccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC----------------
Q 023270 173 -RHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS---------------- 234 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---------------- 234 (284)
.....+++.|+|||.+.+.. .+.++|+||+|+++++|++|..||...+......++......
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 22344678899999887654 688999999999999999999999887766655544321100
Q ss_pred -------------CCCCCC-CCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 235 -------------FPSAPS-ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 235 -------------~~~~~~-~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...... +++.+.++|.+||..+|++|||+.++++||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 000111 58889999999999999999999999999998
No 213
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.4e-42 Score=288.16 Aligned_cols=255 Identities=30% Similarity=0.493 Sum_probs=208.0
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
+...+.+.....||+|+||.||++.+..++..|++|.+...... ..+.+.+|+.+++.++|+||+++++++..++..
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR---YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH---HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 34455666667899999999999999889999999987554322 235778899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccccccC
Q 023270 95 FLILEYAHRGELYRELRKH-RRF--TEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWSVQSR 170 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~-~~l--~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~~~~ 170 (284)
++++||+++++|.+++... ..+ +...+..++.|++.|+.|||+.|++|+||+|+||+++. ++.++|+|||.+....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 9999999999999999765 445 78889999999999999999999999999999999976 6799999999874432
Q ss_pred C---CCccccCCCcccCccccCCCC--CCchhhHhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCCCCCCCCCHH
Q 023270 171 S---KRHTMCGTLDYLAPEMVENKE--HDYAVDNWTLGILCYEFLYGAPPFEAESQKD-TFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 171 ~---~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 244 (284)
. ......+++.|+|||.+.+.. ++.++|+||+|+++++|++|..||....... ..............+..++++
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAE 240 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHH
Confidence 2 122335788999999986543 7889999999999999999999997644322 222111111222233468899
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+++++.+||..+|.+|||+++++.||||
T Consensus 241 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 241 AKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 9999999999999999999999999997
No 214
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-42 Score=286.49 Aligned_cols=246 Identities=21% Similarity=0.382 Sum_probs=210.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|++.+.||.|+||.||++... ++..+++|.+...... ...+.+|+.+++.++|+|++++++++..++..++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 4578999999999999999999764 5568999987644322 2467789999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
||||+++++|.+++... ..+++..++.++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999999999998754 468999999999999999999999999999999999999999999999999875432211
Q ss_pred --ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 --HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+....+..+.. ...+...+.++.+++.
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~ 235 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR-LYRPKLASMTVYEVMY 235 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCHHHHHHHH
Confidence 12234567999999988889999999999999999999 9999998888888777766542 3334467889999999
Q ss_pred HhcccCCCCCCCHHhhhc
Q 023270 251 RLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (284)
+||..+|.+|||++++++
T Consensus 236 ~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 236 SCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HHccCCcccCcCHHHHHH
Confidence 999999999999999986
No 215
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.7e-43 Score=297.45 Aligned_cols=259 Identities=26% Similarity=0.454 Sum_probs=218.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|+..+.||.|++|.||++++..++..+++|.+...........+.+.+|+++++.++|+|++++++++..+...++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44888999999999999999999999999999986433333333456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcccc
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMC 177 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 177 (284)
||+. +++.+.+.. ...++...+..++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||++..... .....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-~~~~~ 172 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-ANXFV 172 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-ccccc
Confidence 9997 577777654 45689999999999999999999999999999999999999999999999998754432 23345
Q ss_pred CCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 178 GTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 178 ~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
+++.|+|||.+. ....+.++||||||++++++++|..||...+..+.................++..+.++|++||.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 252 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 252 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhh
Confidence 788999999874 34578899999999999999999999988776666666555544444445688999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccCCCC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
.+|.+||++++++.|||+.+...+.
T Consensus 253 ~~P~~Rp~~~~ll~~~~~~~~~~~~ 277 (308)
T cd06634 253 KIPQDRPTSEVLLKHRFVLRERPPT 277 (308)
T ss_pred CCcccCCCHHHHhhCccccccCChh
Confidence 9999999999999999999975543
No 216
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.2e-42 Score=285.04 Aligned_cols=247 Identities=23% Similarity=0.435 Sum_probs=214.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
.+..++|++.+.||.|++|.||++.. .++.|++|.+..... ..+.+.+|+.+++.++|+|++++++++..++..
T Consensus 2 ~~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 75 (256)
T cd05039 2 AINSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL 75 (256)
T ss_pred ccChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCe
Confidence 46788999999999999999999986 478899999865543 346788899999999999999999999989999
Q ss_pred EEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++|+||+++++|.+++.... .+++..+..++.|++.|+.|||..|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999999998765 6899999999999999999999999999999999999999999999999988655433
Q ss_pred CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 173 RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
......+..|.|||.+.+..++.++|+||||++++++++ |..||...+..+........ .....+..+++++.+++.+
T Consensus 156 ~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05039 156 QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-YRMEAPEGCPPEVYKVMKD 234 (256)
T ss_pred cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-CCCCCccCCCHHHHHHHHH
Confidence 333344667999999988889999999999999999997 99999888877766655543 2333445688999999999
Q ss_pred hcccCCCCCCCHHhhhc
Q 023270 252 LLVKDSSKRLSLQKIME 268 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~ 268 (284)
||..+|.+|||++++++
T Consensus 235 ~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 235 CWELDPAKRPTFKQLRE 251 (256)
T ss_pred HhccChhhCcCHHHHHH
Confidence 99999999999999986
No 217
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.3e-43 Score=292.64 Aligned_cols=253 Identities=29% Similarity=0.513 Sum_probs=204.8
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
++.+|++.+.||.|++|.||++.+..+++.|++|.+....... ....+.+|+.+++.++|+||+++++++..++..++
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence 5689999999999999999999998899999999985433211 12345679999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
|+||+++ +|.+++... ..++...++.++.|+++||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 9999985 898888765 468999999999999999999999999999999999999999999999999875432111
Q ss_pred -ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcCC-----------------
Q 023270 174 -HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAES-QKDTFRRIMKVDL----------------- 233 (284)
Q Consensus 174 -~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~----------------- 233 (284)
....++..|+|||.+.+ ..++.++||||+|+++++|++|..||.... ..+....+.....
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 12235778999998865 457899999999999999999999997655 2222222111000
Q ss_pred ----CC-------CCCCCCC--HHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 234 ----SF-------PSAPSIS--AEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 234 ----~~-------~~~~~~~--~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
.. ...+.++ .++.+++.+||.++|++|||+.++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 0001234 788999999999999999999999999998
No 218
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-42 Score=284.97 Aligned_cols=251 Identities=32% Similarity=0.522 Sum_probs=218.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||+|++|.||++.+..+++.+++|.+....... .....+.+|+..++.++|+|++++++++..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 5899999999999999999999999999999986644333 234566789999999999999999999999999999999
Q ss_pred ecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-CCc
Q 023270 100 YAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KRH 174 (284)
Q Consensus 100 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~~ 174 (284)
|+++++|.+++.. ...++...++.++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 9999999998866 34689999999999999999999999999999999999999999999999998744332 222
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
...+++.|+|||.+.+..++.++|+||||++++++++|..||...+..+........... ......+.++.+++.+||.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~ 238 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP-PIPPIYSQDLQNFIRSMLQ 238 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCchhhCHHHHHHHHHHcC
Confidence 345778899999999888999999999999999999999999988887766666554433 2334788999999999999
Q ss_pred cCCCCCCCHHhhhcCccc
Q 023270 255 KDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~ 272 (284)
.+|.+|||++++++||++
T Consensus 239 ~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 239 VKPKLRPNCDKILASPAV 256 (256)
T ss_pred CCcccCCCHHHHhcCCCC
Confidence 999999999999999985
No 219
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1e-42 Score=290.64 Aligned_cols=250 Identities=24% Similarity=0.444 Sum_probs=214.0
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+..++|.+.+.||+|++|.||++.... ++..|++|.+...... ...+.+.+|+++++.++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 79 (280)
T cd05049 2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKDFEREAELLTNFQHENIVKFYGVCTE 79 (280)
T ss_pred CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHHHHHHHHHHHhcCCCCchheeeEEec
Confidence 346789999999999999999998743 3578999998654332 234678899999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC
Q 023270 91 DERIFLILEYAHRGELYRELRKHR--------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG 156 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~--------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~ 156 (284)
++..++||||+++++|.+++...+ .++...+..++.|++.++.+||+.|++|+||+|+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL 159 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence 999999999999999999997642 478889999999999999999999999999999999999999
Q ss_pred CEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 023270 157 RLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMK 230 (284)
Q Consensus 157 ~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~ 230 (284)
.++|+|||++...... .....+++.|+|||.+.+..++.++||||||++++++++ |..||...+..+....+..
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 9999999987543221 122234678999999999999999999999999999998 9999988888887777776
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 231 VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+.... .+..++.++.+++.+||..||.+||+++++++
T Consensus 240 ~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 240 GRLLQ-RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCcCC-CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 54433 33478999999999999999999999999986
No 220
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.9e-43 Score=296.30 Aligned_cols=243 Identities=29% Similarity=0.542 Sum_probs=189.5
Q ss_pred eeeeccCCCeEEEEEEEe--cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec--CCeEEEEEe
Q 023270 24 GRPLGKGKFGRVYLVREV--ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD--DERIFLILE 99 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~--~~~~~~v~e 99 (284)
.++||.|+||+||+|.+. .++..|++|.+...... ..+.+|+++++.++|+||+++++++.. +...++++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc-----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 468999999999999865 46788999998654322 345689999999999999999998854 457899999
Q ss_pred ecCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEe----cCCCCEEEeecccc
Q 023270 100 YAHRGELYRELRKH---------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL----DHEGRLKIGDFGWS 166 (284)
Q Consensus 100 ~~~~~~L~~~l~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~----~~~~~~~l~d~~~~ 166 (284)
|++ ++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||++ +.++.+||+|||++
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 996 4888877532 248899999999999999999999999999999999999 45578999999998
Q ss_pred cccCCC------CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChH---------HHHHHHHh
Q 023270 167 VQSRSK------RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQK---------DTFRRIMK 230 (284)
Q Consensus 167 ~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------~~~~~~~~ 230 (284)
...... .....+++.|+|||++.+. .++.++||||+|+++++|++|.+||...... ..+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 543221 1234578899999998774 5899999999999999999999999653321 11111111
Q ss_pred cCC--------------------------CC----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 231 VDL--------------------------SF----------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 231 ~~~--------------------------~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
... .. ......+.++.+||.+||.+||.+|||++++|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000 00 0001234678899999999999999999999999998
No 221
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1e-42 Score=292.54 Aligned_cols=253 Identities=28% Similarity=0.499 Sum_probs=214.7
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
-..+||.|++|.||++....++..|++|++.... ......+.+|+..++.++|+|++++++.+..++..++++||++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 3467999999999999999999999999974332 2234568889999999999999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---CccccCC
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---RHTMCGT 179 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~~~~~~~ 179 (284)
+++|.+++.. ..++...+..++.|++.++.+||+.|++||||+|+||+++.++.++|+|||.+...... .....++
T Consensus 101 ~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 179 (292)
T cd06657 101 GGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179 (292)
T ss_pred CCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence 9999987654 46899999999999999999999999999999999999999999999999986433221 2234577
Q ss_pred CcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 180 LDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL-SFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
+.|+|||.+.+..++.++|+||+|++++++++|..||...+..+.......... .......+++.+.+++.+||..+|.
T Consensus 180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~ 259 (292)
T cd06657 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPA 259 (292)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcc
Confidence 889999999888889999999999999999999999988776665554443321 2223346789999999999999999
Q ss_pred CCCCHHhhhcCccccccCCCC
Q 023270 259 KRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 259 ~Rps~~~il~~~~~~~~~~~~ 279 (284)
+||+++++++||||.+...|.
T Consensus 260 ~R~~~~~ll~~~~~~~~~~~~ 280 (292)
T cd06657 260 QRATAAELLKHPFLAKAGPPS 280 (292)
T ss_pred cCcCHHHHhcChHHhccCCCc
Confidence 999999999999999998654
No 222
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.3e-42 Score=286.50 Aligned_cols=250 Identities=29% Similarity=0.506 Sum_probs=210.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|++.+.||.|++|.||++.+..+++.|++|.+...........+.+.+|++++++++|++++++++.+..++..++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999999899999999886433333334567889999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 99 EYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 99 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
||+++++|.+++... ..++...++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 999999999988642 45899999999999999999999999999999999999999999999999987433221
Q ss_pred -CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 173 -RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES--QKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
.....+++.|.|||.+.+..++.++|+||||++++++++|..||.... ....................++.++.+++
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 241 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLV 241 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHH
Confidence 223457788999999988889999999999999999999999996543 23344444443333323336788999999
Q ss_pred HHhcccCCCCCCCHHhhhc
Q 023270 250 SRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~ 268 (284)
.+||.++|.+|||+.+|++
T Consensus 242 ~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 242 SRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHcCCCcccCCCHHHHHH
Confidence 9999999999999999875
No 223
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.4e-43 Score=292.07 Aligned_cols=250 Identities=30% Similarity=0.547 Sum_probs=208.6
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++.+.||.|++|.||++.+..+++.|++|++....... .....+.+|+..++.++|+|++++++++.+++..++++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 688999999999999999999999999999986543222 2234567899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---cc
Q 023270 101 AHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HT 175 (284)
Q Consensus 101 ~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~ 175 (284)
++ ++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 96 58999988765 78999999999999999999999999999999999999999999999999875432211 22
Q ss_pred ccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---------------------
Q 023270 176 MCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL--------------------- 233 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--------------------- 233 (284)
..++..|+|||.+.+. .++.++|+||||+++++|++|..||...+......+......
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3457889999987664 478899999999999999999999988776554444332100
Q ss_pred C------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 234 S------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 234 ~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
. ....+.++.++.+++.+||+++|.+|||++++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0 01123577899999999999999999999999999998
No 224
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.5e-42 Score=290.01 Aligned_cols=248 Identities=30% Similarity=0.462 Sum_probs=202.1
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecC--CeEEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDD--ERIFLI 97 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~--~~~~~v 97 (284)
|++++.||.|++|.||++.+..++..|++|.+........ . ....+|+..+.++. |+|++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-Q-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-h-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999865432221 1 23346777888775 99999999999887 899999
Q ss_pred EeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--Cc
Q 023270 98 LEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RH 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~ 174 (284)
+||+++ ++.+.+... ..+++..++.++.|++.||.+||+.|++|+||+|+||+++. +.++|+|||++...... ..
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 999974 787777664 57899999999999999999999999999999999999999 99999999988543322 12
Q ss_pred cccCCCcccCccccC-CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----------------CC--
Q 023270 175 TMCGTLDYLAPEMVE-NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL----------------SF-- 235 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------------~~-- 235 (284)
...++..|+|||.+. +...+.++|+||+|+++++|++|..||...+..+.......... .+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 344678899999764 45578899999999999999999999988776554444332110 00
Q ss_pred C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 P---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 ~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+ ..+.++.++.+++.+||.++|.+||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 012468899999999999999999999999999998
No 225
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-42 Score=291.76 Aligned_cols=257 Identities=29% Similarity=0.523 Sum_probs=210.9
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+++|++.+.||.|++|+||++.+..+++.|++|.+....... ...+.+.+|+++++.++|+|++++++++..++..++|
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 468999999999999999999999999999999986543221 2335677899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccccccCCC--
Q 023270 98 LEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~~~~~~-- 172 (284)
+||++ ++|...+.... .++...++.++.||+.||.+||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 99997 47877776654 3578888999999999999999999999999999999985 457999999988543221
Q ss_pred -CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-----------------
Q 023270 173 -RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL----------------- 233 (284)
Q Consensus 173 -~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------------- 233 (284)
.....+++.|+|||.+.+. .++.++|+||+|+++++|+||..||...+..+...+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 1223457889999988664 478899999999999999999999988776665554432100
Q ss_pred ----CCC------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 234 ----SFP------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 234 ----~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.+. ..+.+++++.+++.+||+.+|++||+++++++||||++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 000 1235788999999999999999999999999999999864
No 226
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-44 Score=301.64 Aligned_cols=264 Identities=25% Similarity=0.447 Sum_probs=210.8
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEe
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFH 89 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~ 89 (284)
.....++.+.|++++.||+||.+.||+|... +...||+|++.....+. ....-+..|+.+|.+++ |.+|+++++|-.
T Consensus 353 ~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~-qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 353 NEIIKVKGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADN-QTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred CeeEEECcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCH-HHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 4567888999999999999999999999874 44556666664444333 56789999999999996 899999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~~-l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
.++.+|+|||+-+ .+|..+|++... .+.-.++.++.|++.|+.++|++||+|.||||.|+++ ..|.+||+|||++..
T Consensus 431 ~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~a 508 (677)
T KOG0596|consen 431 TDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANA 508 (677)
T ss_pred cCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcc
Confidence 9999999999975 699999987653 3334888999999999999999999999999999999 789999999999855
Q ss_pred cCCCC-----ccccCCCcccCccccCCCC-----------CCchhhHhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhc
Q 023270 169 SRSKR-----HTMCGTLDYLAPEMVENKE-----------HDYAVDNWTLGILCYEFLYGAPPFEAES-QKDTFRRIMKV 231 (284)
Q Consensus 169 ~~~~~-----~~~~~~~~y~aPE~~~~~~-----------~~~~~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~ 231 (284)
..... ....||+.|++||.+.... .++++||||||||+|+|+.|++||..-. ....+..+...
T Consensus 509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P 588 (677)
T KOG0596|consen 509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDP 588 (677)
T ss_pred cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCC
Confidence 54333 3457999999999885322 4678999999999999999999997544 33333334333
Q ss_pred CCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 232 DLSFPSAPS-ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 232 ~~~~~~~~~-~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.-..+.+.. -+.++.++++.||..||++|||+.++|+|||++-.+.|
T Consensus 589 ~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~ 636 (677)
T KOG0596|consen 589 NHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIP 636 (677)
T ss_pred CccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccccc
Confidence 221222221 23349999999999999999999999999999865443
No 227
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-42 Score=297.72 Aligned_cols=258 Identities=25% Similarity=0.438 Sum_probs=213.8
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE---- 92 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~---- 92 (284)
...+|++++.||.|++|.||++.+..++..|++|++..... .......+.+|+.+++.++|+||+++++++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 45679999999999999999999999999999999854322 2223456778999999999999999999886553
Q ss_pred --eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 93 --RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 93 --~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.+++|+|++ +++|..++.. ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 468999999 5688887764 568999999999999999999999999999999999999999999999999986655
Q ss_pred CCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------------
Q 023270 171 SKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF-------------- 235 (284)
Q Consensus 171 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------------- 235 (284)
.......+++.|+|||.+.+ ..++.++|+||||++++++++|..||...+......++.......
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 44445567889999998876 357899999999999999999999998776655444433321110
Q ss_pred ---------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 236 ---------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 236 ---------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
...+.+++++.+++.+||..||.+|||+.+++.||||+..-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 011357888999999999999999999999999999988643
No 228
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=9.5e-43 Score=298.35 Aligned_cols=261 Identities=27% Similarity=0.438 Sum_probs=213.5
Q ss_pred ccCcEe-eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH-----------HHHHHHHHHHHHHHhCCCCccccee
Q 023270 18 LQDFEI-GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY-----------KIQHQLRREMEIQSSLRHPNILRLY 85 (284)
Q Consensus 18 ~~~y~~-~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~h~~i~~~~ 85 (284)
.++|.. .+.||.|++|+||++.+..+++.|++|++........ .....+.+|+++++.++|+|+++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356764 5779999999999999999999999999854332210 0112467899999999999999999
Q ss_pred eEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 86 GWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 86 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
+++..++..++++|+++ ++|.+++.....++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence 99999999999999997 58999998878899999999999999999999999999999999999999999999999998
Q ss_pred ccccC-----------------CCCccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 023270 166 SVQSR-----------------SKRHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRR 227 (284)
Q Consensus 166 ~~~~~-----------------~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~ 227 (284)
+.... .......+++.|+|||.+.+.. ++.++|+||||++++++++|..||...+..+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 245 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 74433 1111223567899999987644 68899999999999999999999998887766555
Q ss_pred HHhcCCCCC--------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 228 IMKVDLSFP--------------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 228 ~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
+........ ..+..+.++.++|.+||+.+|++|||++++|.||||+..+.+-
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence 433111000 0123578899999999999999999999999999999886653
No 229
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.7e-42 Score=285.44 Aligned_cols=248 Identities=23% Similarity=0.390 Sum_probs=212.2
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++...+|++.+.||.|++|.||++.+. +++.|++|.+...... .+.+.+|+..+++++|+|++++++++..++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPI 76 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEecCCCe
Confidence 456678999999999999999999864 5578999998654322 34677899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++++|++++++|.+++.... .++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999998899999997654 6899999999999999999999999999999999999999999999999987544321
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. .....+..|+|||.+.+..++.++|+||||+++++|++ |..||...+.......+... ...+.....+.++.+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMPCPPGCPKELYD 235 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHH
Confidence 1 11122457999999998889999999999999999999 99999988887777766554 233445578999999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+|+..+|.+||++.++++
T Consensus 236 li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 236 IMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHhhcCcccCCCHHHHHH
Confidence 999999999999999999875
No 230
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=9.5e-43 Score=299.17 Aligned_cols=262 Identities=23% Similarity=0.404 Sum_probs=216.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
..-..++|++.+.||.|++|.||++.+..+++.|++|++....... .....+.+|+.+++.++|+|++++.+++..++.
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 10 VWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-IHAKRTYRELRLLKHMDHENVIGLLDVFTPASS 88 (343)
T ss_pred eecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-hHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence 3335778999999999999999999999999999999986543222 233556779999999999999999998766554
Q ss_pred ------EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 94 ------IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 94 ------~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.++|+|+++ ++|.+++.. ..+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus 89 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 89 LEDFQDVYLVTHLMG-ADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccccccEEEEEecCC-CCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 899999995 689888876 568999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC----------
Q 023270 168 QSRSKRHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP---------- 236 (284)
Q Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~---------- 236 (284)
..........++..|+|||.+.+. ..+.++||||||++++++++|..||...+....+..+.......+
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 167 HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred cccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccch
Confidence 655444455678889999988653 578899999999999999999999987776655554433211100
Q ss_pred -------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 237 -------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 237 -------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.....++++.+++++||+.+|.+|||+++++.||||++-.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 012358899999999999999999999999999999876544
No 231
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-42 Score=284.93 Aligned_cols=242 Identities=25% Similarity=0.465 Sum_probs=212.9
Q ss_pred eeeccCCCeEEEEEEEecC---CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeec
Q 023270 25 RPLGKGKFGRVYLVREVES---KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 101 (284)
+.||.|+||.||++.+... +..|++|.+....... ..+.+.+|++.+..++|+|++++++++..++..++++||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999876 8899999987654333 4577889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 102 HRGELYRELRKH---------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 102 ~~~~L~~~l~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++++|.+++... ..+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999885 67899999999999999999999999999999999999999999999999998554432
Q ss_pred -----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 173 -----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 173 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
.....+++.|+|||.+.+..++.++|+||+|++++++++ |..||...+..+.......+ .....+..++.++.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG-YRLPKPEYCPDELY 237 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCccCChHHH
Confidence 233446788999999988889999999999999999998 69999998888777777653 34445557899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcC
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+||..+|.+|||+++++++
T Consensus 238 ~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 238 ELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999999999875
No 232
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-42 Score=291.03 Aligned_cols=252 Identities=28% Similarity=0.424 Sum_probs=202.1
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
..+|++++.||.|++|.||++.+..++..|++|++....... ....+.+|+..++.++|+|++++++++..++..++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 478999999999999999999999999999999985433211 123456789999999999999999999999999999
Q ss_pred EeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---CC
Q 023270 98 LEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---KR 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~~ 173 (284)
+||+. +++.+++.. ...++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... ..
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 99996 577666654 35678889999999999999999999999999999999999999999999998754322 12
Q ss_pred ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcC-------------------
Q 023270 174 HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQK-DTFRRIMKVD------------------- 232 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~------------------- 232 (284)
....+++.|+|||.+.+. .++.++|+||||+++++|++|..||...+.. +.+.+.....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 233467889999998754 4788999999999999999999999765432 2222211100
Q ss_pred --CCCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 233 --LSFPS---------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 233 --~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
..... .-..+.++.+++.+|+..||++|||+++++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000 00235789999999999999999999999999998
No 233
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-42 Score=290.75 Aligned_cols=250 Identities=29% Similarity=0.539 Sum_probs=208.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
+|++.+.||.|++|.||++.+..++..|++|++...... .....+.+|+.+++.++|+|++++++++...+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 589999999999999999999999999999998654322 123456678999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC---C
Q 023270 100 YAHRGELYRELRKH---RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK---R 173 (284)
Q Consensus 100 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~---~ 173 (284)
|+++ +|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... .
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence 9985 888888654 35899999999999999999999999999999999999999999999999987533221 1
Q ss_pred ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----------------
Q 023270 174 HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF----------------- 235 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~----------------- 235 (284)
....++..|+|||.+.+. .++.++|+||||++++++++|..||...+..+...++.......
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 233467889999988654 46889999999999999999999998877666555443221000
Q ss_pred -C---------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 -P---------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 -~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+ ..+.+++++.+++..||+.||.+||+++++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 012457889999999999999999999999999998
No 234
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-42 Score=290.08 Aligned_cols=249 Identities=24% Similarity=0.453 Sum_probs=211.4
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+.-++|.+.+.||.|+||.||++... .++..+++|.+.... ......+.+|+.++++++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 45578999999999999999999853 345568999885433 2234568889999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC
Q 023270 91 DERIFLILEYAHRGELYRELRKHR-------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR 157 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~-------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~ 157 (284)
++..++|+||+++++|.+++...+ .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999997543 3899999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 023270 158 LKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKV 231 (284)
Q Consensus 158 ~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~ 231 (284)
++|+|||++....... ....+++.|+|||.+.+..++.++|+||||+++++|++ |..||......+....+..+
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999885432211 12234668999999998889999999999999999998 99999988888777777665
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 232 DLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
... .....++.++.+++.+||+.+|.+|||++++++
T Consensus 239 ~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 239 RVL-QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CcC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 432 333468899999999999999999999999854
No 235
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-44 Score=276.49 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=214.6
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
.+-.+.-+||++.+.||.|||+-|++++...+++.||+|++...... ..+..++|++..++++|||+++++++...+
T Consensus 14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~---~~e~~~rEid~~rkf~s~~vl~l~dh~l~~ 90 (302)
T KOG2345|consen 14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE---DIEEALREIDNHRKFNSPNVLRLVDHQLRE 90 (302)
T ss_pred CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchH---HHHHHHHHHHHHHhhCCcchHHHHHHHHHh
Confidence 34456778999999999999999999999999999999999876633 356788999999999999999999886544
Q ss_pred C-----eEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeEecCCCCEEE
Q 023270 92 E-----RIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHENH--VIHRDIKPENLLLDHEGRLKI 160 (284)
Q Consensus 92 ~-----~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~g--i~H~dl~p~nil~~~~~~~~l 160 (284)
. ..|++++|...|+|.+.+... ..+++.+++.++.++.+||++||+.. +.|+||||.||++..++.+++
T Consensus 91 ~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 91 EKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred hccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEE
Confidence 3 489999999999999999764 26899999999999999999999999 999999999999999999999
Q ss_pred eecccccccCCCC------------ccccCCCcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCC--ChHH
Q 023270 161 GDFGWSVQSRSKR------------HTMCGTLDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAE--SQKD 223 (284)
Q Consensus 161 ~d~~~~~~~~~~~------------~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~--~~~~ 223 (284)
.|||.++...-.- ....++..|+|||.+. +...+.++|||||||++|.++.|..||+.. ....
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS 250 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS 250 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe
Confidence 9999874432111 1234688999999985 445789999999999999999999999632 2222
Q ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 224 TFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+.-....+...++....+|..+.++|++||+.||.+||++.+++.+
T Consensus 251 laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 251 LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 2333444567777778899999999999999999999999999875
No 236
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2e-42 Score=285.50 Aligned_cols=247 Identities=23% Similarity=0.406 Sum_probs=210.2
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|++.+.||.|++|+||++... ++..+++|.+...... ...+.+|+..++.++|+||+++++++...+..++
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 5678999999999999999999764 3456999988644322 2457789999999999999999999998899999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
+|||+.+++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999999999999765 468999999999999999999999999999999999999999999999999875332211
Q ss_pred --ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 --HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....++..|.|||.+.+..++.++|+||||+++++|++ |..||...+..+.......... .......+..+.+++.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~ 235 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-LYRPHLASEKVYAIMY 235 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHH
Confidence 12234567999999988889999999999999999998 9999988887777776665533 3334467899999999
Q ss_pred HhcccCCCCCCCHHhhhcC
Q 023270 251 RLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~ 269 (284)
+||..+|.+||++.+++++
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHcCCCcccCCCHHHHHHh
Confidence 9999999999999999865
No 237
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.6e-42 Score=290.82 Aligned_cols=248 Identities=23% Similarity=0.378 Sum_probs=208.2
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCc--eEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKH--PVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~ 95 (284)
++|++.+.||.|+||.||++.+..++. .+++|.+.... .....+.+.+|+.++.++ +|+|++++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 689999999999999999998877765 36788775321 112245678899999999 7999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEE
Q 023270 96 LILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~ 159 (284)
+++||+++++|.+++.... .++...++.++.|++.||.+||+.|++|+||+|+||+++.++.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997542 478899999999999999999999999999999999999999999
Q ss_pred EeecccccccCCCCcc--ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCC
Q 023270 160 IGDFGWSVQSRSKRHT--MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFP 236 (284)
Q Consensus 160 l~d~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (284)
|+|||++......... ...+..|+|||.+.+..++.++||||||+++++|++ |..||...+..+......... ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~-~~~ 238 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RME 238 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CCC
Confidence 9999987533221111 123457999999988889999999999999999997 999999888888777766542 333
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 237 SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.+..++.++.+|+.+||..+|.+|||++++++.
T Consensus 239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 445689999999999999999999999999765
No 238
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.1e-42 Score=288.69 Aligned_cols=248 Identities=29% Similarity=0.496 Sum_probs=203.2
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHH---HHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQL---RREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~---~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
.||.|+||.||++.+..+++.|++|.+.............. ...++.++...|++++++.+++..++..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999999999999999999865433221111112 223345556689999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-CCccccCCCc
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-KRHTMCGTLD 181 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~~ 181 (284)
+++|..++...+.+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++..... ......++..
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 160 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 160 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence 999999998888899999999999999999999999999999999999999999999999998754322 2234467899
Q ss_pred ccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCC
Q 023270 182 YLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAES---QKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDS 257 (284)
Q Consensus 182 y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (284)
|+|||.+.++ .++.++|+||+|+++++|++|..||.... .......... .....+..+++++.+++.+||..+|
T Consensus 161 y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~l~~~p 238 (278)
T cd05606 161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSPELRSLLEGLLQRDV 238 (278)
T ss_pred CcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--cCCCCCCcCCHHHHHHHHHHhhcCH
Confidence 9999998754 58899999999999999999999998763 2332222222 2233344679999999999999999
Q ss_pred CCCC-----CHHhhhcCcccccc
Q 023270 258 SKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 258 ~~Rp-----s~~~il~~~~~~~~ 275 (284)
.+|| +++++++||||++.
T Consensus 239 ~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 239 NRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HhccCCCCCCHHHHHhCccccCC
Confidence 9999 99999999999775
No 239
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-42 Score=290.65 Aligned_cols=253 Identities=29% Similarity=0.467 Sum_probs=205.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCe----
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDER---- 93 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~---- 93 (284)
.+|++.+.||.|++|.||++.+..+++.|++|.+...... ......+.+|+.+++.+. |+|++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 4799999999999999999999999999999997553221 122346778999999995 6999999999876665
Q ss_pred -EEEEEeecCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccc
Q 023270 94 -IFLILEYAHRGELYRELRKH-----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWS 166 (284)
Q Consensus 94 -~~~v~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~ 166 (284)
.|+++||+++ +|..++... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999985 788877543 35799999999999999999999999999999999999998 889999999987
Q ss_pred cccCC---CCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-------
Q 023270 167 VQSRS---KRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF------- 235 (284)
Q Consensus 167 ~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~------- 235 (284)
..... ......+++.|.|||.+.+ ..++.++|+||||+++++|++|..||...+..+...++.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (295)
T cd07837 159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG 238 (295)
T ss_pred eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 53322 1122345778999998865 447899999999999999999999998877666555443311000
Q ss_pred -------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 236 -------------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 236 -------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
...+.++.++.++|.+||.+||.+||++++++.||||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 00135788999999999999999999999999999995
No 240
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-42 Score=286.86 Aligned_cols=248 Identities=23% Similarity=0.410 Sum_probs=214.1
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
-.-.+|++.+.||.|++|.||++.+.. +..+++|.+...... ....+..|+.+++.++|+|++++++++..++..+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY 78 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE
Confidence 345679999999999999999999877 889999998654332 2356788999999999999999999999999999
Q ss_pred EEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC
Q 023270 96 LILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 173 (284)
+|+||+++++|.+++... ..++...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999999999764 468999999999999999999999999999999999999999999999999875432221
Q ss_pred ---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 174 ---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 174 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+........ ...+.+..+++++.+++
T Consensus 159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i 237 (261)
T cd05148 159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-YRMPCPAKCPQEIYKIM 237 (261)
T ss_pred ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-CcCCCCCCCCHHHHHHH
Confidence 12234567999999988889999999999999999998 89999988887777776654 34455568899999999
Q ss_pred HHhcccCCCCCCCHHhhhc
Q 023270 250 SRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~ 268 (284)
.+||..||.+|||+.++++
T Consensus 238 ~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 238 LECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHcCCCchhCcCHHHHHH
Confidence 9999999999999999875
No 241
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=304.42 Aligned_cols=262 Identities=34% Similarity=0.620 Sum_probs=240.4
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
...-+...|.+.+.||.|.|++|.++.+..++..||||.+++........ +.+.+|++++..++||||++++.+.+.+.
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~-~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKR-QKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHH-HHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 34456778999999999999999999999999999999998888776554 44889999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc--C
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS--R 170 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~--~ 170 (284)
.+|+||||+.++.+.+++.+++...+..+..++.|++.|++|||+++|+|+|||++||+++.+-++||+|||++... .
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc
Confidence 99999999999999999999999889999999999999999999999999999999999999999999999998544 3
Q ss_pred CCCccccCCCcccCccccCCCCC-CchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 171 SKRHTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
......+|++.|.|||++.+..+ .+..|+||+|+++|.|++|.+||.+.+..++....+.+.+..+. .++-+.+++|
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~--~ms~dce~lL 286 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF--YMSCDCEDLL 286 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc--eeechhHHHH
Confidence 44467789999999999998886 58999999999999999999999999999999999998887777 6899999999
Q ss_pred HHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 250 SRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+++|..+|.+|+++++++.|.|.-...+
T Consensus 287 rk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 287 RKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred HHhhccCccccCCHHHhhhhcccchhhh
Confidence 9999999999999999999999865543
No 242
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3e-42 Score=287.41 Aligned_cols=253 Identities=19% Similarity=0.328 Sum_probs=213.6
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCC-----ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESK-----HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
+++..++|++.+.||.|+||.||++.+.... ..|++|.+...... .....+.+++.+++.++|+|++++++++
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~ 78 (277)
T cd05032 1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNEASVMKEFNCHHVVRLLGVV 78 (277)
T ss_pred CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH--HHHHHHHHHHHHHHhCCCCceeEEEEEE
Confidence 3567789999999999999999999886544 78999998544322 2235677899999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCE
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHR----------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~ 158 (284)
..++..++|+||+++++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.+
T Consensus 79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE
Confidence 99999999999999999999986532 36788899999999999999999999999999999999999999
Q ss_pred EEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC
Q 023270 159 KIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVD 232 (284)
Q Consensus 159 ~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~ 232 (284)
+|+|||++...... .....++..|.|||.+.+...+.++||||||++++++++ |..||...+..+........
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~- 237 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG- 237 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-
Confidence 99999987543221 122335678999999988889999999999999999998 99999988887777766643
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 233 LSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.....+...+.++.+++.+||..+|++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 238 GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 3344455689999999999999999999999999863
No 243
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.6e-42 Score=287.56 Aligned_cols=259 Identities=20% Similarity=0.354 Sum_probs=213.9
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
+++...+|++.+.||.|+||.||++.... .+..|++|.+...... .....+.+|+..++.++|+|++++++++
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~ 78 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVV 78 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 35667899999999999999999987542 3557999987543322 2234567899999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCE
Q 023270 89 HDDERIFLILEYAHRGELYRELRKH----------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~----------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~ 158 (284)
...+..++||||+++++|.+++... ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.+
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence 9999999999999999999999753 234677889999999999999999999999999999999999999
Q ss_pred EEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC
Q 023270 159 KIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVD 232 (284)
Q Consensus 159 ~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~ 232 (284)
+|+|||++....... ....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+....+..+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 238 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 238 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999875322111 11234567999999988889999999999999999998 789998888777766665543
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc------Ccccccc
Q 023270 233 LSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME------HPWIIKN 275 (284)
Q Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~------~~~~~~~ 275 (284)
. ...+...++.+.+++.+||+.+|++|||+.++++ ||||+..
T Consensus 239 ~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 239 Y-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred C-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 2 2233467899999999999999999999999998 8999764
No 244
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.7e-42 Score=287.94 Aligned_cols=251 Identities=19% Similarity=0.366 Sum_probs=211.0
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEe----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREV----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
+.+.+|++.+.||+|+||+||++... .++..+++|.+...... .....+.+|+.+++.++|+|++++++++..+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP--QQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 45789999999999999999999853 35577999998643322 2345778899999999999999999999999
Q ss_pred CeEEEEEeecCCCchHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC
Q 023270 92 ERIFLILEYAHRGELYRELRKH-----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH 154 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~ 154 (284)
+..+++|||+++++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 9999999999999999998532 24788889999999999999999999999999999999999
Q ss_pred CCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 023270 155 EGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRI 228 (284)
Q Consensus 155 ~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~ 228 (284)
++.++|+|||++...... .....++..|+|||.+.+..++.++|+||||+++++|++ |..||......+.....
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999998543221 122234567999999988889999999999999999998 99999887776666655
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 229 MKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.... ..+.+..+++++.+++.+||+.+|.+||++.+++++
T Consensus 240 ~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 240 RKRQ-LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HcCC-cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 5433 344455789999999999999999999999999875
No 245
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=303.13 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=226.7
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCCc---e-EEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESKH---P-VALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~-v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
.+++.-.+-.+.++||+|+||.||++.....+. . ||+|..............++.+|++++++++|+||++++|+.
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 355666667778999999999999998876533 3 899998764544556678999999999999999999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.....+++|||+|.+|+|.++|+..+ .++..+...++.+.+.||.|||+.+++|+||..+|+|++.++.+||+|||++.
T Consensus 231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 231 VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 99999999999999999999999987 59999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCc---cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 168 QSRSKRH---TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 168 ~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
....... ...-+..|+|||.+..+.++.++||||||+++||+++ |..||.+....+...++.......+.+...|.
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~ 390 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPK 390 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHH
Confidence 5531111 1134678999999999999999999999999999998 89999999999999999887778888888999
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
++..++.+|+..+|++|||+.++.+
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHH
Confidence 9999999999999999999998865
No 246
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=282.95 Aligned_cols=252 Identities=34% Similarity=0.598 Sum_probs=216.3
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEEeecC
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
...||+|+++.|-.+....++..||||++.+.... ....+.+|++++.+.+ |+||+.++++|+++..+|+|||.+.
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gH---sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~ 159 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGH---SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR 159 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCch---HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence 45689999999999999999999999999776322 3467778999999985 9999999999999999999999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC---CEEEeecccccccC---------
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKIGDFGWSVQSR--------- 170 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~---~~~l~d~~~~~~~~--------- 170 (284)
||+|...|...+.+++.++.+++.+|+.||.+||.+||.|+|+||+|||....+ .+||+||.+.....
T Consensus 160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999997665 59999998852211
Q ss_pred -CCCccccCCCcccCccccC---C--CCCCchhhHhhHHHHHHHHHhCCCCCCCCC---------------hHHHHHHHH
Q 023270 171 -SKRHTMCGTLDYLAPEMVE---N--KEHDYAVDNWTLGILCYEFLYGAPPFEAES---------------QKDTFRRIM 229 (284)
Q Consensus 171 -~~~~~~~~~~~y~aPE~~~---~--~~~~~~~Di~slG~il~~l~tg~~p~~~~~---------------~~~~~~~~~ 229 (284)
.....++|+..|+|||+.. + ..|+.+.|+||||+++|-|+.|++||.+.- ...+.+.+.
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ 319 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 319 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence 1112355777899999763 3 237899999999999999999999997642 234566677
Q ss_pred hcCCCCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 230 KVDLSFPS--APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 230 ~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.+.+.++. +..+|.+.+++++.+|..++.+|.++.++++|||++.+...
T Consensus 320 EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 320 EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 77777776 34799999999999999999999999999999999988654
No 247
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.6e-43 Score=299.15 Aligned_cols=259 Identities=25% Similarity=0.436 Sum_probs=211.1
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe----cCCeE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH----DDERI 94 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~----~~~~~ 94 (284)
.+|++.+.||.|++|.||++.+..+++.|++|++..... .......+.+|+.+++.++|+||+++++++. .....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 789999999999999999999999999999999865322 1223456678999999999999999999875 33578
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC-
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR- 173 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 173 (284)
++|+||+. ++|.+++.....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99999996 5899999888889999999999999999999999999999999999999999999999999874332111
Q ss_pred ------ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh----------------
Q 023270 174 ------HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK---------------- 230 (284)
Q Consensus 174 ------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~---------------- 230 (284)
....++..|.|||.+.+ ..++.++|+||||+++++|++|..||...+....+..+..
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 242 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD 242 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence 23357788999998765 4588999999999999999999999977654332221111
Q ss_pred -------cCCCCCC------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 231 -------VDLSFPS------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 231 -------~~~~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
....... .+..++++.++|.+||+.+|.+|||+++++.||||.+-+.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD 304 (334)
T ss_pred hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence 0000000 134688999999999999999999999999999998776553
No 248
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=308.50 Aligned_cols=253 Identities=28% Similarity=0.485 Sum_probs=220.8
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|.|+..||.|+||.||+|..+.++-..|.|++.. .+.+.+..+.-|+.++..++||+|+++++.|.-++.++++.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 6788999999999999999998888888998843 3445578888999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccc
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTM 176 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~ 176 (284)
|+||-....+..- ..|++.++..++.|++.||.|||+++|+|+||+..|||++.+|.++|.|||.+... .......
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF 190 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF 190 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence 9999998877654 57999999999999999999999999999999999999999999999999987332 2233456
Q ss_pred cCCCcccCcccc-----CCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHH
Q 023270 177 CGTLDYLAPEMV-----ENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-APSISAEAKHLIS 250 (284)
Q Consensus 177 ~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~ 250 (284)
.|+|.|+|||+. ...+|+.++||||||+++.+|..+.+|....++...+-++-+..++.-. +..-+..+.+|+.
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk 270 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLK 270 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHH
Confidence 799999999986 4677899999999999999999999999888888777777665433322 3356778999999
Q ss_pred HhcccCCCCCCCHHhhhcCccccccC
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.||..||+.||+++++|+||||++.+
T Consensus 271 ~cL~Knp~~Rp~aaqll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 271 RCLVKNPRNRPPAAQLLKHPFVQNAP 296 (1187)
T ss_pred HHHhcCCccCCCHHHHhhCcccccCC
Confidence 99999999999999999999999764
No 249
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-42 Score=297.57 Aligned_cols=259 Identities=26% Similarity=0.442 Sum_probs=211.0
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----C
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD-----E 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~-----~ 92 (284)
.++|++.+.||.|++|+||++.+..+++.|++|.+....... .....+.+|+.+++.++|+|++++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 457999999999999999999999999999999986532222 2234566799999999999999999987644 3
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
..++++||+. ++|.+++...+.++...++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 5899999996 689999988888999999999999999999999999999999999999999999999999988544322
Q ss_pred ---CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----------------
Q 023270 173 ---RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV----------------- 231 (284)
Q Consensus 173 ---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----------------- 231 (284)
.....++..|+|||.+.+ ..++.++|+||||+++++|++|..||...+.......+...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 123456788999998765 45889999999999999999999999776543322221110
Q ss_pred ------CCC------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 232 ------DLS------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 232 ------~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
... ....+.+++++.+++.+||+.+|++|||++++++||||....++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 000 00123578899999999999999999999999999999876544
No 250
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.6e-42 Score=283.84 Aligned_cols=250 Identities=24% Similarity=0.393 Sum_probs=213.0
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecC---CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVES---KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
..++|++.+.||+|+||+||+|....+ ...|++|.+..... ......+.+|+..++.++|+|++++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS--DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence 457899999999999999999988654 45789998865432 2234567889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 94 IFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.++++||+++++|.+++... +.++...++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999999765 47899999999999999999999999999999999999999999999999998554311
Q ss_pred C-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 173 R-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 173 ~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
. ....++..|+|||.+.+..++.++|+||||++++++++ |..||......+....+.... ..+.+...++.+.
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 238 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-RLPPPMDCPSALY 238 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHH
Confidence 1 11223567999999998889999999999999999997 999998888877777666543 3334457899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcC
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+||..+|++||++++++++
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999999999999875
No 251
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.7e-42 Score=287.04 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=211.2
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+..++|++.+.||+|++|.||+|.+.. ++..|++|.+...... .....+..|+.+++.++|+|++++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE--QDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 445779999999999999999999877 6778999988543322 223567789999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC---CEEE
Q 023270 91 DERIFLILEYAHRGELYRELRKHR-------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKI 160 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~---~~~l 160 (284)
.+..++|+||+++++|.+++.... .+++..++.++.||+.++.|||+.|++|+||+|+||+++.++ .++|
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999999997653 488999999999999999999999999999999999998765 5999
Q ss_pred eecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCC
Q 023270 161 GDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLS 234 (284)
Q Consensus 161 ~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~ 234 (284)
+|||++....... .....+..|+|||.+.+..++.++||||||+++++|++ |..||...+..+....+... ..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~ 239 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GR 239 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-Cc
Confidence 9999875432111 12223467999999988889999999999999999996 99999988877766655443 33
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 235 FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
...+..++.++.+++.+||..+|.+|||++++++|
T Consensus 240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 44455789999999999999999999999999986
No 252
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-42 Score=282.24 Aligned_cols=241 Identities=25% Similarity=0.426 Sum_probs=204.5
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
+.||+|+||.||++.+..+++.|++|.+..... ......+.+|+++++.++|+||+++++++..++..++|+||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP--PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 468999999999999999999999998754321 223457888999999999999999999999999999999999999
Q ss_pred chHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc-----cccC
Q 023270 105 ELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH-----TMCG 178 (284)
Q Consensus 105 ~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~-----~~~~ 178 (284)
+|.+++...+ .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........ ....
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 9999997654 689999999999999999999999999999999999999999999999998754322111 1122
Q ss_pred CCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCC
Q 023270 179 TLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDS 257 (284)
Q Consensus 179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (284)
+..|+|||.+.++.++.++|+||||++++++++ |..||...+........... .....+...+..+.+++.+||..+|
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p 237 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-VRLPCPELCPDAVYRLMERCWEYDP 237 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-CCCCCcccCCHHHHHHHHHHcCCCh
Confidence 456999999988889999999999999999997 99999887776665555543 2334455788999999999999999
Q ss_pred CCCCCHHhhhc
Q 023270 258 SKRLSLQKIME 268 (284)
Q Consensus 258 ~~Rps~~~il~ 268 (284)
.+|||+.++++
T Consensus 238 ~~Rps~~~~~~ 248 (252)
T cd05084 238 GQRPSFSTVHQ 248 (252)
T ss_pred hhCcCHHHHHH
Confidence 99999999975
No 253
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.3e-42 Score=317.65 Aligned_cols=252 Identities=25% Similarity=0.404 Sum_probs=207.9
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+++|++.+.||.|+||.||+|.+..+++.||+|++...........+.+.+|+++++.++|||++++++++.+++..+++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 47899999999999999999999999999999998654433344456788999999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 98 LEYAHRGELYRELRKH-----------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~-----------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
|||+++++|.+++.+. ..++...++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999988642 23456778899999999999999999999999999999999999999999987
Q ss_pred cccCC---------------------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHH
Q 023270 167 VQSRS---------------------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTF 225 (284)
Q Consensus 167 ~~~~~---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~ 225 (284)
..... ......|++.|+|||.+.+..++.++||||||+++++|+||..||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 54310 011235899999999999999999999999999999999999999876554433
Q ss_pred HHHH-hcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 226 RRIM-KVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 226 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.... ...........+|+.+.+++.+||..||++||+..+.+..
T Consensus 241 ~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 241 YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2211 1111112223688999999999999999999876665543
No 254
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.7e-42 Score=282.67 Aligned_cols=246 Identities=24% Similarity=0.427 Sum_probs=210.2
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe-cCCe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH-DDER 93 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~-~~~~ 93 (284)
-+.+.+|++.+.||+|++|.||++.. .+..+++|.+.... ..+.+.+|+.+++.++|++++++++++. .++.
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 74 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence 35678999999999999999999875 47789999985432 1346788999999999999999999754 5567
Q ss_pred EEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 94 IFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
.++++||+++++|.+++...+ .++...++.++.|++.+|.+||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 899999999999999997654 478999999999999999999999999999999999999999999999998865444
Q ss_pred CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 172 KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
.......+..|+|||++.+..++.++||||||+++++|++ |..||...+..+....+... ......+.+++.+.+++.
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 233 (256)
T cd05082 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPVVYDVMK 233 (256)
T ss_pred cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence 3334445678999999988889999999999999999997 99999888777776666554 233445578999999999
Q ss_pred HhcccCCCCCCCHHhhhc
Q 023270 251 RLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (284)
+||..+|++|||++++++
T Consensus 234 ~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 234 QCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHhcCChhhCcCHHHHHH
Confidence 999999999999999975
No 255
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.9e-42 Score=285.80 Aligned_cols=252 Identities=21% Similarity=0.356 Sum_probs=209.5
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
.+.-++|++.+.||+|++|.||++.+.. ++..|++|++...... .....+.+|+.+++.++|+|++++++++.
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~ 79 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3456789999999999999999987643 3567999998543221 22356778999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEE
Q 023270 90 DDERIFLILEYAHRGELYRELRKHR----------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~----------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~ 159 (284)
.++..++|+||+++++|.+++.+.. .++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 9999999999999999999987532 357788899999999999999999999999999999999999999
Q ss_pred EeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCC
Q 023270 160 IGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDL 233 (284)
Q Consensus 160 l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~ 233 (284)
|+|||++....... ....+++.|+|||.+.+..++.++|+||||++++++++ |..||...+..+..........
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99999875332211 12234677999999998889999999999999999998 7899988887777766555432
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 234 SFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
...+...++.+.+++.+||..+|++|||+.+++++
T Consensus 240 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 240 -LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 23344688999999999999999999999999864
No 256
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.4e-42 Score=292.49 Aligned_cols=254 Identities=26% Similarity=0.453 Sum_probs=202.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE---- 92 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~---- 92 (284)
.+.+|++.+.||+|++|.||+|.+..+++.|++|.+....... .....+.+|++++++++|+|++++++++...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 4568999999999999999999999999999999885433221 11234567899999999999999999886543
Q ss_pred ----eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 93 ----RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 93 ----~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
..++|+||+++ +|...+... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 45999999974 788777654 378999999999999999999999999999999999999999999999999874
Q ss_pred ccCCCC-------ccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-----
Q 023270 168 QSRSKR-------HTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS----- 234 (284)
Q Consensus 168 ~~~~~~-------~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~----- 234 (284)
...... ....++..|+|||.+.+.. ++.++|+||||+++++|++|..||...+.......+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 332111 1234577899999886654 688999999999999999999999877665443332221000
Q ss_pred --------------CCC-----------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 235 --------------FPS-----------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 235 --------------~~~-----------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
.+. ....+..+.++|.+||..||.+|||++++|+||||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 000 00135678899999999999999999999999998
No 257
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2e-42 Score=296.26 Aligned_cols=254 Identities=24% Similarity=0.422 Sum_probs=206.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeE
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGW 87 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~ 87 (284)
+++...+|++.+.||.|+||.||+|.+.. +++.|++|++...... ...+.+.+|+.++.++ +|+||++++++
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA--SEYKALMTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH--HHHHHHHHHHHHHHhhccCcchhheeee
Confidence 34445599999999999999999997543 3578999998643322 2235667899999999 79999999998
Q ss_pred EecC-CeEEEEEeecCCCchHHHHHhc-----------------------------------------------------
Q 023270 88 FHDD-ERIFLILEYAHRGELYRELRKH----------------------------------------------------- 113 (284)
Q Consensus 88 ~~~~-~~~~~v~e~~~~~~L~~~l~~~----------------------------------------------------- 113 (284)
+... ..+++++||+++++|.+++...
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 7644 5789999999999999988542
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----CccccCCC
Q 023270 114 --------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTL 180 (284)
Q Consensus 114 --------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~ 180 (284)
..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... .....++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 25788999999999999999999999999999999999999999999999988543211 11223456
Q ss_pred cccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 023270 181 DYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSK 259 (284)
Q Consensus 181 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 259 (284)
.|+|||.+.+..++.++||||||++++++++ |..||......+..............+...++++.+++.+||+.+|++
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~ 319 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPED 319 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhh
Confidence 7999999999999999999999999999998 999998765544444444443344444567899999999999999999
Q ss_pred CCCHHhhhcC
Q 023270 260 RLSLQKIMEH 269 (284)
Q Consensus 260 Rps~~~il~~ 269 (284)
||+++++++|
T Consensus 320 RPs~~ell~~ 329 (337)
T cd05054 320 RPTFSELVEI 329 (337)
T ss_pred CcCHHHHHHH
Confidence 9999999986
No 258
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.4e-42 Score=289.67 Aligned_cols=256 Identities=28% Similarity=0.432 Sum_probs=207.1
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~ 96 (284)
..+|...+.||.|+||.||++.+..++..|++|.+...... .....+.+|+..+.++. |+|++++++++..++..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 45778889999999999999999999999999998654333 23456778888888886 9999999999999999999
Q ss_pred EEeecCCCchHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 97 ILEYAHRGELYRELR-----KHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 97 v~e~~~~~~L~~~l~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
++|+++. ++.++.. ....+++..+..++.+++.|+.|||+. |++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9999864 5554332 235789999999999999999999975 99999999999999999999999999874332
Q ss_pred C--CCccccCCCcccCccccCCC---CCCchhhHhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcCCC---CCCCCCC
Q 023270 171 S--KRHTMCGTLDYLAPEMVENK---EHDYAVDNWTLGILCYEFLYGAPPFEAESQ-KDTFRRIMKVDLS---FPSAPSI 241 (284)
Q Consensus 171 ~--~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~~ 241 (284)
. ......++..|+|||.+.+. .++.++|+||+|++++++++|..||..... .+...+....... ...+..+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREF 239 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCcc
Confidence 2 22233578889999998776 588999999999999999999999976542 2223333222111 1112247
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
+.++.+|+++||..+|.+|||+++++.||||++..
T Consensus 240 ~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 240 SPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence 89999999999999999999999999999998753
No 259
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.5e-42 Score=288.03 Aligned_cols=250 Identities=24% Similarity=0.450 Sum_probs=211.7
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
++..+|.+.+.||+|++|.||++.+.. ++..+++|.+..... ...+.+.+|+..++.++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHIVKFYGVCGD 78 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCCCCCcceEEEEEcc
Confidence 567889999999999999999998543 445688998854332 223567889999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC
Q 023270 91 DERIFLILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH 154 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~ 154 (284)
++..++||||+++++|.+++.... .+++..++.++.||+.|+.+||++|++|+||+|+||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999999999999997643 3788999999999999999999999999999999999999
Q ss_pred CCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 023270 155 EGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRI 228 (284)
Q Consensus 155 ~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~ 228 (284)
++.++|+|||++...... .....++..|+|||.+.+..++.++||||||+++++|++ |..||...+..+.....
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999988543322 122335678999999998889999999999999999998 99999888887777766
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 229 MKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
..+... ......+..+.+++.+||..+|.+|||+.++++.
T Consensus 239 ~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 239 TQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred hCCCCC-CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 554332 2334678999999999999999999999999763
No 260
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.6e-42 Score=283.90 Aligned_cols=247 Identities=22% Similarity=0.404 Sum_probs=210.1
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|++.+.||.|++|.||++.+. ++..+++|.+....... ..+.+|+.+++.++|+|++++++++...+..++
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSE----DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFI 76 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCH----HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEE
Confidence 4568999999999999999999875 56789999985433222 356679999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
|+||+++++|.+++... ..+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~ 156 (256)
T cd05059 77 VTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT 156 (256)
T ss_pred EEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence 99999999999999764 468999999999999999999999999999999999999999999999999875433221
Q ss_pred --ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 --HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+........ .....+...+.++.+++.
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 235 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRLYRPKLAPTEVYTIMY 235 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHH
Confidence 11123457999999998889999999999999999998 89999888877777666554 333444568999999999
Q ss_pred HhcccCCCCCCCHHhhhcC
Q 023270 251 RLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~ 269 (284)
+||..+|++|||++++++.
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHhcCChhhCcCHHHHHHH
Confidence 9999999999999999864
No 261
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-42 Score=299.79 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=210.7
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecC-----CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCccccee
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVES-----KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLY 85 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~ 85 (284)
..+++...+|++.+.||.|+||.||++.+... +..||+|++...... ...+.+.+|+++++.+. ||||++++
T Consensus 30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~~l~~l~~HpnIv~l~ 107 (400)
T cd05105 30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS--SEKQALMSELKIMTHLGPHLNIVNLL 107 (400)
T ss_pred CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence 45677788899999999999999999987433 346999998643322 23467889999999996 99999999
Q ss_pred eEEecCCeEEEEEeecCCCchHHHHHhc----------------------------------------------------
Q 023270 86 GWFHDDERIFLILEYAHRGELYRELRKH---------------------------------------------------- 113 (284)
Q Consensus 86 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~---------------------------------------------------- 113 (284)
+++...+..++||||+++++|.+++..+
T Consensus 108 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 108 GACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred EEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 9999999999999999999999887542
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 023270 114 --------------------------------------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPEN 149 (284)
Q Consensus 114 --------------------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~n 149 (284)
..++...+..++.|++.||.|||+.|++|+||+|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~N 267 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARN 267 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHh
Confidence 136778889999999999999999999999999999
Q ss_pred eEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHH
Q 023270 150 LLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKD 223 (284)
Q Consensus 150 il~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~ 223 (284)
|+++.++.++|+|||++...... .....+++.|+|||.+.+..++.++||||||+++++|++ |..||.......
T Consensus 268 ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 268 VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 99999999999999997543221 122345678999999988889999999999999999997 999998765554
Q ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 224 TFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.................++.++.+++.+||..+|++|||+.++.+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 444444444444555678999999999999999999999998875
No 262
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-44 Score=306.12 Aligned_cols=253 Identities=23% Similarity=0.405 Sum_probs=219.4
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
...+++-..+..+..+||+|.||+||++.+-+ .||||++........ ..+.|+.|+..+++-+|.||+-+.|++..
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 46788888999999999999999999998754 599999977655543 68999999999999999999999999998
Q ss_pred CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
++. .||+-+|+|.+|...+.-. -++.....+.|++|+++|+.|||.++|+|+|||.+||++..++.|||+|||++...
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 887 9999999999999998765 46899999999999999999999999999999999999999999999999998443
Q ss_pred C-----CCCccccCCCcccCccccCC---CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---C
Q 023270 170 R-----SKRHTMCGTLDYLAPEMVEN---KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---A 238 (284)
Q Consensus 170 ~-----~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 238 (284)
. .......|...|+|||+++. .+|++.+||||||+++|||++|..||.....+.++...-++...... .
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence 2 22344567788999999864 45899999999999999999999999987777777766666333322 3
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 239 PSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
...++++++|+..||..++++||++.+||.
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 467889999999999999999999999998
No 263
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.7e-42 Score=283.27 Aligned_cols=248 Identities=21% Similarity=0.397 Sum_probs=208.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++..++|++.++||.|++|.||+|.+..+ ..|++|.+...... ...+.+|+++++.++|+|++++++.+. ++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPI 75 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCc
Confidence 45567899999999999999999987655 46999998653322 245778999999999999999999774 4568
Q ss_pred EEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++|+||+++++|.+++... ..++...++.++.+++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999999999999764 35789999999999999999999999999999999999999999999999987543222
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. ....++..|+|||...+..++.++|+||||++++++++ |..||......+......... ..+....++..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 234 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RMPCPPECPESLHD 234 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CCCCccccCHHHHH
Confidence 1 12335667999999988889999999999999999999 899999888877777665543 33344578999999
Q ss_pred HHHHhcccCCCCCCCHHhhhcC
Q 023270 248 LISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~~ 269 (284)
++.+|+..+|.+||+++++++.
T Consensus 235 li~~~l~~~p~~Rp~~~~~~~~ 256 (262)
T cd05071 235 LMCQCWRKEPEERPTFEYLQAF 256 (262)
T ss_pred HHHHHccCCcccCCCHHHHHHH
Confidence 9999999999999999998763
No 264
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-43 Score=314.36 Aligned_cols=256 Identities=24% Similarity=0.437 Sum_probs=228.9
Q ss_pred hhhhcccccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccc
Q 023270 9 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILR 83 (284)
Q Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~ 83 (284)
.+....++..++-...+.||+|.||.||+++-.+ ....||||.++... +....++|++|++++..++|+|||+
T Consensus 476 ~~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVr 553 (774)
T KOG1026|consen 476 PDLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVR 553 (774)
T ss_pred CccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEE
Confidence 4566778889999999999999999999998654 33459999986544 3345689999999999999999999
Q ss_pred eeeEEecCCeEEEEEeecCCCchHHHHHhcC----------C----CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 023270 84 LYGWFHDDERIFLILEYAHRGELYRELRKHR----------R----FTEQQAATYIASLTNALAYCHENHVIHRDIKPEN 149 (284)
Q Consensus 84 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------~----l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~n 149 (284)
++|+|.+++..++|+||+..|+|.++|.... . |+..+.+.|+.||+.|+.||-++.+||+||..+|
T Consensus 554 LlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN 633 (774)
T KOG1026|consen 554 LLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN 633 (774)
T ss_pred EEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence 9999999999999999999999999996532 2 8899999999999999999999999999999999
Q ss_pred eEecCCCCEEEeecccccccCCCCc-----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHH
Q 023270 150 LLLDHEGRLKIGDFGWSVQSRSKRH-----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKD 223 (284)
Q Consensus 150 il~~~~~~~~l~d~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~ 223 (284)
+|+.++-.|||+|||+++..-+... ...-+.+|+|||.+..+.++.+|||||+|++|||+++ |..||.+.+..+
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E 713 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE 713 (774)
T ss_pred ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence 9999999999999999966544332 2334678999999999999999999999999999997 999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhh
Q 023270 224 TFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIM 267 (284)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 267 (284)
.++-+..+.. ++.+..+|.++.+|+..||+.+|++|||+.+|=
T Consensus 714 VIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 714 VIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 9999999987 888889999999999999999999999999873
No 265
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=7.6e-42 Score=291.72 Aligned_cols=261 Identities=29% Similarity=0.466 Sum_probs=213.1
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec-CCeEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD-DERIF 95 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~-~~~~~ 95 (284)
.-++|++.+.||.|+||.||++.+..+++.|++|++....... ...+.+..|+.+++.++|||++++.+++.. ++..+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-VLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 4568999999999999999999999999999999875432221 234567789999999999999999998865 55789
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcc
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT 175 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 175 (284)
+++||++ ++|..++.. ..++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 87 lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 164 (328)
T cd07856 87 FVTELLG-TDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG 164 (328)
T ss_pred EEeehhc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCC
Confidence 9999995 588877764 46788899999999999999999999999999999999999999999999998655444444
Q ss_pred ccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----------------------
Q 023270 176 MCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV----------------------- 231 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----------------------- 231 (284)
..+++.|+|||.+.+ ..++.++|+||||++++++++|..||...........+...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (328)
T cd07856 165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS 244 (328)
T ss_pred CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh
Confidence 567888999998766 56899999999999999999999999776543221111100
Q ss_pred ---CCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCCC
Q 023270 232 ---DLSFP---SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPRG 280 (284)
Q Consensus 232 ---~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (284)
....+ ..+.+++++.+++.+||+.+|++|||+++++.||||++.+.|..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~ 299 (328)
T cd07856 245 LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTD 299 (328)
T ss_pred ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCcc
Confidence 00000 11346789999999999999999999999999999998887754
No 266
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.2e-42 Score=295.16 Aligned_cols=257 Identities=25% Similarity=0.454 Sum_probs=206.1
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----C
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD-----E 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~-----~ 92 (284)
..+|++.+.||.|++|.||++.+..+++.|++|.+.... .......+.+|+.+++.++|+|++++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 368999999999999999999999999999999985322 122345567899999999999999999987544 3
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
..++++|++++ +|...+.. ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 58999999974 78776644 57899999999999999999999999999999999999999999999999987443221
Q ss_pred C------ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------------
Q 023270 173 R------HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL------------ 233 (284)
Q Consensus 173 ~------~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------ 233 (284)
. ....+++.|+|||.+.+ ..++.++||||+|+++++|++|..||...+.......+.....
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 1 22356788999998654 4688999999999999999999999976654333222211000
Q ss_pred ----------CC-C------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 234 ----------SF-P------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 234 ----------~~-~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.. . ..+..++++.+++.+||+.+|++|||+.++++||||.+..++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence 00 0 012467889999999999999999999999999999877543
No 267
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.8e-42 Score=288.03 Aligned_cols=250 Identities=31% Similarity=0.524 Sum_probs=209.2
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeEEEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERIFLIL 98 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~~~v~ 98 (284)
|++.+.||.|++|.||++.+..+++.+++|++.... ........+.+|+.+++.++|+|++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 789999999999999999999999999999997653 2223345677899999999999999999999888 8999999
Q ss_pred eecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----
Q 023270 99 EYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---- 173 (284)
||+++ +|.+++... ..+++..++.++.|++.|+.+||..|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 99974 888888765 578999999999999999999999999999999999999999999999999885443322
Q ss_pred ccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-----C----------
Q 023270 174 HTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP-----S---------- 237 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-----~---------- 237 (284)
....++..|+|||.+.+ ..++.++||||||++++++++|..||...+.......+........ .
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 23345778999998765 4578999999999999999999999988777665555443211000 0
Q ss_pred --------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 238 --------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 238 --------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+++++.+++.+||..+|.+||+++++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 01138889999999999999999999999999997
No 268
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.3e-42 Score=293.44 Aligned_cols=252 Identities=27% Similarity=0.504 Sum_probs=201.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEec--CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--CeEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVE--SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ERIF 95 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~~~ 95 (284)
+|++.+.||+|++|.||+|.+.. ++..||+|.+...........+.+.+|+.+++.++|+|++++++++... +.++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58999999999999999999988 8899999998763311222234567889999999999999999999888 7899
Q ss_pred EEEeecCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC----CCCEEEeecccc
Q 023270 96 LILEYAHRGELYRELRKH-----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH----EGRLKIGDFGWS 166 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~----~~~~~l~d~~~~ 166 (284)
+|+||+++ ++.+.+... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 677666432 26899999999999999999999999999999999999999 899999999987
Q ss_pred cccCCCC------ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHH---------HHHHHHh
Q 023270 167 VQSRSKR------HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKD---------TFRRIMK 230 (284)
Q Consensus 167 ~~~~~~~------~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---------~~~~~~~ 230 (284)
....... ....+++.|+|||.+.+. .++.++|+||||+++++|++|..||....... .+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 5432221 223457789999988764 47899999999999999999999997654322 1111100
Q ss_pred ------------------------c--CCCCCC---------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 231 ------------------------V--DLSFPS---------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 231 ------------------------~--~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
. ....+. ....+.++.+++.+||.+||++|||++++++||||
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 0 000000 01456789999999999999999999999999998
No 269
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=312.15 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=217.9
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceee-EEe
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYG-WFH 89 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~-~~~ 89 (284)
...++.-.+++|.+.|.+|||+.||+|.+...+..||+|++... .+..++.+++|+.+|+.|+ |+|||.+++ ...
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~ 106 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAI 106 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence 45566777899999999999999999999988899999998655 3456789999999999997 999999999 322
Q ss_pred ----cC--CeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeEecCCCCEE
Q 023270 90 ----DD--ERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENH--VIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 90 ----~~--~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~g--i~H~dl~p~nil~~~~~~~~ 159 (284)
.+ -.++++||||.++.|.+++... ..|++.++++|+.++++|+.+||..+ |+|||||.+|||+..+|+.|
T Consensus 107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred cccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEE
Confidence 11 2579999999999999999754 46999999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC------------ccccCCCcccCcccc---CCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHH
Q 023270 160 IGDFGWSVQSRSKR------------HTMCGTLDYLAPEMV---ENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDT 224 (284)
Q Consensus 160 l~d~~~~~~~~~~~------------~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~ 224 (284)
|||||.++...... -...-|+.|+|||.+ .+..+++|+|||+|||+||.|+....||+....-
T Consensus 187 LCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-- 264 (738)
T KOG1989|consen 187 LCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-- 264 (738)
T ss_pred eCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--
Confidence 99999984433222 112358899999965 5778999999999999999999999999876443
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 225 FRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
.++.+.+.++..+..+..+.+||+.||++||.+||++-|++++-+--
T Consensus 265 --aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 265 --AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred --eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 45567788888889999999999999999999999999999875433
No 270
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.4e-42 Score=291.34 Aligned_cols=251 Identities=20% Similarity=0.352 Sum_probs=210.4
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCce----EEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHP----VALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~----v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.+..++|++.+.||+|+||.||++.+..++.. |++|++..... ....+.+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~ 80 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLT 80 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence 45678999999999999999999998666554 89999864322 2234577889999999999999999998876
Q ss_pred CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+ ..+++++++++|+|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 81 S-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred C-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 4 577999999999999999875 46889999999999999999999999999999999999999999999999998644
Q ss_pred CCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 170 RSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 170 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
.... .....+..|+|||.+.+..++.++||||||+++|++++ |..||.+....+... ........+..+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQPPICTI 238 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCCCCCCCCH
Confidence 3221 11223567999999999999999999999999999997 999998877665543 4444445555567889
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
++.+++.+||..+|.+||++.+++.+
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999999999999987
No 271
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.3e-42 Score=282.09 Aligned_cols=248 Identities=23% Similarity=0.426 Sum_probs=213.3
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++...+|.+.+.||.|++|.||++.+. ++..+++|.+...... ...+.+|+..++.++|+|++++++++..+...
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPI 76 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCce
Confidence 567789999999999999999999864 5578999998654332 24677899999999999999999999988999
Q ss_pred EEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++++|++++++|.+++.... .++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999999997653 6899999999999999999999999999999999999999999999999987544321
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. .....+..|+|||.+.+...+.++|+||+|++++++++ |..||...+.......+.... ..+.+...+.++.+
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 235 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-RMPRPPNCPEELYD 235 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHH
Confidence 1 12224567999999998889999999999999999998 999999888887777776542 34444567899999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+||..+|.+||+++++++
T Consensus 236 ~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 236 LMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHcccCcccCCCHHHHHH
Confidence 999999999999999999874
No 272
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=320.95 Aligned_cols=267 Identities=35% Similarity=0.581 Sum_probs=236.1
Q ss_pred hhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEE
Q 023270 9 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
......+.+..||.|++.||.|+||.|.+++++.+++.||.|++.+-.......-..|+.|=.+|..-+.+=|+.++..|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 34556677888999999999999999999999999999999999775444444456778888888888889999999999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
.++.++|+||||++||+|..++.....++++.++-++..|+.||..+|+.|++|+||||+|||++..|++||.|||.+..
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClk 224 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK 224 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHh
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999998754
Q ss_pred cCC----CCccccCCCcccCccccC----C-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCC
Q 023270 169 SRS----KRHTMCGTLDYLAPEMVE----N-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKV--DLSFPS 237 (284)
Q Consensus 169 ~~~----~~~~~~~~~~y~aPE~~~----~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~--~~~~~~ 237 (284)
... .....+|||.|.+||++. + +.|++..|.||+|+++|+|+.|..||-..+-.+++.+++.- .+.+|.
T Consensus 225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~ 304 (1317)
T KOG0612|consen 225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD 304 (1317)
T ss_pred cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc
Confidence 432 235567999999999984 3 56889999999999999999999999999999999999876 445554
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCC---HHhhhcCccccccC
Q 023270 238 APSISAEAKHLISRLLVKDSSKRLS---LQKIMEHPWIIKNA 276 (284)
Q Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~~~~~~~~~ 276 (284)
...+|.+.++||.+.++ +|+.|.. ++++..||||.+-+
T Consensus 305 ~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 305 ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGID 345 (1317)
T ss_pred ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence 46799999999999995 8899998 99999999998753
No 273
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-44 Score=303.37 Aligned_cols=250 Identities=25% Similarity=0.457 Sum_probs=225.9
Q ss_pred HhhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeE
Q 023270 8 REDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGW 87 (284)
Q Consensus 8 ~~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~ 87 (284)
.+....+++-|..-..++.||.|+.|.||+++. .++.||||++.. .-..+|+.|++|+|+||+.|.++
T Consensus 113 ~qq~e~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGV 180 (904)
T KOG4721|consen 113 QQQEELWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGV 180 (904)
T ss_pred hhhhhhccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeee
Confidence 344567888888889999999999999999986 567899999832 12367888999999999999999
Q ss_pred EecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 88 FHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 88 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
|...-.+|||||||..|.|...|+...+++......|..+|+.|+.|||.++|+|+|||.-|||++.+..|||+|||-+.
T Consensus 181 CtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 181 CTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSK 260 (904)
T ss_pred ecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999773
Q ss_pred ccC--CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 168 QSR--SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 168 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
... ...-...||..|+|||++.+.+.++|.||||||++||+|+||..||.+-+...++.-.-...+..+.+..+|+.+
T Consensus 261 e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~Gf 340 (904)
T KOG4721|consen 261 ELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGF 340 (904)
T ss_pred hhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHH
Confidence 322 333345799999999999999999999999999999999999999999988888887777778888888999999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+-|+++||...|++|||+.|||.|
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHH
Confidence 999999999999999999999999
No 274
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.4e-42 Score=293.82 Aligned_cols=259 Identities=24% Similarity=0.427 Sum_probs=211.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD----- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~----- 91 (284)
...+|.+.+.||+|+||.||++.+..+++.|++|++....... ...+.+.+|+.++++++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh-HHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 4488999999999999999999999999999999986533222 2245677899999999999999999987543
Q ss_pred -CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 92 -ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
...+++++++ +++|.+++.. ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 3478888887 5688887755 468999999999999999999999999999999999999999999999999986655
Q ss_pred CCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----------------
Q 023270 171 SKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL---------------- 233 (284)
Q Consensus 171 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---------------- 233 (284)
.......++..|+|||.+.+ ..++.++|+||||++++++++|..||...+.......+.....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (345)
T cd07877 172 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 251 (345)
T ss_pred ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHH
Confidence 54445567889999998866 4588899999999999999999999987665544433322110
Q ss_pred -------CCCC------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 234 -------SFPS------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 234 -------~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
..+. ....++++.++|.+||..||.+||++.++++||||++.-.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 252 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred HHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence 0000 11357889999999999999999999999999999975443
No 275
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-41 Score=281.09 Aligned_cols=241 Identities=24% Similarity=0.379 Sum_probs=204.1
Q ss_pred eeeccCCCeEEEEEEE--ecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKGKFGRVYLVRE--VESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~--~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
+.||+|+||.||++.+ ..++..+++|++...... ....+.+..|+.+++.++|+|++++++++. ++..++|+||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-PALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred CcCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-HHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence 3689999999999864 456788999998654322 234567888999999999999999999875 556799999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC------ccc
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR------HTM 176 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~------~~~ 176 (284)
+++|.+++.....++...+..++.|++.|+.+||+.|++|+||+|.||+++.++.++|+|||.+....... ...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence 99999999888889999999999999999999999999999999999999999999999999875443221 112
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.++..|+|||.+.+..++.++|+||||++++++++ |..||......+....+..+. ..+.+..+++++.++|.+||+.
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~~~~ 237 (257)
T cd05116 159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE-RMECPQRCPPEMYDLMKLCWTY 237 (257)
T ss_pred CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHhcc
Confidence 23468999999988889999999999999999998 999999888777777666543 3445557899999999999999
Q ss_pred CCCCCCCHHhhhc
Q 023270 256 DSSKRLSLQKIME 268 (284)
Q Consensus 256 ~p~~Rps~~~il~ 268 (284)
||.+||++++|.+
T Consensus 238 ~p~~Rp~~~~i~~ 250 (257)
T cd05116 238 GVDERPGFAVVEL 250 (257)
T ss_pred CchhCcCHHHHHH
Confidence 9999999999865
No 276
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.3e-41 Score=280.57 Aligned_cols=242 Identities=25% Similarity=0.451 Sum_probs=208.0
Q ss_pred eeeccCCCeEEEEEEEec-CCc--eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeec
Q 023270 25 RPLGKGKFGRVYLVREVE-SKH--PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~-~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 101 (284)
+.||.|++|.||++.+.. +++ .|++|.+...... ...+.+.+|+..+++++|+|++++++++.. ...++++|++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999998865 333 5899998765543 456788899999999999999999999988 8899999999
Q ss_pred CCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC------C
Q 023270 102 HRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------R 173 (284)
Q Consensus 102 ~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------~ 173 (284)
++++|.+++.+.. .+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++...... .
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 9999999998764 6899999999999999999999999999999999999999999999999987543321 1
Q ss_pred ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 023270 174 HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRL 252 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 252 (284)
....++..|+|||.+.+..++.++|+||||+++++|++ |..||...+..+..............+...|..+.+++.+|
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 237 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC 237 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence 12345678999999998889999999999999999998 99999888888777776654445555557889999999999
Q ss_pred cccCCCCCCCHHhhhcC
Q 023270 253 LVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 253 l~~~p~~Rps~~~il~~ 269 (284)
|..+|++|||++++++.
T Consensus 238 l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 238 WAHNPADRPTFAALREF 254 (257)
T ss_pred CCCCcccCCCHHHHHHH
Confidence 99999999999999863
No 277
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8.5e-42 Score=285.35 Aligned_cols=249 Identities=24% Similarity=0.444 Sum_probs=210.9
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+...+|++.+.||+|+||.||++... .++..+++|.+..... .....+.+|++.++.++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH---HHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 56788999999999999999999642 3566788998754332 234578889999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC
Q 023270 91 DERIFLILEYAHRGELYRELRKHR---------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE 155 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~---------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~ 155 (284)
++..++++||+++++|.+++...+ .++...++.++.|++.|+.|||+.|++|+||+|+||+++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 999999999999999999997653 47889999999999999999999999999999999999999
Q ss_pred CCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 023270 156 GRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIM 229 (284)
Q Consensus 156 ~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~ 229 (284)
+.++|+|||++...... .....+++.|+|||.+.+..++.++||||||+++++|++ |..||...+..+......
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 99999999987533221 112234678999999998889999999999999999998 999998887777776665
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 230 KVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+. ....+..+++.+.+++.+||..||.+||+++++++
T Consensus 239 ~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 239 QGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 543 23344578999999999999999999999999975
No 278
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.2e-41 Score=287.34 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=212.6
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceee
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYG 86 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~ 86 (284)
.+++..++|.+.+.||.|+||.||++.+. .++..+++|.+...... ...+.+.+|+.+++++ +|+||+++++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~ 106 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS--SEREALMSELKIMSHLGNHENIVNLLG 106 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh--HHHHHHHHHHHHHHhccCCCCcceEEE
Confidence 45566678999999999999999999753 34557999988654322 2346788999999999 7999999999
Q ss_pred EEecCCeEEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecc
Q 023270 87 WFHDDERIFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG 164 (284)
Q Consensus 87 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~ 164 (284)
++...+..++++||+++++|.+++.... .++..++..++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||
T Consensus 107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 107 ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999999997643 38999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCC
Q 023270 165 WSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSA 238 (284)
Q Consensus 165 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
.+....... ....++..|+|||.+.+..++.++||||+|++++++++ |..||......+...+...........
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 266 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP 266 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCC
Confidence 875432211 12234677999999998889999999999999999998 999998877666555555444444444
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 239 PSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
...++++.+++.+||.++|.+|||+.++++
T Consensus 267 ~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 267 EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 567899999999999999999999999985
No 279
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.9e-42 Score=294.67 Aligned_cols=255 Identities=25% Similarity=0.459 Sum_probs=208.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC------C
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD------E 92 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~------~ 92 (284)
.+|.+.+.||.|++|.||+|.+..+++.|++|++....... .....+.+|+++++.++|+||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-cchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 58999999999999999999999999999999986532222 2235677899999999999999999988654 3
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.+++|+||+.. +|...+ ...++...+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 94 ~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 56999999864 676654 246899999999999999999999999999999999999999999999999998655444
Q ss_pred CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------------------
Q 023270 173 RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL------------------ 233 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------------ 233 (284)
.....+++.|+|||.+.+ ..++.++|+||||+++++|++|+.||...+.......+.....
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (342)
T cd07879 171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY 250 (342)
T ss_pred CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHH
Confidence 444566788999999876 4588999999999999999999999988765554443332100
Q ss_pred -----CCCC------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 234 -----SFPS------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 234 -----~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
..+. .+..++++.++|++||+.||.+||++++++.||||+...+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 251 IKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000 1246788999999999999999999999999999998754
No 280
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.4e-42 Score=290.57 Aligned_cols=243 Identities=28% Similarity=0.525 Sum_probs=188.4
Q ss_pred eeeeccCCCeEEEEEEEec--CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe--cCCeEEEEEe
Q 023270 24 GRPLGKGKFGRVYLVREVE--SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH--DDERIFLILE 99 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~--~~~~~~~v~e 99 (284)
..+||.|+||+||+|.+.. ++..|++|.+...... ..+.+|+.+++.++|+|++++++++. .+...++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS-----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc-----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 3689999999999998654 5678999988543322 34668999999999999999999885 3567899999
Q ss_pred ecCCCchHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEe----cCCCCEEEeecccc
Q 023270 100 YAHRGELYRELRKH---------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL----DHEGRLKIGDFGWS 166 (284)
Q Consensus 100 ~~~~~~L~~~l~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~----~~~~~~~l~d~~~~ 166 (284)
|+++ +|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||++
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 9974 777777532 247889999999999999999999999999999999999 45679999999998
Q ss_pred cccCCC------CccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChH---------HHHHHHHh
Q 023270 167 VQSRSK------RHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQK---------DTFRRIMK 230 (284)
Q Consensus 167 ~~~~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------~~~~~~~~ 230 (284)
...... .....+++.|+|||.+.+. .++.++||||||+++++|+||.+||...... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 543322 1234568889999998764 4789999999999999999999999653321 11111110
Q ss_pred cCC--------------------------C----------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 231 VDL--------------------------S----------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 231 ~~~--------------------------~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
... . .......+..+.+|+.+||..||.+|||++|+|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000 0 00011235678899999999999999999999999998
No 281
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.4e-42 Score=282.00 Aligned_cols=247 Identities=22% Similarity=0.402 Sum_probs=209.5
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++...+|+++++||+|+||.||+|.. .+++.|++|.+....... ..+.+|+.+++.++|+|++++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSP----EAFLAEANLMKQLQHPRLVRLYAVVT-QEPI 75 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcH----HHHHHHHHHHHhcCCcCeeeEEEEEc-cCCc
Confidence 45667899999999999999999985 467889999986544332 46778999999999999999999874 5678
Q ss_pred EEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
++++|++.+++|.+++... ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999999999998764 36889999999999999999999999999999999999999999999999987543311
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. ....++..|+|||.+....++.++|+||||++++++++ |..||...+..+....+... ...+.+...+.++.+
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRMPRPDNCPEELYE 234 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCCCCCCCCCHHHHH
Confidence 1 12234568999999988889999999999999999998 99999988877776665544 344555678899999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+||..+|++||+++++++
T Consensus 235 li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 235 LMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHccCChhhCCCHHHHHH
Confidence 999999999999999999875
No 282
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-41 Score=286.86 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=210.1
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCC----------------ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCC
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESK----------------HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHP 79 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~----------------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ 79 (284)
+..++|++++.||+|+||.||++.+...+ ..|++|.+...... .....+.+|+++++.++|+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDP 79 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCC
Confidence 35679999999999999999999876543 45799998654322 3356788999999999999
Q ss_pred cccceeeEEecCCeEEEEEeecCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 80 NILRLYGWFHDDERIFLILEYAHRGELYRELRKHR-----------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 80 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
|++++++++..++..++++|++++++|.+++.... .++...++.++.|++.||.|||+.|++|+||+|+
T Consensus 80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~ 159 (296)
T cd05051 80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR 159 (296)
T ss_pred CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 99999999999999999999999999999997765 6899999999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh--CCCCCCCCCh
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY--GAPPFEAESQ 221 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t--g~~p~~~~~~ 221 (284)
||+++.++.++|+|||++...... .....+++.|+|||.+.+..++.++||||||++++++++ +..||...+.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 999999999999999987543221 122335678999999988889999999999999999998 7888988777
Q ss_pred HHHHHHHHhc------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 222 KDTFRRIMKV------DLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 222 ~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
...+...... ....+..+.++.++.+++.+||+.+|.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 7666655432 1122233457899999999999999999999999965
No 283
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.5e-42 Score=293.88 Aligned_cols=256 Identities=26% Similarity=0.438 Sum_probs=206.7
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC------
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD------ 91 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~------ 91 (284)
..+|.+.+.||.|++|.||++.+..+++.|++|.+..... ...+.+.+|+++++.++|+|++++++.+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 3789999999999999999999999999999999855433 2345677899999999999999999876543
Q ss_pred --------CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEee
Q 023270 92 --------ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGD 162 (284)
Q Consensus 92 --------~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d 162 (284)
...++|+||++ ++|.+++.. ..+++..++.++.|+++||.|||+.|++|+||+|+||+++. ++.++|+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence 35799999997 588887754 46899999999999999999999999999999999999975 56789999
Q ss_pred cccccccCCC------CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-
Q 023270 163 FGWSVQSRSK------RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS- 234 (284)
Q Consensus 163 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~- 234 (284)
||.+...... .....++..|.|||.+.. ..++.++||||||+++++|++|..||...+..+...........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9987543211 122346778999998754 45788999999999999999999999877665554444332100
Q ss_pred ---------------------CC------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 235 ---------------------FP------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 235 ---------------------~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.. ..+.++.++.+|+.+||..||++|||+++++.||||+.-..|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCC
Confidence 00 012477889999999999999999999999999999854333
No 284
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.3e-42 Score=290.04 Aligned_cols=257 Identities=28% Similarity=0.493 Sum_probs=209.6
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE- 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~- 92 (284)
.+...++|++.+.||.|++|.||++.+..+++.|++|.+....... .....+.+|+++++.++|+|++++++++.+..
T Consensus 2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~ 80 (302)
T cd07864 2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQD 80 (302)
T ss_pred chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcch
Confidence 3456789999999999999999999999999999999986432211 12345678999999999999999999887654
Q ss_pred ---------eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEee
Q 023270 93 ---------RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGD 162 (284)
Q Consensus 93 ---------~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d 162 (284)
.+++|+||+++ ++...+.+. ..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence 79999999986 677767654 4689999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC----ccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--
Q 023270 163 FGWSVQSRSKR----HTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF-- 235 (284)
Q Consensus 163 ~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-- 235 (284)
||.+....... ....++..|+|||.+.+. .++.++||||||++++++++|.+||...+..+.+..+.......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 99875432211 122346789999988654 47889999999999999999999998777665555444321100
Q ss_pred --------------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 --------------------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 --------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
.....+|+.+.+++.+||..+|.+|||++++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 0112468999999999999999999999999999997
No 285
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-41 Score=285.98 Aligned_cols=255 Identities=39% Similarity=0.673 Sum_probs=211.9
Q ss_pred CcEeeeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHH-HHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIE-KYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~-~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~ 94 (284)
+|++.+.||.|+||.||+|.+. .++..|++|++...... .....+.+.+|++++..+ +|++|+++++.+..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 5899999999999999999875 47889999998654332 223346677899999999 589999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
++|+||+++++|.+++.....++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV 160 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence 999999999999999988888999999999999999999999999999999999999999999999999987543221
Q ss_pred --CccccCCCcccCccccCCC--CCCchhhHhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcCCCCCCCCCCCHH
Q 023270 173 --RHTMCGTLDYLAPEMVENK--EHDYAVDNWTLGILCYEFLYGAPPFEAESQ----KDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
.....++..|+|||.+.+. ..+.++|+||||++++++++|..||..... .+......... .+.+..+++.
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 238 (290)
T cd05613 161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE--PPYPQEMSAL 238 (290)
T ss_pred cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC--CCCCccCCHH
Confidence 1234478889999998753 467899999999999999999999974332 33333333322 2334468899
Q ss_pred HHHHHHHhcccCCCCCC-----CHHhhhcCccccccC
Q 023270 245 AKHLISRLLVKDSSKRL-----SLQKIMEHPWIIKNA 276 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rp-----s~~~il~~~~~~~~~ 276 (284)
+.+++++||..+|.+|| ++++++.||||++..
T Consensus 239 ~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 239 AKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 99999999999999997 899999999998863
No 286
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.5e-42 Score=287.10 Aligned_cols=250 Identities=30% Similarity=0.533 Sum_probs=209.1
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++.+.||+|++|.||++.+..+++.+++|.+....... .....+..|+..++.++|+|++++++++..++..++++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 678899999999999999998899999999986544332 2345777899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---ccc
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HTM 176 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~~ 176 (284)
+++ ++.+.+... ..++...+..++.+++.+|.+||+.|++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 975 787777663 578999999999999999999999999999999999999999999999999875443322 223
Q ss_pred cCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--------------------
Q 023270 177 CGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF-------------------- 235 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-------------------- 235 (284)
.++..|.|||.+.+. ..+.++|+||||++++++++|..||...+..+............
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 467789999998776 68999999999999999999999998877655444433211000
Q ss_pred --------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 --------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+.++.++.+++.+||.+||.+||++++++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0112467899999999999999999999999999997
No 287
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7e-42 Score=286.19 Aligned_cols=252 Identities=20% Similarity=0.371 Sum_probs=212.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecC-----CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVES-----KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
++.+.+|++.+.||.|+||.||++.+..+ +..|++|++...... .....+..|+.++..++|+||+++++++.
T Consensus 1 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 78 (283)
T cd05091 1 EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG--PLREEFKHEAMMRSRLQHPNIVCLLGVVT 78 (283)
T ss_pred CCCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 35678899999999999999999987543 577999998654322 23456788999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEec
Q 023270 90 DDERIFLILEYAHRGELYRELRKH----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLD 153 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~ 153 (284)
..+..++++||+.+++|..++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 999999999999999999998532 2478888999999999999999999999999999999999
Q ss_pred CCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 023270 154 HEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRR 227 (284)
Q Consensus 154 ~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~ 227 (284)
.++.++|+|||++....... ....+++.|+|||.+.+..++.++||||||+++++|++ |..||......+....
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999875432211 22334678999999988889999999999999999998 8899988888877777
Q ss_pred HHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 228 IMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+..... .+.+..++..+.+++.+||+.+|.+||++.+|+..
T Consensus 239 i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 239 IRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 666543 33445789999999999999999999999999864
No 288
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-41 Score=281.26 Aligned_cols=247 Identities=22% Similarity=0.405 Sum_probs=208.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++...+|++.++||.|++|.||++.+. ++..+++|.+....... +.+.+|+.+++.++|++++++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~----~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSP----ESFLEEAQIMKKLRHDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCH----HHHHHHHHHHHhcCCCceEEEEeEEC-CCCc
Confidence 456678999999999999999999764 56679999986544322 45788999999999999999999875 4568
Q ss_pred EEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
+++|||+++++|.+++... ..++...++.++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 9999999999999998764 35899999999999999999999999999999999999999999999999998543221
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. ....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+....+... ...+.+...+.++.+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPCPQDCPISLHE 234 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHH
Confidence 1 12234567999999988889999999999999999999 99999888887777766553 334445578899999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+||..+|.+|||++++++
T Consensus 235 li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 235 LMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHcccCcccCcCHHHHHH
Confidence 999999999999999999874
No 289
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.9e-41 Score=279.70 Aligned_cols=240 Identities=24% Similarity=0.387 Sum_probs=203.8
Q ss_pred eeeccCCCeEEEEEEEecCC---ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeec
Q 023270 25 RPLGKGKFGRVYLVREVESK---HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 101 (284)
++||+|+||.||+|.+...+ ..+++|.+...... ...+.+.+|++.++.++|+|++++++++. .+..++|+||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 47999999999999876655 68999998765443 23467888999999999999999999875 55689999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcc------
Q 023270 102 HRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT------ 175 (284)
Q Consensus 102 ~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~------ 175 (284)
++++|.+++.....+++..+..++.|++.++.+||..|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 99999999998888999999999999999999999999999999999999999999999999987543222211
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcc
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 254 (284)
..++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+....+.... ....+..++..+.+++.+||.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~ 236 (257)
T cd05060 158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-RLPRPEECPQEIYSIMLSCWK 236 (257)
T ss_pred ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCCCCCCCCHHHHHHHHHHhc
Confidence 112357999999998889999999999999999998 999998888776666655443 334555788999999999999
Q ss_pred cCCCCCCCHHhhhc
Q 023270 255 KDSSKRLSLQKIME 268 (284)
Q Consensus 255 ~~p~~Rps~~~il~ 268 (284)
++|++||++.++++
T Consensus 237 ~~p~~Rp~~~~l~~ 250 (257)
T cd05060 237 YRPEDRPTFSELES 250 (257)
T ss_pred CChhhCcCHHHHHH
Confidence 99999999999875
No 290
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-41 Score=286.13 Aligned_cols=261 Identities=27% Similarity=0.482 Sum_probs=210.9
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEec
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHD 90 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~ 90 (284)
....+...+|++.+.||.|++|.||++.+..+++.|++|.+....... ....+..++..+... .|+|++++++++..
T Consensus 8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH--HHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 445778899999999999999999999998889999999986543222 223445566655555 49999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 91 DERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+...++++||++ +++.+++.. ...+++..+..++.+++.++.|||+ .|++|+||+|+||+++.++.++|+|||++..
T Consensus 86 ~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 86 DSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred CCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 999999999986 477777655 3578999999999999999999997 5999999999999999999999999998754
Q ss_pred cCC--CCccccCCCcccCccccCCCC----CCchhhHhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcCC-CCCCCCC
Q 023270 169 SRS--KRHTMCGTLDYLAPEMVENKE----HDYAVDNWTLGILCYEFLYGAPPFEAESQ-KDTFRRIMKVDL-SFPSAPS 240 (284)
Q Consensus 169 ~~~--~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~ 240 (284)
... ......++..|+|||.+.+.. ++.++|+||||+++++|++|..||..... .+.+........ ..+....
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06618 165 LVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEG 244 (296)
T ss_pred ccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCC
Confidence 322 122334677899999986553 78899999999999999999999976433 344444444332 2222234
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
++.++.+++.+||..||.+||++++++.||||++.
T Consensus 245 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 245 FSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 78999999999999999999999999999999875
No 291
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-42 Score=308.82 Aligned_cols=259 Identities=22% Similarity=0.346 Sum_probs=195.3
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCce-EEEE--------------ehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHP-VALK--------------IIFKEQIEKYKIQHQLRREMEIQSSLRHPNI 81 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-v~iK--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i 81 (284)
...+|++++.||+|+||+||++........ .+.| .+.+...........+.+|+.++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 457899999999999999999876433221 1111 1111111122334567899999999999999
Q ss_pred cceeeEEecCCeEEEEEeecCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC
Q 023270 82 LRLYGWFHDDERIFLILEYAHRGELYRELRKH-----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG 156 (284)
Q Consensus 82 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~ 156 (284)
+++++++..++..|++++++. ++|.+++... .......++.++.|++.||.|||+.||+|+||||+|||++.++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 999999999999999999986 4777666442 2234667888999999999999999999999999999999999
Q ss_pred CEEEeecccccccCCC----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCC-CCCC--ChHHHHHHHH
Q 023270 157 RLKIGDFGWSVQSRSK----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPP-FEAE--SQKDTFRRIM 229 (284)
Q Consensus 157 ~~~l~d~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p-~~~~--~~~~~~~~~~ 229 (284)
.++|+|||++...... .....|+..|+|||++.+..++.++||||||+++++|++|..+ +... .....+.++.
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 9999999998544322 1234689999999999999999999999999999999998754 4322 2222222222
Q ss_pred hcCC----CCC--------------------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 230 KVDL----SFP--------------------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 230 ~~~~----~~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.... .++ ....++.++.+++.+||..||.+|||+.++|+||||....
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE 461 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence 1100 000 0113566788899999999999999999999999998764
No 292
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-41 Score=283.21 Aligned_cols=250 Identities=24% Similarity=0.437 Sum_probs=214.7
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
..+|++.+.||.|+||.||++.... +.+.+++|.+..... ....+.+.+|+++++.++|+|++++++++.+.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 4689999999999999999999754 346689998855332 223467888999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeec
Q 023270 93 RIFLILEYAHRGELYRELRKHR---------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDF 163 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~---------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~ 163 (284)
..++|+||+++++|.+++.... .++...+..++.|++.+|.|||+.|++|+||+|+||+++.++.++++||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999999998765 6899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCC----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCC
Q 023270 164 GWSVQSRSK----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSA 238 (284)
Q Consensus 164 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
|++...... .....++..|+|||.+.+...+.++||||||++++++++ |..||..................+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 241 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVP 241 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCC
Confidence 987433221 122334667999999988888999999999999999998 889998877777777776666666666
Q ss_pred CCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 239 PSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
..++..+.+++.+||..+|.+|||+.+++..
T Consensus 242 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 242 EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 6789999999999999999999999999864
No 293
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-41 Score=287.29 Aligned_cols=254 Identities=24% Similarity=0.444 Sum_probs=211.4
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecC-------CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccce
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVES-------KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRL 84 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~ 84 (284)
.+++...+|.+.+.||+|+||.||++.+... ...+++|.+...... .....+..|+.++..+ +|+|++++
T Consensus 12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~ 89 (307)
T cd05098 12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINL 89 (307)
T ss_pred cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh--HHHHHHHHHHHHHHHhcCCCCEeeE
Confidence 4555568999999999999999999986542 346999998654221 2235677899999999 79999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
++++..++..++|+||+++++|.+++.... .++...++.++.|++.||.|||+.|++|+||+|+
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 169 (307)
T cd05098 90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 169 (307)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence 999999999999999999999999997642 4788999999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChH
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQK 222 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 222 (284)
||+++.++.++|+|||.+...... .....+++.|+|||.+.+..++.++|+||||+++++|++ |..||...+..
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 999999999999999987543221 111223467999999988889999999999999999998 89999887776
Q ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 223 DTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+......... ....+..++.++.+++.+||..+|.+|||+.+++++
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 250 ELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 6666555443 334455789999999999999999999999999875
No 294
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.6e-41 Score=279.36 Aligned_cols=247 Identities=22% Similarity=0.389 Sum_probs=207.5
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
++...+|.+...||.|++|.||++.+..+ ..+++|.+...... .+.+.+|+++++.++|++++++++++. .+..
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 75 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMM----PEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPI 75 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCcc----HHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCc
Confidence 34567899999999999999999987554 46999987553322 245778999999999999999999875 4568
Q ss_pred EEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
+++|||+++++|.+++.... .++...+..++.+++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 99999999999999997643 4789999999999999999999999999999999999999999999999988543222
Q ss_pred C----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 R----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
. ....++..|+|||...+...+.++|+||||++++++++ |..||......+....+... ...+.+...+..+.+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 234 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRMPCPQGCPESLHE 234 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcccCHHHHH
Confidence 1 12234567999999988889999999999999999999 99999988887777666554 333444578899999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
++++||..+|.+||+++++++
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999875
No 295
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.2e-41 Score=280.89 Aligned_cols=249 Identities=26% Similarity=0.419 Sum_probs=210.7
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCc---eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKH---PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
...+|++.+.||.|+||.||++.+..++. .+++|.+...... ...+.+.+|+..++.++|+|++++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 46789999999999999999998865443 6899988653322 234678889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 94 IFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.++|+||+++++|.+++... +.++...+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999999765 46899999999999999999999999999999999999999999999999987543322
Q ss_pred Cc------cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 173 RH------TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 173 ~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
.. ...++..|+|||.+.+..++.++|+||||++++++++ |..||......+....+... ...+....+++.+
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLPAPMDCPAAL 238 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCCCCCCCCHHH
Confidence 11 1112457999999998889999999999999999886 99999888777666666554 3444555789999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhc
Q 023270 246 KHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+++.+|++.+|.+||+++++++
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 239 HQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHHHHHHcccCchhCCCHHHHHH
Confidence 99999999999999999999975
No 296
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.1e-41 Score=286.32 Aligned_cols=254 Identities=24% Similarity=0.455 Sum_probs=213.3
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCC-----ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceee
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESK-----HPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYG 86 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~ 86 (284)
..++..++|++.+.||+|++|.||++...... ..+++|.+...... .....+.+|+.++..+ +|+|++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH--HHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 34566788999999999999999999876443 67899998653322 2335678899999999 7999999999
Q ss_pred EEecCCeEEEEEeecCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 023270 87 WFHDDERIFLILEYAHRGELYRELRKH----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENL 150 (284)
Q Consensus 87 ~~~~~~~~~~v~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ni 150 (284)
++..++..+++|||+++++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||
T Consensus 84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni 163 (293)
T cd05053 84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV 163 (293)
T ss_pred EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence 999999999999999999999998642 4588999999999999999999999999999999999
Q ss_pred EecCCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHH
Q 023270 151 LLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDT 224 (284)
Q Consensus 151 l~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~ 224 (284)
+++.++.++|+|||++....... ....++..|+|||.+.+..++.++||||||++++++++ |..||......+.
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 243 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence 99999999999999875433211 11224567999999988889999999999999999997 9999988877776
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 225 FRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
....... .....+...+.++.+|+.+||..+|.+|||+.+++++
T Consensus 244 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 244 FKLLKEG-YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 6665554 3344455788999999999999999999999999875
No 297
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.9e-42 Score=285.82 Aligned_cols=250 Identities=31% Similarity=0.570 Sum_probs=209.9
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|++.+.||.|++|.||+++...+++.|++|++.... ......+.+..|+..++.++|+|++++++++.+.+..++|+|+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999987654 1222345667899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---ccc
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HTM 176 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~~ 176 (284)
++ ++|.+++.+. ..++...+..++.+++.+|.+||+.|++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 97 5899999887 579999999999999999999999999999999999999999999999999875443222 223
Q ss_pred cCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC------------------CC--
Q 023270 177 CGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL------------------SF-- 235 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------------~~-- 235 (284)
..+..|+|||.+.+. .++.++|+||||++++++++|..||...+..+.+.++..... ..
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 346779999998776 789999999999999999999999988776655544432100 00
Q ss_pred -------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 236 -------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 236 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
...+.++.++.+++++||..+|++||++++++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0112357889999999999999999999999999998
No 298
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.5e-41 Score=279.79 Aligned_cols=250 Identities=23% Similarity=0.382 Sum_probs=212.5
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCc---eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKH---PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
+..++|+..+.||+|++|.||+|.+..++. .+++|.+...... ...+.+..|+++++.++|+|++++.+++...+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE--KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK 79 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence 556789999999999999999999876655 6899988543222 23456788999999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 93 RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
..++||||+++++|.+++... +.++...+..++.+++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999998764 5789999999999999999999999999999999999999999999999998754332
Q ss_pred CCc------cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHH
Q 023270 172 KRH------TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 172 ~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
... ....+..|+|||.+.+..++.++|+||||++++++++ |..||...+..+....+... ...+.....+.+
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~ 238 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMDCPSA 238 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCCCCHH
Confidence 111 1112456999999988889999999999999999997 99999888887777777654 344445578999
Q ss_pred HHHHHHHhcccCCCCCCCHHhhhc
Q 023270 245 AKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+.+++.+||..+|.+||+++++++
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHH
Confidence 999999999999999999999985
No 299
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.8e-41 Score=285.47 Aligned_cols=251 Identities=23% Similarity=0.375 Sum_probs=205.3
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecC--------------CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVES--------------KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI 81 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~--------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i 81 (284)
+.-++|++.+.||+|+||.||++.+... ...|++|.+..... ......+.+|+++++.++|+|+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~i 79 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT--KTARNDFLKEIKIMSRLKNPNI 79 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCc
Confidence 4457999999999999999999887543 23489999865322 2234578899999999999999
Q ss_pred cceeeEEecCCeEEEEEeecCCCchHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 023270 82 LRLYGWFHDDERIFLILEYAHRGELYRELRKHR------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPEN 149 (284)
Q Consensus 82 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~n 149 (284)
+++++++..++..++||||+++++|.+++.... .++...++.++.|++.|+.|||+.|++|+||+|+|
T Consensus 80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N 159 (295)
T cd05097 80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN 159 (295)
T ss_pred CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence 999999999999999999999999999986532 36788899999999999999999999999999999
Q ss_pred eEecCCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh--CCCCCCCCChH
Q 023270 150 LLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY--GAPPFEAESQK 222 (284)
Q Consensus 150 il~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t--g~~p~~~~~~~ 222 (284)
|+++.++.++|+|||++....... ....++..|+|||.+.+..++.++|+||||+++++|++ +..||...+..
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 999999999999999875432111 12234568999999988889999999999999999988 67888887776
Q ss_pred HHHHHHHh------cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 223 DTFRRIMK------VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 223 ~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+....... .......++..++.+.+|+.+||..+|.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 65554332 11112234467899999999999999999999999975
No 300
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-41 Score=284.27 Aligned_cols=250 Identities=28% Similarity=0.481 Sum_probs=204.7
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC---CCCcccceeeEEecCCe----
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL---RHPNILRLYGWFHDDER---- 93 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l---~h~~i~~~~~~~~~~~~---- 93 (284)
|++.+.||.|++|.||++.+..+++.|++|++....... .....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 789999999999999999998889999999986433222 1223444566555544 69999999999987776
Q ss_pred -EEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 94 -IFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 94 -~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.++++|++++ +|.+++.... .+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999974 8888887753 58999999999999999999999999999999999999999999999999874432
Q ss_pred CC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC-----C-------
Q 023270 171 SK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF-----P------- 236 (284)
Q Consensus 171 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-----~------- 236 (284)
.. .....++..|+|||.+.+..++.++|+||||+++++|++|.+||...+..+...++....... +
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 22 223346788999999998889999999999999999999999999888777666655421100 0
Q ss_pred -------------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 237 -------------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 237 -------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
..+.+++.+.+++.+||+.||.+||++++++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 011346788999999999999999999999999998
No 301
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=8.1e-42 Score=291.74 Aligned_cols=253 Identities=22% Similarity=0.368 Sum_probs=204.9
Q ss_pred eeeccC--CCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKG--KFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g--~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
..||.| ++|+||++.+..+++.|++|++....... ...+.+.+|+.+++.++|+||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 456666 99999999999999999999986543322 334688889999999999999999999999999999999999
Q ss_pred CCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC---C-----
Q 023270 103 RGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS---K----- 172 (284)
Q Consensus 103 ~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~---~----- 172 (284)
++++.+++.+. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++++||+....... .
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 99999998875 3589999999999999999999999999999999999999999999999975421111 0
Q ss_pred --CccccCCCcccCccccCCC--CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC---------------
Q 023270 173 --RHTMCGTLDYLAPEMVENK--EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL--------------- 233 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~--------------- 233 (284)
.....++..|+|||++.+. .++.++|+||+|++++++++|..||.................
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR 242 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence 0111235569999998764 478999999999999999999999987765554443332211
Q ss_pred ------------------------------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 234 ------------------------------SFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 234 ------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
..+....+++++.+|+++||..||.+|||++++|+||||.+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 011112356789999999999999999999999999999987543
No 302
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.4e-41 Score=280.04 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=211.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCc---eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKH---PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
..++|++.+.||.|+||.||+|....+++ .|++|.+.... .......+..|+..++.++|+|++++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 79 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP 79 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc
Confidence 46789999999999999999999887665 59999986532 12234678899999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 94 IFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.++|+||+++++|.+++... +.++...++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999998764 56899999999999999999999999999999999999999999999999987433221
Q ss_pred Cc--c---cc---CCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 173 RH--T---MC---GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 173 ~~--~---~~---~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
.. . .. .+..|+|||.+.+..++.++||||||++++++++ |..||...+..+....+... ...+.+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~ 238 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPPPMDCPT 238 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcCCCcccCCH
Confidence 11 0 11 1346999999998889999999999999999886 99999888877776666443 34455567899
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.+.+++.+||..+|.+||++++++..
T Consensus 239 ~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 239 ALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999999863
No 303
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.7e-42 Score=292.62 Aligned_cols=259 Identities=32% Similarity=0.514 Sum_probs=210.2
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC--Ce
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD--ER 93 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~--~~ 93 (284)
..++|++.+.||.|++|.||++.+..+++.+++|++....... .....+.+|+.+++++ +|+||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4578999999999999999999998899999999885432222 2234566799999999 999999999988654 36
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
.++|+||++ ++|..++... .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 899999997 5898888775 7889999999999999999999999999999999999999999999999987433221
Q ss_pred -------CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------
Q 023270 173 -------RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--------- 235 (284)
Q Consensus 173 -------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------- 235 (284)
.....++..|+|||.+.+ ...+.++|+||||+++++|++|..||......+....+.......
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 122356788999998755 457889999999999999999999998766655444332221100
Q ss_pred --------------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 236 --------------------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 236 --------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
...+.++.++.+++..||..+|.+|||+.++++||||++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 0112368899999999999999999999999999999887443
No 304
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.7e-41 Score=278.30 Aligned_cols=244 Identities=23% Similarity=0.417 Sum_probs=208.1
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
.+++|++.+.||+|+||.||++. .+++.|++|.+.... ....+.+|+..++.++|+|++++++++..+ ..++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 46789999999999999999886 477889999985432 124677899999999999999999988655 4799
Q ss_pred EEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc
Q 023270 97 ILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH 174 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 174 (284)
++||+++++|.+++.... .++...++.++.|++.|+.+||+.|++||||+|+||+++.++.++|+|||++........
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~ 155 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD 155 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence 999999999999997653 578999999999999999999999999999999999999999999999998755433333
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
....+..|.|||.+.+..++.++|+||||+++++|++ |..||...+..+........ ........++..+.+++.+||
T Consensus 156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CCCCCCCcCCHHHHHHHHHHc
Confidence 3344677999999988889999999999999999997 99999988887776666554 333445578999999999999
Q ss_pred ccCCCCCCCHHhhhcC
Q 023270 254 VKDSSKRLSLQKIMEH 269 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~ 269 (284)
..+|.+||+++++++.
T Consensus 235 ~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 235 ETEPKKRPSFHKLREK 250 (254)
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999863
No 305
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.5e-41 Score=280.73 Aligned_cols=251 Identities=29% Similarity=0.483 Sum_probs=208.9
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH--HHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE--KYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+|.+.+.||.|++|.||++.+...+..+++|++...... .......+..|+.+++.++|+|++++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 689999999999999999998877777777765432221 111223456788899999999999999999999999999
Q ss_pred EeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-
Q 023270 98 LEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK- 172 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~- 172 (284)
+||+++++|.+++.. ...+++..++.++.|++.|+.+||+.|++|+||+|+||+++. +.++|+|||.+......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999988854 356899999999999999999999999999999999999964 67999999987443221
Q ss_pred --CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 173 --RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
.....+++.|+|||.+.+..++.++|+||+|+++++|++|..||...+..........+. ....+..++.++.+++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~ 238 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP-TPSLPETYSRQLNSIMQ 238 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC-CCCCcchhcHHHHHHHH
Confidence 223456788999999988888999999999999999999999998877777666665542 22234468899999999
Q ss_pred HhcccCCCCCCCHHhhhcCccc
Q 023270 251 RLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~~~~ 272 (284)
+||..+|.+||+++++++||||
T Consensus 239 ~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 239 SMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHhcCChhhCcCHHHHhhCCCC
Confidence 9999999999999999999997
No 306
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.8e-41 Score=280.59 Aligned_cols=250 Identities=20% Similarity=0.371 Sum_probs=208.7
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.+...+|++.+.||.|+||+||+|.+..++. +|++|++...... .....+.+|+..++.++|+|++++++++..
T Consensus 3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP--KANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred ccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCH--HHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3567899999999999999999999877766 4799988644322 234567889999999999999999998865
Q ss_pred CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
...+++++++++++|.+++... +.++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4578999999999999999774 46899999999999999999999999999999999999999999999999987543
Q ss_pred CCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 170 RSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 170 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
.... ....+++.|+|||...+..++.++||||||++++++++ |..||...........+.. ....+.....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 238 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERLPQPPICTI 238 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCCCccCCH
Confidence 2211 12234567999999988889999999999999999998 9999987776665554443 333444557899
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+++.+||..||.+||++.++++
T Consensus 239 ~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 239 DVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999999999999994
No 307
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.8e-41 Score=277.59 Aligned_cols=245 Identities=25% Similarity=0.464 Sum_probs=211.8
Q ss_pred cEeeeeeccCCCeEEEEEEEecCC----ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESK----HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
+++.+.||.|+||.||++.+..++ ..|++|.+....... ..+.+..|+..+..++|+|++++++++...+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ--QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH--HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 467889999999999999998766 889999986543321 34678899999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc
Q 023270 97 ILEYAHRGELYRELRKHRR--FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH 174 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 174 (284)
++|++++++|.+++..... +++..+..++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999999999977654 89999999999999999999999999999999999999999999999999854433211
Q ss_pred ----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 175 ----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 175 ----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
...+++.|+|||.+.+..++.++|+||+|+++++|++ |..||...+............. .......+.++.+++
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i 237 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR-LPKPENCPPEIYKLM 237 (258)
T ss_pred cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-CCCCCcCCHHHHHHH
Confidence 1225678999999988889999999999999999998 8999988888777777766543 334456899999999
Q ss_pred HHhcccCCCCCCCHHhhhc
Q 023270 250 SRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~ 268 (284)
.+||..+|++|||+.++++
T Consensus 238 ~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 238 LQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHCcCChhhCcCHHHHHh
Confidence 9999999999999999986
No 308
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-43 Score=299.76 Aligned_cols=253 Identities=27% Similarity=0.466 Sum_probs=225.0
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|.=++.||+|+||.||-|.+..+...||||++....-.+.+--+.+.+|++.+++++|||.+.+-+.+..+...++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 66678899999999999999999999999999765555444446778899999999999999999999999999999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCC
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGT 179 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 179 (284)
|- ||-.+++.-. +++.+.++..|..+.+.||.|||+++.+|+|||..|||++..|.|||.|||.+.... +.+..+||
T Consensus 108 Cl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-PAnsFvGT 185 (948)
T KOG0577|consen 108 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-PANSFVGT 185 (948)
T ss_pred Hh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-chhcccCC
Confidence 95 6999998876 579999999999999999999999999999999999999999999999999885543 44567899
Q ss_pred CcccCccccC---CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccC
Q 023270 180 LDYLAPEMVE---NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKD 256 (284)
Q Consensus 180 ~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 256 (284)
|.|+|||++. .+.|+-+.||||||++..+|...++|.-..+....+..+-+...+.-..+.-+..+++||..||..-
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKi 265 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKI 265 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhC
Confidence 9999999874 6779999999999999999999999988888888887777765555555567889999999999999
Q ss_pred CCCCCCHHhhhcCcccccc
Q 023270 257 SSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 257 p~~Rps~~~il~~~~~~~~ 275 (284)
|.+|||++++|.|+|++..
T Consensus 266 pqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 266 PQERPTSEELLKHRFVLRE 284 (948)
T ss_pred cccCCcHHHHhhcchhccC
Confidence 9999999999999999875
No 309
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4e-41 Score=281.51 Aligned_cols=249 Identities=32% Similarity=0.509 Sum_probs=205.2
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEEe
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~e 99 (284)
|++.+.||+|++|+||+|....+++.|++|.+........ .....+|+..+..++ |+|++++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh--HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 7889999999999999999988999999999865432211 123346888888998 9999999999999999999999
Q ss_pred ecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--Ccc
Q 023270 100 YAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RHT 175 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~ 175 (284)
|+ +++|.+.+.... .++...++.++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence 99 678988887764 7899999999999999999999999999999999999999999999999988544332 223
Q ss_pred ccCCCcccCccccC-CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------------------
Q 023270 176 MCGTLDYLAPEMVE-NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFP------------------ 236 (284)
Q Consensus 176 ~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~------------------ 236 (284)
..++..|+|||.+. +..++.++|+||||+++++|++|..||...+..+...+.........
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF 237 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence 45678899999875 44578999999999999999999999987766555444332111100
Q ss_pred ----------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 237 ----------SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 237 ----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
..+..+.++.++++.||..+|++|||+++++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 011236789999999999999999999999999997
No 310
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.5e-41 Score=282.33 Aligned_cols=246 Identities=24% Similarity=0.437 Sum_probs=206.3
Q ss_pred CcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
+|++.+.||+|+||.||++.+.. ....+++|.+...... .....+.+|+..++.+.|+||+++++.+..++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 58899999999999999998753 2346888887644322 2246788899999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 023270 95 FLILEYAHRGELYRELRKH------------------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENL 150 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~------------------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ni 150 (284)
++++||+.+++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999988642 2478889999999999999999999999999999999
Q ss_pred EecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHH
Q 023270 151 LLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDT 224 (284)
Q Consensus 151 l~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~ 224 (284)
+++.++.++|+|||++...... .....++..|+|||.+.+..++.++||||||+++++|++ |..||.+......
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~ 238 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 9999999999999987543211 122234567999999988889999999999999999998 9999988887776
Q ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 225 FRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
....... .....+...+.++.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 239 FNLLKTG-YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHhCC-CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 6655443 344445578999999999999999999999999975
No 311
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.9e-41 Score=284.00 Aligned_cols=254 Identities=24% Similarity=0.446 Sum_probs=213.4
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEec-------CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccce
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVE-------SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRL 84 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~ 84 (284)
.+++...+|.+.+.||.|+||.||++.... ++..|++|.+..... ....+.+.+|+..++.+ +|+||+++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~ 86 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINL 86 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc--hHHHHHHHHHHHHHHhhccCCCchhe
Confidence 467888999999999999999999997532 344689998864321 22346788899999999 79999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKH----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
++++..++..++++||+++++|.+++.+. ..++...++.++.|++.||.|||+.|++|+||+|+
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 99999999999999999999999999764 24678889999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChH
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQK 222 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 222 (284)
||+++.++.++|+|||.+...... .....++..|+|||++.+..++.++||||||++++++++ |..||...+..
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 999999999999999998544321 112234567999999988889999999999999999998 88999888887
Q ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 223 DTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+....+.... ....+..++.++.+++.+||..+|.+|||+.++++.
T Consensus 247 ~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 247 ELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHcCC-cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 7777665543 333445788999999999999999999999999875
No 312
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.4e-41 Score=287.99 Aligned_cols=254 Identities=31% Similarity=0.518 Sum_probs=203.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC-----
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD----- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~----- 91 (284)
...+|++.+.||.|++|.||++.+..+++.+++|.+....... .....+.+|++.++.++|+||+++++++.+.
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 3689999999999999999999999999999999985433211 1123456799999999999999999987543
Q ss_pred ---CeEEEEEeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 92 ---ERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 92 ---~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
..+++|+||++. ++...+.. ...++...+..++.|+++||.|||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus 85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 357999999975 67666654 3579999999999999999999999999999999999999999999999999874
Q ss_pred ccCCCCc--------------cccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Q 023270 168 QSRSKRH--------------TMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVD 232 (284)
Q Consensus 168 ~~~~~~~--------------~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 232 (284)
....... ...+++.|+|||.+.+. .++.++||||||+++++|++|.+||.+.+.......+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 3322111 11346779999987654 47899999999999999999999998877766555443311
Q ss_pred CCCC---------------------C-------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 233 LSFP---------------------S-------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 233 ~~~~---------------------~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
.... . ...+++.+.+++.+||..||++|||+.+++.||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 1000 0 01345678999999999999999999999999998
No 313
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=272.48 Aligned_cols=261 Identities=25% Similarity=0.466 Sum_probs=217.6
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEe
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFH 89 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~ 89 (284)
.+......++.+.+..||.|+.|+|+++....+|+.+|||.+...... +..+.+...+.++...+ .|+|++.+++|.
T Consensus 84 g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk--ee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 84 GQRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred CcccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH--HHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 344556677788889999999999999999999999999999765533 34566777777766554 799999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.+...++.||.+. ..+..++++. +++++..+-.+...+++||.||.+ +|++|+|+||+|||++..|++||+|||++.
T Consensus 162 ~n~dV~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG 240 (391)
T KOG0983|consen 162 TNTDVFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG 240 (391)
T ss_pred eCchHHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence 9999999999986 3667766665 578999999999999999999985 599999999999999999999999999984
Q ss_pred ccC--CCCccccCCCcccCccccCCC---CCCchhhHhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCCC-C
Q 023270 168 QSR--SKRHTMCGTLDYLAPEMVENK---EHDYAVDNWTLGILCYEFLYGAPPFEA-ESQKDTFRRIMKVDLSFPSAP-S 240 (284)
Q Consensus 168 ~~~--~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~-~ 240 (284)
... .......|-+.|+|||.+... .|+..+||||||+++++|.||..||.+ .++.+.+.+++....+.-... .
T Consensus 241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~g 320 (391)
T KOG0983|consen 241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMG 320 (391)
T ss_pred eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccC
Confidence 332 333556788999999998644 588899999999999999999999987 566788888887543222222 4
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
+++.+++|+..||..|+++||.+.++|+|||+..
T Consensus 321 FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 321 FSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred cCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 8999999999999999999999999999999875
No 314
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.3e-41 Score=280.94 Aligned_cols=247 Identities=25% Similarity=0.425 Sum_probs=198.5
Q ss_pred cCc-EeeeeeccCCCeEEEEEEE----ecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--
Q 023270 19 QDF-EIGRPLGKGKFGRVYLVRE----VESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD-- 91 (284)
Q Consensus 19 ~~y-~~~~~lg~g~~~~v~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~-- 91 (284)
.+| ++.+.||.|+||+||++.. ..++..|++|.+...... .....+.+|++.++.++|+|++++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ--QNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 9999999999999987653 346778999998654321 2335677899999999999999999987653
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
...+++|||+++++|.+++... .+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 4689999999999999998764 589999999999999999999999999999999999999999999999999754332
Q ss_pred CC------ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH--------------HHHHHHHhc
Q 023270 172 KR------HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK--------------DTFRRIMKV 231 (284)
Q Consensus 172 ~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~--------------~~~~~~~~~ 231 (284)
.. ....++..|+|||.+.+...+.++||||||+++++|++|..||...... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence 11 1123456699999998888999999999999999999999998643321 111111222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 232 DLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
....+.+..++.++.+++.+||.++|++|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 2233334567899999999999999999999999985
No 315
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.9e-41 Score=281.82 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=210.5
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEec-----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVE-----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~-----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
+..++|++.+.||.|+||.||+|.+.. ++..|++|.+..... ......+.+|+..++.+.|+|++++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 445789999999999999999998753 577899999865432 2234678889999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 91 DERIFLILEYAHRGELYRELRKHR----------------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~----------------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
++..++++||+++++|.+++.... .++...++.++.|++.||.+||+.|++|+||+|+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 999999999999999999986432 3678889999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChH
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQK 222 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 222 (284)
||+++.++.++|+|||.+...... ......+..|+|||.+.+..++.++|+||||+++++|++ |..||.+.+..
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999987533211 112234567999999988889999999999999999997 88899888887
Q ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 223 DTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+....+..+.. .+.++.++.++.+++.+||..+|.+|||++++++
T Consensus 240 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 EVIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 77776665443 2334468899999999999999999999999875
No 316
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.1e-41 Score=280.84 Aligned_cols=254 Identities=40% Similarity=0.679 Sum_probs=210.6
Q ss_pred CcEeeeeeccCCCeEEEEEEEe---cCCceEEEEehhhhhHH-HHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIE-KYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~-~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~ 94 (284)
+|++.+.||.|++|.||++.+. .+++.|++|++...... .......+..|++++.++ +|++++++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 5899999999999999999864 36788999998654332 233446678899999999 599999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-- 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-- 172 (284)
++|+||+++++|.+++.....++...++.++.|++.+|.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence 999999999999999988788999999999999999999999999999999999999999999999999987443221
Q ss_pred --CccccCCCcccCccccCCCC--CCchhhHhhHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcCCCCCCCCCCCHH
Q 023270 173 --RHTMCGTLDYLAPEMVENKE--HDYAVDNWTLGILCYEFLYGAPPFEAES----QKDTFRRIMKVDLSFPSAPSISAE 244 (284)
Q Consensus 173 --~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
.....++..|+|||.+.+.. .+.++|+||||+++++|++|..||.... ..+......... .+.+..++.+
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 238 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK--PPFPKTMSAE 238 (288)
T ss_pred cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC--CCCCcccCHH
Confidence 12234788999999987655 7889999999999999999999996432 223333333332 3344468899
Q ss_pred HHHHHHHhcccCCCCCCC---HHhhhcCcccccc
Q 023270 245 AKHLISRLLVKDSSKRLS---LQKIMEHPWIIKN 275 (284)
Q Consensus 245 l~~li~~~l~~~p~~Rps---~~~il~~~~~~~~ 275 (284)
+.+++.+||+.+|++||| +.++|+||||++.
T Consensus 239 l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 239 ARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 999999999999999998 5678999999875
No 317
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.3e-41 Score=275.61 Aligned_cols=247 Identities=22% Similarity=0.398 Sum_probs=210.5
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
...+|++.+.||.|++|.||++.+. ++..+++|.+....... ..+.+|++.++.++|++++++++++......++
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSE----EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICL 76 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCH----HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEE
Confidence 4578999999999999999999875 46789999986544332 357789999999999999999999999999999
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-- 173 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-- 173 (284)
|+||+++++|.+++... ..++++.++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999999999998765 468999999999999999999999999999999999999999999999999875432221
Q ss_pred --ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 023270 174 --HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLIS 250 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (284)
....++..|+|||.+.+..++.++|+||||++++++++ |..||...........+..+. ....+...+.++.+|+.
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-RLYKPRLASQSVYELMQ 235 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-CCCCCCCCCHHHHHHHH
Confidence 12234568999999988889999999999999999998 999999888877777766543 22333457899999999
Q ss_pred HhcccCCCCCCCHHhhhcC
Q 023270 251 RLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 251 ~~l~~~p~~Rps~~~il~~ 269 (284)
+||..+|.+|||++++++.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHcccChhhCCCHHHHHHh
Confidence 9999999999999999864
No 318
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5.5e-41 Score=287.09 Aligned_cols=257 Identities=28% Similarity=0.447 Sum_probs=206.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecC--CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEec----CC
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVES--KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHD----DE 92 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~----~~ 92 (284)
+|++.+.||+|+||.||++.+..+ +..|++|.+..... .....+.+.+|+.+++.+ +|+||+++++.... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 589999999999999999999888 88999999754221 122245667788999888 59999999987532 24
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
..++++++++ ++|.+++.....++...++.++.|++.||.|||..|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 6789999986 589999988888999999999999999999999999999999999999999999999999987533211
Q ss_pred -------CccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC-----------
Q 023270 173 -------RHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL----------- 233 (284)
Q Consensus 173 -------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~----------- 233 (284)
.....+++.|+|||.+.+ ..++.++|+||+|++++++++|.+||...+.......+.....
T Consensus 159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (332)
T cd07857 159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG 238 (332)
T ss_pred cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence 123357888999998765 4588999999999999999999999987665443332222100
Q ss_pred -----------------C-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 234 -----------------S-FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 234 -----------------~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
. ....+..+.++.+++.+||..||++|||+.+++.||||++.-+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~ 301 (332)
T cd07857 239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDP 301 (332)
T ss_pred hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCc
Confidence 0 00123467899999999999999999999999999999866543
No 319
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.5e-41 Score=279.11 Aligned_cols=247 Identities=19% Similarity=0.339 Sum_probs=206.6
Q ss_pred cEeeeeeccCCCeEEEEEEEecCC---ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe----
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESK---HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER---- 93 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~---- 93 (284)
|++.+.||+|+||.||+|....++ ..|++|.+....... .....+.+|+..++.++|+|++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY-SEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 678999999999999999876543 779999986543322 234578889999999999999999998865554
Q ss_pred --EEEEEeecCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 94 --IFLILEYAHRGELYRELRKH------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 94 --~~~v~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
.++++||+++++|..++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999888542 3589999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCC
Q 023270 166 SVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAP 239 (284)
Q Consensus 166 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
+....... .....+..|+|||.+.+..++.++||||||++++++++ |..||......+....+..+. ....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~ 238 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN-RLKQPE 238 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCc
Confidence 75432221 11234567999999988889999999999999999999 999998888777776666543 344455
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 240 SISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.++.++.+++.+||..||.+|||+.+++++
T Consensus 239 ~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 239 DCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 789999999999999999999999999864
No 320
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-42 Score=291.59 Aligned_cols=247 Identities=26% Similarity=0.420 Sum_probs=198.5
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-eEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE-RIFLI 97 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~-~~~~v 97 (284)
++|.-...||+|+||+||++.... +..||||++....... .++|.+|+.++.+++|+|+++++|||.+++ ..++|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 578888899999999999998754 4899999886654332 345999999999999999999999999998 59999
Q ss_pred EeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCCCCeEecCCCCEEEeecccccccCC-
Q 023270 98 LEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENH---VIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS- 171 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~g---i~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~- 171 (284)
+||++.|+|.+.+.... +++|..+.+|+.+++.||+|||... |+|+||||+|||+|.+.++||+|||++.....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 99999999999997764 8999999999999999999999864 99999999999999999999999999844433
Q ss_pred CCcc--c-cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhc-CCCCCCC---
Q 023270 172 KRHT--M-CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES------QKDTFRRIMKV-DLSFPSA--- 238 (284)
Q Consensus 172 ~~~~--~-~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~------~~~~~~~~~~~-~~~~~~~--- 238 (284)
.... . .|+.+|+|||+...+..+.++||||||++++|++||+.+..... ..+........ .......
T Consensus 231 ~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l 310 (361)
T KOG1187|consen 231 DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRL 310 (361)
T ss_pred ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCc
Confidence 2222 2 78999999999999999999999999999999999998776432 11211122221 1111111
Q ss_pred --CCCC--HH---HHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 239 --PSIS--AE---AKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 239 --~~~~--~~---l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
...+ .+ +..+...|+..+|++||++.++++.
T Consensus 311 ~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 311 KEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE 348 (361)
T ss_pred cCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence 1223 22 5577779999999999999997543
No 321
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.2e-41 Score=293.15 Aligned_cols=257 Identities=23% Similarity=0.400 Sum_probs=213.2
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccce
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRL 84 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~ 84 (284)
...+++...+|.+.+.||.|+||.||+|.+. .++..||+|++....... ..+.+.+|+.++..+. |+||+++
T Consensus 29 ~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~~E~~~l~~l~~H~niv~~ 106 (401)
T cd05107 29 DSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS--EKQALMSELKIMSHLGPHLNIVNL 106 (401)
T ss_pred CCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh--HHHHHHHHHHHHHhcCCCCCeEEE
Confidence 3447778888999999999999999999854 345679999996543222 2356788999999997 9999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhcC--------------------------------------------------
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKHR-------------------------------------------------- 114 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-------------------------------------------------- 114 (284)
++++..++..++|+||+++++|.+++..++
T Consensus 107 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 107 LGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred EEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 999999999999999999999999986532
Q ss_pred ------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 023270 115 ------------------------------------------------RFTEQQAATYIASLTNALAYCHENHVIHRDIK 146 (284)
Q Consensus 115 ------------------------------------------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~ 146 (284)
.++...++.++.|++.||.|||+.|++|+||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlk 266 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLA 266 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCC
Confidence 25667788899999999999999999999999
Q ss_pred CCCeEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCC
Q 023270 147 PENLLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAES 220 (284)
Q Consensus 147 p~nil~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~ 220 (284)
|+||+++.++.++|+|||++...... .....++..|+|||.+.+..++.++|+||||++++++++ |..||....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999998543211 122345678999999988889999999999999999998 889998766
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 221 QKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
..+..............+..++.++.+++.+||..+|.+||++.+|++.
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 347 MNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred chHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 6555555444444444555789999999999999999999999999874
No 322
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.3e-41 Score=286.53 Aligned_cols=254 Identities=24% Similarity=0.453 Sum_probs=212.2
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecC-------CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccce
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVES-------KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRL 84 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~ 84 (284)
.+++...+|++.+.||+|+||.||+|.+... ...|++|.+...... ...+.+.+|+++++++ +|+||+++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD--KDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH--HHHHHHHHHHHHHHhhcCCCCeeee
Confidence 4566667899999999999999999986532 235899988643222 2346788899999999 79999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
++++..++..++++||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999999999999987532 3678889999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChH
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQK 222 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~ 222 (284)
||+++.++.++|+|||++....... ....++..|+|||.+.+..++.++||||||+++++|++ |..||...+..
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 9999999999999999875433211 11223467999999999889999999999999999998 89999888877
Q ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 223 DTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+....+.... ........+.++.+++.+||..+|.+|||+.+++++
T Consensus 244 ~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 244 ELFKLLKEGH-RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 7776665543 333445688999999999999999999999999987
No 323
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-40 Score=277.80 Aligned_cols=250 Identities=22% Similarity=0.382 Sum_probs=211.8
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.++..+|++.+.||+|+||+||++.+..++. .+++|....... ......+.+|+..+..++|+|++++++++..
T Consensus 3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T cd05057 3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS 80 (279)
T ss_pred ccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 4677899999999999999999999876655 588998765432 2334677889999999999999999999876
Q ss_pred CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+..++|+||+++++|.+++.+. ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 7899999999999999999875 46899999999999999999999999999999999999999999999999987543
Q ss_pred CCCCc-----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 170 RSKRH-----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 170 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
..... ...++..|+|||.+.+..++.++|+||||++++++++ |..||......+....+... ...+.+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 238 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLPQPPICTI 238 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCCCCCCCCH
Confidence 32211 1113467999999988889999999999999999998 99999988877766666543 33444556889
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+++.+||..+|.+||++.++++
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999999999999875
No 324
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.5e-41 Score=288.73 Aligned_cols=254 Identities=23% Similarity=0.431 Sum_probs=204.1
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEe-----cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeE
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREV-----ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGW 87 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~ 87 (284)
+.+...+|++.+.||.|+||.||+|.+. .+++.||+|.+...... ...+.+.+|+.++.++ +|+|+++++++
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~ 79 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGA 79 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcce
Confidence 3455569999999999999999999853 45678999998653322 2245677899999999 68999999998
Q ss_pred EecC-CeEEEEEeecCCCchHHHHHhc-----------------------------------------------------
Q 023270 88 FHDD-ERIFLILEYAHRGELYRELRKH----------------------------------------------------- 113 (284)
Q Consensus 88 ~~~~-~~~~~v~e~~~~~~L~~~l~~~----------------------------------------------------- 113 (284)
+... ...++++||+++++|.+++...
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 7654 5689999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----Cc
Q 023270 114 --------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK-----RH 174 (284)
Q Consensus 114 --------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-----~~ 174 (284)
..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcC
Confidence 13577888899999999999999999999999999999999999999999987543211 11
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
...++..|+|||.+.+..++.++|+||||++++++++ |..||.....................+...++++.+++..||
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl 319 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW 319 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHc
Confidence 2234567999999988889999999999999999997 999997655433333333333333444457889999999999
Q ss_pred ccCCCCCCCHHhhhcC
Q 023270 254 VKDSSKRLSLQKIMEH 269 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~ 269 (284)
..+|.+|||+.++++|
T Consensus 320 ~~~p~~Rps~~eil~~ 335 (343)
T cd05103 320 HGEPSQRPTFSELVEH 335 (343)
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999986
No 325
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-40 Score=274.61 Aligned_cols=248 Identities=21% Similarity=0.396 Sum_probs=208.9
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
+++-..+|++.+.||+|+||.||++.+ ..+..+++|.+..... ..+.+.+|+.+++.++|+|++++++++.. +.
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~ 74 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP 74 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEe-cCCccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CC
Confidence 356678999999999999999999975 4566799998864322 23567889999999999999999999877 77
Q ss_pred EEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC
Q 023270 94 IFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 171 (284)
.++++||+++++|.+++... ..++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 89999999999999999764 3578889999999999999999999999999999999999999999999998743321
Q ss_pred C----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 172 K----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 172 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
. .....++..|+|||.+....++.++|+||||++++++++ |..||...+.......+... ...+.....+.++.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELY 233 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCCCCcccCCHHHH
Confidence 1 112234567999999988889999999999999999998 99999988777666655544 34444567899999
Q ss_pred HHHHHhcccCCCCCCCHHhhhc
Q 023270 247 HLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (284)
+++.+|+..+|++||++.++++
T Consensus 234 ~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 234 NIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHcccCcccCcCHHHHHH
Confidence 9999999999999999998864
No 326
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.3e-41 Score=276.02 Aligned_cols=229 Identities=25% Similarity=0.396 Sum_probs=192.7
Q ss_pred CCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCchHHH
Q 023270 30 GKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRE 109 (284)
Q Consensus 30 g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 109 (284)
|.++.||+|.+..+++.|++|.+...... .++...+....|+|++++++++.+++..+++|||+++++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--------SRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh--------hhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 89999999999999999999999664321 2233444455799999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCCCcccCccccC
Q 023270 110 LRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVE 189 (284)
Q Consensus 110 l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~ 189 (284)
+.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++++|||.+...........++..|+|||...
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 98888899999999999999999999999999999999999999999999999998755444444445567899999998
Q ss_pred CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----H
Q 023270 190 NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSL-----Q 264 (284)
Q Consensus 190 ~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~ 264 (284)
+..+++++|+||+|++++++++|..|+....... ........++.+++.+++++++||+.||.+||++ +
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~ 229 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVE 229 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchH
Confidence 8889999999999999999999998875432211 1111222334688999999999999999999986 9
Q ss_pred hhhcCccc
Q 023270 265 KIMEHPWI 272 (284)
Q Consensus 265 ~il~~~~~ 272 (284)
+++.||||
T Consensus 230 ~~~~h~~~ 237 (237)
T cd05576 230 DIKSHPFF 237 (237)
T ss_pred HHHcCCCC
Confidence 99999998
No 327
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.5e-41 Score=277.97 Aligned_cols=247 Identities=19% Similarity=0.344 Sum_probs=203.8
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCc--eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC------C
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKH--PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD------E 92 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~------~ 92 (284)
|.+.+.||.|+||.||++.+..++. .+++|.+....... ...+.+..|+..++.++|+|++++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR-SEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 4578899999999999999877765 58999875532222 3346778899999999999999999986432 2
Q ss_pred eEEEEEeecCCCchHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 93 RIFLILEYAHRGELYRELRK------HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~------~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
..++++||+++++|..++.. ...++...+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 57899999999999988742 134789999999999999999999999999999999999999999999999998
Q ss_pred cccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 023270 167 VQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPS 240 (284)
Q Consensus 167 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
....... .....++.|+|||.+.+..++.++|+||||++++++++ |..||...........+..+. .....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 238 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN-RLKQPPD 238 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCCCC
Confidence 5433211 12234667999999999899999999999999999999 899998887777766665543 3334457
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
++..+.+++.+||+.+|.+|||+++++++
T Consensus 239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 239 CLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 88999999999999999999999999864
No 328
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=274.45 Aligned_cols=251 Identities=31% Similarity=0.615 Sum_probs=213.3
Q ss_pred cccCcEee-eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHH-HhCCCCcccceeeEEec----
Q 023270 17 SLQDFEIG-RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQ-SSLRHPNILRLYGWFHD---- 90 (284)
Q Consensus 17 ~~~~y~~~-~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~-~~l~h~~i~~~~~~~~~---- 90 (284)
...+|++. ++||.|-.|.|-.+.++.+++.+|+|++... +..++|+++- ..-.|+||+.+++++++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 34567775 4689999999999999999999999998432 2445666543 23369999999998853
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC---CCCEEEeeccc
Q 023270 91 DERIFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH---EGRLKIGDFGW 165 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~---~~~~~l~d~~~ 165 (284)
...+.+|||.++||.|.+.++..+ .+++.++..|+.||..|+.|||+.+|.|+||||+|+|.+. |..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 357899999999999999998875 4999999999999999999999999999999999999964 56899999999
Q ss_pred ccccC--CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcCCCCCCC-
Q 023270 166 SVQSR--SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES----QKDTFRRIMKVDLSFPSA- 238 (284)
Q Consensus 166 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~- 238 (284)
+.... ......+.||.|.|||++....++...|+||+|++||-|++|.+||-... .....+++..+.+.++.+
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE 290 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE 290 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChh
Confidence 96655 44456678999999999999999999999999999999999999996543 344566677777776664
Q ss_pred -CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 239 -PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 239 -~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
+.+|.+.+++|+.+|..+|.+|.|++++++|||+.+.
T Consensus 291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 5899999999999999999999999999999999764
No 329
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=285.50 Aligned_cols=251 Identities=28% Similarity=0.478 Sum_probs=217.9
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|.++.+||+|+||.||+|.++++|+.+|||.+.... .++++.+|+.++.+++.++++++++.+.....+++||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 889999999999999999999999999999985543 356888999999999999999999999888999999999
Q ss_pred cCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCccc
Q 023270 101 AHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHTM 176 (284)
Q Consensus 101 ~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~~ 176 (284)
|.-|+..+.++. +++|+++++..+++..+.+|+|||...-+|+||+..|||++.+|++||.|||.+... ....+.-
T Consensus 110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 999999999864 578999999999999999999999999999999999999999999999999987433 3344556
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK-VDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.|+|-|+|||++..-.|+-++||||||++..+|..|++||.+-.+...+.-+.. ....+..+..-+.++.+|+++||..
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK 269 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIK 269 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcC
Confidence 799999999999988899999999999999999999999987666433322211 1122222334577899999999999
Q ss_pred CCCCCCCHHhhhcCccccccC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~ 276 (284)
+|++|.|+.++++|||+++.+
T Consensus 270 ~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 270 KPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred CHHHHHHHHHHhhhhhhcCCC
Confidence 999999999999999999984
No 330
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-40 Score=277.66 Aligned_cols=251 Identities=19% Similarity=0.322 Sum_probs=206.0
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.+...+|++.+.||.|+||+||++.+..++. .+++|.+.... .......+..++..+..+.|+||+++++++.
T Consensus 3 ~~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~- 79 (279)
T cd05111 3 ILKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP- 79 (279)
T ss_pred cCCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC-
Confidence 4567899999999999999999999877766 47777774322 1223356777888889999999999999875
Q ss_pred CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+...++++|++++++|.+++... +.+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 45678899999999999999764 57899999999999999999999999999999999999999999999999988543
Q ss_pred CCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 170 RSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 170 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
... .....++..|+|||.+.+..++.++||||||+++|++++ |..||.+.........+.. ....+.+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 238 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-GERLAQPQICTI 238 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCCCCCCCCH
Confidence 211 112335678999999988889999999999999999998 9999988776654443333 333344445778
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
++.+++.+|+..+|.+|||++++++.
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 89999999999999999999999873
No 331
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-40 Score=283.04 Aligned_cols=253 Identities=23% Similarity=0.423 Sum_probs=210.0
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEec-------CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCccccee
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVE-------SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLY 85 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~ 85 (284)
+.+...+|.+.+.||+|++|.||++.+.. ....+++|.+..... ......+..|+.+++.+ +|+||++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT--DKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 45556789999999999999999997632 344689998764322 22345678899999999 599999999
Q ss_pred eEEecCCeEEEEEeecCCCchHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 023270 86 GWFHDDERIFLILEYAHRGELYRELRKH----------------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPEN 149 (284)
Q Consensus 86 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~n 149 (284)
+++..++..++++||+++++|.+++... ..++...+..++.|++.||.|||++|++|+||+|+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 9999999999999999999999999763 247889999999999999999999999999999999
Q ss_pred eEecCCCCEEEeecccccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHH
Q 023270 150 LLLDHEGRLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKD 223 (284)
Q Consensus 150 il~~~~~~~~l~d~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~ 223 (284)
|+++.++.++|+|||.+...... .....++..|+|||.+.+..++.++|+||||++++++++ |..||...+..+
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998543321 111223457999999988889999999999999999998 899998888777
Q ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 224 TFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
....+.... ....+..++.++.+++.+||..+|++|||+.++++.
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 245 LFKLLREGH-RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 776665543 233445788999999999999999999999999863
No 332
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.7e-40 Score=275.93 Aligned_cols=251 Identities=27% Similarity=0.461 Sum_probs=209.7
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecC---CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVES---KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
++...+|.+.+.||.|++|.||+|.+... ...|++|....... ....+.+.+|+..++.++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~- 78 (270)
T cd05056 2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE- 78 (270)
T ss_pred eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-
Confidence 35567899999999999999999987544 34689998865432 2234678889999999999999999998865
Q ss_pred CeEEEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 92 ERIFLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
+..++|+||+++++|.+++.+.. .++...++.++.+++.||.+||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 55789999999999999998754 58999999999999999999999999999999999999999999999999875432
Q ss_pred CCC----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHH
Q 023270 171 SKR----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 171 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
... ....++..|+|||.+....++.++|+||||++++++++ |..||...+..+....+..+. ..+.++.++.++
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTL 237 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-cCCCCCCCCHHH
Confidence 221 12223467999999988889999999999999999886 999999888777766655543 334456789999
Q ss_pred HHHHHHhcccCCCCCCCHHhhhcC
Q 023270 246 KHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.+++.+|+..+|.+|||+.++++.
T Consensus 238 ~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 238 YSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999999998864
No 333
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.5e-40 Score=273.23 Aligned_cols=240 Identities=27% Similarity=0.407 Sum_probs=204.5
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
++||.|++|.||++.+.. ++.|++|.+...... .....+.+|++++++++|+||+++++++...+..++|+|+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 479999999999999877 999999988654433 23467888999999999999999999999999999999999999
Q ss_pred chHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC-----ccccC
Q 023270 105 ELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCG 178 (284)
Q Consensus 105 ~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-----~~~~~ 178 (284)
+|.+++... ..++...+..++.+++.++.+||++|++|+||+|+||+++.++.++|+|||.+....... .....
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999998664 468999999999999999999999999999999999999999999999999875433111 11123
Q ss_pred CCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCC
Q 023270 179 TLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDS 257 (284)
Q Consensus 179 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (284)
+..|+|||.+.++.++.++|+||||++++++++ |..||............... .....+...+.++.+++.+||..+|
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p 236 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-YRMPAPQLCPEEIYRLMLQCWAYDP 236 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-CCCCCCccCCHHHHHHHHHHhccCh
Confidence 456999999988889999999999999999999 89999887776666555443 3344455788999999999999999
Q ss_pred CCCCCHHhhhc
Q 023270 258 SKRLSLQKIME 268 (284)
Q Consensus 258 ~~Rps~~~il~ 268 (284)
.+|||++++++
T Consensus 237 ~~Rp~~~ell~ 247 (251)
T cd05041 237 ENRPSFSEIYN 247 (251)
T ss_pred hhCcCHHHHHH
Confidence 99999999986
No 334
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.5e-41 Score=279.85 Aligned_cols=248 Identities=26% Similarity=0.428 Sum_probs=200.7
Q ss_pred CcEeeeeeccCCCeEEEEEEE----ecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC--Ce
Q 023270 20 DFEIGRPLGKGKFGRVYLVRE----VESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD--ER 93 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~--~~ 93 (284)
-|++++.||+|+||.||++.. ..++..|++|.+..... ......+.+|+.+++.+.|+|++++.+++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc--HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 478999999999999999974 45678899999865432 22345788999999999999999999988765 57
Q ss_pred EEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 94 IFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.++|+||+++++|.+++.+. ..++...++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999999999999765 36899999999999999999999999999999999999999999999999987543221
Q ss_pred C------ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCC--------------hHHHHHHHHhcC
Q 023270 173 R------HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES--------------QKDTFRRIMKVD 232 (284)
Q Consensus 173 ~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~--------------~~~~~~~~~~~~ 232 (284)
. ....++..|+|||.+.+..++.++||||||+++++++++..|..... ............
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG 242 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence 1 12345667999999988889999999999999999999776542211 111111222222
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 233 LSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
...+....++.++.+|+.+||+.+|.+|||++++++.
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 3344455789999999999999999999999999864
No 335
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-42 Score=300.39 Aligned_cols=247 Identities=32% Similarity=0.542 Sum_probs=215.0
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCc
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGE 105 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 105 (284)
+||.|.||+||.+++..+...+|||.+.-... ...+-+.+|+.+-++++|.||++.+|.+.+++++-|.||-.+|||
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccc---hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 58999999999999999999999999855432 234678899999999999999999999999999999999999999
Q ss_pred hHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccccccCC---CCccccC
Q 023270 106 LYRELRKH-RRF--TEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWSVQSRS---KRHTMCG 178 (284)
Q Consensus 106 L~~~l~~~-~~l--~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~~~~~---~~~~~~~ 178 (284)
|.+++++- +++ ++..+..+..||++||.|||++.|+|+|||-+||+++. .|.+||+|||-+....+ -+....|
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 99999876 566 77888889999999999999999999999999999965 69999999998754432 3345679
Q ss_pred CCcccCccccCCCC--CCchhhHhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 179 TLDYLAPEMVENKE--HDYAVDNWTLGILCYEFLYGAPPFEA-ESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 179 ~~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
|..|+|||++..++ |.+++|||||||++.+|.||++||-. .++...+.+.-.-+..++.+..++.+.+.||.+|+.+
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep 818 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP 818 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence 99999999998665 88999999999999999999999954 4555555555445556667778899999999999999
Q ss_pred CCCCCCCHHhhhcCcccccc
Q 023270 256 DSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~ 275 (284)
||.+||++.++|+.||++.+
T Consensus 819 d~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 819 DPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred CcccCccHHHhccCcccccC
Confidence 99999999999999999988
No 336
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1e-40 Score=277.40 Aligned_cols=242 Identities=24% Similarity=0.383 Sum_probs=200.6
Q ss_pred eeeccCCCeEEEEEEEecCCce--EEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEEeec
Q 023270 25 RPLGKGKFGRVYLVREVESKHP--VALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~--v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~e~~ 101 (284)
+.||.|+||.||++.+..++.. +++|.+.... .....+.+.+|+.++.++ +|+|++++++++...+..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 3689999999999998877764 5788875322 112345678899999999 7999999999999999999999999
Q ss_pred CCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 102 HRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 102 ~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
++++|.+++.... .++...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999987542 478899999999999999999999999999999999999999999999998
Q ss_pred ccccCCCC--ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q 023270 166 SVQSRSKR--HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSIS 242 (284)
Q Consensus 166 ~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
+....... .....+..|+|||++.+..++.++|+||||+++++|++ |..||...+..+....+.... .......++
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RLEKPLNCD 237 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-CCCCCCcCC
Confidence 74322111 11223567999999988889999999999999999997 999998887777766665432 333344678
Q ss_pred HHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 243 AEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.++.+++.+|+..+|.+|||+++++..
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 238 DEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 999999999999999999999999863
No 337
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-42 Score=295.24 Aligned_cols=253 Identities=26% Similarity=0.472 Sum_probs=220.8
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe--EEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER--IFLI 97 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~--~~~v 97 (284)
.+...+||.|+|-+||+|.|..+|-.||=--+..... ......+.+..|+.+|+.|+|+||+++++++.+... +-+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3456679999999999999999998887433322222 234556889999999999999999999999987765 8889
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeEecCC-CCEEEeecccccccCCCCc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENH--VIHRDIKPENLLLDHE-GRLKIGDFGWSVQSRSKRH 174 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~g--i~H~dl~p~nil~~~~-~~~~l~d~~~~~~~~~~~~ 174 (284)
+|.+..|+|..++++.+..+.+.+..|++||+.||.|||++. |+|+|||-+||+++-+ |.|||+|+|+++.......
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 999999999999999999999999999999999999999996 9999999999999755 8999999999977665554
Q ss_pred cc-cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCC-CCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 023270 175 TM-CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPF-EAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRL 252 (284)
Q Consensus 175 ~~-~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 252 (284)
.. .|||.|+|||.+. ..|++..|||||||+|+||.|+..|| +..+.-.++++...+..+......-.+++++||..|
T Consensus 202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekC 280 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKC 280 (632)
T ss_pred ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHH
Confidence 44 7999999999986 77999999999999999999999999 567888888888888766555555578999999999
Q ss_pred cccCCCCCCCHHhhhcCcccccc
Q 023270 253 LVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 253 l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
|.. .++|||+.++|.||||+..
T Consensus 281 l~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 281 LAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hcC-chhccCHHHHhhChhhccc
Confidence 998 9999999999999999986
No 338
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-40 Score=280.40 Aligned_cols=249 Identities=22% Similarity=0.358 Sum_probs=203.2
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEec----------------CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVE----------------SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI 81 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~----------------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i 81 (284)
-++|++.+.||.|+||.||++.+.. ++..+++|.+..... ......+.+|+..++.++|+|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999985432 344689999864321 2234678899999999999999
Q ss_pred cceeeEEecCCeEEEEEeecCCCchHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 023270 82 LRLYGWFHDDERIFLILEYAHRGELYRELRKHR-----------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENL 150 (284)
Q Consensus 82 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ni 150 (284)
+++++++..++..++++||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999987642 366778999999999999999999999999999999
Q ss_pred EecCCCCEEEeecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh--CCCCCCCCChHH
Q 023270 151 LLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY--GAPPFEAESQKD 223 (284)
Q Consensus 151 l~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t--g~~p~~~~~~~~ 223 (284)
+++.++.++|+|||++....... .....+..|+|||...++.++.++|+||||+++|++++ |..||...+..+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 99999999999999975432211 12233567999999888889999999999999999998 778998777666
Q ss_pred HHHHHHh------cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 224 TFRRIMK------VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 224 ~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
....... .....+.+..+++.+.+++.+||..||.+||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 242 VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5543321 11122334467899999999999999999999999875
No 339
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8.3e-41 Score=283.80 Aligned_cols=247 Identities=22% Similarity=0.354 Sum_probs=197.9
Q ss_pred CCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCchHHHH
Q 023270 31 KFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYREL 110 (284)
Q Consensus 31 ~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l 110 (284)
+++.||.++...+++.||+|++....... ...+.+.+|+..++.++|+||+++++++..++..++++||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSK-EDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccch-hHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44566666777799999999986542222 34567899999999999999999999999999999999999999999999
Q ss_pred Hhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC----------CccccC
Q 023270 111 RKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----------RHTMCG 178 (284)
Q Consensus 111 ~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----------~~~~~~ 178 (284)
... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++++||+.+...... .....+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 764 46889999999999999999999999999999999999999999999999976432211 112335
Q ss_pred CCcccCccccCCC--CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC---------------------
Q 023270 179 TLDYLAPEMVENK--EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--------------------- 235 (284)
Q Consensus 179 ~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------------------- 235 (284)
+..|+|||.+... .++.++|+||+|++++++++|..||...+......+...+....
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 6679999998663 47889999999999999999999998765544333222211000
Q ss_pred -----------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 236 -----------PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 236 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
.....++.++.+|+.+||..||.+|||++++|+||||++..++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 0011234678999999999999999999999999999987544
No 340
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-40 Score=306.92 Aligned_cols=149 Identities=33% Similarity=0.628 Sum_probs=138.0
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+.+|.+.++||.|+||+||++.+..+++.||+|++.............+..|+..+..++|+||+++++.+...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 67999999999999999999999999999999999765544444556788899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
|||+.+++|.+++...+.++...++.++.||+.||.|||..||+|+||+|+|||++.++.++|+|||++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls 151 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLS 151 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCC
Confidence 999999999999988888999999999999999999999999999999999999999999999999975
No 341
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-40 Score=277.06 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=209.6
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEec----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVE----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.+...+|++.+.||+|+||.||++.+.. ++..|++|.+.... .......+.+|+..++.++|+|++++++++..
T Consensus 2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 79 (280)
T cd05043 2 AISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIE 79 (280)
T ss_pred ccchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 3566789999999999999999999876 35778999875332 22335677889999999999999999998765
Q ss_pred -CCeEEEEEeecCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEe
Q 023270 91 -DERIFLILEYAHRGELYRELRKH--------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIG 161 (284)
Q Consensus 91 -~~~~~~v~e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~ 161 (284)
+...+++++|+++++|.+++... ..++...++.++.+++.||.|||+.|++|+||+|+||+++.++.++|+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence 46789999999999999998664 358899999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCC
Q 023270 162 DFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSF 235 (284)
Q Consensus 162 d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~ 235 (284)
|||++....... ....++..|+|||.+.+..++.++||||||++++++++ |..||...+..+........ ...
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~ 238 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YRL 238 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CCC
Confidence 999985432111 12234567999999988889999999999999999998 99999888777666555443 333
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 236 PSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.....+++++.+++.+||..+|++|||+.++++
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 444567899999999999999999999999985
No 342
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-40 Score=271.07 Aligned_cols=241 Identities=24% Similarity=0.403 Sum_probs=203.7
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
++||+|++|.||++.. .++..+++|.+...... .....+.+|+..++.++|+|++++++++...+..++|+||++++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQ--ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 4689999999999985 47889999998654322 22346788999999999999999999999999999999999999
Q ss_pred chHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----ccccCC
Q 023270 105 ELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR----HTMCGT 179 (284)
Q Consensus 105 ~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~----~~~~~~ 179 (284)
+|.+++... ..+++..+..++.+++.+|.++|+.|++|+||+|+||+++.++.++|+|||++....... .....+
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 999998764 467899999999999999999999999999999999999999999999999875432211 112335
Q ss_pred CcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCC
Q 023270 180 LDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSS 258 (284)
Q Consensus 180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (284)
..|+|||.+.+..++.++|+||||++++++++ |..||................ ....+..++.++.+++.+|+..+|.
T Consensus 158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~ 236 (250)
T cd05085 158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-RMSCPQKCPDDVYKVMQRCWDYKPE 236 (250)
T ss_pred ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcccCcc
Confidence 67999999988889999999999999999998 999998887777666665543 3344457899999999999999999
Q ss_pred CCCCHHhhhcC
Q 023270 259 KRLSLQKIMEH 269 (284)
Q Consensus 259 ~Rps~~~il~~ 269 (284)
+||++.++++.
T Consensus 237 ~Rp~~~~l~~~ 247 (250)
T cd05085 237 NRPKFSELQKE 247 (250)
T ss_pred cCCCHHHHHHH
Confidence 99999999763
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=324.62 Aligned_cols=257 Identities=29% Similarity=0.508 Sum_probs=227.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+++....||.|.||.||.+.+..+|...|+|.+.-.... ....+.+.+|+.++..++|||+++++++=...+..+|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4677888999999999999999999999999998665544 455678889999999999999999999988999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC-----
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR----- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~----- 173 (284)
|||++|+|.+.++...-.++.....+..|++.|+.|||++||||+||||.||+++.+|.+|++|||.+....++.
T Consensus 1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCH
Confidence 999999999999988888888889999999999999999999999999999999999999999999986655443
Q ss_pred --ccccCCCcccCccccCCCC---CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 174 --HTMCGTLDYLAPEMVENKE---HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
+...||+.|+|||++++.. ...+.|||||||++.||+||+.||...+..-.+.-.....-.+..+..++++.++|
T Consensus 1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dF 1473 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDF 1473 (1509)
T ss_pred HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHH
Confidence 3467999999999997654 45799999999999999999999988877766666666555666677899999999
Q ss_pred HHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
|.+||..||++|+++.||++|-|-.-+.
T Consensus 1474 le~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1474 LEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred HHHHHhcCchhhhHHHHHHHhhcccccc
Confidence 9999999999999999999999866553
No 344
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.7e-40 Score=276.76 Aligned_cols=249 Identities=26% Similarity=0.439 Sum_probs=200.8
Q ss_pred ccCcEeeeeeccCCCeEEEEEE----EecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec--C
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVR----EVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD--D 91 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~----~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~--~ 91 (284)
-++|++.+.||.|+||.||++. +..++..|++|.+..... ...+.+.+|+++++.++|+|++++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA---EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH---HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 4689999999999999999987 445788999999855432 234677889999999999999999998653 3
Q ss_pred CeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 92 ERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
...++|+||+++++|.+++... ..++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 4689999999999999999765 468999999999999999999999999999999999999999999999999875432
Q ss_pred CCCc------cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH---------------HHHHHHH
Q 023270 171 SKRH------TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK---------------DTFRRIM 229 (284)
Q Consensus 171 ~~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~---------------~~~~~~~ 229 (284)
.... ...++..|+|||.+.+..++.++|+||||+++++|++|..++...... ..+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL 239 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence 2111 112234599999998888999999999999999999987665433211 1112223
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 230 KVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
......+....++.++.+|+.+||..+|++|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 3333444455788999999999999999999999999863
No 345
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.6e-40 Score=272.17 Aligned_cols=240 Identities=24% Similarity=0.372 Sum_probs=199.8
Q ss_pred eeccCCCeEEEEEEEe--cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 26 PLGKGKFGRVYLVREV--ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
.||.|+||.||++... ..+..|++|++..... ....+.+.+|+.++++++|+||+++++++. .+..++|+||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999998765 3445689999865432 233467889999999999999999999875 4578999999999
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC------ccc
Q 023270 104 GELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR------HTM 176 (284)
Q Consensus 104 ~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~------~~~ 176 (284)
++|.+++... ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999998753 578999999999999999999999999999999999999999999999999874322211 111
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhccc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 255 (284)
.++..|+|||.+.+..++.++|+||||++++++++ |..||......+......++. ....++..++++.+++.+||..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~c~~~ 237 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK-RLDCPAECPPEMYALMKDCWIY 237 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHcCC
Confidence 22467999999988889999999999999999996 999999888877776665543 3344456799999999999999
Q ss_pred CCCCCCCHHhhhcC
Q 023270 256 DSSKRLSLQKIMEH 269 (284)
Q Consensus 256 ~p~~Rps~~~il~~ 269 (284)
+|++||+++++.+.
T Consensus 238 ~~~~Rp~~~~i~~~ 251 (257)
T cd05115 238 KWEDRPNFAKVEER 251 (257)
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999998753
No 346
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.9e-40 Score=277.36 Aligned_cols=250 Identities=24% Similarity=0.423 Sum_probs=207.1
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEec----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec--
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVE----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD-- 90 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~-- 90 (284)
...+|++.+.||.|+||.||++.... ++..+++|.+...... .....+.+|++.++.+.|+|++++++++..
T Consensus 2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~ 79 (284)
T cd05038 2 EKRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPG 79 (284)
T ss_pred chhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCC
Confidence 35678999999999999999998653 4788999998755433 335678899999999999999999998877
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+...++++||+++++|.+++.... .++...+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+...
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 557999999999999999997764 6899999999999999999999999999999999999999999999999988554
Q ss_pred CCCCc------cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH--------------HHHHHHH
Q 023270 170 RSKRH------TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK--------------DTFRRIM 229 (284)
Q Consensus 170 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~--------------~~~~~~~ 229 (284)
..... ...++..|+|||.+.+..++.++|+||||+++++|++|..|+...... .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 42211 123345699999998888999999999999999999999988653221 2223333
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 230 KVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
......+....++.++.+++.+||..+|.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 344445555577899999999999999999999999986
No 347
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=293.22 Aligned_cols=249 Identities=33% Similarity=0.562 Sum_probs=216.4
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCC
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHR 103 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 103 (284)
.+.||.|.||+||-+++..+|+.||||++.+..+.+.+ ...+++|++++..++||+|+.+--.|+..+..|+|||.+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~- 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH- 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-
Confidence 46799999999999999999999999999887766544 3789999999999999999999999999999999999996
Q ss_pred CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC---CCEEEeecccccccCCCCcc--c
Q 023270 104 GELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE---GRLKIGDFGWSVQSRSKRHT--M 176 (284)
Q Consensus 104 ~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~---~~~~l~d~~~~~~~~~~~~~--~ 176 (284)
|++.+.|.+. +.|++....-++.||+.||.|||-.+|+|+||||+|||+... -++||+|||+++..++.... -
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV 726 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV 726 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence 4777777554 579999999999999999999999999999999999999654 37999999999887765543 4
Q ss_pred cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhcc
Q 023270 177 CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF--PSAPSISAEAKHLISRLLV 254 (284)
Q Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~ 254 (284)
.|+|.|+|||++.+..+...-|+||+|+++|.-++|..||+...+ +-.++....+++ ..+..++++..+||+.+|+
T Consensus 727 VGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~PW~eis~~AidlIn~LLq 804 (888)
T KOG4236|consen 727 VGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPNPWSEISPEAIDLINNLLQ 804 (888)
T ss_pred cCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCCchhhcCHHHHHHHHHHHH
Confidence 599999999999999999999999999999999999999975433 233333333333 3455899999999999999
Q ss_pred cCCCCCCCHHhhhcCccccccC
Q 023270 255 KDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~~ 276 (284)
..-++|.|.+..|.|||+|+-|
T Consensus 805 Vkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 805 VKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred HHHHHhcchHhhccchhhhcch
Confidence 9999999999999999999865
No 348
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=251.10 Aligned_cols=255 Identities=25% Similarity=0.514 Sum_probs=218.4
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+.|.-.++||+|.+|+||+++..++++.||+|.+.....++ .......+|+-+++.++|.||++++++...+..+.+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde-gvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC-CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 56788899999999999999999999999999986654332 33456678999999999999999999999999999999
Q ss_pred eecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCc---
Q 023270 99 EYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH--- 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~--- 174 (284)
|||+. .|..+..+ ++.++.+.++.++.|++.++.++|++++.|+|++|.|.+++.+|.+||.|||++...+-+..
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 99975 88888765 47899999999999999999999999999999999999999999999999999866554432
Q ss_pred cccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC--CCCCCC------------
Q 023270 175 TMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVD--LSFPSA------------ 238 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~--~~~~~~------------ 238 (284)
....+.+|.||.++.+.. ++...|+||.||++.++.. |.+.|.+.+-.+.+.++.... .....+
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 234688999999998877 7889999999999999985 889999999888888776531 111111
Q ss_pred -------------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 239 -------------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 239 -------------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
+.++..-++++..+|.-+|.+|.++++.|+||||.+.
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 2344567899999999999999999999999999875
No 349
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=290.72 Aligned_cols=265 Identities=38% Similarity=0.604 Sum_probs=245.0
Q ss_pred hhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 10 DNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
......+.+++++++..||.||||.|-++........+|+|.+++.-+-.....+.+..|-++|...+.+.|++++-.|.
T Consensus 411 ~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr 490 (732)
T KOG0614|consen 411 AEEFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR 490 (732)
T ss_pred HhhhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc
Confidence 34667889999999999999999999999987776678999998877666566778888999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+..+.|++||-|=||.++..++..+.++...++-++..+++|+.|||++||+++||||+|.+++.+|-+||.|||++...
T Consensus 491 d~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 491 DSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI 570 (732)
T ss_pred cchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999665
Q ss_pred CC--CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 170 RS--KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 170 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
.. .+-..+|||.|.|||++.+..++.+.|.||||+++++|++|.+||.+.++..++..++++......+..++....+
T Consensus 571 ~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 571 GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATD 650 (732)
T ss_pred ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHH
Confidence 43 4455679999999999999999999999999999999999999999999999999999998888888899999999
Q ss_pred HHHHhcccCCCCCCC-----HHhhhcCccccc
Q 023270 248 LISRLLVKDSSKRLS-----LQKIMEHPWIIK 274 (284)
Q Consensus 248 li~~~l~~~p~~Rps-----~~~il~~~~~~~ 274 (284)
+|+++...+|.+|.- +.+|-.|.||-.
T Consensus 651 Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred HHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 999999999999995 899999999964
No 350
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.4e-40 Score=273.29 Aligned_cols=250 Identities=27% Similarity=0.492 Sum_probs=209.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEec-CCceEEEEehhhhhH-------HHHHHHHHHHHHHHHHHh-CCCCcccceeeEEec
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVE-SKHPVALKIIFKEQI-------EKYKIQHQLRREMEIQSS-LRHPNILRLYGWFHD 90 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~-~~~~v~iK~~~~~~~-------~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~~~~ 90 (284)
.|++.+.||.|++|.||++.+.. +++.+++|.+..... ........+.+|+.++.+ ++|+|++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999887 678899998753211 122334556678877764 789999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 91 DERIFLILEYAHRGELYRELRK----HRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
++..++++||+++++|.+++.. ...++...++.++.|++.++.+||. .|++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999888743 3468999999999999999999996 6899999999999999999999999998
Q ss_pred ccccCCC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 166 SVQSRSK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 166 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
+...... .....++..|+|||.+.+..++.++|+||||++++++++|..||........................+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSE 240 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCH
Confidence 7543332 23345788899999999888999999999999999999999999888777777766665444333346889
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
++.+++.+||..||.+||++.++.++
T Consensus 241 ~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 241 DVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 99999999999999999999998764
No 351
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=281.37 Aligned_cols=260 Identities=32% Similarity=0.489 Sum_probs=230.0
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
..+..+.|+.=++||.||||.|+.++-..+|+-||.|.+.+.......-..-...|-+++.+++.+.||.+-..|+..+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 55677889999999999999999999999999999999988877776666777889999999999999999999999999
Q ss_pred EEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC-
Q 023270 94 IFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR- 170 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~- 170 (284)
+++|+..|+||+|.--|.+.+ .+++..++-++.+|+-||.+||+.+||++|+||+|||+|+.|+++|+|+|+++...
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999998888775 79999999999999999999999999999999999999999999999999996543
Q ss_pred -CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcCCCCCCCCCCCHHH
Q 023270 171 -SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK----DTFRRIMKVDLSFPSAPSISAEA 245 (284)
Q Consensus 171 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 245 (284)
.+.....||.+|+|||++.+..|+...|.|||||++|+|+.|..||...-.. ++-+..+... ...++.+|+++
T Consensus 340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~--~ey~~kFS~ea 417 (591)
T KOG0986|consen 340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP--EEYSDKFSEEA 417 (591)
T ss_pred CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch--hhcccccCHHH
Confidence 3334458999999999999999999999999999999999999999775443 3333333333 33346899999
Q ss_pred HHHHHHhcccCCCCCC-----CHHhhhcCcccccc
Q 023270 246 KHLISRLLVKDSSKRL-----SLQKIMEHPWIIKN 275 (284)
Q Consensus 246 ~~li~~~l~~~p~~Rp-----s~~~il~~~~~~~~ 275 (284)
+++.+.+|..||++|. .++++.+||||+..
T Consensus 418 kslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 418 KSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 9999999999999998 77899999999875
No 352
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=305.37 Aligned_cols=251 Identities=24% Similarity=0.414 Sum_probs=220.7
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCc-----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKH-----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
.+.-..-...+.||.|.||.||.+....... .|++|.+.... +.+....|.+|..+|+.++||||+++++++.
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 3556678889999999999999998765433 38888875433 3445678999999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEee
Q 023270 90 DDERIFLILEYAHRGELYRELRKH-------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGD 162 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d 162 (284)
+.+..+|++|||++|+|..+|++. ..|+..+++.++.|+++|+.||++.+++|+||..+|+|++....|||.|
T Consensus 766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcc
Confidence 999999999999999999999876 2589999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC-cc----ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCC
Q 023270 163 FGWSVQSRSKR-HT----MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFP 236 (284)
Q Consensus 163 ~~~~~~~~~~~-~~----~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (284)
||++++..... .. ..-+..|+|||.+..+.++.++||||||+++||++| |..||...+..+++...+.+. ..+
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~ 924 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLD 924 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccC
Confidence 99997432221 11 123568999999999999999999999999999998 999999999999999777776 777
Q ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 237 SAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+..+|..+.+++.+||..+|++||++..|++
T Consensus 925 ~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 925 PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 77799999999999999999999999999987
No 353
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.2e-41 Score=271.04 Aligned_cols=261 Identities=27% Similarity=0.507 Sum_probs=208.3
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec-C
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD-D 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~-~ 91 (284)
.+..|.+.+.||+|++|.||+|...+++. .||||.|..+...+ ..-...-+|+.+++.++|+|++.+..++.. +
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 35679999999999999999997665543 68999997663222 122345589999999999999999999877 7
Q ss_pred CeEEEEEeecCCCchHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC----CCEEEee
Q 023270 92 ERIFLILEYAHRGELYRELRKH-----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE----GRLKIGD 162 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~----~~~~l~d 162 (284)
..+++++||.+. +|+..|+-+ ..++...+.+++.||++|+.|||++=+.|+||||.|||+.-+ |.|||.|
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 899999999975 999988543 468999999999999999999999999999999999999888 8999999
Q ss_pred cccccccCCCCcc------ccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCCh---------HHHHH
Q 023270 163 FGWSVQSRSKRHT------MCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQ---------KDTFR 226 (284)
Q Consensus 163 ~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~---------~~~~~ 226 (284)
+|+++...++-.. -+.|.+|.|||.+.+.. ++++.|+|++||++.||+|-.+.|.+... .+.+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9998665544322 23578899999999877 89999999999999999999888865321 12222
Q ss_pred HHHhc--CCCCCCCC---------------------------------CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q 023270 227 RIMKV--DLSFPSAP---------------------------------SISAEAKHLISRLLVKDSSKRLSLQKIMEHPW 271 (284)
Q Consensus 227 ~~~~~--~~~~~~~~---------------------------------~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 271 (284)
++... ......++ .-++...+|+..||+.||.+|.|++|+|+|+|
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 22221 11111111 12445789999999999999999999999999
Q ss_pred ccccCCCC
Q 023270 272 IIKNANPR 279 (284)
Q Consensus 272 ~~~~~~~~ 279 (284)
|++-+.|.
T Consensus 340 F~~d~lpp 347 (438)
T KOG0666|consen 340 FTEDPLPP 347 (438)
T ss_pred cccCCCCC
Confidence 99997774
No 354
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=290.81 Aligned_cols=244 Identities=34% Similarity=0.569 Sum_probs=210.1
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHH-HhCCCCcccceeeEEecCCeEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQ-SSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~-~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
...+|.+...+|.|+|+.+-.+.+..+++.+++|++..+..+ ..+|+.++ ..-+|+|++++.+.+.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceee
Confidence 467789999999999999999999999999999999665222 22455333 3447999999999999999999
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEe-cCCCCEEEeecccccccCCCCc
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL-DHEGRLKIGDFGWSVQSRSKRH 174 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~-~~~~~~~l~d~~~~~~~~~~~~ 174 (284)
+|||.+.++-+.+.+...+... ..+..|+.+|+.|+.|||++|++|||++|+|||+ +..++++|+|||.+........
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 9999999998888887766545 7778899999999999999999999999999999 6889999999999866655545
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhc
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-DTFRRIMKVDLSFPSAPSISAEAKHLISRLL 253 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 253 (284)
..+.+..|.|||++....+++++|+||||+++|+|++|..||.....+ +++..+..+.+ ...+|+++++||++||
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~----s~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKF----SECVSDEAKDLLQQLL 547 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCcc----ccccCHHHHHHHHHhc
Confidence 556788899999999999999999999999999999999999877666 45544444322 2589999999999999
Q ss_pred ccCCCCCCCHHhhhcCccc
Q 023270 254 VKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 254 ~~~p~~Rps~~~il~~~~~ 272 (284)
+.||.+||++.+++.||||
T Consensus 548 ~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 548 QVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCChhhCcChhhhccCcch
Confidence 9999999999999999999
No 355
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-39 Score=275.26 Aligned_cols=251 Identities=21% Similarity=0.384 Sum_probs=207.4
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
.++-.+|++.+.||+|++|.||++.+..++. .+++|.+...... .....+.+|+.+++.++|+|++++++++..
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~ 80 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLS 80 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcC
Confidence 4567889999999999999999999877776 4688887543322 223467789999999999999999998865
Q ss_pred CCeEEEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+ ..++++||+++++|.+++.... .++...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 81 P-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred C-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 4 4679999999999999987754 6899999999999999999999999999999999999999999999999998543
Q ss_pred CCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 170 RSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 170 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
... .....++..|+|||.+.+..++.++||||||++++++++ |..||.+........ +.......+..+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD-LLEKGERLPQPPICTI 238 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHCCCCCCCCCCCCH
Confidence 221 112234568999999988889999999999999999997 899998776555443 3344444455556789
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.+.+++..|+..+|++||+++++++.
T Consensus 239 ~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 239 DVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999999999998875
No 356
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.2e-39 Score=271.56 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=191.7
Q ss_pred eeeccCCCeEEEEEEEecC------------------------CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc
Q 023270 25 RPLGKGKFGRVYLVREVES------------------------KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN 80 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~------------------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~ 80 (284)
.+||+|+||.||++....+ ...|++|++..... .....+.+++.+++.++|+|
T Consensus 1 ~~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 1 AHLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CCcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCC
Confidence 3699999999999875322 23488898854322 23456778889999999999
Q ss_pred ccceeeEEecCCeEEEEEeecCCCchHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC---
Q 023270 81 ILRLYGWFHDDERIFLILEYAHRGELYRELRK-HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG--- 156 (284)
Q Consensus 81 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~--- 156 (284)
|+++++++..+...++||||+++++|..++.. .+.++...+..++.|++.||.|||+.|++|+||+|+||+++..+
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999998876 45789999999999999999999999999999999999997644
Q ss_pred ----CEEEeecccccccCCCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHH-hCCCCCCCCChHHHHHHHHh
Q 023270 157 ----RLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFL-YGAPPFEAESQKDTFRRIMK 230 (284)
Q Consensus 157 ----~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~ 230 (284)
.++++|||.+...... ....++..|+|||.+.+ ..++.++|+||||+++++++ +|..||......+.......
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 236 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK 236 (274)
T ss_pred CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh
Confidence 4899999987433222 22346778999998865 55899999999999999985 79999987766554333222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 231 VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
.. ..+...++++.+++.+||..+|.+|||+++++++
T Consensus 237 -~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 237 -KH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred -cc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 11 2223456789999999999999999999999875
No 357
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.1e-39 Score=269.18 Aligned_cols=235 Identities=23% Similarity=0.372 Sum_probs=193.5
Q ss_pred eeeccCCCeEEEEEEEecCC----------ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 25 RPLGKGKFGRVYLVREVESK----------HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~----------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
+.||+|+||.||++.+..++ ..+++|.+...... ...+.+++.+++.++|+|++++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998776 34777876443321 4677889999999999999999999887 778
Q ss_pred EEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-------CEEEeecccc
Q 023270 95 FLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-------RLKIGDFGWS 166 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-------~~~l~d~~~~ 166 (284)
++|+||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||+++.++ .++|+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999998766 789999999999999999999999999999999999999887 7999999988
Q ss_pred cccCCCCccccCCCcccCccccCCC--CCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 167 VQSRSKRHTMCGTLDYLAPEMVENK--EHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
..... .....++..|+|||.+.+. .++.++|+||||++++++++ |..||...+..+........ ...+. ....
T Consensus 156 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~ 231 (259)
T cd05037 156 ITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPM--PDCA 231 (259)
T ss_pred ccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCC--CCch
Confidence 65443 2233456789999998876 68899999999999999998 68888776544443333322 11111 2347
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+++.+||..+|.+|||+.++++
T Consensus 232 ~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 232 ELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHH
Confidence 8999999999999999999999986
No 358
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.8e-40 Score=271.54 Aligned_cols=238 Identities=21% Similarity=0.340 Sum_probs=193.7
Q ss_pred eeeccCCCeEEEEEEEecCCc-------eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 25 RPLGKGKFGRVYLVREVESKH-------PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~-------~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+.||.|+||.||++.+...+. .+++|.+.... ....+.+.+++.+++.++|+|++++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999998865543 37788774332 23345677899999999999999999999999999999
Q ss_pred EeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC--------EEEeecccccc
Q 023270 98 LEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR--------LKIGDFGWSVQ 168 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~--------~~l~d~~~~~~ 168 (284)
|||+++++|..++...+ .++...++.++.|++.|+.|||+.|++|+||+|+||+++.++. ++++|||.+..
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 99999999999997754 5899999999999999999999999999999999999987764 69999998754
Q ss_pred cCCCCccccCCCcccCccccCCC-CCCchhhHhhHHHHHHHHHhC-CCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 169 SRSKRHTMCGTLDYLAPEMVENK-EHDYAVDNWTLGILCYEFLYG-APPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
... .....++..|+|||.+.+. .++.++|+||||+++|++++| ..|+...+........ ... ...+...+.++.
T Consensus 158 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 233 (258)
T cd05078 158 VLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDR--HQLPAPKWTELA 233 (258)
T ss_pred cCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-Hcc--ccCCCCCcHHHH
Confidence 432 2234567889999998764 478999999999999999998 5676665555443322 222 223335678999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcC
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+||+.+|.+|||++++++.
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHh
Confidence 99999999999999999999864
No 359
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.2e-39 Score=270.67 Aligned_cols=241 Identities=25% Similarity=0.422 Sum_probs=200.2
Q ss_pred eeeccCCCeEEEEEEEecCC------ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 25 RPLGKGKFGRVYLVREVESK------HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~------~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+.||+|++|.||++.+.... ..+++|.+..... ......+.+|+..++.++|+||+++++++...+..++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 46899999999999876433 6789998754321 122456778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-----CEEEeecccc
Q 023270 99 EYAHRGELYRELRKH-------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-----RLKIGDFGWS 166 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-----~~~l~d~~~~ 166 (284)
||+++++|.+++... ..++...++.++.|++.+|.|||+.|++|+||+|+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999998653 2478899999999999999999999999999999999999887 8999999987
Q ss_pred cccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 023270 167 VQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPS 240 (284)
Q Consensus 167 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
...... .....++..|+|||.+.+..++.++||||||+++++|++ |..||...+..+....+... .....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 237 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GRLQKPEN 237 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-CccCCccc
Confidence 433221 112234678999999999999999999999999999998 99999887776665554433 23344457
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
+|..+.+++.+||..+|.+||++.++++
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 238 CPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred chHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 8899999999999999999999999875
No 360
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.8e-39 Score=267.62 Aligned_cols=238 Identities=22% Similarity=0.345 Sum_probs=192.0
Q ss_pred eeeccCCCeEEEEEEEecC------------CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC
Q 023270 25 RPLGKGKFGRVYLVREVES------------KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE 92 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~------------~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~ 92 (284)
+.||.|+||.||++..... ...+++|++.... ......+.+++.+++.++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 3689999999999975322 2358889875432 233456778899999999999999999999999
Q ss_pred eEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC-------EEEeecc
Q 023270 93 RIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR-------LKIGDFG 164 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~-------~~l~d~~ 164 (284)
..++++||+++++|..++... ..++...++.++.|++.|+.|||+.|++|+||+|+||+++.++. ++++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999999888764 56899999999999999999999999999999999999987664 8999999
Q ss_pred cccccCCCCccccCCCcccCccccC-CCCCCchhhHhhHHHHHHHHH-hCCCCCCCCChHHHHHHHHhcCCCCCCCCCCC
Q 023270 165 WSVQSRSKRHTMCGTLDYLAPEMVE-NKEHDYAVDNWTLGILCYEFL-YGAPPFEAESQKDTFRRIMKVDLSFPSAPSIS 242 (284)
Q Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
++...... ....++..|+|||.+. +..++.++||||||+++|+++ +|..||......+... ...... ......+
T Consensus 158 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~--~~~~~~~ 233 (262)
T cd05077 158 IPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQC--MLVTPSC 233 (262)
T ss_pred CCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCc--cCCCCCh
Confidence 87543322 2334678899999886 456889999999999999997 5888887765544332 222222 2223457
Q ss_pred HHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 243 AEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+++.+|+.+||+.||.+||++.+|+++
T Consensus 234 ~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 234 KELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 889999999999999999999999875
No 361
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.4e-39 Score=268.00 Aligned_cols=242 Identities=23% Similarity=0.378 Sum_probs=193.5
Q ss_pred eeeccCCCeEEEEEEEec--CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKGKFGRVYLVREVE--SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
+.||.|+||.||++.... ....+++|.+..... ......+.+|+..++.++|+||+++++.+...+..++||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT--PDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC--hHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 468999999999996533 345688888754322 2234567789999999999999999999999999999999999
Q ss_pred CCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-----C
Q 023270 103 RGELYRELRKHR-----RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS-----K 172 (284)
Q Consensus 103 ~~~L~~~l~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~-----~ 172 (284)
+++|.+++.... ..+...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++..... .
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999999997653 246778889999999999999999999999999999999999999999998743211 1
Q ss_pred CccccCCCcccCccccC-------CCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCC-CC---CCCCC
Q 023270 173 RHTMCGTLDYLAPEMVE-------NKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDL-SF---PSAPS 240 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~-~~---~~~~~ 240 (284)
.....++..|+|||++. ....+.++||||||+++++|++ |..||......+.......... .. .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLK 238 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccccc
Confidence 12234567799999874 2346789999999999999998 8899988877766666544322 11 12236
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
++..+.+++..|+ .||++|||++++++.
T Consensus 239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 239 YSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred CCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 7888999999998 599999999999864
No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4.3e-39 Score=266.29 Aligned_cols=242 Identities=21% Similarity=0.364 Sum_probs=197.1
Q ss_pred eeeccCCCeEEEEEEEec---CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe-cCCeEEEEEee
Q 023270 25 RPLGKGKFGRVYLVREVE---SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH-DDERIFLILEY 100 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~-~~~~~~~v~e~ 100 (284)
+.||+|+||.||++.+.. ....+++|.+.... .....+.+.+|+.+++.++|+|++++++++. .++..++++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999998654 34569999875322 1223457778999999999999999999765 45568999999
Q ss_pred cCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-------
Q 023270 101 AHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK------- 172 (284)
Q Consensus 101 ~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~------- 172 (284)
+.+++|.+++... ..++...+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 9999999999764 35678888999999999999999999999999999999999999999999987533211
Q ss_pred CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Q 023270 173 RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISR 251 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (284)
.....++..|+|||.+.+..++.++||||||+++++|++ |.+||...+..+.......+. .......+++.+.+++.+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~ 237 (262)
T cd05058 159 HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-RLLQPEYCPDPLYEVMLS 237 (262)
T ss_pred cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHH
Confidence 112234668999999988889999999999999999999 567788777777666665543 233334678999999999
Q ss_pred hcccCCCCCCCHHhhhcC
Q 023270 252 LLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 252 ~l~~~p~~Rps~~~il~~ 269 (284)
||..+|++||++.+++..
T Consensus 238 cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 238 CWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HcCCChhhCCCHHHHHHH
Confidence 999999999999999864
No 363
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-42 Score=264.87 Aligned_cols=271 Identities=25% Similarity=0.418 Sum_probs=219.2
Q ss_pred HhhhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeE
Q 023270 8 REDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGW 87 (284)
Q Consensus 8 ~~~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~ 87 (284)
.+...+.-...+.|.-..+||+|.||.||+|+..++++.|++|++..+. ..........+|++++..++|+|++.++++
T Consensus 6 ~s~~~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEi 84 (376)
T KOG0669|consen 6 DSMYEPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEI 84 (376)
T ss_pred hcccCCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHH
Confidence 3444555566778999999999999999999999999999988875432 122233455689999999999999999998
Q ss_pred Eec--------CCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCE
Q 023270 88 FHD--------DERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 88 ~~~--------~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~ 158 (284)
|.. ...+|+|+.+|+. +|.-++.+. ..++..++..++.++++||.|+|+..|+|+|+|+.|++++.+|.+
T Consensus 85 c~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 85 CRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGIL 163 (376)
T ss_pred HhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceE
Confidence 753 2368999999985 888888776 579999999999999999999999999999999999999999999
Q ss_pred EEeecccccccC-------CCCccccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q 023270 159 KIGDFGWSVQSR-------SKRHTMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK 230 (284)
Q Consensus 159 ~l~d~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~ 230 (284)
+|.|||++.... +.......+.+|++||.+.+.. +++..|||+.||+|.+|+|+.+.+.+++....+..+..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 999999973221 1112234588999999988764 89999999999999999999999999888776665443
Q ss_pred --cCCCCCCCCC-------------------------------CCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 231 --VDLSFPSAPS-------------------------------ISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 231 --~~~~~~~~~~-------------------------------~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+......+|. -.++..+|+..+|..||.+|+.+.++|+|.||-+-+.
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 2112111111 1347789999999999999999999999999999887
Q ss_pred CCC
Q 023270 278 PRG 280 (284)
Q Consensus 278 ~~~ 280 (284)
|-+
T Consensus 324 pqa 326 (376)
T KOG0669|consen 324 PQA 326 (376)
T ss_pred chh
Confidence 743
No 364
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=5.1e-39 Score=261.99 Aligned_cols=240 Identities=43% Similarity=0.786 Sum_probs=206.5
Q ss_pred CCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCchHHHH
Q 023270 31 KFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYREL 110 (284)
Q Consensus 31 ~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l 110 (284)
++|.||++....+++.+++|++........ .+.+.+|++.++.++|++++++++.+......++++|++++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999998999999999866543321 568889999999999999999999999999999999999988999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC--CCccccCCCcccCcccc
Q 023270 111 RKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS--KRHTMCGTLDYLAPEMV 188 (284)
Q Consensus 111 ~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~y~aPE~~ 188 (284)
.....++...++.++.+++.++.+||+.|++|+||+|+||+++.++.++|+|||.+..... ......++..|+|||.+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~ 158 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVL 158 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHH
Confidence 8876689999999999999999999999999999999999999999999999999855443 23445578889999999
Q ss_pred CCCCCCchhhHhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHhh
Q 023270 189 ENKEHDYAVDNWTLGILCYEFLYGAPPFEA-ESQKDTFRRIMKVDLSFPSAPS-ISAEAKHLISRLLVKDSSKRLSLQKI 266 (284)
Q Consensus 189 ~~~~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~~p~~Rps~~~i 266 (284)
.+..++.++|+|++|++++++++|..||.. ...................... ++.++.+++.+|+..+|.+||++.++
T Consensus 159 ~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 238 (244)
T smart00220 159 LGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA 238 (244)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence 888899999999999999999999999988 4444444444443333322222 88999999999999999999999999
Q ss_pred hcCccc
Q 023270 267 MEHPWI 272 (284)
Q Consensus 267 l~~~~~ 272 (284)
++||||
T Consensus 239 ~~~~~~ 244 (244)
T smart00220 239 LQHPFF 244 (244)
T ss_pred hhCCCC
Confidence 999997
No 365
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.9e-39 Score=265.26 Aligned_cols=241 Identities=23% Similarity=0.369 Sum_probs=191.6
Q ss_pred eeeccCCCeEEEEEEEec--CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKGKFGRVYLVREVE--SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
+.||+|+||.||++.... ++..+++|.+...... .....+.+|+..++.++|+|++++++.+.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 468999999999997543 4567999988654322 223467889999999999999999999999999999999999
Q ss_pred CCchHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC-----
Q 023270 103 RGELYRELRKHR-----RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK----- 172 (284)
Q Consensus 103 ~~~L~~~l~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~----- 172 (284)
+++|.+++.... .++...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999999987532 3567788899999999999999999999999999999999999999999987543221
Q ss_pred CccccCCCcccCccccCCC-------CCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcC-CCCCC---CCC
Q 023270 173 RHTMCGTLDYLAPEMVENK-------EHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVD-LSFPS---APS 240 (284)
Q Consensus 173 ~~~~~~~~~y~aPE~~~~~-------~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~-~~~~~---~~~ 240 (284)
.....++..|+|||++.+. .++.++|+||||++++++++ |..||......+......... ...+. ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLP 238 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCC
Confidence 1223456789999988542 35789999999999999996 999998776665544333221 11111 124
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.++.+.+++++|+ .+|.+|||+++|+.
T Consensus 239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 239 LSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 6788999999998 68999999999975
No 366
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=272.59 Aligned_cols=256 Identities=25% Similarity=0.436 Sum_probs=210.7
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC--C----cccceeeEEe
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH--P----NILRLYGWFH 89 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h--~----~i~~~~~~~~ 89 (284)
+--++|.+++.+|+|.||.|..+.+..++..||+|++..-. . ..+..+-|++++.++.+ | -++.+.++|.
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--k--YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--K--YREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--H--HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 44678999999999999999999999999999999985432 2 23455568888888842 2 3677778899
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-------------
Q 023270 90 DDERIFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH------------- 154 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~------------- 154 (284)
-.++.|+|+|.++ .|+.+++..+. +++...++.+..|+++++++||+.+++|.||||+||++..
T Consensus 162 yrghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 162 YRGHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred ccCceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 9999999999984 59999998874 7899999999999999999999999999999999999943
Q ss_pred -------CCCEEEeecccccccCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHH---H
Q 023270 155 -------EGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKD---T 224 (284)
Q Consensus 155 -------~~~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~---~ 224 (284)
+..++++|||.++.........+.|--|.|||++.+-.++..+||||+||||+||+||...|...++.+ .
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaM 320 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAM 320 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHH
Confidence 235999999999888877777788899999999999999999999999999999999999998877665 3
Q ss_pred HHHHHhcC------------------CCCCCC-----------------------CCCCHHHHHHHHHhcccCCCCCCCH
Q 023270 225 FRRIMKVD------------------LSFPSA-----------------------PSISAEAKHLISRLLVKDSSKRLSL 263 (284)
Q Consensus 225 ~~~~~~~~------------------~~~~~~-----------------------~~~~~~l~~li~~~l~~~p~~Rps~ 263 (284)
++.++... +.++.. +....++.+|++.||..||.+|+|+
T Consensus 321 MerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl 400 (415)
T KOG0671|consen 321 MERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITL 400 (415)
T ss_pred HHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccH
Confidence 33332210 000000 0112358899999999999999999
Q ss_pred HhhhcCccccccC
Q 023270 264 QKIMEHPWIIKNA 276 (284)
Q Consensus 264 ~~il~~~~~~~~~ 276 (284)
.++|.||||....
T Consensus 401 ~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 401 REALSHPFFARLT 413 (415)
T ss_pred HHHhcCHHhhcCC
Confidence 9999999998764
No 367
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=267.92 Aligned_cols=252 Identities=17% Similarity=0.198 Sum_probs=192.1
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecC---CceEEEEehhhhhHHH--H------HHHHHHHHHHHHHHhCCCCcc
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVES---KHPVALKIIFKEQIEK--Y------KIQHQLRREMEIQSSLRHPNI 81 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~---~~~v~iK~~~~~~~~~--~------~~~~~~~~~~~~~~~l~h~~i 81 (284)
...+...+|++.+.||+|+||+||+|....+ +..+++|+........ . ........+...+..+.|+++
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 3445667999999999999999999998777 6677777643221110 0 001112233445566789999
Q ss_pred cceeeEEecCC----eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC
Q 023270 82 LRLYGWFHDDE----RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR 157 (284)
Q Consensus 82 ~~~~~~~~~~~----~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~ 157 (284)
+++++.+.... ..+++++++. .++.+.+......+...++.++.|++.|+.|||+.|++|+||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc
Confidence 99998765443 4577888875 477777766656788889999999999999999999999999999999999999
Q ss_pred EEEeecccccccC----------CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh-HH---
Q 023270 158 LKIGDFGWSVQSR----------SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ-KD--- 223 (284)
Q Consensus 158 ~~l~d~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~--- 223 (284)
++|+|||++.... .......|++.|+|||++.+..++.++||||||+++++|++|..||..... ..
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999999974332 111224588999999999999999999999999999999999999987632 22
Q ss_pred -----HHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 224 -----TFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 224 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+..+..+.. ..+..++++.++++.|+..+|++||+++++++
T Consensus 245 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 2222222222 22356899999999999999999999999875
No 368
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.3e-38 Score=265.04 Aligned_cols=247 Identities=22% Similarity=0.379 Sum_probs=202.1
Q ss_pred cEeeeeeccCCCeEEEEEEEec---CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-----
Q 023270 21 FEIGRPLGKGKFGRVYLVREVE---SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE----- 92 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~----- 92 (284)
|.+.+.||+|++|.||+|.+.. ++..|++|++........ ..+.+.+|++.++.++|+|++++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSS-DIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChH-HHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 6788999999999999998654 467899999865433332 3456778999999999999999999876432
Q ss_pred -eEEEEEeecCCCchHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccc
Q 023270 93 -RIFLILEYAHRGELYRELRKH------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 93 -~~~~v~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
..+++++|+.+++|..++... ..++...++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 247889999999998877432 1478899999999999999999999999999999999999999999999998
Q ss_pred ccccCCC-----CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCC
Q 023270 166 SVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAP 239 (284)
Q Consensus 166 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
+...... .....+++.|++||.+.+..++.++||||||++++++++ |..||...+..+......... .....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~ 238 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RLKQPP 238 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cCCCCC
Confidence 7543221 112234567999999988889999999999999999998 899998887776666555443 233334
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 240 SISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
..+..+.+++.+||..+|.+|||+.+++..
T Consensus 239 ~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 239 DCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 678999999999999999999999999864
No 369
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.2e-38 Score=262.12 Aligned_cols=241 Identities=22% Similarity=0.357 Sum_probs=192.1
Q ss_pred eeeccCCCeEEEEEEEecCC--ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKGKFGRVYLVREVESK--HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
+.||+|+||.||++....++ ..+++|.+..... ....+.+.+++..++.++|+|++++++.+......++||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 46999999999999754433 3466777654322 2234678888999999999999999999999999999999999
Q ss_pred CCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC-----CCC
Q 023270 103 RGELYRELRKH----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR-----SKR 173 (284)
Q Consensus 103 ~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~-----~~~ 173 (284)
+++|.+++.+. ...+...++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.... ...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999999764 235677788999999999999999999999999999999999999999999874321 112
Q ss_pred ccccCCCcccCccccCC-------CCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCC----CCCCCCC
Q 023270 174 HTMCGTLDYLAPEMVEN-------KEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLS----FPSAPSI 241 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~-------~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~ 241 (284)
....++..|+|||++.. ...+.++||||||+++++|++ +..||...+..+.+......... ......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY 238 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence 23456788999998743 235789999999999999996 67889887777776665543221 2223357
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
++.+.+++..|+ .+|.+||+++++++
T Consensus 239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 239 SERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred cHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 889999999999 68999999999975
No 370
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-39 Score=298.17 Aligned_cols=250 Identities=30% Similarity=0.515 Sum_probs=203.2
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec-------
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD------- 90 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~------- 90 (284)
..+|..++.||+||||.||+|+++-+|..||||++.... +......+.+|+..+.+++|||+++++..+.+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 457899999999999999999999999999999997765 33445788899999999999999998754310
Q ss_pred --------------------------------------------------------------------------------
Q 023270 91 -------------------------------------------------------------------------------- 90 (284)
Q Consensus 91 -------------------------------------------------------------------------------- 90 (284)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CeEEEEEeecCCCchHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHh
Q 023270 91 ------------------------D--------ERIFLILEYAHRGELYRELRKHRRF-TEQQAATYIASLTNALAYCHE 137 (284)
Q Consensus 91 ------------------------~--------~~~~~v~e~~~~~~L~~~l~~~~~l-~~~~~~~i~~~i~~~l~~lh~ 137 (284)
+ -.+||-||||+..++.+++..+... ....+++++++|++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 1278999999987777777766543 578899999999999999999
Q ss_pred CCccccCCCCCCeEecCCCCEEEeecccccccC--------------C-------CCccccCCCcccCccccCCCC---C
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--------------S-------KRHTMCGTLDYLAPEMVENKE---H 193 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~--------------~-------~~~~~~~~~~y~aPE~~~~~~---~ 193 (284)
.|++|+||||.||++++++.|||+|||+++... . ......||.-|.|||++.+.. +
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 999999999999999999999999999985410 0 112345788899999997655 8
Q ss_pred CchhhHhhHHHHHHHHHhCCCCCC-CCChHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 194 DYAVDNWTLGILCYEFLYGAPPFE-AESQKDTFRRIMKVDLSFP---SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 194 ~~~~Di~slG~il~~l~tg~~p~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+.|.|+||||++++||+. ||. .+..-..+..+.++.++.+ .. .--+.-..+|+.|++.||.+||||.|+|.+
T Consensus 796 n~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~-~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFD-PEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred cchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCccccc-ccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 999999999999999984 354 3445566666776666555 22 223456789999999999999999999999
Q ss_pred cccc
Q 023270 270 PWII 273 (284)
Q Consensus 270 ~~~~ 273 (284)
.||.
T Consensus 872 ~llp 875 (1351)
T KOG1035|consen 872 ELLP 875 (1351)
T ss_pred cCCC
Confidence 9997
No 371
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-40 Score=269.88 Aligned_cols=261 Identities=33% Similarity=0.588 Sum_probs=229.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDE 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~ 92 (284)
-.++..+|..+.+||.|+||.|-++..+++.+.||||++.+.-+......+--..|-+++... +-|.+++++..|..-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 367889999999999999999999999999999999999776554433333334455555544 3578888999999899
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc---c
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ---S 169 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~---~ 169 (284)
.+|+||||+.||+|-..+++-+.+.+..+.-++..|+.||-+||++||+++||+.+|||++.+|++||.|||+... .
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~ 503 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD 503 (683)
T ss_pred heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999843 2
Q ss_pred CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 170 RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
...+...+|+|.|+|||++..++|....|.||+|+++|+|+.|.+||.+.+.+++.+.+..-...++. .+|.+..++.
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK--slSkEAv~ic 581 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK--SLSKEAVAIC 581 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc--cccHHHHHHH
Confidence 34445678999999999999999999999999999999999999999999999999999987766665 7999999999
Q ss_pred HHhcccCCCCCCCH-----HhhhcCccccccC
Q 023270 250 SRLLVKDSSKRLSL-----QKIMEHPWIIKNA 276 (284)
Q Consensus 250 ~~~l~~~p~~Rps~-----~~il~~~~~~~~~ 276 (284)
...|...|.+|.-+ .+|-+||||+.-+
T Consensus 582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 582 KGLLTKHPGKRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred HHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence 99999999999843 6899999998753
No 372
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=283.62 Aligned_cols=254 Identities=25% Similarity=0.406 Sum_probs=227.2
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCCce---EEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESKHP---VALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~---v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
.+++..+.-.|.++||.|.||.|+++..+..+++ ||||.++... ++.....|..|+.+|-+.+||||+++-++..
T Consensus 623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 4678889999999999999999999998877654 9999996654 3345688999999999999999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
...-.-||+|||+.|+|..+|+.+ +.++..++.-+++.|+.|++||.+.|+||+||..+|||++.+=..|++|||+++.
T Consensus 701 ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 701 KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceee
Confidence 999999999999999999999876 5799999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCc----ccc--CCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCC
Q 023270 169 SRSKRH----TMC--GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSI 241 (284)
Q Consensus 169 ~~~~~~----~~~--~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
..+... ... -+.+|.|||.+....++.+|||||+|++|||.++ |..||...+..+.+..+.++ +..+.+.++
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDC 859 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDC 859 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCC
Confidence 432221 111 2468999999999999999999999999999875 99999999999999999887 467777799
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
|..+.+|+..||++|-.+||.++||+.+
T Consensus 860 P~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 860 PAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred cHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999999999999999875
No 373
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=266.43 Aligned_cols=256 Identities=31% Similarity=0.563 Sum_probs=216.9
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHH----HHHHHHHHHHHHHHHhCCCCcccceeeEEe-cCCe
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEK----YKIQHQLRREMEIQSSLRHPNILRLYGWFH-DDER 93 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~-~~~~ 93 (284)
.+|.++..||.|||+.||+|.+......||+|+-.....+. ....+..-+|.++-+.++|+.||++++++. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 46999999999999999999999999999999975444333 233466778999999999999999999996 4467
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeEecC---CCCEEEeecccccc
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENH--VIHRDIKPENLLLDH---EGRLKIGDFGWSVQ 168 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~g--i~H~dl~p~nil~~~---~~~~~l~d~~~~~~ 168 (284)
+|-|.|||+|.+|.-+++.++.+++++++.|+.||+.||.||.+.. |+|-||+|.|||+.. -|.+||.|||++..
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 8999999999999999999999999999999999999999999875 999999999999954 36899999999865
Q ss_pred cCCCC----------ccccCCCcccCccccC----CCCCCchhhHhhHHHHHHHHHhCCCCCCCCChH-HHHHH---HHh
Q 023270 169 SRSKR----------HTMCGTLDYLAPEMVE----NKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK-DTFRR---IMK 230 (284)
Q Consensus 169 ~~~~~----------~~~~~~~~y~aPE~~~----~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~-~~~~~---~~~ 230 (284)
+.... ....|+.+|+|||++- .+.++.+.||||+|+++|..+.|+.||...... +++.. +..
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 54322 3356899999999884 344788999999999999999999999765443 33322 223
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 231 VDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
....++..+.++.+...||++||.+--++|....++-.||||.-
T Consensus 703 tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 703 TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 45567777899999999999999999999999999999999974
No 374
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.1e-37 Score=279.46 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=177.4
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecC----CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeE-
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVES----KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGW- 87 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~- 87 (284)
...+...+|.+.+.||+|+||.||+|.+..+ +..|++|++........ .... .+....+.++..+...
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~----~~~e---~l~~~~~~~~~~~~~~~ 198 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEI----WMNE---RVRRACPNSCADFVYGF 198 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHH----HHHH---HHHhhchhhHHHHHHhh
Confidence 4567889999999999999999999999888 89999998754321111 1111 1111112222221111
Q ss_pred -----EecCCeEEEEEeecCCCchHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCccc
Q 023270 88 -----FHDDERIFLILEYAHRGELYRELRKHRR--------------------FTEQQAATYIASLTNALAYCHENHVIH 142 (284)
Q Consensus 88 -----~~~~~~~~~v~e~~~~~~L~~~l~~~~~--------------------l~~~~~~~i~~~i~~~l~~lh~~gi~H 142 (284)
...+...++|+||+++++|.+++..... .....+..++.|++.||.|||+.||+|
T Consensus 199 ~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiH 278 (566)
T PLN03225 199 LEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVH 278 (566)
T ss_pred hcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 2456689999999999999998865321 123446679999999999999999999
Q ss_pred cCCCCCCeEecC-CCCEEEeecccccccCC----CCccccCCCcccCccccCCCC----------------------CCc
Q 023270 143 RDIKPENLLLDH-EGRLKIGDFGWSVQSRS----KRHTMCGTLDYLAPEMVENKE----------------------HDY 195 (284)
Q Consensus 143 ~dl~p~nil~~~-~~~~~l~d~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~----------------------~~~ 195 (284)
+||||+|||++. ++.+||+|||++..... ......+++.|+|||.+.... ++.
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~ 358 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD 358 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence 999999999986 57999999999854321 223456789999999653221 334
Q ss_pred hhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCC----------C---------CCCCCCCCHHHHHHHHHhccc
Q 023270 196 AVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK-VDL----------S---------FPSAPSISAEAKHLISRLLVK 255 (284)
Q Consensus 196 ~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~----------~---------~~~~~~~~~~l~~li~~~l~~ 255 (284)
++||||+||++++|+++..++.. .......... ... . +...+..+....+||.+||+.
T Consensus 359 k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 359 RFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 56999999999999987665432 1111111111 000 0 000111233466899999999
Q ss_pred CCCCCCCHHhhhcCccccccC
Q 023270 256 DSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 256 ~p~~Rps~~~il~~~~~~~~~ 276 (284)
||++|||+.++|+||||++..
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCC
Confidence 999999999999999998764
No 375
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-38 Score=269.71 Aligned_cols=268 Identities=30% Similarity=0.545 Sum_probs=231.6
Q ss_pred HHhhhhcccccccC--cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccce
Q 023270 7 EREDNRKREWSLQD--FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRL 84 (284)
Q Consensus 7 ~~~~~~~~~~~~~~--y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~ 84 (284)
|+-..+-.+-++.+ |..++.||-|+||.|.++....+.+.||.|.+.+.+.-........+.|-.+|..-+++-+|++
T Consensus 615 ESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrL 694 (1034)
T KOG0608|consen 615 ESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRL 694 (1034)
T ss_pred hhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEE
Confidence 34444444555544 8888999999999999999988999999999999888888888899999999999999999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecc
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG 164 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~ 164 (284)
+..|.+.+.+|+||+|.+||++-++|-+-+-+.++.++-++..+.-|++++|+.|++|+||||+|||+|.+|++||.|||
T Consensus 695 yySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 695 YYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred EEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecc
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred ccccc---------CCCC------------------------------------ccccCCCcccCccccCCCCCCchhhH
Q 023270 165 WSVQS---------RSKR------------------------------------HTMCGTLDYLAPEMVENKEHDYAVDN 199 (284)
Q Consensus 165 ~~~~~---------~~~~------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (284)
+++-. ++.. ...+|++.|+|||++....++..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 86211 0000 12468899999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCCCCChHHHHHHHH--hcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCccccc
Q 023270 200 WTLGILCYEFLYGAPPFEAESQKDTFRRIM--KVDLSFPSAPSISAEAKHLISRLLVKDSSKRL---SLQKIMEHPWIIK 274 (284)
Q Consensus 200 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~~ 274 (284)
||.|++|++|+.|.+||...++.+...++. ...+.++....++++..++|.++.+ ++..|. -++++..||||+.
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccc
Confidence 999999999999999999888877655543 3456666777899999999998774 777887 5778999999985
Q ss_pred c
Q 023270 275 N 275 (284)
Q Consensus 275 ~ 275 (284)
-
T Consensus 934 I 934 (1034)
T KOG0608|consen 934 I 934 (1034)
T ss_pred c
Confidence 4
No 376
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=274.18 Aligned_cols=257 Identities=23% Similarity=0.383 Sum_probs=223.2
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCc---eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKH---PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIF 95 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~---~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~ 95 (284)
.+..+.++||+|.||.|+++.++..+. .||||.+....... ....|.+|+..|.+|+|+|++++|+++.+ ...-
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 345667889999999999999876443 48999986655443 56889999999999999999999999987 6688
Q ss_pred EEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC
Q 023270 96 LILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 173 (284)
+|+|.++.|||.+.|... ..|-...+-.++.||+.|+.||..++.+|+||..+|+++-....|||+|||+......+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 999999999999999874 468888899999999999999999999999999999999999999999999986655444
Q ss_pred ccc------cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHH
Q 023270 174 HTM------CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAK 246 (284)
Q Consensus 174 ~~~------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (284)
..+ ..+..|+|||.++...++.+||+|++|+++|||+| |..||.+.....+++.+- .....+.+..++.++.
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csedIY 345 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSEDIY 345 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHHHH
Confidence 332 24567999999999999999999999999999997 999999999999888887 4456777778999999
Q ss_pred HHHHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 247 HLISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
+++..||..+|.+|||+..|.+.-+.++.+.-.
T Consensus 346 ~imk~cWah~paDRptFsair~~~~l~eaqp~~ 378 (1039)
T KOG0199|consen 346 QIMKNCWAHNPADRPTFSAIREDLVLAEAQPAV 378 (1039)
T ss_pred HHHHHhccCCccccccHHHHHHhHHHHhcCCce
Confidence 999999999999999999998887777766543
No 377
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-36 Score=268.23 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=191.9
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEe----------------cCCceEEEEehhhhhHHHH-----------HHHHH
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREV----------------ESKHPVALKIIFKEQIEKY-----------KIQHQ 65 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~----------------~~~~~v~iK~~~~~~~~~~-----------~~~~~ 65 (284)
...|+.++|++.++||+|+||+||++... ..+..|+||.+........ ...+.
T Consensus 139 ~~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~ 218 (507)
T PLN03224 139 NSRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAET 218 (507)
T ss_pred CCCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccch
Confidence 45688999999999999999999998642 2346799999854321110 01122
Q ss_pred HHHHHHHHHhCCCCc-----ccceeeEEec--------CCeEEEEEeecCCCchHHHHHhc-------------------
Q 023270 66 LRREMEIQSSLRHPN-----ILRLYGWFHD--------DERIFLILEYAHRGELYRELRKH------------------- 113 (284)
Q Consensus 66 ~~~~~~~~~~l~h~~-----i~~~~~~~~~--------~~~~~~v~e~~~~~~L~~~l~~~------------------- 113 (284)
...|+..+..++|.+ ++++++++.. .+..++|+||+++++|.+++...
T Consensus 219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~ 298 (507)
T PLN03224 219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP 298 (507)
T ss_pred hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence 334556666666554 3566776643 35689999999999999888642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC--c--cccCCCcccC
Q 023270 114 -----RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--H--TMCGTLDYLA 184 (284)
Q Consensus 114 -----~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~--~--~~~~~~~y~a 184 (284)
..++...++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++....... . ...+++.|+|
T Consensus 299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 123567788999999999999999999999999999999999999999999985432211 1 1234789999
Q ss_pred ccccCCCCC----------------------CchhhHhhHHHHHHHHHhCCC-CCCCC-----------ChHHHHHHHHh
Q 023270 185 PEMVENKEH----------------------DYAVDNWTLGILCYEFLYGAP-PFEAE-----------SQKDTFRRIMK 230 (284)
Q Consensus 185 PE~~~~~~~----------------------~~~~Di~slG~il~~l~tg~~-p~~~~-----------~~~~~~~~~~~ 230 (284)
||.+..... ....|+||+|+++++|++|.. |+... .....++....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 998754321 124699999999999999875 66432 11122233333
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhcccCC---CCCCCHHhhhcCccccc
Q 023270 231 VDLSFPSAPSISAEAKHLISRLLVKDS---SKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p---~~Rps~~~il~~~~~~~ 274 (284)
....++..+..++..++|+.+||..+| ++|+|++|+|+||||..
T Consensus 459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 445555566789999999999999765 78999999999999964
No 378
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=258.88 Aligned_cols=133 Identities=24% Similarity=0.434 Sum_probs=115.4
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC--------CCcccceeeE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR--------HPNILRLYGW 87 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~--------h~~i~~~~~~ 87 (284)
++..+|.+.++||.|-|++||+|-|..+.+.||+|+++....-+ +....||.+++++. -.+|+++++.
T Consensus 75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYt----EaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYT----EAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHH----HHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 44579999999999999999999999999999999997766544 45668888888874 2479999999
Q ss_pred Ee----cCCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEec
Q 023270 88 FH----DDERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLD 153 (284)
Q Consensus 88 ~~----~~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~ 153 (284)
|. .+.++|+|+|+.. ..|..+|... +.++...++.|++|++.||.|||+. ||+|.||||+|||+.
T Consensus 151 FkhsGpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 151 FKHSGPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred ceecCCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 85 4458999999994 6888888765 5799999999999999999999975 999999999999995
No 379
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-38 Score=268.58 Aligned_cols=251 Identities=25% Similarity=0.414 Sum_probs=211.7
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecC--Cc--eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVES--KH--PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~--~~--~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
.++.-..-...+.||.|-||.||.+....- |. -||||+.+..... ...+.|..|..+++.++||||++++|++.
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 334444445567799999999999987543 22 3889988664322 23578899999999999999999999886
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKHR-RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+...++|||.++.|.|.++++.++ .|+...+..+..||..|+.|||+...+|+||..+|||+..+..|||+|||+++.
T Consensus 462 -e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 462 -EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred -ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence 456899999999999999999885 799999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCc----cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCH
Q 023270 169 SRSKRH----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISA 243 (284)
Q Consensus 169 ~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
...... ...-+..|+|||.++-..++.+||||.||++|||++. |..||.+-...+.+-.+..+ ...+.++.+|+
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-eRlP~P~nCPp 619 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-ERLPCPPNCPP 619 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC-CCCCCCCCCCh
Confidence 543321 2223567999999998999999999999999999875 99999998888887777766 47778889999
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
.+..|+++||+.+|.+||.+.+|..
T Consensus 620 ~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 620 ALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHHHHHHhccCcccCCcHHHHHH
Confidence 9999999999999999998877653
No 380
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=266.03 Aligned_cols=249 Identities=21% Similarity=0.367 Sum_probs=217.1
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
+..-.+-...++||.|.||.||.+.++...-.||||.++-... ...+|.+|..+|+.++|+|+++++++|..+--+
T Consensus 263 EmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 263 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred hccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3334456778899999999999999999888999999854332 246888999999999999999999999999999
Q ss_pred EEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 95 FLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
|||+|||..|.|.++++++. .++.-.++.++.||..|+.||..++++|+||..+|+|+..+..||+.|||++..+.+.
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999999999999998764 4677788899999999999999999999999999999999999999999999776554
Q ss_pred Cccc----cCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Q 023270 173 RHTM----CGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKH 247 (284)
Q Consensus 173 ~~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (284)
.... .-+..|.|||.+....++.++|||+||++||++.| |-.||.+-+....+.-+.+ .+.+..+..+|+.+.+
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk-gyRM~~PeGCPpkVYe 497 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK-GYRMDGPEGCPPKVYE 497 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-cccccCCCCCCHHHHH
Confidence 4332 23567999999999999999999999999999997 8899998888776665544 4677788899999999
Q ss_pred HHHHhcccCCCCCCCHHhhhc
Q 023270 248 LISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (284)
|+++||+++|.+||++.++-+
T Consensus 498 LMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 498 LMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHHHhcCCcccCccHHHHHH
Confidence 999999999999999998743
No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-38 Score=251.77 Aligned_cols=262 Identities=31% Similarity=0.610 Sum_probs=225.8
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEec
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHD 90 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~ 90 (284)
..+.+.+++|+++++||.|+++.|.+++.+.+.+.||+|+++++.....+..+..+.|-.+..+- +||.++-++..|..
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 34567899999999999999999999999999999999999998877766667777777666654 68999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc--
Q 023270 91 DERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ-- 168 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~-- 168 (284)
+..+++|.||.++|+|---++++.+++++.++-+-..|.-||.|||++||+++|+|.+||+++..|++||.|+|....
T Consensus 323 esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999999999988888888999999999999999999999999999999999999999999999999999743
Q ss_pred -cCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCC-------CChHHH-HHHHHhcCCCCCCCC
Q 023270 169 -SRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEA-------ESQKDT-FRRIMKVDLSFPSAP 239 (284)
Q Consensus 169 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~-------~~~~~~-~~~~~~~~~~~~~~~ 239 (284)
.+..+...+|+|.|.|||++.+..+....|.|+||++|++|+.|+.||.. .+.++. .+-++......+.
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr-- 480 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR-- 480 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc--
Confidence 34455677899999999999999999999999999999999999999953 122333 3334444444443
Q ss_pred CCCHHHHHHHHHhcccCCCCCC------CHHhhhcCcccccc
Q 023270 240 SISAEAKHLISRLLVKDSSKRL------SLQKIMEHPWIIKN 275 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp------s~~~il~~~~~~~~ 275 (284)
.++-....+++..|++||++|. -..++..|+||+.-
T Consensus 481 slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 481 SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 5666788999999999999997 56899999999854
No 382
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=265.17 Aligned_cols=254 Identities=23% Similarity=0.384 Sum_probs=217.1
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
....++--+...++++||+|.||.|.++... .+..||+|.+....... ..+.|.+|+++|.+++||||+.++++|..
T Consensus 530 ~al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~--~r~~F~kEIkiLsqLkhPNIveLvGVC~~ 606 (807)
T KOG1094|consen 530 PALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKN--ARNDFLKEIKILSRLKHPNIVELLGVCVQ 606 (807)
T ss_pred cchhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchh--HHHHHHHHHHHHhccCCCCeeEEEeeeec
Confidence 3445666677899999999999999999863 47899999997655433 35789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
++.+++++||++.|+|..++..+ +.+......+++.||+.|++||.+.+++|||+.++|+|++.++++||+|||++..
T Consensus 607 DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccc
Confidence 99999999999999999999887 3446677788999999999999999999999999999999999999999999864
Q ss_pred cCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHH--hCCCCCCCCChHHHHHHHHhcC------CCC
Q 023270 169 SRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFL--YGAPPFEAESQKDTFRRIMKVD------LSF 235 (284)
Q Consensus 169 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~--tg~~p~~~~~~~~~~~~~~~~~------~~~ 235 (284)
.-... ....-+.+|+|||.+..++++.+||+|+||+++||++ +...||...+++...+..-... ...
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVL 766 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceec
Confidence 33222 2234478899999999999999999999999999976 5889999999988887765432 122
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhh
Q 023270 236 PSAPSISAEAKHLISRLLVKDSSKRLSLQKIM 267 (284)
Q Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 267 (284)
..++.+|..+.+++-.||..+-++|||++++-
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 33457899999999999999999999999984
No 383
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.1e-38 Score=267.54 Aligned_cols=257 Identities=26% Similarity=0.446 Sum_probs=217.9
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC------Ccccceee
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH------PNILRLYG 86 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h------~~i~~~~~ 86 (284)
.++.-..+|.|....|+|-||+|..|.+...|..||||++....... +.=..|+++|++|.. -|+++++-
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~----KtGl~EleiLkKL~~AD~Edk~Hclrl~r 501 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH----KTGLKELEILKKLNDADPEDKFHCLRLFR 501 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh----hhhhHHHHHHHHhhccCchhhhHHHHHHH
Confidence 45667789999999999999999999999999999999996654433 455678999999963 48999999
Q ss_pred EEecCCeEEEEEeecCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEee
Q 023270 87 WFHDDERIFLILEYAHRGELYRELRKHR---RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGD 162 (284)
Q Consensus 87 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d 162 (284)
.|...+++|+|+|-... +|.+.++.-+ .|....+..++.|++-||..|...|++|.||+|+|||++.+ ..+||||
T Consensus 502 ~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCD 580 (752)
T KOG0670|consen 502 HFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCD 580 (752)
T ss_pred HhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeecc
Confidence 99999999999999874 9999998754 58889999999999999999999999999999999999887 5699999
Q ss_pred cccccccCCCCc-cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC---
Q 023270 163 FGWSVQSRSKRH-TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA--- 238 (284)
Q Consensus 163 ~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 238 (284)
||.+.....+.. .+..+--|.|||++.+.+|+...|+||+||+||+|+||+..|.+.+.-..++-.+.....++..
T Consensus 581 fGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR 660 (752)
T KOG0670|consen 581 FGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR 660 (752)
T ss_pred CccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh
Confidence 999876655443 3345566999999999999999999999999999999999999988877776665543333330
Q ss_pred ------------------------------------------------CCC-------CHHHHHHHHHhcccCCCCCCCH
Q 023270 239 ------------------------------------------------PSI-------SAEAKHLISRLLVKDSSKRLSL 263 (284)
Q Consensus 239 ------------------------------------------------~~~-------~~~l~~li~~~l~~~p~~Rps~ 263 (284)
+.+ -.++++|+..||..||.+|.|+
T Consensus 661 KgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 661 KGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred hcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 011 2458899999999999999999
Q ss_pred HhhhcCccccc
Q 023270 264 QKIMEHPWIIK 274 (284)
Q Consensus 264 ~~il~~~~~~~ 274 (284)
.|+|.||||+.
T Consensus 741 nqAL~HpFi~~ 751 (752)
T KOG0670|consen 741 NQALKHPFITE 751 (752)
T ss_pred HHHhcCCcccC
Confidence 99999999985
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=248.66 Aligned_cols=265 Identities=26% Similarity=0.401 Sum_probs=214.5
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHH-HHHhCCCCcccceeeEEe
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREME-IQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~-~~~~l~h~~i~~~~~~~~ 89 (284)
....++.-.+.+-+..||.|+||+|++..++.+|+.+|||.+....... ..+.++.|.. .++.-+.|||+++++...
T Consensus 56 ~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k--eq~rll~e~d~~mks~~cp~IVkfyGa~F 133 (361)
T KOG1006|consen 56 AHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK--EQKRLLMEHDTVMKSSNCPNIVKFYGALF 133 (361)
T ss_pred ccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH--HHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence 3445566667778889999999999999999999999999997765522 3455556665 455557899999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeec
Q 023270 90 DDERIFLILEYAHRGELYRELR-----KHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDF 163 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~ 163 (284)
.++-.++-||.++ .|+..+-+ +...+++..+-.+....+.||.||.+. .|+|+|+||+|||++..|.+|||||
T Consensus 134 ~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDF 212 (361)
T KOG1006|consen 134 SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDF 212 (361)
T ss_pred cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecc
Confidence 9999999999997 47655432 234688998889999999999999965 8999999999999999999999999
Q ss_pred ccccccCCC--CccccCCCcccCccccCCC--CCCchhhHhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcCCCCCCC
Q 023270 164 GWSVQSRSK--RHTMCGTLDYLAPEMVENK--EHDYAVDNWTLGILCYEFLYGAPPFEAESQ-KDTFRRIMKVDLSFPSA 238 (284)
Q Consensus 164 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 238 (284)
|++....+. .....|-..|+|||.+... .++.+||+||||++|+|+.||..|+...+. .+.+.+...+..+....
T Consensus 213 GIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 213 GICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLF 292 (361)
T ss_pred cchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecC
Confidence 997543322 2334567789999998643 489999999999999999999999987655 46666666665444333
Q ss_pred C----CCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 239 P----SISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 239 ~----~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
+ .++..+..+|+-||.+|...||++.+++.+||++.-...
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 2 368899999999999999999999999999999876443
No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=267.38 Aligned_cols=254 Identities=31% Similarity=0.517 Sum_probs=214.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEe-----cCC
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFH-----DDE 92 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~-----~~~ 92 (284)
.-|.+...||.|.+|.||+++...+++..|+|+........ .++..|+.+++.. .|||++.+++++. .++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34889999999999999999999999999999986544332 4667788888877 5899999999984 557
Q ss_pred eEEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc--
Q 023270 93 RIFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ-- 168 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~-- 168 (284)
.+++|||||.+||..+++++. ..+.+..+..|++.++.|+.+||.+.++|+||+-.|||++.++.|||+|||.+.+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 999999999999999999875 4688999999999999999999999999999999999999999999999998743
Q ss_pred -cCCCCccccCCCcccCccccCC-----CCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC-CCCC
Q 023270 169 -SRSKRHTMCGTLDYLAPEMVEN-----KEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-APSI 241 (284)
Q Consensus 169 -~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 241 (284)
.....+.-.|+|.|+|||++.. ..++..+|+||||++..+|..|.+|+-+..+...+..+...-..... +..=
T Consensus 175 sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kW 254 (953)
T KOG0587|consen 175 STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKW 254 (953)
T ss_pred cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhH
Confidence 3455566789999999999853 34678999999999999999999999888886666555443211111 2345
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
++++.++|+.||..|.++||+..++|+|||+++++
T Consensus 255 s~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~ 289 (953)
T KOG0587|consen 255 SKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP 289 (953)
T ss_pred HHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence 67899999999999999999999999999999664
No 386
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.4e-36 Score=232.78 Aligned_cols=250 Identities=29% Similarity=0.555 Sum_probs=199.9
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCC--e
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDE--R 93 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~--~ 93 (284)
...+|++++++|.|.+|.||.+....++..++||++++-. .+.+.+|+.++..+. |+||++++++..++. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 4567999999999999999999999999999999985432 467889999999997 999999999997764 5
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEeecccccccCCC
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d~~~~~~~~~~ 172 (284)
..+++||.+..+...+- +.++..++..++.+++.||.|+|+.||.|+|+||.|+|++.. ..++|+|||++......
T Consensus 110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 78999999876555443 457889999999999999999999999999999999999876 56999999998655433
Q ss_pred Cc--cccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCC-CCCChHHHHHHHHhc-------------CCC-
Q 023270 173 RH--TMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPF-EAESQKDTFRRIMKV-------------DLS- 234 (284)
Q Consensus 173 ~~--~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~-~~~~~~~~~~~~~~~-------------~~~- 234 (284)
.. -..-+-.|--||.+-..+ ++..-|+|||||++..|+..+.|| .+.+..+.+-++-+. ...
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 32 223455678999886654 899999999999999999988887 444333322222111 111
Q ss_pred ---------------------CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 235 ---------------------FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 235 ---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
.....-.++++.+|+..+|..|-.+|+|+.+++.||||.-.
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 11112357999999999999999999999999999999743
No 387
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=243.94 Aligned_cols=263 Identities=28% Similarity=0.447 Sum_probs=212.5
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-----
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE----- 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~----- 92 (284)
..|-+-.+.||.|+||.||.+.+-.+|+.|++|++..-...- ..-+.+.+|++++...+|.|++..+++..-..
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L-~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNL-ASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHH-HHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 455667789999999999999999999999999985533222 22356778999999999999999999875443
Q ss_pred eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC
Q 023270 93 RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK 172 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 172 (284)
.+|+++|.+. .+|...|-+-+.++.+.+.-.+.||+.||+|||+.||.|+||||.|.+++.++.+||+|||++......
T Consensus 131 EiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 131 ELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 5788899885 588888888889999999999999999999999999999999999999999999999999998654432
Q ss_pred Cc----cccCCCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHh-----------------
Q 023270 173 RH----TMCGTLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMK----------------- 230 (284)
Q Consensus 173 ~~----~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----------------- 230 (284)
.. ....+..|.|||++.+.. ++.+.||||+||++.||+..+..|...++-+.+.-+..
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGA 289 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGA 289 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhh
Confidence 22 234578899999998876 89999999999999999999988876655443332222
Q ss_pred ------cCCCCCCC---------CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCCCCCCC
Q 023270 231 ------VDLSFPSA---------PSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANPRGTC 282 (284)
Q Consensus 231 ------~~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~ 282 (284)
+....++. ..-..+...++..++.+||.+|.+.++.+.|+|..++-.+.+.|
T Consensus 290 k~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~~sC 356 (449)
T KOG0664|consen 290 KNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSC 356 (449)
T ss_pred HHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccceeeeee
Confidence 11111211 12345678889999999999999999999999999987766665
No 388
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=263.87 Aligned_cols=239 Identities=31% Similarity=0.486 Sum_probs=190.2
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC------eE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE------RI 94 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~------~~ 94 (284)
+...+.||.|+||.||+++++.+|..||||.+.....- ...+..-+|++++++++|+|||++.++-+... ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~--r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL--RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhccc--chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 45667899999999999999999999999999775532 23466778999999999999999999755433 56
Q ss_pred EEEEeecCCCchHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC--C--CEEEeeccccc
Q 023270 95 FLILEYAHRGELYRELRK---HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE--G--RLKIGDFGWSV 167 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~--~--~~~l~d~~~~~ 167 (284)
.+|||||.+|+|...+.+ +..|++.+.+.++.++..|+.|||++||+|+||||.||++-.+ | .-||+|||.++
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 899999999999999965 4579999999999999999999999999999999999999433 3 58999999985
Q ss_pred ccC--CCCccccCCCcccCccccCC-CCCCchhhHhhHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcCCC------
Q 023270 168 QSR--SKRHTMCGTLDYLAPEMVEN-KEHDYAVDNWTLGILCYEFLYGAPPFEAESQK----DTFRRIMKVDLS------ 234 (284)
Q Consensus 168 ~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~------ 234 (284)
... .......||..|++||.+.. +.++...|+||||+++|++.||..||...... +...........
T Consensus 173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~ 252 (732)
T KOG4250|consen 173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGA 252 (732)
T ss_pred cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEee
Confidence 543 44456679999999999984 77899999999999999999999999654322 233333222111
Q ss_pred -------------CCCCCCCCH----HHHHHHHHhcccCCCCCC
Q 023270 235 -------------FPSAPSISA----EAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 235 -------------~~~~~~~~~----~l~~li~~~l~~~p~~Rp 261 (284)
++.+-.+++ .+-..+..+|..+|++|.
T Consensus 253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 111112233 345667788899999998
No 389
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.9e-35 Score=282.91 Aligned_cols=239 Identities=20% Similarity=0.289 Sum_probs=186.3
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
..|...+.||+|+||.||+|.+..++..||+|++...... ...+++.+++++||||+++++++.+++..++||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 4566778899999999999999899999999998543211 123577889999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCH---ENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh---~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 175 (284)
||+++++|.+++.. +++..+..++.+++.|+.||| +.+++|+|++|+||+++.++..++. ++....... ...
T Consensus 763 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-~~~ 837 (968)
T PLN00113 763 EYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-DTK 837 (968)
T ss_pred eCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-CCC
Confidence 99999999999964 789999999999999999999 6699999999999999988887765 444322111 122
Q ss_pred ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHh---------cCCCC--CCCC
Q 023270 176 MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ-----KDTFRRIMK---------VDLSF--PSAP 239 (284)
Q Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~---------~~~~~--~~~~ 239 (284)
..+++.|+|||++.+..++.++||||||+++||++||+.||..... .+..+.... ..... ....
T Consensus 838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (968)
T PLN00113 838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917 (968)
T ss_pred ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence 3567899999999999999999999999999999999999854211 111111100 00000 0000
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 240 SISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
....++.+++.+||..+|++|||++++++.
T Consensus 918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 918 NEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 122357789999999999999999999876
No 390
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=261.68 Aligned_cols=253 Identities=25% Similarity=0.451 Sum_probs=214.4
Q ss_pred cccccccCcEeeeeeccCCCeEEEEEEEec---C----CceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccce
Q 023270 13 KREWSLQDFEIGRPLGKGKFGRVYLVREVE---S----KHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRL 84 (284)
Q Consensus 13 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~---~----~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~ 84 (284)
.+++...+..+.+.||.|.||.|+++.... . ...||||........ ...+.+..|+.+++.+. |+|++.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 566777777888899999999999987542 1 345899998665444 44678899999999985 9999999
Q ss_pred eeEEecCCeEEEEEeecCCCchHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 023270 85 YGWFHDDERIFLILEYAHRGELYRELRKHR----------------RFTEQQAATYIASLTNALAYCHENHVIHRDIKPE 148 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ 148 (284)
++.+...+..++|.||+..|+|.++++..+ .++..+++.++.||+.|+.||++...+||||..+
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998765 4899999999999999999999999999999999
Q ss_pred CeEecCCCCEEEeecccccccCCCCcc----cc--CCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCC-
Q 023270 149 NLLLDHEGRLKIGDFGWSVQSRSKRHT----MC--GTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAES- 220 (284)
Q Consensus 149 nil~~~~~~~~l~d~~~~~~~~~~~~~----~~--~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~- 220 (284)
||++..+..+|++|||++......... .. -+..|+|||.+....++.+|||||+|+++||++| |..||.+..
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~ 527 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP 527 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc
Confidence 999999999999999999643322111 11 3456999999999999999999999999999998 999998865
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 221 QKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
..+.++ .++.......+..+++++.++++.||+.+|++||++.++.+
T Consensus 528 ~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 528 TEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 556655 55555566666678999999999999999999999998875
No 391
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=237.67 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=209.6
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCC-
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDE- 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~- 92 (284)
......+|.-++.+|.|.. .|..|-+.-.+.+|++|+...+... ....+...+|...+..++|+|+++++.++.-..
T Consensus 12 ~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 12 TFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred ceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 4456678999999999999 7888888899999999998665332 233456678999999999999999999985433
Q ss_pred -----eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 93 -----RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 93 -----~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
..|+|||+++ .+|...+. -.++-+.+..++.|++-|++|||+.||+|+||||+||++..++.+|+.|||++.
T Consensus 90 l~~~~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhc
Confidence 5899999997 58888776 346788899999999999999999999999999999999999999999999996
Q ss_pred ccCCC--CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC--------
Q 023270 168 QSRSK--RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS-------- 237 (284)
Q Consensus 168 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 237 (284)
..+.. ...+..+-.|.|||+..+-.+.+..||||+||++.+|++|+..|.+.+.-+.+.++...-..+..
T Consensus 167 ~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 167 TEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred ccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 65544 34455677899999999888999999999999999999999999886665554444332111110
Q ss_pred --------------------------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 238 --------------------------------APSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 238 --------------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
++.-+..+++++.+||..||++|.|++++|.||||+
T Consensus 247 ~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 247 TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 012245689999999999999999999999999997
No 392
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=4.4e-33 Score=221.85 Aligned_cols=209 Identities=42% Similarity=0.734 Sum_probs=187.4
Q ss_pred eccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCch
Q 023270 27 LGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGEL 106 (284)
Q Consensus 27 lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 106 (284)
||.|.+|.||++.+..+++.+++|++....... ..+.+.+|++.++.+.|++++++++++......++++|++++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999997655432 346788999999999999999999999999999999999998999
Q ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-CCCEEEeecccccccCCC---CccccCCCc
Q 023270 107 YRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-EGRLKIGDFGWSVQSRSK---RHTMCGTLD 181 (284)
Q Consensus 107 ~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~~~~~~---~~~~~~~~~ 181 (284)
.+++... ..++...++.++.+++.++.+||+.|++|+||+|.||+++. ++.++|+||+.+...... .....+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 9999876 57899999999999999999999999999999999999999 899999999998655443 344557788
Q ss_pred ccCccccCCC-CCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 182 YLAPEMVENK-EHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 182 y~aPE~~~~~-~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
|.+||..... ..+.++|+|++|++++++ ..+.+++..|+..+|.+|
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~R 205 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQKDPEKR 205 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhhCCcccC
Confidence 9999999877 788999999999999998 779999999999999999
Q ss_pred CCHHhhhcCc
Q 023270 261 LSLQKIMEHP 270 (284)
Q Consensus 261 ps~~~il~~~ 270 (284)
|+++++++++
T Consensus 206 ~~~~~l~~~~ 215 (215)
T cd00180 206 PSAKEILEHL 215 (215)
T ss_pred cCHHHHhhCC
Confidence 9999999875
No 393
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=253.97 Aligned_cols=244 Identities=23% Similarity=0.396 Sum_probs=208.6
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCc----eEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKH----PVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~----~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
.+-.++||+|+||+||++.+...++ +|+||++...... +.-.++.+|+-.|.+++|+|++++++++.... .-+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 4556789999999999999877655 4788887554432 23468889999999999999999999987555 888
Q ss_pred EEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCcc
Q 023270 97 ILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT 175 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~ 175 (284)
|++|++.|.|.++++.+ ..+..+..+.|..||++|+.|||+++++||||..+|||+...+++|+.|||++.........
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999999887 47899999999999999999999999999999999999999999999999998543322211
Q ss_pred -----ccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Q 023270 176 -----MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLI 249 (284)
Q Consensus 176 -----~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (284)
....+.|+|-|.+....++.++||||+|+++||++| |..|+.+..-+++-.-+.++. +.+.++..+-++..++
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge-RLsqPpiCtiDVy~~m 933 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE-RLSQPPICTIDVYMVM 933 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc-cCCCCCCccHHHHHHH
Confidence 123566899999999999999999999999999997 999999988887777666664 5888889999999999
Q ss_pred HHhcccCCCCCCCHHhhhc
Q 023270 250 SRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~ 268 (284)
.+||-.|+..||++.++.+
T Consensus 934 vkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 934 VKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HHHhccCcccCccHHHHHH
Confidence 9999999999999997754
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=258.60 Aligned_cols=244 Identities=28% Similarity=0.432 Sum_probs=192.1
Q ss_pred cEeeeeeccCCCeE-EEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecCCeEEEEE
Q 023270 21 FEIGRPLGKGKFGR-VYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 21 y~~~~~lg~g~~~~-v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
|.-.+++|.|..|+ ||++.. .++.||||++..+. ...+.+|++.++.- +||||++++..-.+..+.||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 34455678999888 688875 67799999985543 34567899988887 4999999999888888999999
Q ss_pred eecCCCchHHHHHhc-C---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC---CC--CEEEeeccccccc
Q 023270 99 EYAHRGELYRELRKH-R---RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH---EG--RLKIGDFGWSVQS 169 (284)
Q Consensus 99 e~~~~~~L~~~l~~~-~---~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~---~~--~~~l~d~~~~~~~ 169 (284)
|.|. -+|.++++.. . .......+.++.|+++|+++||+.+|+|+||+|.|||++. ++ .++|+|||++...
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9997 5999999884 1 1222456788999999999999999999999999999976 33 6999999998554
Q ss_pred CCC------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCC-C
Q 023270 170 RSK------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLSFPSAPS-I 241 (284)
Q Consensus 170 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (284)
... .....|+.+|.|||++....-+.+.|||||||++|+.++ |.+||...-.. ...++.+......... -
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~~~ 739 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLEPLP 739 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeeccCc
Confidence 322 244568999999999998888889999999999999888 59999865443 2233333322222111 1
Q ss_pred CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 242 SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 242 ~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
..+..+||++|++++|..||++.++|.||+|=..
T Consensus 740 d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 740 DCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 1289999999999999999999999999999543
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=244.53 Aligned_cols=202 Identities=31% Similarity=0.546 Sum_probs=178.4
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHH-----HHHHHHHHHHhCC---CCcccceeeE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQH-----QLRREMEIQSSLR---HPNILRLYGW 87 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~-----~~~~~~~~~~~l~---h~~i~~~~~~ 87 (284)
-++.+|..++.+|.|+||.|++|.++.+...|+||.+.++..-...+.+ .+-.|+++|..++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 3567899999999999999999999999999999999877664433322 3456899999997 9999999999
Q ss_pred EecCCeEEEEEeec-CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 88 FHDDERIFLILEYA-HRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 88 ~~~~~~~~~v~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
|++++++|++||.. ++.+|.++|+..+.+++.++..|+.|++.|+++||+.||+|+|||-+||.++.+|-+||+|||.+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 99999999999975 56799999999999999999999999999999999999999999999999999999999999987
Q ss_pred cc-cCCCCccccCCCcccCccccCCCCC-CchhhHhhHHHHHHHHHhCCCCCC
Q 023270 167 VQ-SRSKRHTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFE 217 (284)
Q Consensus 167 ~~-~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~tg~~p~~ 217 (284)
.. ..++.....||.+|.|||++.+..| ...-|||++|+++|-++....||-
T Consensus 718 a~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 718 AYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 44 4455667789999999999998885 678999999999998887777764
No 396
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-32 Score=227.10 Aligned_cols=242 Identities=25% Similarity=0.412 Sum_probs=183.9
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh--CCCCcccceeeEEecC---
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS--LRHPNILRLYGWFHDD--- 91 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~--l~h~~i~~~~~~~~~~--- 91 (284)
..++-++.+.||.|.||.||++.+ .|+.||||+|.... .+...+|.++.+. ++|+||+.+++.-..+
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hhheeEEEEEecCccccceeeccc--cCCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 456788999999999999999987 67789999995543 2345567666665 4899999999875433
Q ss_pred -CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCCCCCeEecCCCCEEEee
Q 023270 92 -ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN--------HVIHRDIKPENLLLDHEGRLKIGD 162 (284)
Q Consensus 92 -~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~--------gi~H~dl~p~nil~~~~~~~~l~d 162 (284)
.++++|++|++.|||.++|.+ ..++.+..++++.-++.||++||.. .|.|+|||.+|||+..++...|.|
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 279999999999999999988 6789999999999999999999953 399999999999999999999999
Q ss_pred cccccccC-------CCCccccCCCcccCccccCCCCC----C--chhhHhhHHHHHHHHHhC----------CCCCCC-
Q 023270 163 FGWSVQSR-------SKRHTMCGTLDYLAPEMVENKEH----D--YAVDNWTLGILCYEFLYG----------APPFEA- 218 (284)
Q Consensus 163 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~----~--~~~Di~slG~il~~l~tg----------~~p~~~- 218 (284)
+|++.... -+.+...||.+|+|||++..... . ..+||||||.++||+.-. .+||-+
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 99984433 23355679999999999965432 1 368999999999998732 256533
Q ss_pred ---CChHHHHHH-HHhcCCCCCCCCC--CC---HHHHHHHHHhcccCCCCCCCHHhhh
Q 023270 219 ---ESQKDTFRR-IMKVDLSFPSAPS--IS---AEAKHLISRLLVKDSSKRLSLQKIM 267 (284)
Q Consensus 219 ---~~~~~~~~~-~~~~~~~~~~~~~--~~---~~l~~li~~~l~~~p~~Rps~~~il 267 (284)
....+.+++ ..-....+..+.. -. ..+-++++.||..||..|.|+--|-
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 122233333 2222233322221 11 2466889999999999999886553
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=230.23 Aligned_cols=239 Identities=23% Similarity=0.380 Sum_probs=182.9
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHH--hCCCCcccceeeEEecCC---
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQS--SLRHPNILRLYGWFHDDE--- 92 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~--~l~h~~i~~~~~~~~~~~--- 92 (284)
+...++.+.||.|.||.||+|+. .++.||||+|...... .+..|-++.+ .++|+||+++++.-..+.
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kq------s~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQ------SFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHH------HHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 44567788999999999999986 4589999999665433 3334444333 568999999999765444
Q ss_pred -eEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------CccccCCCCCCeEecCCCCEEEee
Q 023270 93 -RIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN---------HVIHRDIKPENLLLDHEGRLKIGD 162 (284)
Q Consensus 93 -~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~---------gi~H~dl~p~nil~~~~~~~~l~d 162 (284)
.+.+|++|++.|+|.++|..+ .+++....+++.-+++||+|||+. .|+|+|||.+|||+..|++..|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 899999999999999999885 579999999999999999999964 499999999999999999999999
Q ss_pred ccccccc-----CCCCccccCCCcccCccccCCCC-CC-----chhhHhhHHHHHHHHHhCCCC------------CC--
Q 023270 163 FGWSVQS-----RSKRHTMCGTLDYLAPEMVENKE-HD-----YAVDNWTLGILCYEFLYGAPP------------FE-- 217 (284)
Q Consensus 163 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~-~~-----~~~Di~slG~il~~l~tg~~p------------~~-- 217 (284)
||++... .+.....+||.+|+|||++.+.. +. ...||||+|.++||+++.... |+
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 9998433 23334467999999999997654 22 468999999999999975432 22
Q ss_pred ---CCChHHHHHHHHhcCCCCCCCC-----CCCHHHHHHHHHhcccCCCCCCCHHh
Q 023270 218 ---AESQKDTFRRIMKVDLSFPSAP-----SISAEAKHLISRLLVKDSSKRLSLQK 265 (284)
Q Consensus 218 ---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~Rps~~~ 265 (284)
.++.++...-....+.++..++ .-...+++.+..||+.||+.|.|+.=
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~C 495 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGC 495 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence 1233444444333333332221 22346889999999999999999863
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=100.00 E-value=2.5e-31 Score=214.44 Aligned_cols=209 Identities=39% Similarity=0.699 Sum_probs=181.0
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
|.+.+.||.|++++||++....+++.+++|.+...... ...+.+.+|++.++.++|+|++++++++......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67889999999999999999888999999999765433 2356888899999999999999999999998999999999
Q ss_pred cCCCchHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC----cc
Q 023270 101 AHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR----HT 175 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~-l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~----~~ 175 (284)
+++++|.+++..... ++...+..++.+++.++.+||+.|++|+|++|+||+++.++.++|+|||.+....... ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 998899999988766 8999999999999999999999999999999999999999999999999875554332 44
Q ss_pred ccCCCcccCcccc-CCCCCCchhhHhhHHHHHHHHHhCCCCCCC-CChH-HHHHHHHhc
Q 023270 176 MCGTLDYLAPEMV-ENKEHDYAVDNWTLGILCYEFLYGAPPFEA-ESQK-DTFRRIMKV 231 (284)
Q Consensus 176 ~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~-~~~~~~~~~ 231 (284)
..+...|++||.+ ....++.++|+|+||++++++++|+.||.. .... ...+.+..+
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG 217 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence 4567889999998 666788899999999999999999999977 4444 555555444
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=5.3e-33 Score=229.78 Aligned_cols=259 Identities=24% Similarity=0.414 Sum_probs=204.2
Q ss_pred hhhcccccccCcEeeeeeccCCCeEEEEEEEec---CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCccccee
Q 023270 10 DNRKREWSLQDFEIGRPLGKGKFGRVYLVREVE---SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLY 85 (284)
Q Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~---~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~ 85 (284)
..+......+.|.++.+||.|.|++||++.+.. ....||+|.+...+.. ..+..|++.+..+. +.||+++.
T Consensus 27 l~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~ 101 (418)
T KOG1167|consen 27 LRQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLN 101 (418)
T ss_pred HHhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcch
Confidence 344566777889999999999999999999887 7888999998665433 35778999999885 89999999
Q ss_pred eEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEeecc
Q 023270 86 GWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGDFG 164 (284)
Q Consensus 86 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d~~ 164 (284)
+.+..+++..+|+||.+.....++... ++..++..+++.++.||.++|.+||+|+||||+|++.+.. +.-.|+|||
T Consensus 102 ~~~rnnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 102 GCFRNNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred hhhccCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEech
Confidence 999999999999999998888887755 6789999999999999999999999999999999999764 789999999
Q ss_pred cccc-c---------------CCC----------------C---------------ccccCCCcccCccccCCC-CCCch
Q 023270 165 WSVQ-S---------------RSK----------------R---------------HTMCGTLDYLAPEMVENK-EHDYA 196 (284)
Q Consensus 165 ~~~~-~---------------~~~----------------~---------------~~~~~~~~y~aPE~~~~~-~~~~~ 196 (284)
++.. . ..+ . -...||++|.|||++... .-+.+
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 8630 0 000 0 013478999999998654 47889
Q ss_pred hhHhhHHHHHHHHHhCCCCCCCCC-hHHHHHH---------------------------------HHhcCC---------
Q 023270 197 VDNWTLGILCYEFLYGAPPFEAES-QKDTFRR---------------------------------IMKVDL--------- 233 (284)
Q Consensus 197 ~Di~slG~il~~l~tg~~p~~~~~-~~~~~~~---------------------------------~~~~~~--------- 233 (284)
.||||.|+++..++++..||-... +-..+.+ ......
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~ 338 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYK 338 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccc
Confidence 999999999999999999974321 1000000 000000
Q ss_pred -------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 234 -------SFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 234 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.....+..+..+.+|+.+||..||.+|.|++++|.||||....
T Consensus 339 ~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 339 SRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred ccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 0011123466899999999999999999999999999998653
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=245.10 Aligned_cols=256 Identities=28% Similarity=0.460 Sum_probs=218.6
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.+|..++++|.|++|.||+++++.+++..|+|+++....+. ..-+.+|+-+++..+|+||+.+++.+.....+++.|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 57999999999999999999999999999999997655444 356778999999999999999999999999999999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc---CCCCcc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS---RSKRHT 175 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~---~~~~~~ 175 (284)
|||++|+|++.-.-.+++++.++..+.+..+++++|||..|=+|+|||-.||++++.|.+|+.|||.+-.. ......
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 99999999997777789999999999999999999999999999999999999999999999999987332 233345
Q ss_pred ccCCCcccCcccc---CCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHHHHHH
Q 023270 176 MCGTLDYLAPEMV---ENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPS---APSISAEAKHLI 249 (284)
Q Consensus 176 ~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li 249 (284)
..|++.|+|||+. +.+.+...+|+|++|+...++-.-.+|.....+...+.-..+..+..+- ...-++.+-+|+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fv 251 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFV 251 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHH
Confidence 6799999999986 4667899999999999999998877776555555544444444333332 224567899999
Q ss_pred HHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 250 SRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 250 ~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
+.+|..+|++||+++.+|.|||+.+.-.
T Consensus 252 K~altknpKkRptaeklL~h~fvs~~l~ 279 (829)
T KOG0576|consen 252 KGALTKNPKKRPTAEKLLQHPFVSQTLS 279 (829)
T ss_pred HHHhcCCCccCCChhhheeceeeccchh
Confidence 9999999999999999999999987643
No 401
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-32 Score=204.81 Aligned_cols=215 Identities=27% Similarity=0.414 Sum_probs=175.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh-CCCCcccceeeEEecCC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS-LRHPNILRLYGWFHDDE 92 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~~~~~~ 92 (284)
.++.-.+......||.|++|.|-+.++..+|...|+|.+...-... ..+.+.+++.+..+ ..+|.++.+++.....+
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q--~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ--EQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChH--HHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 4455556667788999999999999999999999999997655433 34566667766554 46899999999998999
Q ss_pred eEEEEEeecCCCchHHH----HHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 93 RIFLILEYAHRGELYRE----LRKHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~----l~~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
..++.||.++. ||..+ ++.++.+++..+-+++.-+..|+.+||++ .++|+|+||+|||++.+|++|+||||.+.
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999999974 77544 45567899999999999999999999987 79999999999999999999999999985
Q ss_pred ccCCCC--ccccCCCcccCccccC----CCCCCchhhHhhHHHHHHHHHhCCCCCCC-CChHHHHHHHHhc
Q 023270 168 QSRSKR--HTMCGTLDYLAPEMVE----NKEHDYAVDNWTLGILCYEFLYGAPPFEA-ESQKDTFRRIMKV 231 (284)
Q Consensus 168 ~~~~~~--~~~~~~~~y~aPE~~~----~~~~~~~~Di~slG~il~~l~tg~~p~~~-~~~~~~~~~~~~~ 231 (284)
...+.- ....|-..|+|||.+. ...|+.+|||||||+++.||.+++.||.. .++.+++.+....
T Consensus 198 ~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 198 YLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred eehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 443322 2245677899999875 33688999999999999999999999965 5677777776654
No 402
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-31 Score=217.11 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=208.1
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCC-----ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESK-----HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
.+.-.+++....+-+|.||.||.+.+.+.. +.|.+|.+.... +.-....+..|.-++..+.|+|++++.++..
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 344456888888999999999999766543 346777764432 2234567778888889999999999999876
Q ss_pred cC-CeEEEEEeecCCCchHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEE
Q 023270 90 DD-ERIFLILEYAHRGELYRELRKH--------RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKI 160 (284)
Q Consensus 90 ~~-~~~~~v~e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l 160 (284)
++ ...++++.+.+-|+|..++..+ +.++..++..++.|++.|+.|||++|++|.||..+|.++++.-++||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 54 5778999999999999999733 35788899999999999999999999999999999999999999999
Q ss_pred eecccccccCCCC-----ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCC
Q 023270 161 GDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLY-GAPPFEAESQKDTFRRIMKVDLS 234 (284)
Q Consensus 161 ~d~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~ 234 (284)
+|=.++++.-... .....+..|++||.+.+..++.++|+||||++||||+| |+.|+..-++.+...-++.+ .+
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-yR 516 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-YR 516 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc-ce
Confidence 9988875433222 12234678999999999999999999999999999998 99999999998888777766 45
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 235 FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
...+-++|+++..++-.||...|++||+++|+..
T Consensus 517 laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 517 LAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 5556689999999999999999999999999875
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=208.95 Aligned_cols=250 Identities=25% Similarity=0.435 Sum_probs=194.3
Q ss_pred ccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeE-EecCCeEE
Q 023270 18 LQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGW-FHDDERIF 95 (284)
Q Consensus 18 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~-~~~~~~~~ 95 (284)
...|.|.+.+|+|.||.+.++.+..+++.+++|.+..+.... ++|.+|...--.| .|.||+.-++. |..-+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~----~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ----ADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhH----HHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 356999999999999999999999999999999998766444 5666777655555 48999988776 45667889
Q ss_pred EEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC--CCEEEeecccccccCCCC
Q 023270 96 LILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE--GRLKIGDFGWSVQSRSKR 173 (284)
Q Consensus 96 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~--~~~~l~d~~~~~~~~~~~ 173 (284)
+++||++.|+|.+-+..+ .+.+.....++.|+++||.|+|+.+++|+|||.+|||+-.. -.+||+|||.....+..-
T Consensus 99 F~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 999999999999877653 46788889999999999999999999999999999999543 379999999987776655
Q ss_pred ccccCCCcccCccccCCC-----CCCchhhHhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcCCC-CCC-CCCCC
Q 023270 174 HTMCGTLDYLAPEMVENK-----EHDYAVDNWTLGILCYEFLYGAPPFEAESQ----KDTFRRIMKVDLS-FPS-APSIS 242 (284)
Q Consensus 174 ~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~-~~~-~~~~~ 242 (284)
........|.+||..... ...+.+|+|.||++++.++||.+||..... ..-+.+..++..+ .+. -..++
T Consensus 178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs 257 (378)
T KOG1345|consen 178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFS 257 (378)
T ss_pred hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccC
Confidence 444556678999976432 246899999999999999999999975322 1222333332211 111 12578
Q ss_pred HHHHHHHHHhcccCCCCC---CCHHhhhcCccc
Q 023270 243 AEAKHLISRLLVKDSSKR---LSLQKIMEHPWI 272 (284)
Q Consensus 243 ~~l~~li~~~l~~~p~~R---ps~~~il~~~~~ 272 (284)
+.+..+.++-|.+++++| .++.......|.
T Consensus 258 ~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 258 EKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred HHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 889999999999999999 566555554443
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=6.4e-31 Score=247.96 Aligned_cols=194 Identities=18% Similarity=0.214 Sum_probs=143.4
Q ss_pred CcccceeeEE-------ecCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 023270 79 PNILRLYGWF-------HDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENL 150 (284)
Q Consensus 79 ~~i~~~~~~~-------~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~ni 150 (284)
.||+++++++ ...+.++.++|+++ ++|.+++... ..++...++.++.||+.||.|||++||+|+||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4677777766 22346777889875 6999999764 4689999999999999999999999999999999999
Q ss_pred EecCCCCE-------------------EEeecccccccCCC-------------------CccccCCCcccCccccCCCC
Q 023270 151 LLDHEGRL-------------------KIGDFGWSVQSRSK-------------------RHTMCGTLDYLAPEMVENKE 192 (284)
Q Consensus 151 l~~~~~~~-------------------~l~d~~~~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~ 192 (284)
|++..+.+ +++|||++...... .....+++.|+|||++.+..
T Consensus 112 Ll~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 191 (793)
T PLN00181 112 VMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSS 191 (793)
T ss_pred EEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCC
Confidence 99665544 55555554221100 01124677899999999999
Q ss_pred CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q 023270 193 HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWI 272 (284)
Q Consensus 193 ~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (284)
++.++|||||||++|+|++|..|+.... .....+....... ......+....++.+||.++|.+||++.++++||||
T Consensus 192 ~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~ 268 (793)
T PLN00181 192 SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLPP-QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFI 268 (793)
T ss_pred CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcCh-hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhh
Confidence 9999999999999999999988765322 1222222211111 111224567789999999999999999999999999
Q ss_pred cccC
Q 023270 273 IKNA 276 (284)
Q Consensus 273 ~~~~ 276 (284)
.+..
T Consensus 269 ~~~~ 272 (793)
T PLN00181 269 NEPR 272 (793)
T ss_pred hhhh
Confidence 8753
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=1.3e-29 Score=197.34 Aligned_cols=162 Identities=20% Similarity=0.214 Sum_probs=130.5
Q ss_pred CchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCCCcc
Q 023270 104 GELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDY 182 (284)
Q Consensus 104 ~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~y 182 (284)
|+|.+++... ..+++..++.++.|++.||.|||+.| ||+||+++.++.+++ ||.+....... ..+++.|
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--~~g~~~y 70 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--SRVDPYF 70 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc--CCCcccc
Confidence 5889999874 56999999999999999999999998 999999999999999 99875543322 2578999
Q ss_pred cCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcCCCCC-----CCCCCCH--HHHHHHHHhcc
Q 023270 183 LAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ-KDTFRRIMKVDLSFP-----SAPSISA--EAKHLISRLLV 254 (284)
Q Consensus 183 ~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~--~l~~li~~~l~ 254 (284)
+|||++.+..++.++||||||+++|+|++|..||..... ............... ....++. ++.+++.+||.
T Consensus 71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~ 150 (176)
T smart00750 71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCAS 150 (176)
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHh
Confidence 999999999999999999999999999999999976543 233333333221111 1112333 69999999999
Q ss_pred cCCCCCCCHHhhhcCcccccc
Q 023270 255 KDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 255 ~~p~~Rps~~~il~~~~~~~~ 275 (284)
.+|.+||++.++++|+|+...
T Consensus 151 ~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 151 RLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred cccccccCHHHHHHHHHHHHH
Confidence 999999999999999998643
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.9e-28 Score=221.05 Aligned_cols=256 Identities=28% Similarity=0.418 Sum_probs=201.4
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhh---hhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFK---EQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~---~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
.-...+|.|++|.++.+......+.+..|.+.. ...........+..|+-+-..++|++++..+..+.+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 567788999999888888777766666665532 12222222233667777788889999988877777666666669
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCC-----
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR----- 173 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~----- 173 (284)
|||++ +|..++.....++..++-.++.|++.|+.|+|+.|+.|+|++++|++++.+|.+|++|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~ 479 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH 479 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence 99998 999999998889999999999999999999999999999999999999999999999999874433222
Q ss_pred --ccccCCCcccCccccCCCCCCc-hhhHhhHHHHHHHHHhCCCCCCCCChHHHHH--HHHhcC-----CCCCCCCCCCH
Q 023270 174 --HTMCGTLDYLAPEMVENKEHDY-AVDNWTLGILCYEFLYGAPPFEAESQKDTFR--RIMKVD-----LSFPSAPSISA 243 (284)
Q Consensus 174 --~~~~~~~~y~aPE~~~~~~~~~-~~Di~slG~il~~l~tg~~p~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~ 243 (284)
....|+..|.|||.+.+..+++ ..||||.|+++..|.+|..||......+... ...... ........++.
T Consensus 480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ 559 (601)
T KOG0590|consen 480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPR 559 (601)
T ss_pred hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchh
Confidence 3456788999999999999876 6899999999999999999997655543321 111110 11111235788
Q ss_pred HHHHHHHHhcccCCCCCCCHHhhhcCccccccCCC
Q 023270 244 EAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNANP 278 (284)
Q Consensus 244 ~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (284)
+-+.+|.+||+++|.+|.|+++|++.+||+....+
T Consensus 560 ~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 560 ETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred hHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence 89999999999999999999999999999987554
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-26 Score=195.65 Aligned_cols=246 Identities=24% Similarity=0.307 Sum_probs=192.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCC-ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC----CCcccceeeEE-ecCCe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESK-HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR----HPNILRLYGWF-HDDER 93 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~-~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~----h~~i~~~~~~~-~~~~~ 93 (284)
+|.+.+.||.|+||.||++.+..++ ..+|+|.......... ..+..|..++..+. ..++..+++.+ ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999987775 5788888654321111 14556666666665 36899999988 57788
Q ss_pred EEEEEeecCCCchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-----CCEEEeecccc
Q 023270 94 IFLILEYAHRGELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-----GRLKIGDFGWS 166 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-----~~~~l~d~~~~ 166 (284)
.++||+.+ |.+|.++.... +.++...++.++.|++.+|.++|+.|++|+||||.|+++... ..+.|.|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 46999988655 479999999999999999999999999999999999999865 46999999998
Q ss_pred c--cc----CC----C---CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC
Q 023270 167 V--QS----RS----K---RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDL 233 (284)
Q Consensus 167 ~--~~----~~----~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~ 233 (284)
. .. .. . .....||..|+++....+...+++.|+||++.++.+++.|..||..........+..+...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 6 21 11 0 1123389999999999999999999999999999999999999977664332333222211
Q ss_pred CCC---CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 234 SFP---SAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 234 ~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
... .....+.++..+...+-..+...+|.+..+...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 111 223456788888888888999999999888665
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=7.2e-27 Score=180.76 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=200.9
Q ss_pred hhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC-CcccceeeEE
Q 023270 10 DNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH-PNILRLYGWF 88 (284)
Q Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h-~~i~~~~~~~ 88 (284)
...+..+....|.++++||+|+||.+|.+....+|..||||+-....- ...+..|..+.+.+++ ..|..+..++
T Consensus 6 ~s~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 6 GSLEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred cchhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhc
Confidence 445667889999999999999999999999999999999999533221 1355667777877765 6788888888
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC---CCEEEeecc
Q 023270 89 HDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE---GRLKIGDFG 164 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~---~~~~l~d~~ 164 (284)
.+..+-.+||+... .||.++..-+ ..++.+.++-++.|++.-++|+|.++++|+||||+|+++.-+ ..+.|+|||
T Consensus 81 ~e~~ynvlVMdLLG-PsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 81 TEKDYNVLVMDLLG-PSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred cccccceeeeeccC-ccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 88999999999994 6999988754 578999999999999999999999999999999999999755 579999999
Q ss_pred cccccCCC----------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhc
Q 023270 165 WSVQSRSK----------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ---KDTFRRIMKV 231 (284)
Q Consensus 165 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~---~~~~~~~~~~ 231 (284)
++...... .....||.+|.+-....+...+...|+-|+|.++.++--|..||.+... ..-++++...
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek 239 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK 239 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh
Confidence 98543322 2345688999999988888889999999999999999999999987533 3344444443
Q ss_pred CCCCCC---CCCCCHHHHHHHHHhcccCCCCCCCHH
Q 023270 232 DLSFPS---APSISAEAKHLISRLLVKDSSKRLSLQ 264 (284)
Q Consensus 232 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~ 264 (284)
....+. ...+|.++...+..|-..--++-|..-
T Consensus 240 K~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 240 KMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred hcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 333222 346889999999999877777777654
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-26 Score=185.08 Aligned_cols=245 Identities=23% Similarity=0.390 Sum_probs=202.1
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeE
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERI 94 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~ 94 (284)
+....|+|.++||+|.||.+|.++...++.+||||.=...+ ...+++.|++..+.|. .++|..++.+..++.+-
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 56678999999999999999999999999999999853322 2457888888888885 68999999988999999
Q ss_pred EEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-----CEEEeecccccc
Q 023270 95 FLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-----RLKIGDFGWSVQ 168 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-----~~~l~d~~~~~~ 168 (284)
.+|+|... .||.++..-+ ..++.+.+..++.|++.-++++|++.++.+||||+|+|+...+ .+.++|||++..
T Consensus 100 iLVidLLG-PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 100 ILVIDLLG-PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhhhC-cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 99999994 6999999877 4799999999999999999999999999999999999997654 599999999855
Q ss_pred cCCCC----------ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCC---CChHHHHHHHHhcCCCC
Q 023270 169 SRSKR----------HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEA---ESQKDTFRRIMKVDLSF 235 (284)
Q Consensus 169 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~---~~~~~~~~~~~~~~~~~ 235 (284)
...+. ....||.+|++.....+..-+...|+-|||.++++++-|.+||.+ .+..+.++++-......
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 43322 235689999999999999999999999999999999999999976 45566666655443333
Q ss_pred CC---CCCCCHHHHHHHHHhcccCCCCCCCHHhh
Q 023270 236 PS---APSISAEAKHLISRLLVKDSSKRLSLQKI 266 (284)
Q Consensus 236 ~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~i 266 (284)
+. ...+|.++..-++..-..+-.+-|.++-+
T Consensus 259 ~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdyl 292 (449)
T KOG1165|consen 259 PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYL 292 (449)
T ss_pred CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHH
Confidence 22 23577788877777777777777766533
No 410
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.94 E-value=3.6e-27 Score=192.50 Aligned_cols=235 Identities=25% Similarity=0.393 Sum_probs=160.2
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC----------CCcccceeeEE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR----------HPNILRLYGWF 88 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~----------h~~i~~~~~~~ 88 (284)
..+.....||.|+++.||.+.+.++++.+++|++...........+.+++|......+. |-.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 35678889999999999999999999999999987665444445667777665554432 23444444543
Q ss_pred ecC------------C-----eEEEEEeecCCCchHHHHHh---cCC----CCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 023270 89 HDD------------E-----RIFLILEYAHRGELYRELRK---HRR----FTEQQAATYIASLTNALAYCHENHVIHRD 144 (284)
Q Consensus 89 ~~~------------~-----~~~~v~e~~~~~~L~~~l~~---~~~----l~~~~~~~i~~~i~~~l~~lh~~gi~H~d 144 (284)
.-. + +.+++|+-+. ++|..++.. ... +.....+.+..|++..+++||..|++|||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgd 170 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGD 170 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecc
Confidence 211 1 3477888875 588777642 221 23344455668999999999999999999
Q ss_pred CCCCCeEecCCCCEEEeecccccccCCCCccccCCCcccCccccCC--------CCCCchhhHhhHHHHHHHHHhCCCCC
Q 023270 145 IKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVEN--------KEHDYAVDNWTLGILCYEFLYGAPPF 216 (284)
Q Consensus 145 l~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~il~~l~tg~~p~ 216 (284)
|+|+|++++.+|.++|+||+.....+........+..|.|||.... ..++.+.|.|+||+++|.++++..||
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999987666655444445677999997643 24688999999999999999999999
Q ss_pred CCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 023270 217 EAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKR 260 (284)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 260 (284)
........... .+.....+|..++.||..+|++||.+|
T Consensus 251 ~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 86654322221 233344799999999999999999988
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=2.6e-24 Score=182.62 Aligned_cols=253 Identities=39% Similarity=0.648 Sum_probs=208.7
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCC-cccceeeEEecCCeEEEEEe
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHP-NILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~-~i~~~~~~~~~~~~~~~v~e 99 (284)
|.+.+.||.|+|+.||++.+. ..+++|.+.............+.+++..+..+.|+ +++++.+.+...+..+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 789999999999999999987 78899998776655444567888999999999988 79999999987788899999
Q ss_pred ecCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC-CEEEeecccccccCC----
Q 023270 100 YAHRGELYRELRKHR---RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSRS---- 171 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~---~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~~---- 171 (284)
++.++++.+.+.... .++......++.+++.++.++|+.|++|+|++|+||+++..+ .++++|||.+.....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999997777765 789999999999999999999999999999999999999998 799999998753322
Q ss_pred -----CCccccCCCcccCccccCC---CCCCchhhHhhHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcCCC-CCC-
Q 023270 172 -----KRHTMCGTLDYLAPEMVEN---KEHDYAVDNWTLGILCYEFLYGAPPFEAESQ----KDTFRRIMKVDLS-FPS- 237 (284)
Q Consensus 172 -----~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~il~~l~tg~~p~~~~~~----~~~~~~~~~~~~~-~~~- 237 (284)
......++..|.+||...+ .......|+|++|++++++++|..||..... ......+...... ...
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP 238 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence 2345678999999999987 5788999999999999999999999877764 3444444433322 111
Q ss_pred -CCCC----CHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 238 -APSI----SAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 238 -~~~~----~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
.... ...+.+++..++..+|..|.+..+...+++.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 1111 15799999999999999999999999987766543
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=4.5e-25 Score=187.68 Aligned_cols=167 Identities=18% Similarity=0.145 Sum_probs=127.6
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEec-CCceEEEEehhhhhH--HHHHHHHHHHHHHHHHHhCCCCcccceeeEEec
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVE-SKHPVALKIIFKEQI--EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHD 90 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~ 90 (284)
......+|.+.+.||+|+||+||+|.+.. ++..+|||+...... ........+.+|+++++.++|+++++.+..
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--- 89 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--- 89 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence 45567889999999999999999998876 667789998653211 122335678999999999999999853322
Q ss_pred CCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC-CCCCeEecCCCCEEEeeccccccc
Q 023270 91 DERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDI-KPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 91 ~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl-~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
.+..|+||||+++++|.. +. ... ...++.+++++|.+||+.|++|+|| ||+||+++.++.++|+|||++...
T Consensus 90 ~~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred cCCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 245899999999988863 21 111 1467889999999999999999999 999999999999999999998533
Q ss_pred CCCC-----------ccccCCCcccCccccCC
Q 023270 170 RSKR-----------HTMCGTLDYLAPEMVEN 190 (284)
Q Consensus 170 ~~~~-----------~~~~~~~~y~aPE~~~~ 190 (284)
.... ....+++.|+|||.+..
T Consensus 163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 2211 12235667899998853
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-27 Score=215.74 Aligned_cols=237 Identities=24% Similarity=0.344 Sum_probs=183.0
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhh--HHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQ--IEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
+|..++.||.+.|=.|.++++.++ .|+||+|.+.. ..-....+.+ .+++ ...+++||++++.-.-..+...|+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL-~~ik-~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRL-EEIK-FALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHH-HHHH-HHhhcCCcccchHHHHHhhHHHHHH
Confidence 789999999999999999997543 39999986654 2222233333 3444 5567899999998887788888999
Q ss_pred EeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC----CCC
Q 023270 98 LEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR----SKR 173 (284)
Q Consensus 98 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~----~~~ 173 (284)
-+|.. -+|.+.+...+-+...+.+.|+.|++.|+..+|+.||+|||||.+|||++.-+++.|+||+..+..- ++.
T Consensus 100 Rqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 100 RQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred HHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 99986 4999999999999999999999999999999999999999999999999999999999999763321 111
Q ss_pred c------cccCCCcccCccccCCC-----------CCCchhhHhhHHHHHHHHHh-CCCCCCCCChH-------HHHHHH
Q 023270 174 H------TMCGTLDYLAPEMVENK-----------EHDYAVDNWTLGILCYEFLY-GAPPFEAESQK-------DTFRRI 228 (284)
Q Consensus 174 ~------~~~~~~~y~aPE~~~~~-----------~~~~~~Di~slG~il~~l~t-g~~p~~~~~~~-------~~~~~~ 228 (284)
. ....-..|.|||.+-.. ..+++.||||+||+++||++ |.++|.-..-- ...++.
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~ 258 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQL 258 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHH
Confidence 0 11123459999988431 15789999999999999986 89998632111 111111
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q 023270 229 MKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 269 (284)
+.. .-+..++++|..|++.||.+|.|+++.|+.
T Consensus 259 Le~--------Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 259 LEK--------IEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHh--------CcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111 123469999999999999999999999986
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.92 E-value=5.6e-25 Score=174.61 Aligned_cols=176 Identities=12% Similarity=0.159 Sum_probs=135.9
Q ss_pred cccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHH------HHHHHHHHHhCCCCcccceeeEE
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQ------LRREMEIQSSLRHPNILRLYGWF 88 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~------~~~~~~~~~~l~h~~i~~~~~~~ 88 (284)
.+--.+|++.+.+|.|+||.||++.+ ++..+++|++............. +.+|++.+.++.|+++..+.+++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 45568899999999999999999655 46689999997655444433333 67899999999999999999886
Q ss_pred ecC--------CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEE
Q 023270 89 HDD--------ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKI 160 (284)
Q Consensus 89 ~~~--------~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l 160 (284)
... +..+++|||++|.+|.++.. ++. ....+++.++..+|+.|++|||++|+||+++++| ++|
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 533 35799999999989977632 233 3456999999999999999999999999999999 999
Q ss_pred eecccccccCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHH
Q 023270 161 GDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFL 210 (284)
Q Consensus 161 ~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 210 (284)
+|||........... ..+.....++.++|+|+||+++..+.
T Consensus 176 iDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 999976443221111 01333444667999999999988764
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5.5e-25 Score=173.35 Aligned_cols=251 Identities=21% Similarity=0.336 Sum_probs=208.4
Q ss_pred hhhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 10 DNRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
..+...+.+.+..+..+|.....|..|+++.+++ .+++|++....... ..-+.|..|.-.++-..||||+++++.+.
T Consensus 181 lsr~~gid~~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacn 257 (448)
T KOG0195|consen 181 LSRYTGIDVSSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACN 257 (448)
T ss_pred cccccCcchhhhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhcc
Confidence 3456778888999999999999999999998654 46677776555443 33467788888888889999999999999
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeEecCCCCEEEe--ec
Q 023270 90 DDERIFLILEYAHRGELYRELRKHR--RFTEQQAATYIASLTNALAYCHENH--VIHRDIKPENLLLDHEGRLKIG--DF 163 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~~i~~~l~~lh~~g--i~H~dl~p~nil~~~~~~~~l~--d~ 163 (284)
++.++.++..|++.+||...+..+. -.+..++.+++.+++.++.|||+.. |.---+....|+++++-+++|+ |-
T Consensus 258 sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 258 SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 9999999999999999999998764 3577889999999999999999874 4445688999999998776664 33
Q ss_pred ccccccCCCCccccCCCcccCccccCCCCCC---chhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCC
Q 023270 164 GWSVQSRSKRHTMCGTLDYLAPEMVENKEHD---YAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPS 240 (284)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
.++.+.. .....|.|++||.+...+.+ .++|+|||++++|+|.|...||...++.+.-.++--..+....++.
T Consensus 338 kfsfqe~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippg 413 (448)
T KOG0195|consen 338 KFSFQEV----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPG 413 (448)
T ss_pred eeeeecc----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCC
Confidence 3333222 22457899999998776644 5799999999999999999999999998888887777788888889
Q ss_pred CCHHHHHHHHHhcccCCCCCCCHHhhh
Q 023270 241 ISAEAKHLISRLLVKDSSKRLSLQKIM 267 (284)
Q Consensus 241 ~~~~l~~li~~~l~~~p~~Rps~~~il 267 (284)
++..+..|++-|++.||-+||.+.+++
T Consensus 414 is~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 414 ISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 999999999999999999999998775
No 416
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-25 Score=193.03 Aligned_cols=240 Identities=35% Similarity=0.627 Sum_probs=200.3
Q ss_pred eeccCCCeEEEEEEEe---cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEEeec
Q 023270 26 PLGKGKFGRVYLVREV---ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~---~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~e~~ 101 (284)
.+|+|.+|.|+++... ..++-|+.|+..+......... .-..+-.++..++ |+.++++...+..++..+++.++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 3789999999977543 3466688888765544332222 3345556677776 999999999999999999999999
Q ss_pred CCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCCCccccCCCc
Q 023270 102 HRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLD 181 (284)
Q Consensus 102 ~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 181 (284)
.++.|...+.....++......+...++-++.++|+.|++|+|+|++||+++.+|++++.|||.+......... +|+..
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-cgt~e 158 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-CGTYE 158 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-ccchh
Confidence 99999988888888888888899999999999999999999999999999999999999999998554333222 88999
Q ss_pred ccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 023270 182 YLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRL 261 (284)
Q Consensus 182 y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 261 (284)
|+|||+.+ .....+|.||+|+++++++||..||.. ++...+++.....+. .++..+++++.+++..+|.+|.
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~--~l~~~a~~~~~~l~~r~p~nrL 230 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR--ELSAEARSLFRQLFKRNPENRL 230 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch--hhhHHHHHHHHHHHhhCHHHHh
Confidence 99999998 678899999999999999999999998 777777775544444 7899999999999999999998
Q ss_pred C-----HHhhhcCcccccc
Q 023270 262 S-----LQKIMEHPWIIKN 275 (284)
Q Consensus 262 s-----~~~il~~~~~~~~ 275 (284)
- ..++++|+||+.-
T Consensus 231 g~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 231 GAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ccCcchhHHHhccchheee
Confidence 4 5899999999864
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=8.3e-24 Score=165.83 Aligned_cols=142 Identities=19% Similarity=0.205 Sum_probs=111.6
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHH-----------------------HHHHHHHHHHHHHhCCCCc
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYK-----------------------IQHQLRREMEIQSSLRHPN 80 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~h~~ 80 (284)
...||+|++|.||+|.+. +|++||+|++......... .......|++.+..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 568999999999999986 8999999998654211100 1123345889999998887
Q ss_pred ccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCCeEecCCCCEE
Q 023270 81 ILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYC-HENHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 81 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~l-h~~gi~H~dl~p~nil~~~~~~~~ 159 (284)
+.....+... ..++||||++++++.........++...+..++.|++.+|.++ |+.|++|+||||+||+++ ++.++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 7544433222 2389999999877766555557889999999999999999999 799999999999999998 58899
Q ss_pred Eeeccccccc
Q 023270 160 IGDFGWSVQS 169 (284)
Q Consensus 160 l~d~~~~~~~ 169 (284)
|+|||++...
T Consensus 158 LiDFG~a~~~ 167 (190)
T cd05147 158 IIDVSQSVEH 167 (190)
T ss_pred EEEccccccC
Confidence 9999998644
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=2.8e-22 Score=157.65 Aligned_cols=143 Identities=17% Similarity=0.183 Sum_probs=112.6
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH-----------------------HHHHHHHHHHHHHHHHhCCCC
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE-----------------------KYKIQHQLRREMEIQSSLRHP 79 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~l~h~ 79 (284)
+.+.||+|++|.||+|.+. +|+.||||++...... ..........|.+.+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4578999999999999987 8999999998654211 011123346788899999998
Q ss_pred cccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCE
Q 023270 80 NILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 80 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~ 158 (284)
++.....+.... .++||||++++++.........++...+..++.+++.++.++|. .|++|+||+|+||+++ ++.+
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 876555544333 48999999887554443344567889999999999999999999 9999999999999998 8999
Q ss_pred EEeeccccccc
Q 023270 159 KIGDFGWSVQS 169 (284)
Q Consensus 159 ~l~d~~~~~~~ 169 (284)
+|+|||++...
T Consensus 157 ~liDFG~a~~~ 167 (190)
T cd05145 157 YIIDVSQAVEL 167 (190)
T ss_pred EEEEcccceec
Confidence 99999998544
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.89 E-value=3.2e-23 Score=188.94 Aligned_cols=220 Identities=32% Similarity=0.603 Sum_probs=176.3
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFL 96 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~ 96 (284)
.-.+|..++.|..|++|.||.++++.+.+++|+|+ .+..... + ||+.+.+ ..++
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lil-------R------------nilt~a~------npfv 134 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLIL-------R------------NILTFAG------NPFV 134 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhh-------h------------ccccccC------Ccce
Confidence 34689999999999999999999999999999944 2222111 1 1222222 2233
Q ss_pred EEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCC-----
Q 023270 97 ILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRS----- 171 (284)
Q Consensus 97 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~----- 171 (284)
| |+=...+++.++++.+. +.+++|||..||+|+|++|+|.+++.=|++|+.|||++....-
T Consensus 135 v------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 135 V------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred e------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 3 45555666666666554 7789999999999999999999999999999999998622110
Q ss_pred -------------CCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCC
Q 023270 172 -------------KRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSA 238 (284)
Q Consensus 172 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
....-+|+|.|.|||+...+.|....|.|++|+++|+++.|..||.+.+++++..........++-.
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 0122368999999999999999999999999999999999999999999999999988876666554
Q ss_pred -CCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCccccccC
Q 023270 239 -PSISAEAKHLISRLLVKDSSKRL---SLQKIMEHPWIIKNA 276 (284)
Q Consensus 239 -~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~~~~~~~~~ 276 (284)
+..+++++++++++|..+|..|. .+-++.+|+||+..+
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 36899999999999999999997 778899999999875
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.1e-23 Score=172.37 Aligned_cols=252 Identities=25% Similarity=0.419 Sum_probs=176.4
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCC-----------------------------------ceEEEEehhhh
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESK-----------------------------------HPVALKIIFKE 55 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~-----------------------------------~~v~iK~~~~~ 55 (284)
....++.+.+|.|..-||.|.-+.||.+....++ -+.|||.+..-
T Consensus 149 r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~ 228 (598)
T KOG4158|consen 149 RIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNF 228 (598)
T ss_pred hhhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccc
Confidence 3345778889999999999999999988765421 12345544221
Q ss_pred hH--HHHHHHHHHHHHHH--------------HHHh--------CCCCcccceeeEEe----------------------
Q 023270 56 QI--EKYKIQHQLRREME--------------IQSS--------LRHPNILRLYGWFH---------------------- 89 (284)
Q Consensus 56 ~~--~~~~~~~~~~~~~~--------------~~~~--------l~h~~i~~~~~~~~---------------------- 89 (284)
.. .....++.+-+|+- ..+. -+||||+++...|.
T Consensus 229 ~~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~ 308 (598)
T KOG4158|consen 229 EHDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWY 308 (598)
T ss_pred ccCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceec
Confidence 11 12222333333321 1111 24999999988764
Q ss_pred -----cCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC--CC--CEEE
Q 023270 90 -----DDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH--EG--RLKI 160 (284)
Q Consensus 90 -----~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~--~~--~~~l 160 (284)
.+..+|+||..++. +|..++-.+ ..+.....-++.|+++|+.|||++|+.|+|+|.+||++.- |+ ++.+
T Consensus 309 p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVv 386 (598)
T KOG4158|consen 309 PSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVV 386 (598)
T ss_pred ccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEE
Confidence 23468999999874 999988664 4577778889999999999999999999999999999943 33 5889
Q ss_pred eecccccccC---------CCCccccCCCcccCccccCCCCC------CchhhHhhHHHHHHHHHhCCCCCCCCChHHHH
Q 023270 161 GDFGWSVQSR---------SKRHTMCGTLDYLAPEMVENKEH------DYAVDNWTLGILCYEFLYGAPPFEAESQKDTF 225 (284)
Q Consensus 161 ~d~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~------~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~ 225 (284)
.|||.+.-.. +......|.-..+|||+.+..+- -.++|.|+.|.+.||+++...||-......+-
T Consensus 387 aDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~ 466 (598)
T KOG4158|consen 387 ADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLD 466 (598)
T ss_pred cccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheec
Confidence 9999652221 11123345667899999864332 24899999999999999999999763332221
Q ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 023270 226 RRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQ 264 (284)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 264 (284)
..-.+...-+..++.+++.+++++..+|+.||++|+|..
T Consensus 467 ~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 467 TRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred hhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 122222333455668999999999999999999999854
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=3.8e-22 Score=184.45 Aligned_cols=199 Identities=24% Similarity=0.340 Sum_probs=165.4
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecC
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDD 91 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~ 91 (284)
+..++....|.|.+.||.|+||.||.|.+.. ++.||+|+=.....++.....+++..++ .. --+.|..+.....-.
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~--~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQ--MLPSIMHISSAHVFQ 766 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hh--hhcchHHHHHHHccC
Confidence 4456777889999999999999999999877 9999999988888777665556555544 11 134456666666666
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-------CCCEEEeecc
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-------EGRLKIGDFG 164 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-------~~~~~l~d~~ 164 (284)
+..++|+||.+.|+|.+++...+..++.....+..|++..+..||..||+||||||+|+|+.. ..-++|+|||
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 778999999999999999998888999999999999999999999999999999999999953 2359999999
Q ss_pred cccccC-----CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCC
Q 023270 165 WSVQSR-----SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAP 214 (284)
Q Consensus 165 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~ 214 (284)
.+.++. ......+++-.+-.+|...|..++...|.|.++.+++.|+.|+.
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 884432 22334567888999999999999999999999999999998863
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=5.5e-21 Score=148.85 Aligned_cols=185 Identities=20% Similarity=0.237 Sum_probs=137.9
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHH-HHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKI-QHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~-~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+.+...|+.|+||+|+.+.. .+.+++.+.+.......... ...+++|+++++++. ++++++++++ +..+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 45678999999999997764 77788888876555443221 235789999999995 4788888886 3469999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC-CCCCeEecCCCCEEEeecccccccCCCCc---
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDI-KPENLLLDHEGRLKIGDFGWSVQSRSKRH--- 174 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl-~p~nil~~~~~~~~l~d~~~~~~~~~~~~--- 174 (284)
||+.|.+|...... . ...++.+++.++.++|++|++|+|| +|+||+++.++.++|+|||++........
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 99998888654321 1 2357789999999999999999999 79999999999999999999864433221
Q ss_pred -------------cccCCCcccCccccCCC-CCC-chhhHhhHHHHHHHHHhCCCCCCC
Q 023270 175 -------------TMCGTLDYLAPEMVENK-EHD-YAVDNWTLGILCYEFLYGAPPFEA 218 (284)
Q Consensus 175 -------------~~~~~~~y~aPE~~~~~-~~~-~~~Di~slG~il~~l~tg~~p~~~ 218 (284)
....++.++.|+...-- ..+ ...+.++.|+.+|.++|+..+...
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 11135556666654322 233 567888999999999998877643
No 423
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.6e-20 Score=163.03 Aligned_cols=195 Identities=25% Similarity=0.392 Sum_probs=155.7
Q ss_pred HhCCCCcccceeeEEecCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCCCCeE
Q 023270 74 SSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTNALAYCHENHV-IHRDIKPENLL 151 (284)
Q Consensus 74 ~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~~l~~lh~~gi-~H~dl~p~nil 151 (284)
+.+.|.|+.++++.+.++...++|.+||+.|+|.+.+... ..++......++++++.|+.|+|..-+ +||.+++.|.+
T Consensus 2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl 81 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL 81 (484)
T ss_pred cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence 5678999999999999999999999999999999999884 578999999999999999999998865 99999999999
Q ss_pred ecCCCCEEEeecccccccCC-----CCccccCCCcccCccccCCCC-------CCchhhHhhHHHHHHHHHhCCCCCCCC
Q 023270 152 LDHEGRLKIGDFGWSVQSRS-----KRHTMCGTLDYLAPEMVENKE-------HDYAVDNWTLGILCYEFLYGAPPFEAE 219 (284)
Q Consensus 152 ~~~~~~~~l~d~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~-------~~~~~Di~slG~il~~l~tg~~p~~~~ 219 (284)
++....+||+|||+...... .........-|.|||.+.... .+.+.|+||+|++++++++...||...
T Consensus 82 vd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~ 161 (484)
T KOG1023|consen 82 VDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLR 161 (484)
T ss_pred eeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccc
Confidence 99999999999998744432 111112234589999987642 467899999999999999999999652
Q ss_pred ----ChHHHHHHHHhcCCCCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q 023270 220 ----SQKDTFRRIMKVDLSFPSA-----PSISAEAKHLISRLLVKDSSKRLSLQKIME 268 (284)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 268 (284)
...++...+.++......+ ..+++++..++..||..+|.+||+++++-.
T Consensus 162 ~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 162 NLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred cccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 3334555544422211111 134567999999999999999999998754
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.84 E-value=2.2e-20 Score=151.35 Aligned_cols=150 Identities=19% Similarity=0.201 Sum_probs=116.1
Q ss_pred cccccCcEeeeeeccCCCeEEEEEE-EecCCceEEEEehhhhhHH---------------------HHHHHHHHHHHHHH
Q 023270 15 EWSLQDFEIGRPLGKGKFGRVYLVR-EVESKHPVALKIIFKEQIE---------------------KYKIQHQLRREMEI 72 (284)
Q Consensus 15 ~~~~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~v~iK~~~~~~~~---------------------~~~~~~~~~~~~~~ 72 (284)
-.+..-|++.+.||.|++|.||+|. +..+|..||+|++...... .......+..|+..
T Consensus 24 ~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 24 LNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred HhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 3344568999999999999999998 6678999999998653210 00122346688899
Q ss_pred HHhCCCCc--ccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCCCC
Q 023270 73 QSSLRHPN--ILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENH-VIHRDIKPEN 149 (284)
Q Consensus 73 ~~~l~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~g-i~H~dl~p~n 149 (284)
+..+.+.+ +.++++. ...++||||+++.++.........+....+..++.|++.++.+||..| ++|+||+|+|
T Consensus 104 L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N 179 (237)
T smart00090 104 LQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN 179 (237)
T ss_pred HHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence 98887533 3333432 235899999998888766544455677778899999999999999999 9999999999
Q ss_pred eEecCCCCEEEeeccccccc
Q 023270 150 LLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 150 il~~~~~~~~l~d~~~~~~~ 169 (284)
|+++ ++.++|+|||.+...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9998 889999999987543
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=8e-19 Score=140.48 Aligned_cols=138 Identities=19% Similarity=0.285 Sum_probs=114.9
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-----HHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEE
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-----EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
++.||+|++|.||++.. .+..+++|+...... ........+.+|+..+..+.|+++..+..++...+..+++|
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999986 677899998653221 22223356778999999999999888887777778889999
Q ss_pred eecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 99 EYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 99 e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
||+++++|.+++..... ....++.+++.++.++|..|++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998876432 7889999999999999999999999999999998 88999999998744
No 426
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=142.97 Aligned_cols=135 Identities=22% Similarity=0.381 Sum_probs=105.4
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-----CCCcccceeeEEecCC---
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-----RHPNILRLYGWFHDDE--- 92 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-----~h~~i~~~~~~~~~~~--- 92 (284)
+.-.+.||+|+++.||. +..++.. +||++...... ..+.+.+|+.+++.+ .||||++++++++.+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 34467899999999995 6566555 69988553222 235788999999999 5799999999998763
Q ss_pred eEE-EEEee--cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCccccCCCCCCeEecCC----CCEEEeecc
Q 023270 93 RIF-LILEY--AHRGELYRELRKHRRFTEQQAATYIASLTNAL-AYCHENHVIHRDIKPENLLLDHE----GRLKIGDFG 164 (284)
Q Consensus 93 ~~~-~v~e~--~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l-~~lh~~gi~H~dl~p~nil~~~~----~~~~l~d~~ 164 (284)
..+ +|+|| +.+++|.+++++. .+++. ..++.+++.++ .|||+++|+|+||||+||+++.. +.++|+|++
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 434 78999 4478999999764 45555 35677888777 99999999999999999999743 379999954
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.79 E-value=5.2e-20 Score=157.42 Aligned_cols=174 Identities=24% Similarity=0.403 Sum_probs=136.2
Q ss_pred eEEEEEeecCCCchHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 93 RIFLILEYAHRGELYRELRKHR---RFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 93 ~~~~v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
++|+.|++|...+|.+|+.... ..+....+.++.|++.++.| +|.+|+|++|.||++..++.++|+|||+.+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 5899999999999999997543 46788889999999999999 99999999999999999999999999997544
Q ss_pred CCC---------CccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCC-CCChHHHHHHHHhcCCCCCCCC
Q 023270 170 RSK---------RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFE-AESQKDTFRRIMKVDLSFPSAP 239 (284)
Q Consensus 170 ~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
... .....|+..|++||.+.+..++.++|||+||+++++|++. |. ..........+..+.+++....
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~T~~er~~t~~d~r~g~ip~~~~~ 483 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FSTQFERIATLTDIRDGIIPPEFLQ 483 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hccHHHHHHhhhhhhcCCCChHHhh
Confidence 332 2445689999999999999999999999999999999862 11 1122223333444433322322
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q 023270 240 SISAEAKHLISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
+.| +-..|+.+++.+.|.+||++.+.--|+|.+
T Consensus 484 d~p-~e~~ll~~lls~~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 484 DYP-EEYTLLQQLLSPSPEERPSAIEVALHEFLQ 516 (516)
T ss_pred cCc-HHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence 333 346899999999999999888777777653
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.79 E-value=2.8e-18 Score=136.06 Aligned_cols=133 Identities=16% Similarity=0.247 Sum_probs=108.0
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhh-----HHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEee
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQ-----IEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
.||+|++|.||++.. ++..+++|...... .+.......+.+|+++++.+.++++..+..++...+..+++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999984 66889999864322 12222346778899999999988776666666667778999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+++++|.+.+..... .++.+++.+|.++|+.|++|+|++|+||+++ ++.++++|||.+..
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999988755321 7889999999999999999999999999998 89999999998643
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=2.8e-18 Score=135.97 Aligned_cols=138 Identities=22% Similarity=0.323 Sum_probs=106.4
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHH-------------------HHHHHHHHHHHHHHHhCCCCc-
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEK-------------------YKIQHQLRREMEIQSSLRHPN- 80 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~h~~- 80 (284)
|.+.+.||.|++|.||++... ++..|+||++....... .........|+..+..+.+.+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888999999999999999874 78999999865422100 011223567788888887764
Q ss_pred -ccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEE
Q 023270 81 -ILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 81 -i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~ 159 (284)
+..+++ ....++||||+++++|...... .....++.+++.++.++|..|++|+||+|+||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 344433 2345899999999888765421 34567889999999999999999999999999999999999
Q ss_pred Eeeccccccc
Q 023270 160 IGDFGWSVQS 169 (284)
Q Consensus 160 l~d~~~~~~~ 169 (284)
|+|||.+...
T Consensus 166 liDfg~~~~~ 175 (198)
T cd05144 166 IIDWPQMVST 175 (198)
T ss_pred EEECCccccC
Confidence 9999987443
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=1.2e-17 Score=151.28 Aligned_cols=138 Identities=17% Similarity=0.233 Sum_probs=110.5
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhh-----hHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKE-----QIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERI 94 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~ 94 (284)
.|...+.||+|+||+||++.+... .+++|+.... ........+.+.+|+++++.++|++++.+..+...++..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 345688999999999999886443 3444432111 112223346788999999999999998888777777788
Q ss_pred EEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 95 FLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
++||||+++++|.+++. ....++.+++.++.+||+.|++|||++|+||++ .++.++|+|||++..
T Consensus 412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999998875 346789999999999999999999999999999 678999999998744
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=8.8e-20 Score=165.10 Aligned_cols=257 Identities=30% Similarity=0.489 Sum_probs=206.4
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCce-EEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeE
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHP-VALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERI 94 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~ 94 (284)
....|.+.+.||.|.++.+-.+....+... ++.|.+.... ........+..+..+-+.+. |.|++.+++...+.+..
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccc
Confidence 377899999999999999998877555444 4555553332 22333456666777777776 99999999999999999
Q ss_pred EEEEeecCCCchHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCCeEecCCC-CEEEeecccccccC
Q 023270 95 FLILEYAHRGELYREL-RKHR-RFTEQQAATYIASLTNALAYCH-ENHVIHRDIKPENLLLDHEG-RLKIGDFGWSVQSR 170 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l-~~~~-~l~~~~~~~i~~~i~~~l~~lh-~~gi~H~dl~p~nil~~~~~-~~~l~d~~~~~~~~ 170 (284)
++..++..++++.+.+ .... ..+...+...+.|+..++.|+| ..++.|+|++|+|.+++..+ ..++.|||++....
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999999999999888 5554 6677888899999999999999 99999999999999999999 99999999985443
Q ss_pred C-C-----CccccC-CCcccCccccCCCC-CCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHH-HHhc--CCCCCCCC
Q 023270 171 S-K-----RHTMCG-TLDYLAPEMVENKE-HDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRR-IMKV--DLSFPSAP 239 (284)
Q Consensus 171 ~-~-----~~~~~~-~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~-~~~~--~~~~~~~~ 239 (284)
. . .....| ++.|.|||.+.+.. ..+..|+||.|+++..+++|..||........... .... ......+.
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWN 256 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccc
Confidence 3 1 123456 89999999998854 46789999999999999999999977655543222 2221 22344556
Q ss_pred CCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 240 SISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 240 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
.++....+++..++..+|..|.+.+++-.++|+..
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cCChhhhhcccccccCCchhccccccccccccccc
Confidence 78899999999999999999999999999999988
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.73 E-value=4e-17 Score=128.11 Aligned_cols=139 Identities=22% Similarity=0.335 Sum_probs=96.7
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHH---------------------HHHHHHHHHhCCCCc-
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQ---------------------LRREMEIQSSLRHPN- 80 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~h~~- 80 (284)
+.+.||+|++|+||+|.+. ++..|+||++............. ...+...+..+.+.+
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999876 78999999976533221111111 134455555554332
Q ss_pred -ccceeeEEecCCeEEEEEeecCCCchHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCC
Q 023270 81 -ILRLYGWFHDDERIFLILEYAHRGELYR-ELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGR 157 (284)
Q Consensus 81 -i~~~~~~~~~~~~~~~v~e~~~~~~L~~-~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~ 157 (284)
+.++++. ...++||||++++.+.. .+.... .. ..+..++.+++.++.++|. .|++|+||+|+||+++ ++.
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc
Confidence 3333332 24589999998843321 121111 11 6678899999999999999 9999999999999999 999
Q ss_pred EEEeeccccccc
Q 023270 158 LKIGDFGWSVQS 169 (284)
Q Consensus 158 ~~l~d~~~~~~~ 169 (284)
++++|||.+...
T Consensus 153 ~~liDfg~a~~~ 164 (187)
T cd05119 153 VYIIDVPQAVEI 164 (187)
T ss_pred EEEEECcccccc
Confidence 999999987433
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=2.5e-16 Score=127.86 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=103.1
Q ss_pred eeec-cCCCeEEEEEEEecCCceEEEEehhhhhH----------HHHHHHHHHHHHHHHHHhCCCCcc--cceeeEEecC
Q 023270 25 RPLG-KGKFGRVYLVREVESKHPVALKIIFKEQI----------EKYKIQHQLRREMEIQSSLRHPNI--LRLYGWFHDD 91 (284)
Q Consensus 25 ~~lg-~g~~~~v~~~~~~~~~~~v~iK~~~~~~~----------~~~~~~~~~~~~~~~~~~l~h~~i--~~~~~~~~~~ 91 (284)
..|| .||.|+||.+.. .+..+++|.+..... .+......+.+|+.++..+.|+++ +.++++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4576 899999998876 367899988743221 111233567889999999998775 5666654332
Q ss_pred -C---eEEEEEeecCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 92 -E---RIFLILEYAHR-GELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 92 -~---~~~~v~e~~~~-~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
+ ..++|+|++++ .+|.+++.. ..++.. .+.+++.++.+||+.|++|+||+|.|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 2 23599999986 688887765 345544 3578999999999999999999999999999999999999987
Q ss_pred cc
Q 023270 167 VQ 168 (284)
Q Consensus 167 ~~ 168 (284)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 43
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.67 E-value=4.7e-16 Score=117.34 Aligned_cols=131 Identities=24% Similarity=0.289 Sum_probs=109.0
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC--CcccceeeEEecCCeEEEEEee
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH--PNILRLYGWFHDDERIFLILEY 100 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h--~~i~~~~~~~~~~~~~~~v~e~ 100 (284)
+++.||.|.++.||++...+ ..+++|.+..... ...+.+|+..+..+.+ .++.+++.+...++..++++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 56789999999999999744 7899999865432 2456778888888876 5888888888877889999999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN---HVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~---gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
+++.++..+ +......++.+++.++..+|.. +++|+|++|+||+++..+.++++||+.+.
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 988777654 4566678889999999999985 79999999999999998999999999764
No 435
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.66 E-value=4.5e-15 Score=130.97 Aligned_cols=166 Identities=18% Similarity=0.369 Sum_probs=130.9
Q ss_pred EEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCC
Q 023270 37 LVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRF 116 (284)
Q Consensus 37 ~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l 116 (284)
.+..+.++.++.|.+.....- .....+.+.++.++.++||||+++++.++..+.+|+|+|.+. .|..++++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh---
Confidence 456677889999888865543 344567888999999999999999999999999999999984 677777664
Q ss_pred CHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCCeEecCCCCEEEeecccccccCCCC---ccccCCCcccCccccCCCC
Q 023270 117 TEQQAATYIASLTNALAYCH-ENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR---HTMCGTLDYLAPEMVENKE 192 (284)
Q Consensus 117 ~~~~~~~i~~~i~~~l~~lh-~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~ 192 (284)
+.......+.||+.||.+|| +.+++||||.-..|+++..|.++|++|.++....... ........|..|+......
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc
Confidence 36677788899999999997 6789999999999999999999999999874443322 2222233466666543222
Q ss_pred CCchhhHhhHHHHHHHHHhC
Q 023270 193 HDYAVDNWTLGILCYEFLYG 212 (284)
Q Consensus 193 ~~~~~Di~slG~il~~l~tg 212 (284)
-..|.|.||+++++++.|
T Consensus 182 --~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cchhhhhHHHHHHHHhCc
Confidence 356999999999999988
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=1.6e-16 Score=138.42 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=192.3
Q ss_pred ccccccCcEeeeeecc--CCCeEEEEEEE--ecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEE
Q 023270 14 REWSLQDFEIGRPLGK--GKFGRVYLVRE--VESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWF 88 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~--g~~~~v~~~~~--~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~ 88 (284)
..+..+.+.+.+.+|. |.+|.+|.+.- ..++..+++|.-+............+ +++..-+.+ .|++.++.+..+
T Consensus 109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~-~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKL-REFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcccccccc-chhhcccccCccccccccCccc
Confidence 3455667889999999 99999998887 77888999998433222111111222 333333344 388999989999
Q ss_pred ecCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHH----HHHHHHhCCccccCCCCCCeEecCC-CCEEEee
Q 023270 89 HDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTN----ALAYCHENHVIHRDIKPENLLLDHE-GRLKIGD 162 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~----~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d 162 (284)
...+..|+-+|.|. .+|..+...- ..++...++..+.+... |+.++|..+++|-|++|.||++..+ ...+++|
T Consensus 188 e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 188 EGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCC
Confidence 99999999999997 5777766554 45889999999999999 9999999999999999999999999 8899999
Q ss_pred cccccccCCCC--------ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC
Q 023270 163 FGWSVQSRSKR--------HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLS 234 (284)
Q Consensus 163 ~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 234 (284)
|++........ ....+...|++||.. ++.++..+|+|++|.++.+..++..+....-. ..+.++....+.
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~r~~~ip 344 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQLRQGYIP 344 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCC-CCccccccccCc
Confidence 99875554333 122466779999986 55678899999999999998877655432200 111111222223
Q ss_pred CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 235 FPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 235 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
.......+.++...+.+|++.+|..|++++.+++|+++...
T Consensus 345 ~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 33333566778889999999999999999999999998754
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1e-15 Score=124.23 Aligned_cols=202 Identities=18% Similarity=0.322 Sum_probs=147.3
Q ss_pred HHHHHHHhCCCCcccceeeEEecCC-----eEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC
Q 023270 68 REMEIQSSLRHPNILRLYGWFHDDE-----RIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHEN 138 (284)
Q Consensus 68 ~~~~~~~~l~h~~i~~~~~~~~~~~-----~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~ 138 (284)
.....+-++-|.|+++++.|+.+.. ...+++||++.|++..+|++. ..+......+|+.||++||.|||..
T Consensus 116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 3344555567999999999986543 578899999999999999653 4688999999999999999999998
Q ss_pred C--ccccCCCCCCeEecCCCCEEEeeccccccc-------CCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHH
Q 023270 139 H--VIHRDIKPENLLLDHEGRLKIGDFGWSVQS-------RSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEF 209 (284)
Q Consensus 139 g--i~H~dl~p~nil~~~~~~~~l~d~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 209 (284)
. ++||++..+.|++..+|-+|++--...... ........+.++|.+||.=.....+-.+|||++|++..++
T Consensus 196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 5 899999999999999999998643332110 1122334567899999987666777899999999999998
Q ss_pred HhCCCCCCCCCh-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q 023270 210 LYGAPPFEAESQ-KDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIK 274 (284)
Q Consensus 210 ~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (284)
..+..--..... .+.-..+-...+.. -.+--+.++..|++..|..||++..++-||-.-+
T Consensus 276 ailEiq~tnseS~~~~ee~ia~~i~~l-----en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIANVIIGL-----ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred HHheeccCCCcceeehhhhhhhheeec-----cCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 866543222111 11111111111111 1233467899999999999999999999997654
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=2.4e-16 Score=144.65 Aligned_cols=263 Identities=28% Similarity=0.464 Sum_probs=209.8
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCe
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDER 93 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~ 93 (284)
...+..++.+.+.+..|.++.++.+.-..+++...+|+............+.++.+-.+.-...+|-++....-+.....
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 45678889999999999999999988888887777776543322211112222222222222334555555555566778
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC---
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--- 170 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~--- 170 (284)
.++++++..+++|...+.+.+..+.+.+...+..+..+..+||...+.|++++|.|.+...+++.++.+++......
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred cchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999999999999999998888888888889999999999999989999999999999999999999997320000
Q ss_pred -------------------------------CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCC
Q 023270 171 -------------------------------SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 219 (284)
Q Consensus 171 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~ 219 (284)
.......+++.|.+||...+......+|.|++|+++++.++|.+||+..
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0011234688999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHH---hhhcCccccccC
Q 023270 220 SQKDTFRRIMKVDLSFPSAP-SISAEAKHLISRLLVKDSSKRLSLQ---KIMEHPWIIKNA 276 (284)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~~p~~Rps~~---~il~~~~~~~~~ 276 (284)
+.....+.+......++..+ ..+.+.++++...+..+|.+|..+. ++-.|+||+..+
T Consensus 1039 tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 99999999998887777654 5788999999999999999999888 999999999864
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.59 E-value=3.1e-14 Score=110.93 Aligned_cols=143 Identities=13% Similarity=0.166 Sum_probs=101.9
Q ss_pred eeeeccCCCeEEEEEEEec------CCceEEEEehhhhh-----------------------HHHHHHHHHHHHHHHHHH
Q 023270 24 GRPLGKGKFGRVYLVREVE------SKHPVALKIIFKEQ-----------------------IEKYKIQHQLRREMEIQS 74 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~------~~~~v~iK~~~~~~-----------------------~~~~~~~~~~~~~~~~~~ 74 (284)
...||.|..+.||.|.... .+..+|+|++.... ........+.++|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999997543 35789999864211 011122234458888888
Q ss_pred hCCCC--cccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCCeE
Q 023270 75 SLRHP--NILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYC-HENHVIHRDIKPENLL 151 (284)
Q Consensus 75 ~l~h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~l-h~~gi~H~dl~p~nil 151 (284)
++... ++..++++ ..-++||||.++..+.........++......++.+++.++..+ |+.|++|||+++.||+
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 88654 44455543 45689999997643322222223456667778889999999998 8999999999999999
Q ss_pred ecCCCCEEEeecccccccCC
Q 023270 152 LDHEGRLKIGDFGWSVQSRS 171 (284)
Q Consensus 152 ~~~~~~~~l~d~~~~~~~~~ 171 (284)
+. ++.++++||+.+.....
T Consensus 158 ~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred EE-CCcEEEEECCCceeCCC
Confidence 96 57899999998865543
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.56 E-value=1.3e-14 Score=129.23 Aligned_cols=154 Identities=16% Similarity=0.223 Sum_probs=96.7
Q ss_pred hhcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHH-------------------------------
Q 023270 11 NRKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEK------------------------------- 59 (284)
Q Consensus 11 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~------------------------------- 59 (284)
....+-.+.+|+. +.||+|++|.|++|+...+|+.||||+..+.-...
T Consensus 112 G~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v 190 (537)
T PRK04750 112 GGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVV 190 (537)
T ss_pred CCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHH
Confidence 3344455778888 89999999999999998779999999986431100
Q ss_pred HHHHHHHHHHHHHHHhC----------CCCcccceeeEEec-CCeEEEEEeecCCCchHHHH--HhcCCCCHHHHHHHHH
Q 023270 60 YKIQHQLRREMEIQSSL----------RHPNILRLYGWFHD-DERIFLILEYAHRGELYREL--RKHRRFTEQQAATYIA 126 (284)
Q Consensus 60 ~~~~~~~~~~~~~~~~l----------~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~l--~~~~~l~~~~~~~i~~ 126 (284)
.+..+.+.+|+...+.. .+...+.+-.++.+ ....++||||++|+++.+.. ...+ .+.... +.
T Consensus 191 ~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~l---a~ 266 (537)
T PRK04750 191 AEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDMKLL---AE 266 (537)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCHHHH---HH
Confidence 01122333333333322 12222333333322 23567999999999997642 2222 222221 11
Q ss_pred HHH-HHHHHHHhCCccccCCCCCCeEecCCC----CEEEeeccccccc
Q 023270 127 SLT-NALAYCHENHVIHRDIKPENLLLDHEG----RLKIGDFGWSVQS 169 (284)
Q Consensus 127 ~i~-~~l~~lh~~gi~H~dl~p~nil~~~~~----~~~l~d~~~~~~~ 169 (284)
..+ .-+..+...|++|+|+||.||+++.+| .++++|||+....
T Consensus 267 ~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 267 RGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 111 113344569999999999999999988 9999999987433
No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.54 E-value=2.2e-13 Score=102.84 Aligned_cols=135 Identities=18% Similarity=0.251 Sum_probs=107.3
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEeh-----hhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEe
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKII-----FKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILE 99 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~-----~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e 99 (284)
..+++|+.+.++.+.. -+.++++|.= ..+..+..-......+|.+++..++--.+..+.=+..++....++||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4678999999998854 3334667653 33444555556777889999999988888888888888889999999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
|.+|..|.+.+... ...++..+=..+..||..||+|||++++||++..++ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99998888888775 246667777778999999999999999999996555 999999997533
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.53 E-value=1e-13 Score=122.05 Aligned_cols=149 Identities=19% Similarity=0.245 Sum_probs=97.6
Q ss_pred ccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH-------------------------------HHHH
Q 023270 16 WSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY-------------------------------KIQH 64 (284)
Q Consensus 16 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------~~~~ 64 (284)
-.+..|. .+.||+|++|.||+|+. .+|+.||||+......... +...
T Consensus 115 ~~F~~fd-~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 192 (437)
T TIGR01982 115 ELFAEFE-EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEK 192 (437)
T ss_pred HHHhhCC-CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHH
Confidence 3444555 36899999999999986 4789999999743211100 0001
Q ss_pred ------HHHHHHHHHHhC----CCCcccceeeEE-ecCCeEEEEEeecCCCchHHHHHhc-CCCCHHHHHHHHHHHHH-H
Q 023270 65 ------QLRREMEIQSSL----RHPNILRLYGWF-HDDERIFLILEYAHRGELYRELRKH-RRFTEQQAATYIASLTN-A 131 (284)
Q Consensus 65 ------~~~~~~~~~~~l----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~~i~~-~ 131 (284)
.+.+|++.+..+ ++.+-+.+-.++ ...+..++||||++|++|.+..... ...+ ...++..++. .
T Consensus 193 ~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~ 269 (437)
T TIGR01982 193 TLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSF 269 (437)
T ss_pred HHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHH
Confidence 123333333333 232223333333 2234579999999999998876532 1222 2345555555 4
Q ss_pred HHHHHhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 132 LAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 132 l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+..+|..|++|+|++|.||+++.++.++++|||++...
T Consensus 270 l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 270 LNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 67899999999999999999999999999999987544
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=2.8e-14 Score=124.54 Aligned_cols=254 Identities=21% Similarity=0.253 Sum_probs=187.2
Q ss_pred ccccccCcEeeeeeccCCCeEEEEEEEe-cCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC-CCCcccceeeEEecC
Q 023270 14 REWSLQDFEIGRPLGKGKFGRVYLVREV-ESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL-RHPNILRLYGWFHDD 91 (284)
Q Consensus 14 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~~i~~~~~~~~~~ 91 (284)
.-....+|..+..||.|.|+.++.+... .++..|++|...............+ .|..+...+ -|.+.+.....+...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl-~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSL-GEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcch-hhhhHhhHhhcccccCCCCCCcccc
Confidence 4456778999999999999999987655 6788899999876655554433333 233333333 477888877778888
Q ss_pred CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCC-CCEEEeecccccccC
Q 023270 92 ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE-GRLKIGDFGWSVQSR 170 (284)
Q Consensus 92 ~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~-~~~~l~d~~~~~~~~ 170 (284)
+..|+--|||+++++...+.....+++...+++..|++.++.++|+..++|+|++|+||++..+ +.-+++|++..+...
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~ 418 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLA 418 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccc
Confidence 8888999999998888777665678899999999999999999999999999999999999886 788888988764322
Q ss_pred CCCccccCCCccc--CccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 171 SKRHTMCGTLDYL--APEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 171 ~~~~~~~~~~~y~--aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
-........-++. ++.......+..+.|+++||.-+.+..++...-+..+. ...+..+. .+..+....++..+
T Consensus 419 ~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~--~p~~~~~~~~~q~~ 493 (524)
T KOG0601|consen 419 FSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGD--TPNLPGLKLQLQVL 493 (524)
T ss_pred eecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeeccc--ccCCCchHHhhhhh
Confidence 1111112223333 56666677788999999999999999988654332222 11222221 22233455788899
Q ss_pred HHHhcccCCCCCCCHHhhhcCcccc
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWII 273 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~ 273 (284)
..-++.+++..||++.++..|+-|-
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhcCCccccchhhhhhcccchhh
Confidence 9999999999999999998887553
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.47 E-value=1.9e-12 Score=97.55 Aligned_cols=145 Identities=19% Similarity=0.182 Sum_probs=113.0
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEe-----hhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEE
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKI-----IFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLI 97 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~-----~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v 97 (284)
.+..+.+|+.+.|+++.+ .|+.++||. +..+..+..-..+..++|++.+.++.--.|.-..=++.+...-.++
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567889999999998876 566666765 3445555556667888999999988877777777777788888999
Q ss_pred EeecCC-CchHHHHHhcC-CCCHHH-HHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC---CEEEeeccccccc
Q 023270 98 LEYAHR-GELYRELRKHR-RFTEQQ-AATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKIGDFGWSVQS 169 (284)
Q Consensus 98 ~e~~~~-~~L~~~l~~~~-~l~~~~-~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~---~~~l~d~~~~~~~ 169 (284)
|||.++ .++.+++.... .-..+. ...++.+|=+.+..||.++++||||..+||++.+++ .+.++|||++...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999986 46777776542 223333 368889999999999999999999999999997765 3589999997544
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=3.5e-13 Score=103.93 Aligned_cols=127 Identities=24% Similarity=0.294 Sum_probs=92.3
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc-cceeeEEecCCeEEEEEeecC
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI-LRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i-~~~~~~~~~~~~~~~v~e~~~ 102 (284)
++.++.|..+.||++.. .+..|++|........ ...+..|+..++.+.+.++ .+++... ....++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecC
Confidence 46789999999999885 4778999997543211 1234567777777755444 3444433 334589999999
Q ss_pred CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----cccCCCCCCeEecCCCCEEEeeccccc
Q 023270 103 RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHV-----IHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 103 ~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi-----~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
+.++... . ......+.+++.++..||..++ +|||++|+||+++ ++.++++||+.+.
T Consensus 75 G~~l~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTE----D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCccccc----c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 8877643 0 1113456789999999999885 9999999999998 7789999999863
No 446
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.37 E-value=2.4e-11 Score=102.58 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=152.3
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHh-CCCCcccceeeE------E-ecCCeE
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSS-LRHPNILRLYGW------F-HDDERI 94 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~-l~h~~i~~~~~~------~-~~~~~~ 94 (284)
..+.||+|+.+.+|..-.. ..-+.|++.....-.. . +....+.. -.||-+-.-+.+ . ..+...
T Consensus 15 ~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~---a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQ---A---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCccccCCccceeeecchh---hchhheeecCCCchHH---H---HHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3567999999999965432 2245677765543221 1 12222322 245433221111 1 122337
Q ss_pred EEEEeecCCCchHHHH-------HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 95 FLILEYAHRGELYREL-------RKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 95 ~~v~e~~~~~~L~~~l-------~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.++|+..++..--..+ .+.+..+++.+++..+.++.+...||.+|.+-||+.++|+|+++++.|.|+|-....
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccccee
Confidence 8888887654322222 223457899999999999999999999999999999999999999999999866432
Q ss_pred cc--CCCCccccCCCcccCccccC-----CCCCCchhhHhhHHHHHHHHHhC-CCCCCCC-------ChHH-HHH-----
Q 023270 168 QS--RSKRHTMCGTLDYLAPEMVE-----NKEHDYAVDNWTLGILCYEFLYG-APPFEAE-------SQKD-TFR----- 226 (284)
Q Consensus 168 ~~--~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~il~~l~tg-~~p~~~~-------~~~~-~~~----- 226 (284)
.. +.......|.+.|++||.-+ +..-+..+|.|.||+++++++.| ++||.+- ...+ .+.
T Consensus 166 i~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ 245 (637)
T COG4248 166 INANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFA 245 (637)
T ss_pred eccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceee
Confidence 22 22334567888999999765 33456789999999999998875 9999752 2222 111
Q ss_pred ---HHHhcC---CCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHh
Q 023270 227 ---RIMKVD---LSFPSAPSISAEAKHLISRLLVK--DSSKRLSLQK 265 (284)
Q Consensus 227 ---~~~~~~---~~~~~~~~~~~~l~~li~~~l~~--~p~~Rps~~~ 265 (284)
+...+. ...+....+++.++.+..+|+.. ++.-|||++.
T Consensus 246 ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 246 YASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred echhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 011111 11111235789999999999974 3568998875
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.34 E-value=6.6e-11 Score=102.19 Aligned_cols=212 Identities=18% Similarity=0.232 Sum_probs=154.6
Q ss_pred CCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEe----cCCeEEEEEeecCC-Cc
Q 023270 31 KFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFH----DDERIFLILEYAHR-GE 105 (284)
Q Consensus 31 ~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~----~~~~~~~v~e~~~~-~~ 105 (284)
--.+.|++....+|..|++|+++-...... ...-.-++.++++.|.|++++.+++. .+..+++|++|++. ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 456789999999999999999833222211 12234568889999999999999886 44579999999875 34
Q ss_pred hHHHH---------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccC
Q 023270 106 LYREL---------------RKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 106 L~~~l---------------~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
|.++- .++...++..+|.++.|+..||.++|+.|+.-.-|.|.+|+++.+-+++|+.+|......
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 54432 122346789999999999999999999999989999999999888899999998764333
Q ss_pred CCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCC-CCChHHH-HHHHHhcCCCCCCCCCCCHHHHHH
Q 023270 171 SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFE-AESQKDT-FRRIMKVDLSFPSAPSISAEAKHL 248 (284)
Q Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 248 (284)
... . + .-.--.+.|.-.||.+++.|.||..--. .....+. ++.+.. ..+.+++++
T Consensus 445 ~d~---------~--~---~le~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~---------~yS~D~rn~ 501 (655)
T KOG3741|consen 445 EDP---------T--E---PLESQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITT---------TYSTDLRNV 501 (655)
T ss_pred CCC---------C--c---chhHHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhh---------hhhHHHHHH
Confidence 221 0 0 0112346799999999999999854321 1222222 222222 578999999
Q ss_pred HHHhcccCCCCCCCHHhhhcC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEH 269 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~ 269 (284)
|......++++ -++++++.+
T Consensus 502 v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 502 VEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHHhcCccc-ccHHHHHHH
Confidence 99999999887 788888765
No 448
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=5.3e-13 Score=118.49 Aligned_cols=149 Identities=23% Similarity=0.428 Sum_probs=116.1
Q ss_pred HHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccccCCCCcc------------ccCCCcccCccccCCCCC
Q 023270 127 SLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHT------------MCGTLDYLAPEMVENKEH 193 (284)
Q Consensus 127 ~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~------------~~~~~~y~aPE~~~~~~~ 193 (284)
+.+.|+.++|.. +++|++|.|++|.++.++.+||+.|+++....++... ......|.|||++.+...
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~ 186 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN 186 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence 444899999976 8999999999999999999999999987554442211 112346999999999889
Q ss_pred CchhhHhhHHHHHHHHH-hCCCCCCCCChHHHHHH--HHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCc
Q 023270 194 DYAVDNWTLGILCYEFL-YGAPPFEAESQKDTFRR--IMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHP 270 (284)
Q Consensus 194 ~~~~Di~slG~il~~l~-tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~ 270 (284)
+.++|+||+|++++.++ .|+..+........+.. .......+..+..+|.++++=+.+++..++.-||++..++..|
T Consensus 187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ 266 (700)
T KOG2137|consen 187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIP 266 (700)
T ss_pred cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhccc
Confidence 99999999999999998 67776655433322222 2222223333457999999999999999999999999999999
Q ss_pred ccccc
Q 023270 271 WIIKN 275 (284)
Q Consensus 271 ~~~~~ 275 (284)
||++.
T Consensus 267 ff~D~ 271 (700)
T KOG2137|consen 267 FFSDP 271 (700)
T ss_pred ccCCc
Confidence 99986
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.26 E-value=3.7e-11 Score=96.68 Aligned_cols=139 Identities=17% Similarity=0.262 Sum_probs=99.5
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc--ccceeeEEecC---CeEEEEEe
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN--ILRLYGWFHDD---ERIFLILE 99 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~--i~~~~~~~~~~---~~~~~v~e 99 (284)
+.|+.|..+.+|++... +|..+++|........ .....+..|.+++..+.+.+ +.+++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 56899999999999874 3678999997553321 12346678888888887643 56677766553 36789999
Q ss_pred ecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 023270 100 YAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE------------------------------------------ 137 (284)
Q Consensus 100 ~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~------------------------------------------ 137 (284)
++++.++.+.+.. ..++..+...++.+++.++..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9998877665432 234555556666666666666652
Q ss_pred --------------CCccccCCCCCCeEecC--CCCEEEeeccccc
Q 023270 138 --------------NHVIHRDIKPENLLLDH--EGRLKIGDFGWSV 167 (284)
Q Consensus 138 --------------~gi~H~dl~p~nil~~~--~~~~~l~d~~~~~ 167 (284)
..++|||++|+||+++. ++.+.++||+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 24689999999999998 6778999999763
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.26 E-value=1.1e-10 Score=90.63 Aligned_cols=129 Identities=22% Similarity=0.342 Sum_probs=83.7
Q ss_pred EEEEEEecCCceEEEEehhh-----------------------hhHHHHHHHHHHHHHHHHHHhCCCCc--ccceeeEEe
Q 023270 35 VYLVREVESKHPVALKIIFK-----------------------EQIEKYKIQHQLRREMEIQSSLRHPN--ILRLYGWFH 89 (284)
Q Consensus 35 v~~~~~~~~~~~v~iK~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~h~~--i~~~~~~~~ 89 (284)
||.|.. .++..+|+|+... ...+........++|.+.|..+...+ +.+++++.
T Consensus 2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 676665 4666888887431 11233344578889999999998764 45555432
Q ss_pred cCCeEEEEEeecC--CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 90 DDERIFLILEYAH--RGELYRELRKHRRFTEQQAATYIASLTNALAY-CHENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 90 ~~~~~~~v~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~-lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.-++||||.+ |..+..+.... ++.+....++.+++..+.. +|..|++|||+++.||+++.+ .+.++|||.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qa 153 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQA 153 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcc
Confidence 3489999998 65665543332 1134556777888885444 689999999999999999877 9999999988
Q ss_pred cccCC
Q 023270 167 VQSRS 171 (284)
Q Consensus 167 ~~~~~ 171 (284)
.....
T Consensus 154 v~~~~ 158 (188)
T PF01163_consen 154 VDSSH 158 (188)
T ss_dssp EETTS
T ss_pred eecCC
Confidence 66543
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.23 E-value=9.4e-11 Score=93.97 Aligned_cols=142 Identities=20% Similarity=0.262 Sum_probs=105.0
Q ss_pred cEeeeeeccCCCeEEEEEEEecCCceEEEEehhhh-------------------hHHHHHHHHHHHHHHHHHHhCCCC--
Q 023270 21 FEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKE-------------------QIEKYKIQHQLRREMEIQSSLRHP-- 79 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~-------------------~~~~~~~~~~~~~~~~~~~~l~h~-- 79 (284)
+.+..+||-|..|.||.+.+. .|.++++|.-... ..+-.-.....++|.+.|..+...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456788999999999999874 7889999962110 011123356677889999888765
Q ss_pred cccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEE
Q 023270 80 NILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 80 ~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~ 159 (284)
.+.++++ .+.-.+|||+.++..|...- ++......++..|+..+...-..|++|||+++-||+++.+|.+.
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCccc----cccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 6666666 34679999999986665432 13455556667777777776789999999999999999999999
Q ss_pred EeecccccccCCC
Q 023270 160 IGDFGWSVQSRSK 172 (284)
Q Consensus 160 l~d~~~~~~~~~~ 172 (284)
++||-.+.....+
T Consensus 243 vIDwPQ~v~~~hp 255 (304)
T COG0478 243 VIDWPQAVPISHP 255 (304)
T ss_pred EEeCcccccCCCC
Confidence 9999877554433
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.22 E-value=5.7e-10 Score=91.81 Aligned_cols=135 Identities=14% Similarity=0.024 Sum_probs=93.7
Q ss_pred CCeEEEEEEEecCCceEEEEehhhhhHHH--HH------HHHHHHHHHHHHHhCCCCccc--ceeeEEec-----CCeEE
Q 023270 31 KFGRVYLVREVESKHPVALKIIFKEQIEK--YK------IQHQLRREMEIQSSLRHPNIL--RLYGWFHD-----DERIF 95 (284)
Q Consensus 31 ~~~~v~~~~~~~~~~~v~iK~~~~~~~~~--~~------~~~~~~~~~~~~~~l~h~~i~--~~~~~~~~-----~~~~~ 95 (284)
....|+++. -+|+.|.||......... .. -...+.+|.+.+..+...+|. .++.+++. ....+
T Consensus 34 ~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 34 EGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred CCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 333455554 356789999764333211 00 001356777777777544443 34555543 23578
Q ss_pred EEEeecCCC-chHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecC-------CCCEEEeeccc
Q 023270 96 LILEYAHRG-ELYRELRK--HRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDH-------EGRLKIGDFGW 165 (284)
Q Consensus 96 ~v~e~~~~~-~L~~~l~~--~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~-------~~~~~l~d~~~ 165 (284)
+|+|++++. +|.+++.. ....+......++.+++..+..||..|++|||++++|||++. +..+.|+||+-
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 999999875 78888754 234566778899999999999999999999999999999975 45799999997
Q ss_pred cc
Q 023270 166 SV 167 (284)
Q Consensus 166 ~~ 167 (284)
+.
T Consensus 192 ~~ 193 (268)
T PRK15123 192 AQ 193 (268)
T ss_pred cc
Confidence 63
No 453
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.10 E-value=2.3e-09 Score=84.30 Aligned_cols=144 Identities=17% Similarity=0.152 Sum_probs=94.1
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHH------HHHHHHHHHHhCCC---Cccc
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQH------QLRREMEIQSSLRH---PNIL 82 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~------~~~~~~~~~~~l~h---~~i~ 82 (284)
....|.-.+|.+.+++.......|.+.. .+++.+++|.............. ...+.+..+..+.. ....
T Consensus 24 l~~~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~ 101 (229)
T PF06176_consen 24 LGEKILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPA 101 (229)
T ss_pred HHHHHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccc
Confidence 3445677889999999999988888776 46789999998654432221111 11222332333322 2222
Q ss_pred ceeeEEe-----cCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC
Q 023270 83 RLYGWFH-----DDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR 157 (284)
Q Consensus 83 ~~~~~~~-----~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~ 157 (284)
.++-+.+ -....+++|||++|..|.+... +++ .+...+.+++..+|+.|++|||.+|+|++++.+ .
T Consensus 102 ~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~ 172 (229)
T PF06176_consen 102 DPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-G 172 (229)
T ss_pred cceeeeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-c
Confidence 2222221 2235678999999988876532 222 244567788999999999999999999999754 4
Q ss_pred EEEeecccc
Q 023270 158 LKIGDFGWS 166 (284)
Q Consensus 158 ~~l~d~~~~ 166 (284)
++++|++-.
T Consensus 173 i~iID~~~k 181 (229)
T PF06176_consen 173 IRIIDTQGK 181 (229)
T ss_pred EEEEECccc
Confidence 999998754
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.06 E-value=2.7e-09 Score=84.91 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhCCCCc--ccceeeEEecC----CeEEEEEeecCC-CchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 023270 64 HQLRREMEIQSSLRHPN--ILRLYGWFHDD----ERIFLILEYAHR-GELYRELRKHRRFTEQQAATYIASLTNALAYCH 136 (284)
Q Consensus 64 ~~~~~~~~~~~~l~h~~--i~~~~~~~~~~----~~~~~v~e~~~~-~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh 136 (284)
....+|...+..+...+ ..+++++.... ...++|+|+.++ .+|.+++.....++......++.+++..+..||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 34556666666664333 34555655442 245899999987 478988887555777888899999999999999
Q ss_pred hCCccccCCCCCCeEecCCC---CEEEeeccccc
Q 023270 137 ENHVIHRDIKPENLLLDHEG---RLKIGDFGWSV 167 (284)
Q Consensus 137 ~~gi~H~dl~p~nil~~~~~---~~~l~d~~~~~ 167 (284)
+.|++|+|++++|||+..++ .+.++||+-+.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 99999999999999999887 89999998654
No 455
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.01 E-value=7.3e-09 Score=82.38 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=97.2
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH---------------------HHHHHHHHHHHHHHhCCCCcc-
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY---------------------KIQHQLRREMEIQSSLRHPNI- 81 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~h~~i- 81 (284)
...|+.|..+.||+|.. .++..+|+|++......-. ....+..+|++.|.++...++
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34688999999999876 5678999999754332211 223455566666666654432
Q ss_pred -cceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeEecCCCCEE
Q 023270 82 -LRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE-NHVIHRDIKPENLLLDHEGRLK 159 (284)
Q Consensus 82 -~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~-~gi~H~dl~p~nil~~~~~~~~ 159 (284)
.+.+.+. .-.+||||.+......=....-++..+++..+..++++.+.-|-. .|++||||+.-|||+. ++.+.
T Consensus 132 vP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~ 206 (268)
T COG1718 132 VPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPY 206 (268)
T ss_pred CCCceeec----CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEE
Confidence 3334332 358999998653211111111233444678888899998888777 8999999999999998 89999
Q ss_pred EeecccccccCCC
Q 023270 160 IGDFGWSVQSRSK 172 (284)
Q Consensus 160 l~d~~~~~~~~~~ 172 (284)
++|++.++....+
T Consensus 207 iID~~QaV~~~hp 219 (268)
T COG1718 207 IIDVSQAVTIDHP 219 (268)
T ss_pred EEECccccccCCC
Confidence 9999998766543
No 456
>PRK09902 hypothetical protein; Provisional
Probab=99.00 E-value=6.8e-09 Score=81.35 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=95.7
Q ss_pred ccCCCeEEEEEEEecCCceEEEEehhhhhHHH---HHHHHHHHHHHHHHHhCCCCc--ccceeeEEe---cC--CeEEEE
Q 023270 28 GKGKFGRVYLVREVESKHPVALKIIFKEQIEK---YKIQHQLRREMEIQSSLRHPN--ILRLYGWFH---DD--ERIFLI 97 (284)
Q Consensus 28 g~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~~~~~~~~~~~l~h~~--i~~~~~~~~---~~--~~~~~v 97 (284)
|.||-|.|+.... .|+.+.+|.-......+ +.-...+.+|+..+..+...+ +.++. ++. .+ -.-++|
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 5688899997764 33468888753111000 112356778888887775433 34444 332 11 246889
Q ss_pred EeecCC-CchHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCC--EEEeecccc
Q 023270 98 LEYAHR-GELYRELRKH--RRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGR--LKIGDFGWS 166 (284)
Q Consensus 98 ~e~~~~-~~L~~~l~~~--~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~--~~l~d~~~~ 166 (284)
+|-.++ .+|.+++.+. .+.+......++.+++.++..||+.|+.|+|+.+.||+++.+|. +.++||.-+
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 997653 5788877653 34577888899999999999999999999999999999987777 999999854
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.70 E-value=3.2e-07 Score=73.94 Aligned_cols=132 Identities=18% Similarity=0.198 Sum_probs=81.1
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc--ccceeeEEecCCeEEEEEeecC
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN--ILRLYGWFHDDERIFLILEYAH 102 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~--i~~~~~~~~~~~~~~~v~e~~~ 102 (284)
..||+|..+.||+. .+..+++|...... . ...+.+|.+.++.+..-+ +.+++++...++...+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~----~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-D----KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-C----HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 56899999999973 24568899985422 1 234577888888876443 4667887777888899999998
Q ss_pred CCc-hH--------------HHHHh-------c--CCCCHHHHHHHH-H----------HHHHH-HHHHH----hCCccc
Q 023270 103 RGE-LY--------------RELRK-------H--RRFTEQQAATYI-A----------SLTNA-LAYCH----ENHVIH 142 (284)
Q Consensus 103 ~~~-L~--------------~~l~~-------~--~~l~~~~~~~i~-~----------~i~~~-l~~lh----~~gi~H 142 (284)
|.+ +. ..+.. . ...+......-+ . .+... ..+|. ....+|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 853 11 11111 0 011111111100 0 01111 11111 124689
Q ss_pred cCCCCCCeEecCCCCEEEeecccc
Q 023270 143 RDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 143 ~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
||++|.||+++.++ +.++||+.+
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a 180 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDF 180 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhc
Confidence 99999999999888 999999975
No 458
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.69 E-value=3.4e-07 Score=86.66 Aligned_cols=204 Identities=20% Similarity=0.212 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHhCCCCcccceeeEEecCCe----EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 023270 63 QHQLRREMEIQSSLRHPNILRLYGWFHDDER----IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN 138 (284)
Q Consensus 63 ~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~----~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 138 (284)
......|+..+....|+|+..++.|..+... ..+..++|+..++...+..-+..+....+.+..+++.++.++|+.
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 3445567778888899999999988765543 345567899999999998888999999999999999999999999
Q ss_pred CccccCCCCC---CeEecCCCCEEEe--ecccccccCCCCc--cccCCCcccCccccCCCCCCc--hhhHhhHHHHHHHH
Q 023270 139 HVIHRDIKPE---NLLLDHEGRLKIG--DFGWSVQSRSKRH--TMCGTLDYLAPEMVENKEHDY--AVDNWTLGILCYEF 209 (284)
Q Consensus 139 gi~H~dl~p~---nil~~~~~~~~l~--d~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~--~~Di~slG~il~~l 209 (284)
...|.-+..+ +.-.+..+.+..+ ||+.+........ ....+..+.+||.......+. ..|+|++|.....+
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~ 385 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL 385 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence 7666655555 4444555666666 7877654443332 223355677888776666554 47999999999998
Q ss_pred HhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccCC
Q 023270 210 LYGAPPFEAESQKDTFRRIMKVDLSFPSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNAN 277 (284)
Q Consensus 210 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (284)
..+..+-.. .......+.. ....+..+.+..|+..++++|+++.+++.|+|.+-..+
T Consensus 386 ~~~~~i~~~---~~~~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~ 442 (1351)
T KOG1035|consen 386 SQGEDISEK---SAVPVSLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTD 442 (1351)
T ss_pred hhcCccccc---ccchhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhchhcccccc
Confidence 876443221 1111111111 12227889999999999999999999999999876543
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.69 E-value=2.7e-07 Score=82.35 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=88.3
Q ss_pred eeeccCCCeEEEEEEEecCCceEEEEehhhhhHHH-------------------------------HHHHHH------HH
Q 023270 25 RPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEK-------------------------------YKIQHQ------LR 67 (284)
Q Consensus 25 ~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------~~~~~~------~~ 67 (284)
..|+.++-|.|++|+.. +|+.||||+..+.-... .+..+. +.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 67899999999999985 49999999843211100 011112 22
Q ss_pred HHHHHHHhC----CCCcccceeeEE-ecCCeEEEEEeecCCCchHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 023270 68 REMEIQSSL----RHPNILRLYGWF-HDDERIFLILEYAHRGELYREL--RKHRRFTEQQAATYIASLTNALAYCHENHV 140 (284)
Q Consensus 68 ~~~~~~~~l----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~l--~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi 140 (284)
+|...+.++ ++..-+.+-.++ +-.+...++|||++|..+.+.. +. ...+.+.+...+.++. +..+=..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCc
Confidence 222222222 122222222333 2234679999999998888774 44 3455444444333322 334445899
Q ss_pred cccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 141 IHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 141 ~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
+|+|.+|.||++..+|.+.+.|||.....
T Consensus 287 fHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 287 FHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred cccCCCccceEEecCCcEEEEcCcceecC
Confidence 99999999999999999999999986443
No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.43 E-value=2.8e-06 Score=75.86 Aligned_cols=139 Identities=15% Similarity=0.219 Sum_probs=84.4
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH----------------------------HHHHHHHHHHHHH----
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE----------------------------KYKIQHQLRREME---- 71 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~----------------------------~~~~~~~~~~~~~---- 71 (284)
.+.|+..+.|.|++|+... |+.||||+=++.-.. -.+..+.+..|+.
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 3679999999999999865 999999983211000 0011122222222
Q ss_pred ------HHHhCCCCc------ccceeeEEecCCeEEEEEeecCCCchHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 023270 72 ------IQSSLRHPN------ILRLYGWFHDDERIFLILEYAHRGELYRE--LRKHRRFTEQQAATYIASLTNALAYCHE 137 (284)
Q Consensus 72 ------~~~~l~h~~------i~~~~~~~~~~~~~~~v~e~~~~~~L~~~--l~~~~~l~~~~~~~i~~~i~~~l~~lh~ 137 (284)
..+.+.|-+ |.+++.. -.....++|||++|..+.+. +++.+ ++...+..-+.+... ..+=.
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i~~~l~~~~~--~qIf~ 319 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRG-ISPHDILNKLVEAYL--EQIFK 319 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcC-CCHHHHHHHHHHHHH--HHHHh
Confidence 222223333 2333322 23467999999999876544 44433 455544443333322 23345
Q ss_pred CCccccCCCCCCeEecC----CCCEEEeecccccc
Q 023270 138 NHVIHRDIKPENLLLDH----EGRLKIGDFGWSVQ 168 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~----~~~~~l~d~~~~~~ 168 (284)
.|++|+|=+|.||++++ ++.+.+.|+|+...
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 78999999999999984 56899999998643
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.42 E-value=3.8e-06 Score=68.69 Aligned_cols=74 Identities=20% Similarity=0.182 Sum_probs=48.9
Q ss_pred eccCCC-eEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcccceeeEEecCCeEEEEEeecCCC
Q 023270 27 LGKGKF-GRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNILRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 27 lg~g~~-~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
|..|.. +.||++.. .+..+++|...... ...+.+|+++++.+. +-.+.+++.+...++..++|||+.+|.
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 334444 78898864 34688899975432 124456777776664 234556777776666789999999887
Q ss_pred chHH
Q 023270 105 ELYR 108 (284)
Q Consensus 105 ~L~~ 108 (284)
++..
T Consensus 78 ~l~~ 81 (244)
T cd05150 78 PAAA 81 (244)
T ss_pred cHhH
Confidence 7653
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.42 E-value=1.2e-05 Score=64.85 Aligned_cols=78 Identities=26% Similarity=0.300 Sum_probs=52.2
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCC--cccceeeEEe---cCCeEEEEE
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHP--NILRLYGWFH---DDERIFLIL 98 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~--~i~~~~~~~~---~~~~~~~v~ 98 (284)
++.++.|..+.+|++.... ..+++|..... .....+..|..+++.+... .+.+++.... .....++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5678999999999998654 58999997554 1224555666666666433 3455665332 234579999
Q ss_pred eecCCCchHH
Q 023270 99 EYAHRGELYR 108 (284)
Q Consensus 99 e~~~~~~L~~ 108 (284)
+++++.++..
T Consensus 75 ~~i~g~~~~~ 84 (239)
T PF01636_consen 75 EYIPGRPLDD 84 (239)
T ss_dssp EEESSEEHHH
T ss_pred EEeccccccc
Confidence 9999877766
No 463
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.39 E-value=1e-05 Score=63.17 Aligned_cols=95 Identities=24% Similarity=0.300 Sum_probs=74.9
Q ss_pred HHHHHHHhCCC-CcccceeeEEecCCeEEEEEeecCCCchHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Q 023270 68 REMEIQSSLRH-PNILRLYGWFHDDERIFLILEYAHRGELYRE---LRKHRRFTEQQAATYIASLTNALAYCHE---NHV 140 (284)
Q Consensus 68 ~~~~~~~~l~h-~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~---l~~~~~l~~~~~~~i~~~i~~~l~~lh~---~gi 140 (284)
.|.-+++.+.+ +++++++|+|. .+++.|+.+.+++... +.+--..++..+..++.++++.+.+++. ..+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 46677777776 69999999882 3778999876655421 1111234899999999999999999997 346
Q ss_pred cccCCCCCCeEecCCCCEEEeecccc
Q 023270 141 IHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 141 ~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.-+|++|+|+-++.++.++++|....
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v 109 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDV 109 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhc
Confidence 67999999999999999999999875
No 464
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.28 E-value=1.2e-05 Score=60.93 Aligned_cols=131 Identities=19% Similarity=0.203 Sum_probs=92.7
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccc-eeeEEecCCeEEEEEee
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILR-LYGWFHDDERIFLILEY 100 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~-~~~~~~~~~~~~~v~e~ 100 (284)
++.+.|+.|+.|.||++.. .+..+++|+-..++ ....+..|.+++..+.-.++-+ ++.|. ..++.|||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~ 93 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEY 93 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhh
Confidence 4667899999999999986 45588888864432 2357788889888887666544 44433 23555999
Q ss_pred cCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC-CCCeEecCCCCEEEeecccccccC
Q 023270 101 AHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIK-PENLLLDHEGRLKIGDFGWSVQSR 170 (284)
Q Consensus 101 ~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~-p~nil~~~~~~~~l~d~~~~~~~~ 170 (284)
.+|.+|.+..... +. ..+..+++...-|-..||-|+.|+ |...++..++.+.|+||..++...
T Consensus 94 i~G~~L~~~~~~~---~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~ 157 (201)
T COG2112 94 IDGRPLGKLEIGG---DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK 157 (201)
T ss_pred hcCcchhhhhhcc---cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence 9988887765432 22 333456666677888899999986 566666677799999999886443
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=98.25 E-value=1.6e-05 Score=76.20 Aligned_cols=81 Identities=19% Similarity=0.308 Sum_probs=55.7
Q ss_pred eeeeeccCCCeEEEEEEEecCC--ceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCC-CCcc--cceeeEEecC---CeE
Q 023270 23 IGRPLGKGKFGRVYLVREVESK--HPVALKIIFKEQIEKYKIQHQLRREMEIQSSLR-HPNI--LRLYGWFHDD---ERI 94 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~~i--~~~~~~~~~~---~~~ 94 (284)
.++.++.|.++.+|++.....+ ..+++|+........ ....+.+|+++++.+. |.++ .+++.++.+. +..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 4677899999999998765433 468888864432111 1235778888998885 5554 6667766554 467
Q ss_pred EEEEeecCCCc
Q 023270 95 FLILEYAHRGE 105 (284)
Q Consensus 95 ~~v~e~~~~~~ 105 (284)
|+|||++++..
T Consensus 120 flVME~v~G~~ 130 (822)
T PLN02876 120 FYIMEYLEGRI 130 (822)
T ss_pred eEEEEecCCcc
Confidence 99999998754
No 466
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.25 E-value=1.1e-06 Score=72.83 Aligned_cols=138 Identities=18% Similarity=0.260 Sum_probs=97.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-------------------HHHHHHHHHHHHHHHHHhCCC--
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-------------------EKYKIQHQLRREMEIQSSLRH-- 78 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-------------------~~~~~~~~~~~~~~~~~~l~h-- 78 (284)
-+.+...||-|..+-||.+.+ ..|.+.++|.-..... |-.-..-...+|...|+.+..
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 367888999999999999886 5677888885321111 111222344567777777754
Q ss_pred CcccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCE
Q 023270 79 PNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 79 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~ 158 (284)
-.+.+.+++ +.-++|||+..+-+|...-. ...+..+...+...+.-|..+|++|||+.--||++..++.+
T Consensus 172 fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i 241 (465)
T KOG2268|consen 172 FPVPKPIDH----NRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI 241 (465)
T ss_pred CCCCCcccc----cceeeHHHhhcccceeeeee------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence 344555553 35789999998877764321 22334566677777888899999999999999999999999
Q ss_pred EEeecccccc
Q 023270 159 KIGDFGWSVQ 168 (284)
Q Consensus 159 ~l~d~~~~~~ 168 (284)
+++||-....
T Consensus 242 ~vIDFPQmvS 251 (465)
T KOG2268|consen 242 VVIDFPQMVS 251 (465)
T ss_pred EEeechHhhc
Confidence 9999986533
No 467
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.18 E-value=2.4e-05 Score=66.11 Aligned_cols=146 Identities=22% Similarity=0.240 Sum_probs=101.1
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhhhh-----------------------HHHHHHHHHHHHHHHHHHhCCC
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQ-----------------------IEKYKIQHQLRREMEIQSSLRH 78 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~h 78 (284)
.+-..|+.|..+.||.|.. .+|..+|||++..+- ....-..-+...|++.+.++..
T Consensus 147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3445688999999999875 567779999864111 1111223456678888888877
Q ss_pred CcccceeeEEecCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCCeEecCCCC
Q 023270 79 PNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCH-ENHVIHRDIKPENLLLDHEGR 157 (284)
Q Consensus 79 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh-~~gi~H~dl~p~nil~~~~~~ 157 (284)
.+|...--+... .-.+||+++....-..-....-.++...+..+..+++..+.-|- ..++||.||+--|+|+ .+|.
T Consensus 226 aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ 302 (520)
T KOG2270|consen 226 AGIPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGK 302 (520)
T ss_pred cCCCCCCceeee--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCE
Confidence 666554433322 34789999865433333334446777888888888887776654 5699999999999999 7899
Q ss_pred EEEeecccccccCC
Q 023270 158 LKIGDFGWSVQSRS 171 (284)
Q Consensus 158 ~~l~d~~~~~~~~~ 171 (284)
+.++|.+.+.....
T Consensus 303 lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 303 LYIIDVSQSVEHDH 316 (520)
T ss_pred EEEEEccccccCCC
Confidence 99999988754433
No 468
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.10 E-value=2.7e-05 Score=63.30 Aligned_cols=29 Identities=31% Similarity=0.422 Sum_probs=24.8
Q ss_pred CCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+++|||+++.||+++.++..-++||+.+
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a 192 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCL 192 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence 35899999999999987666679999975
No 469
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.08 E-value=6.8e-07 Score=79.78 Aligned_cols=241 Identities=17% Similarity=0.133 Sum_probs=157.7
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc-ccceeeEEecCCeEEEEE
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN-ILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~-i~~~~~~~~~~~~~~~v~ 98 (284)
-|...+.++.++.+.+++.+...+.... .+.+... ...+-+++++.+++||| .+..++-+..+....+++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~ 313 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM 313 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence 3555666788888999888765554333 4444222 24456788999999999 455555555667889999
Q ss_pred eecCCC-chH-HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCCCEEEeecccccccCCC--Cc
Q 023270 99 EYAHRG-ELY-RELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSK--RH 174 (284)
Q Consensus 99 e~~~~~-~L~-~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~~~~--~~ 174 (284)
++++++ +.. ..-...-.+..-+...+.+.-+.+++++|+.--+|+| ||+. .++..+..+++........ ..
T Consensus 314 ~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~-s~~~~~~~~~~v~~~L~~~~~~~ 388 (829)
T KOG0576|consen 314 RICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG-SEEEVKLLDFAVPPQLTRTMKPR 388 (829)
T ss_pred hhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc-cccccccccccCCcccCcccccc
Confidence 999877 222 1111112344455556667777889999988656776 6665 4478889999876443333 45
Q ss_pred cccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCC-----H-HHHHH
Q 023270 175 TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSFPSAPSIS-----A-EAKHL 248 (284)
Q Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~l~~l 248 (284)
...+++.++|||+.....++.+.|.|+++.-..++.-|.+|-..+... .......+..+.-.+ + .-+++
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~-----~~~~g~~p~s~~L~~~~aw~~~~~~~~ 463 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAV-----LPMIGNGPNSPMLTDKSAWSPVFHRDF 463 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCccc-----cCCCCCCCCccccchhhhcCcccccCC
Confidence 566889999999999999999999999998666666666554331000 000000000000000 1 11246
Q ss_pred HHHhcccCCCCCCCHHhhhcCccccccCCCC
Q 023270 249 ISRLLVKDSSKRLSLQKIMEHPWIIKNANPR 279 (284)
Q Consensus 249 i~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (284)
...|+...|..|+....++-|.+|-.|+...
T Consensus 464 ~~~~~~g~P~~pkv~mgacfsKvfngCpl~i 494 (829)
T KOG0576|consen 464 PAPCLNGLPPTPKVHMGACFSKVFNGCPLRI 494 (829)
T ss_pred cccccCCCCCCCcchhhHHHHHHhccCcccc
Confidence 7789999999999999999999999997754
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.06 E-value=6.4e-05 Score=61.00 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=45.5
Q ss_pred eeeeccCCCeEEEEEEEec-CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc-cceeeEEecCCeEEEEEeec
Q 023270 24 GRPLGKGKFGRVYLVREVE-SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI-LRLYGWFHDDERIFLILEYA 101 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~-~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i-~~~~~~~~~~~~~~~v~e~~ 101 (284)
++.|..|-...+|++.... .++.|++|+....... .-...+|+.+++.+...++ .+++.... + .+++||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~----~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL----IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc----eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEee
Confidence 4677888888999887543 3568999987432111 1122356777777654444 33433322 2 4799999
Q ss_pred CCCch
Q 023270 102 HRGEL 106 (284)
Q Consensus 102 ~~~~L 106 (284)
+|.++
T Consensus 75 ~G~~l 79 (235)
T cd05157 75 PGRTL 79 (235)
T ss_pred CCCcC
Confidence 87665
No 471
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.91 E-value=0.00028 Score=59.38 Aligned_cols=136 Identities=19% Similarity=0.174 Sum_probs=78.6
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc--ccceee------EEecCCeE
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN--ILRLYG------WFHDDERI 94 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~--i~~~~~------~~~~~~~~ 94 (284)
-.+.+..|....+|++.. ++..+++|++.... ...+..|++++..+.+.+ +.+++. +...++..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEKVS------AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCCCC------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 356777888889998864 34578999875411 123445666666554322 333333 12334567
Q ss_pred EEEEeecCCCchHH----HH----------Hhc-CCC----------CHHHH----------HHHHHHHHHHHHHHHh--
Q 023270 95 FLILEYAHRGELYR----EL----------RKH-RRF----------TEQQA----------ATYIASLTNALAYCHE-- 137 (284)
Q Consensus 95 ~~v~e~~~~~~L~~----~l----------~~~-~~l----------~~~~~----------~~i~~~i~~~l~~lh~-- 137 (284)
++|+++.+|.++.. .. ... ..+ .+... ......+..++.++..
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999998765421 11 000 000 00000 0011112333444443
Q ss_pred -----CCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 138 -----NHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 138 -----~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+++|||++|.||+++.++.+.|+||+.+
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a 203 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFA 203 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhh
Confidence 47999999999999998887899999875
No 472
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.90 E-value=0.00024 Score=55.56 Aligned_cols=128 Identities=20% Similarity=0.262 Sum_probs=85.6
Q ss_pred cCcEeeeeeccCCC-eEEEEEEEecCCceEEEEehhh---hhH-------H-H-------HHHHHHHHHHHHHHHhC---
Q 023270 19 QDFEIGRPLGKGKF-GRVYLVREVESKHPVALKIIFK---EQI-------E-K-------YKIQHQLRREMEIQSSL--- 76 (284)
Q Consensus 19 ~~y~~~~~lg~g~~-~~v~~~~~~~~~~~v~iK~~~~---~~~-------~-~-------~~~~~~~~~~~~~~~~l--- 76 (284)
.+++.++.||+|.- |.||++.. +|..||+|.+.. ... . . .....-+..|.+...++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78999999999999 99999985 677999999321 000 0 0 01123445555555544
Q ss_pred CCCcc--cceeeEEecC------------------CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 023270 77 RHPNI--LRLYGWFHDD------------------ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCH 136 (284)
Q Consensus 77 ~h~~i--~~~~~~~~~~------------------~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh 136 (284)
.+.++ ++.+++..-. -...||.||.+... .++... +.+|++-+..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~----~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRD----IPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhH----HHHHHHHHHHHH
Confidence 45566 8888886211 13577888776543 223333 456666688899
Q ss_pred hCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 137 ENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 137 ~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
+.||+-+|+++.|.. + -+|+||+.+
T Consensus 182 k~gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc---C--CEEEecccC
Confidence 999999999999986 3 378888753
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.90 E-value=0.00045 Score=54.31 Aligned_cols=131 Identities=21% Similarity=0.333 Sum_probs=87.1
Q ss_pred eeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-------------HHHHHHHHHHHHHHHHHhCC------CCcccce
Q 023270 24 GRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-------------EKYKIQHQLRREMEIQSSLR------HPNILRL 84 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~------h~~i~~~ 84 (284)
...||+|+.=.+|.-- .....+||+...... ......+..++|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 4568899988888332 334567888866550 00011234445555444444 7899999
Q ss_pred eeEEecCCeEEEEEeecC------CCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeEecCCC--
Q 023270 85 YGWFHDDERIFLILEYAH------RGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG-- 156 (284)
Q Consensus 85 ~~~~~~~~~~~~v~e~~~------~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~dl~p~nil~~~~~-- 156 (284)
+|+.+.+.-..+|+|... ..+|.++++.. .++. .....+. +-..+|-+++|+..|++|.||++..++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~ 157 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRRDSG 157 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEecCCC
Confidence 999999988899998642 23678877553 4555 4444443 445577889999999999999996543
Q ss_pred --CEEEee
Q 023270 157 --RLKIGD 162 (284)
Q Consensus 157 --~~~l~d 162 (284)
.+.|+|
T Consensus 158 ~~~lvlID 165 (199)
T PF10707_consen 158 EFRLVLID 165 (199)
T ss_pred ceEEEEEe
Confidence 466666
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.89 E-value=6e-05 Score=62.09 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=73.6
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc-cceeeEEecCCeEEEEEeecCCC
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI-LRLYGWFHDDERIFLILEYAHRG 104 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i-~~~~~~~~~~~~~~~v~e~~~~~ 104 (284)
.+..|-.+.+|++. .++..+++|........- .-...+|.++++.+...++ .+++... + -++|+||++|.
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~---~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~ 73 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL---GVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGE 73 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccc---cCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCc
Confidence 46678888999886 456788899864321110 0123467777777754433 3344332 2 36899999876
Q ss_pred chHH--------------HHH---hcC----CCCHHH-HHHHHHHH---------HHHHHHHHh--------CCccccCC
Q 023270 105 ELYR--------------ELR---KHR----RFTEQQ-AATYIASL---------TNALAYCHE--------NHVIHRDI 145 (284)
Q Consensus 105 ~L~~--------------~l~---~~~----~l~~~~-~~~i~~~i---------~~~l~~lh~--------~gi~H~dl 145 (284)
++.. .+. +.. +++... +..+..++ ...+..+.. ..++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 5431 111 111 112111 11111111 111222221 24899999
Q ss_pred CCCCeEecCCCCEEEeeccccc
Q 023270 146 KPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 146 ~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.|.||+++.++ +.++||+.+.
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccC
Confidence 99999998877 7899999863
No 475
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.78 E-value=0.0011 Score=57.93 Aligned_cols=82 Identities=18% Similarity=0.219 Sum_probs=50.9
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH--HH--HHHHHHHHHHHHHHHhCC---CCcccceeeEEecCCeE
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI--EK--YKIQHQLRREMEIQSSLR---HPNILRLYGWFHDDERI 94 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~--~~--~~~~~~~~~~~~~~~~l~---h~~i~~~~~~~~~~~~~ 94 (284)
.-.+.||.|..+.||++.+..+++.++||.-..... .. ....+....|.+.+..+. ..++++++.+ +.+..
T Consensus 29 ~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~ 106 (401)
T PRK09550 29 LTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELA 106 (401)
T ss_pred ceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCC
Confidence 345789999999999999854445899998532100 00 011234445556565542 2455666665 44667
Q ss_pred EEEEeecCCCc
Q 023270 95 FLILEYAHRGE 105 (284)
Q Consensus 95 ~~v~e~~~~~~ 105 (284)
++|||++++..
T Consensus 107 ~lVME~L~~~~ 117 (401)
T PRK09550 107 VTVMEDLSDHK 117 (401)
T ss_pred EEEEecCCCcc
Confidence 89999987643
No 476
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.77 E-value=0.00011 Score=64.74 Aligned_cols=162 Identities=15% Similarity=0.180 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhCCCCcccceeeEEecC-CeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 023270 65 QLRREMEIQSSLRHPNILRLYGWFHDD-ERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHR 143 (284)
Q Consensus 65 ~~~~~~~~~~~l~h~~i~~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~gi~H~ 143 (284)
.+.-..++++.+.|++....+++-... ....+|+|+++ .||.+.+..+. +-..... +|+
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~-l~~~s~~------------------~~~ 87 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN-LKDESLL------------------AHG 87 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc-cchhhhc------------------ccc
Confidence 455677889999999999988876533 35788999996 59999887654 2211111 232
Q ss_pred CCCCCCeEecCCCCEEEeecccccccCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHH
Q 023270 144 DIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKD 223 (284)
Q Consensus 144 dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~ 223 (284)
-+ +-|++ +.+| .+.... .....+++|||++|.++.++.-|...+......+
T Consensus 88 ~~-~~~~~-------~~td-~~~t~~--------------------~~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~ 138 (725)
T KOG1093|consen 88 VL-HLNII-------YITD-HFLTKY--------------------PSPIGPKSDVWSLGFIILELYLGISLEAELTESE 138 (725)
T ss_pred cc-eehhh-------hccc-cccccC--------------------CCCCCcchhhhhHHHHHHHHHHhhHHHHHHHHHH
Confidence 11 11222 2222 111111 0111259999999999999999987777666666
Q ss_pred HHHHHHhcCCCCCCCC----------CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccc
Q 023270 224 TFRRIMKVDLSFPSAP----------SISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKN 275 (284)
Q Consensus 224 ~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (284)
....+.+-........ ..+.-+.++...|+...|..||...++.+++-|.+.
T Consensus 139 ~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 139 YLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred HHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 6655554321111110 235567788999999999999999999999888764
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.75 E-value=0.00022 Score=60.18 Aligned_cols=76 Identities=22% Similarity=0.235 Sum_probs=45.2
Q ss_pred eeeeccCCCeEEEEEEEec------CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc-cceeeEEecCCeEEE
Q 023270 24 GRPLGKGKFGRVYLVREVE------SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI-LRLYGWFHDDERIFL 96 (284)
Q Consensus 24 ~~~lg~g~~~~v~~~~~~~------~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i-~~~~~~~~~~~~~~~ 96 (284)
++.+..|-...+|++.... .++.|++|+....... .....+|.++++.+...++ .+++.++. + ..
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL----LIDRERELVVFARLSERNLGPKLYGIFP-N---GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc----eechHHHHHHHHHHHhCCCCCceEEEeC-C---Cc
Confidence 4567778888899887543 2578999997543211 1234466666666654333 34455443 2 35
Q ss_pred EEeecCCCchH
Q 023270 97 ILEYAHRGELY 107 (284)
Q Consensus 97 v~e~~~~~~L~ 107 (284)
|+||++|.++.
T Consensus 75 v~e~i~G~~l~ 85 (302)
T cd05156 75 IEEFIPSRTLT 85 (302)
T ss_pred hhheeCCCcCC
Confidence 78888776553
No 478
>PRK05231 homoserine kinase; Provisional
Probab=97.66 E-value=0.0017 Score=55.27 Aligned_cols=29 Identities=28% Similarity=0.413 Sum_probs=25.4
Q ss_pred CCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.|++|||++|.||+++.+...-++||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~ 215 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFA 215 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccc
Confidence 48999999999999986666689999976
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.56 E-value=0.0021 Score=54.49 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=78.9
Q ss_pred cccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCc--ccceeeE------E
Q 023270 17 SLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPN--ILRLYGW------F 88 (284)
Q Consensus 17 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~--i~~~~~~------~ 88 (284)
.+....-.+.++.|....+|++.. ++..+++|.+..... . ..+..+++++..+...+ +.+++.. .
T Consensus 20 ~~~~~~~i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~~~-~----~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~ 92 (307)
T TIGR00938 20 DLGELLSLKGIAEGVENSNYLLTT--DVGRYILTLYEKRVK-A----EELPFFLALTTHLAARGLPVPKPVKSRDGRQLS 92 (307)
T ss_pred CCCCceeccccCCccccceEEEEe--CCCcEEEEEecCCCC-H----HHHHHHHHHHHHHHHCCCCCCccccCCCCCeeh
Confidence 334455567788888889998864 344688898744211 1 12334445555543222 3333331 1
Q ss_pred ecCCeEEEEEeecCCCchH----H-------HH---Hh-cCCC--------CHHH-----HH----------HHHHHHHH
Q 023270 89 HDDERIFLILEYAHRGELY----R-------EL---RK-HRRF--------TEQQ-----AA----------TYIASLTN 130 (284)
Q Consensus 89 ~~~~~~~~v~e~~~~~~L~----~-------~l---~~-~~~l--------~~~~-----~~----------~i~~~i~~ 130 (284)
..++..+++++|++|.++. . .+ .. ...+ .... .. .....+..
T Consensus 93 ~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~ 172 (307)
T TIGR00938 93 TLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDK 172 (307)
T ss_pred hcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHH
Confidence 2345678999998874421 1 11 10 0000 0000 00 00111223
Q ss_pred HHHHHH-------hCCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 131 ALAYCH-------ENHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 131 ~l~~lh-------~~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+.++. ..+++|||+++.||+++.++...++||+.+
T Consensus 173 ~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~ 215 (307)
T TIGR00938 173 ELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFA 215 (307)
T ss_pred HHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccc
Confidence 444443 258999999999999998887789999975
No 480
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.33 E-value=0.0028 Score=54.30 Aligned_cols=76 Identities=17% Similarity=0.193 Sum_probs=44.1
Q ss_pred eeccCCCeEEEEEEEecCCceEEEEehhhhhH--HH--HHHHHHHHHHHHHHHhCC--CC-cccceeeEEecCCeEEEEE
Q 023270 26 PLGKGKFGRVYLVREVESKHPVALKIIFKEQI--EK--YKIQHQLRREMEIQSSLR--HP-NILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 26 ~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~--~~--~~~~~~~~~~~~~~~~l~--h~-~i~~~~~~~~~~~~~~~v~ 98 (284)
.||.|....||++.+..+++.++||.-..... +. +-......-|...|+... .| .+++++. .+++...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 57999999999999754446799997532111 00 111233334555555443 23 3333333 3556667899
Q ss_pred eecCC
Q 023270 99 EYAHR 103 (284)
Q Consensus 99 e~~~~ 103 (284)
|+.+.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 98854
No 481
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.30 E-value=0.0029 Score=53.37 Aligned_cols=147 Identities=15% Similarity=0.259 Sum_probs=83.8
Q ss_pred cCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcc--cceeeEEecCC--eE
Q 023270 19 QDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNI--LRLYGWFHDDE--RI 94 (284)
Q Consensus 19 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i--~~~~~~~~~~~--~~ 94 (284)
....++..+..|....+|...+. ++.++++ ... ............+|+..++.+..-.+ ...++++.++. ..
T Consensus 25 ~~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~p 100 (321)
T COG3173 25 AGLLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTP 100 (321)
T ss_pred CCCceeeeccCCcccceEEEecC--CceEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCc
Confidence 44556666667777777776654 7889999 321 11122234566678888887754333 33344444443 56
Q ss_pred EEEEeecCCCchH------------------HHHHh---cC-----C------CCHHHHHHHHHHH--------------
Q 023270 95 FLILEYAHRGELY------------------RELRK---HR-----R------FTEQQAATYIASL-------------- 128 (284)
Q Consensus 95 ~~v~e~~~~~~L~------------------~~l~~---~~-----~------l~~~~~~~i~~~i-------------- 128 (284)
|.||+|.+|..+. +.|.. -+ . ....++..+..+.
T Consensus 101 f~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~ 180 (321)
T COG3173 101 FYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLA 180 (321)
T ss_pred eEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchH
Confidence 9999999873221 11110 00 0 0111111111111
Q ss_pred HHHHHHHHhC--------CccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 129 TNALAYCHEN--------HVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 129 ~~~l~~lh~~--------gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
.....+++.+ .++|||+++.|+++++++-+=++||+.+...
T Consensus 181 ~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 181 DRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 1223344432 4799999999999999998999999987443
No 482
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.16 E-value=0.0064 Score=53.09 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=47.1
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhH-----HHHHHHHHHHHHHHHHHhCC---CCcccceeeEEecCCeE
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQI-----EKYKIQHQLRREMEIQSSLR---HPNILRLYGWFHDDERI 94 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~~~~~~~~~~~l~---h~~i~~~~~~~~~~~~~ 94 (284)
..+.||.|....||++.+ .+..++||.-..... +.- .......|++.|+.+. ..++.+++.++. +..
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl-~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~ 110 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPM-TKERAYFEATALREHGRLCPDHVPEVYHFDR--TMA 110 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccC-CccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCC
Confidence 577889999999999886 345699998651111 000 1122223445554443 346677777665 446
Q ss_pred EEEEeecCC
Q 023270 95 FLILEYAHR 103 (284)
Q Consensus 95 ~~v~e~~~~ 103 (284)
+++||++++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 788999976
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.06 E-value=0.0068 Score=50.49 Aligned_cols=29 Identities=24% Similarity=0.516 Sum_probs=24.0
Q ss_pred CccccCCCCCCeEecCCCC-EEEeeccccc
Q 023270 139 HVIHRDIKPENLLLDHEGR-LKIGDFGWSV 167 (284)
Q Consensus 139 gi~H~dl~p~nil~~~~~~-~~l~d~~~~~ 167 (284)
.++|||++|.||+++.++. .-|+||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcc
Confidence 4799999999999987554 5699999763
No 484
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=97.05 E-value=0.0062 Score=51.90 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=71.3
Q ss_pred cCCeEEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeEecCCCCEEEeecccccc
Q 023270 90 DDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHEN-HVIHRDIKPENLLLDHEGRLKIGDFGWSVQ 168 (284)
Q Consensus 90 ~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~~-gi~H~dl~p~nil~~~~~~~~l~d~~~~~~ 168 (284)
+..+.|++|++.. +++.. ++ .-..+++..++.+.+..+.-+... ..-|+|++..||+++ .|+|.|+||.+++-
T Consensus 297 e~~y~yl~~kdhg-t~is~-ik---~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 297 ETLYLYLHFKDHG-TPISI-IK---ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred CceEEEEEEecCC-ceeee-ee---cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 4457788999874 45442 22 235788889999988888777755 578999999999998 99999999998853
Q ss_pred cCCCCccccCCCcccCccccCCCCCCchhhHhhHHHHH
Q 023270 169 SRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILC 206 (284)
Q Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 206 (284)
..+... .--...-.|-.+. +.-+..-+||-+.-.+
T Consensus 371 ~~~q~~--isy~rldhp~lF~-G~dd~QFeIYrlMr~l 405 (488)
T COG5072 371 SYSQGI--ISYNRLDHPDLFN-GVDDYQFEIYRLMRRL 405 (488)
T ss_pred ccCCce--eeccccCchhhhc-CccceeeeHHHHHHHH
Confidence 222110 1111123444444 3446677777754443
No 485
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=97.03 E-value=0.023 Score=48.17 Aligned_cols=29 Identities=14% Similarity=0.168 Sum_probs=26.7
Q ss_pred CccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 139 HVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 139 gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
+++|||+.++||+++.++.+.++||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 79999999999999999999999998763
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.97 E-value=0.0059 Score=52.27 Aligned_cols=28 Identities=36% Similarity=0.637 Sum_probs=24.8
Q ss_pred ccccCCCCCCeEecC-CCCEEEeeccccc
Q 023270 140 VIHRDIKPENLLLDH-EGRLKIGDFGWSV 167 (284)
Q Consensus 140 i~H~dl~p~nil~~~-~~~~~l~d~~~~~ 167 (284)
.+|+|+.+.||++++ ++.++++||+++.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 699999999999975 4789999999873
No 487
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.96 E-value=0.0074 Score=48.14 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=52.7
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC---CCCcccceeeEEecCCeEEEEE
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL---RHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l---~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+..+.+..|.--.-|.+.+ ...++.+|+-..+. ...+..|+.-++.+ +.-.+.+++....+.++.|+|+
T Consensus 19 ~er~~v~gG~inea~~v~d--g~~~~FvK~n~~~~------~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVl 90 (286)
T COG3001 19 KEREEVSGGDINEAWRLRD--GTDPFFVKCNQREQ------LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVL 90 (286)
T ss_pred hcccccCCccccceeEeec--CCcceEEEecchhh------HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEE
Confidence 3445566777777776654 55678899853332 23444555544444 4456778888888899999999
Q ss_pred eecCCCchH
Q 023270 99 EYAHRGELY 107 (284)
Q Consensus 99 e~~~~~~L~ 107 (284)
||.+.+++.
T Consensus 91 e~L~~~~~d 99 (286)
T COG3001 91 EYLPTGPLD 99 (286)
T ss_pred eeccCCCCC
Confidence 999876654
No 488
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.95 E-value=0.00016 Score=71.24 Aligned_cols=262 Identities=11% Similarity=-0.013 Sum_probs=155.4
Q ss_pred hcccccccCcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHH--HHHHHHHHHHHHHHhCCCCcccceeeEEe
Q 023270 12 RKREWSLQDFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKY--KIQHQLRREMEIQSSLRHPNILRLYGWFH 89 (284)
Q Consensus 12 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~--~~~~~~~~~~~~~~~l~h~~i~~~~~~~~ 89 (284)
....|.+..+++.=-++-+..+.--..+.+.++ +.+++...-.++.- ...+-...+..-.+...|+++.....=..
T Consensus 1222 skM~s~~e~~EV~l~i~~~~~~R~k~Lr~kid~--Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ 1299 (2724)
T KOG1826|consen 1222 SKMFSAMEHSEVNLGISNHFHFRNKWLRSKIDW--FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIP 1299 (2724)
T ss_pred HHHHHHhhhhheeeecccceeeccchHhhhhce--eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCC
Confidence 345667777777777766665543222222222 33444322222211 11122222223344456766655443222
Q ss_pred --cCCeEEEEEeecCCCchHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-C----ccccCCCCCCeEecCCCCE
Q 023270 90 --DDERIFLILEYAHRGELYRELRKH----RRFTEQQAATYIASLTNALAYCHEN-H----VIHRDIKPENLLLDHEGRL 158 (284)
Q Consensus 90 --~~~~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~~i~~~l~~lh~~-g----i~H~dl~p~nil~~~~~~~ 158 (284)
+....+.+++++.+|.+.+.|-++ +.++...+.....+.+....-+|.. + .+|.++++-|.++..+-++
T Consensus 1300 ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v 1379 (2724)
T KOG1826|consen 1300 PSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNV 1379 (2724)
T ss_pred CCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcc
Confidence 223568899999999999988554 3444444444444434444444432 2 5789999999999999999
Q ss_pred EEeecccccccCCCC---ccccCCCcccCccccCCCCCCchhhHhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC
Q 023270 159 KIGDFGWSVQSRSKR---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKDTFRRIMKVDLSF 235 (284)
Q Consensus 159 ~l~d~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~ 235 (284)
+++++|+.+...+.. ....+++.|+.|++...-.++.++|+|..|+-++.+.-|..+|-.-... .+..+......+
T Consensus 1380 ~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi~flq~-~Lkgiidn~tf~ 1458 (2724)
T KOG1826|consen 1380 KLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFIFFLQP-ALKGIIDNHTFF 1458 (2724)
T ss_pred cccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHHHHH-HHcCcccccccc
Confidence 999999986332221 3345677889999988888888899999999999888776555322221 112222222222
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccccC
Q 023270 236 PSAPSISAEAKHLISRLLVKDSSKRLSLQKIMEHPWIIKNA 276 (284)
Q Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (284)
..+...|.+.....-.+|...-..||.-...+.-+.|.-..
T Consensus 1459 sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~~~ 1499 (2724)
T KOG1826|consen 1459 SIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFAVGL 1499 (2724)
T ss_pred cccccCCCcccHHHHHHHHHHhhhcchhhhhcccccccccc
Confidence 22223355555555666666777889888888888876553
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.92 E-value=0.0058 Score=51.09 Aligned_cols=75 Identities=19% Similarity=0.295 Sum_probs=44.7
Q ss_pred EeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhC---CCCcccceeeEEecCCeEEEEE
Q 023270 22 EIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSL---RHPNILRLYGWFHDDERIFLIL 98 (284)
Q Consensus 22 ~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l---~h~~i~~~~~~~~~~~~~~~v~ 98 (284)
+-.+.++.|..+.+|++. .+++.+.+|+-..... ..+..|..-++.+ ..-.+.+++.+....+..++|+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~------~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll 91 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGR------DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL 91 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGC------CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhhH------HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence 345668899999999877 6788899999753221 2344555555555 4556788888887777779999
Q ss_pred eecCCC
Q 023270 99 EYAHRG 104 (284)
Q Consensus 99 e~~~~~ 104 (284)
||.+.+
T Consensus 92 e~l~~~ 97 (288)
T PF03881_consen 92 EFLEMG 97 (288)
T ss_dssp E-----
T ss_pred EeecCC
Confidence 998765
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.85 E-value=0.01 Score=51.58 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=46.6
Q ss_pred eeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHH--H-HHHHHHHHHHHHHHHhCC--CC-cccceeeEEecCCeEEE
Q 023270 23 IGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIE--K-YKIQHQLRREMEIQSSLR--HP-NILRLYGWFHDDERIFL 96 (284)
Q Consensus 23 ~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~--~-~~~~~~~~~~~~~~~~l~--h~-~i~~~~~~~~~~~~~~~ 96 (284)
..+.||.|.-.-||++.+..+++.++||--..-... + +-..+...-|...|+... .| ++++++. .+++...+
T Consensus 33 ~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~ 110 (409)
T PRK12396 33 QCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCC 110 (409)
T ss_pred eeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhH
Confidence 477899999999999997444567999864321110 0 111233444555555442 23 3444444 34556678
Q ss_pred EEeecCC
Q 023270 97 ILEYAHR 103 (284)
Q Consensus 97 v~e~~~~ 103 (284)
|||+++.
T Consensus 111 vMEdL~~ 117 (409)
T PRK12396 111 VMEDLSD 117 (409)
T ss_pred HHHhCcc
Confidence 8888753
No 491
>PLN02236 choline kinase
Probab=96.79 E-value=0.0074 Score=51.98 Aligned_cols=139 Identities=16% Similarity=0.196 Sum_probs=76.5
Q ss_pred cEeeeeeccCCCeEEEEEEEec----CCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCccc-ceeeEEecCCeEE
Q 023270 21 FEIGRPLGKGKFGRVYLVREVE----SKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNIL-RLYGWFHDDERIF 95 (284)
Q Consensus 21 y~~~~~lg~g~~~~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~-~~~~~~~~~~~~~ 95 (284)
..-++.+..|-...+|++.... .++.|++|+...... ...+ -.+|..+++.+...++- ++++.+..+
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~---~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g---- 109 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE---LFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG---- 109 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC---eeec-hHHHHHHHHHHHHcCCCCceEEEECCc----
Confidence 4445566678888999987432 246799998754321 1111 14566666666544443 455555332
Q ss_pred EEEeecCCCchHHH----------H----H---hcC-C----C-CHHHHHHHHHH-----------------HHHHHHHH
Q 023270 96 LILEYAHRGELYRE----------L----R---KHR-R----F-TEQQAATYIAS-----------------LTNALAYC 135 (284)
Q Consensus 96 ~v~e~~~~~~L~~~----------l----~---~~~-~----l-~~~~~~~i~~~-----------------i~~~l~~l 135 (284)
.|.+|+++.++... + + +.. + . ..+.+..++.+ +...+..|
T Consensus 110 ~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L 189 (344)
T PLN02236 110 RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLL 189 (344)
T ss_pred eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHH
Confidence 47888776554311 1 0 000 0 0 11222222211 11111111
Q ss_pred ----H----hCCccccCCCCCCeEecC-CCCEEEeeccccc
Q 023270 136 ----H----ENHVIHRDIKPENLLLDH-EGRLKIGDFGWSV 167 (284)
Q Consensus 136 ----h----~~gi~H~dl~p~nil~~~-~~~~~l~d~~~~~ 167 (284)
. ...++|+|+++.||+++. ++.+.++||.++.
T Consensus 190 ~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 190 EKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred HHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 1 225899999999999976 4789999999863
No 492
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.48 E-value=0.066 Score=45.76 Aligned_cols=27 Identities=22% Similarity=0.272 Sum_probs=22.9
Q ss_pred CCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+++|||+.+.||+++ + .+.++||+-+
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~ 222 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDA 222 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCC
Confidence 4689999999999995 4 5789999965
No 493
>PRK10593 hypothetical protein; Provisional
Probab=96.40 E-value=0.026 Score=47.56 Aligned_cols=106 Identities=10% Similarity=0.045 Sum_probs=67.4
Q ss_pred CcEeeeeeccCCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCC---CcccceeeEEec---CCe
Q 023270 20 DFEIGRPLGKGKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRH---PNILRLYGWFHD---DER 93 (284)
Q Consensus 20 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h---~~i~~~~~~~~~---~~~ 93 (284)
.-.-.+.||.|..+.||..... +..+++|...... . ...+..|...++.+.. -.+.++++++.. .+.
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~--~~~~~~k~~~~~~-~----~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~ 87 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS--QGNPMPLMARSFS-T----PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGP 87 (297)
T ss_pred hhheeeecCCccceeEEEEEcC--CCCEEEEEecccc-c----chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCC
Confidence 3445667999999999988642 2357777753210 1 1356677777777753 356777776643 367
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHE 137 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~lh~ 137 (284)
.++|||+.++.++.+. ..+......+..++++++..||+
T Consensus 88 ~~LVmE~i~G~~~~~~-----~~~~~~~~~l~~~l~~~La~LH~ 126 (297)
T PRK10593 88 DVLLLERLRGVSVEAP-----ARTPERWEQLKDQIVEGLLAWHR 126 (297)
T ss_pred eEEEEeccCCEecCCC-----CCCHHHHHHHHHHHHHHHHHHhC
Confidence 8999999998776541 12233344555566666666665
No 494
>PTZ00384 choline kinase; Provisional
Probab=95.95 E-value=0.029 Score=49.02 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=24.1
Q ss_pred CCccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
...+|.|+.+.||+.+ ++.+.++||.++.
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEecccc
Confidence 4579999999999875 4569999999873
No 495
>PTZ00296 choline kinase; Provisional
Probab=95.76 E-value=0.096 Score=46.69 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=23.6
Q ss_pred CccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 139 HVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 139 gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.++|+|+.+.||+.+.+ .++|+||.++.
T Consensus 285 VfCHNDl~~~NiL~~~~-~l~LIDfEYAg 312 (442)
T PTZ00296 285 VFCHNDLQENNIINTNK-CLRLIDFEYSG 312 (442)
T ss_pred eEEeCCCCccceeecCC-CEEEEeecccc
Confidence 47999999999987644 49999999873
No 496
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.75 E-value=0.05 Score=43.35 Aligned_cols=115 Identities=21% Similarity=0.236 Sum_probs=66.5
Q ss_pred CCCeEEEEEEEecCCceEEEEehhhhhHHHHHHHHHHHHHHHHHHhCCCCcccceeeEEecCCeEEEEEeecCCCchHHH
Q 023270 30 GKFGRVYLVREVESKHPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRE 109 (284)
Q Consensus 30 g~~~~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~~~~~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 109 (284)
++-++.-.++... .+.++|++..-...- ....++.+.+++.+++ +|+++.. ...-.+.++.|+|-.....
T Consensus 73 ~gNsTl~~~kt~i--G~L~lKKi~slp~~~--~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i~-- 142 (308)
T PF07387_consen 73 NGNSTLLIGKTKI--GPLFLKKIRSLPCCI--NDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKIN-- 142 (308)
T ss_pred CCceEEEEecccc--chhhhhhccCCCccc--chhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCcccc--
Confidence 3444444443322 345566654332221 1234566677776554 3555542 1333678899998542111
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCCCCCeEecCCCCEEEeeccc
Q 023270 110 LRKHRRFTEQQAATYIASLTNALAYCHEN--HVIHRDIKPENLLLDHEGRLKIGDFGW 165 (284)
Q Consensus 110 l~~~~~l~~~~~~~i~~~i~~~l~~lh~~--gi~H~dl~p~nil~~~~~~~~l~d~~~ 165 (284)
. ..++..=+.+|.-.|+. +..|||..|+|||-+..|.+||.|=+.
T Consensus 143 -------~----~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 143 -------F----SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred -------h----hHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 1 11112224556677843 689999999999999999999999664
No 497
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.62 E-value=0.0083 Score=50.39 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=54.1
Q ss_pred EEEEEeecCCCchHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCCeEecCCCCEEEeeccccccc
Q 023270 94 IFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYC-HENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQS 169 (284)
Q Consensus 94 ~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~~i~~~l~~l-h~~gi~H~dl~p~nil~~~~~~~~l~d~~~~~~~ 169 (284)
-.+||-|....-+..--..+-.|+.++......|+..++..| |+.-++|-|++--|+|+..+ .+.++|...+...
T Consensus 358 hvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~g-Kvw~IDVsQsvep 433 (531)
T KOG2269|consen 358 HVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMCRLYKECLLVHADLSEYNLLWTPG-KVWVIDVSQSVEP 433 (531)
T ss_pred ceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHHHHHHhhheeecchhhhhheecCC-ceEEEechhccCC
Confidence 467888875332222111223478888888889999888776 46689999999999999776 8889998766433
No 498
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=95.55 E-value=0.024 Score=46.95 Aligned_cols=44 Identities=30% Similarity=0.444 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhC--CccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 124 YIASLTNALAYCHEN--HVIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 124 i~~~i~~~l~~lh~~--gi~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.+..+-.++.-++.. -++|+|+.|+|++.++.+.++|+||.++.
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg 182 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAG 182 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCC
Confidence 344444444444444 48999999999999999999999999874
No 499
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.17 E-value=0.05 Score=46.05 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=24.6
Q ss_pred CCccccCCCCCCeEecCCCCEEEeecccc
Q 023270 138 NHVIHRDIKPENLLLDHEGRLKIGDFGWS 166 (284)
Q Consensus 138 ~gi~H~dl~p~nil~~~~~~~~l~d~~~~ 166 (284)
.+++|||+++.||+++. +.+.++||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 47899999999999987 67899999864
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.06 E-value=0.019 Score=44.61 Aligned_cols=27 Identities=26% Similarity=0.517 Sum_probs=24.2
Q ss_pred ccccCCCCCCeEecCCCCEEEeeccccc
Q 023270 140 VIHRDIKPENLLLDHEGRLKIGDFGWSV 167 (284)
Q Consensus 140 i~H~dl~p~nil~~~~~~~~l~d~~~~~ 167 (284)
.+|+|+.|.|++++.++ ++++||+++.
T Consensus 79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~ 105 (188)
T PRK10271 79 PLHMDVHAGNLVHSASG-LRLIDWEYAG 105 (188)
T ss_pred eecCCCCCccEEEECCC-EEEEeCCccc
Confidence 68999999999998777 8899999874
Done!