Query 023273
Match_columns 284
No_of_seqs 131 out of 1210
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:47:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023273.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023273hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 6.3E-51 1.4E-55 349.9 25.6 275 1-283 4-314 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 7.6E-46 1.7E-50 324.8 28.8 273 1-283 1-302 (326)
3 KOG0024 Sorbitol dehydrogenase 100.0 1.9E-44 4E-49 301.6 22.7 276 1-283 5-328 (354)
4 COG1062 AdhC Zn-dependent alco 100.0 1.1E-42 2.3E-47 293.4 21.0 275 1-283 3-344 (366)
5 KOG0023 Alcohol dehydrogenase, 100.0 5.9E-42 1.3E-46 285.9 23.6 270 2-277 11-326 (360)
6 KOG1197 Predicted quinone oxid 100.0 8.1E-42 1.7E-46 276.0 22.9 268 2-283 10-307 (336)
7 cd08239 THR_DH_like L-threonin 100.0 1.3E-39 2.8E-44 288.8 29.7 275 1-283 1-317 (339)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 1.1E-39 2.3E-44 292.7 28.6 277 1-283 1-350 (371)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.7E-39 5.9E-44 288.8 28.4 274 1-283 2-336 (358)
10 KOG0022 Alcohol dehydrogenase, 100.0 3.2E-40 7E-45 274.3 20.6 276 1-283 8-353 (375)
11 PRK09880 L-idonate 5-dehydroge 100.0 2.5E-39 5.3E-44 287.5 27.7 272 1-283 5-320 (343)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.2E-38 2.6E-43 285.6 28.0 275 1-283 2-346 (368)
13 PLN02740 Alcohol dehydrogenase 100.0 1.5E-38 3.2E-43 286.3 28.7 276 1-283 11-359 (381)
14 TIGR02822 adh_fam_2 zinc-bindi 100.0 5.4E-38 1.2E-42 277.2 30.3 271 3-283 1-307 (329)
15 PLN02586 probable cinnamyl alc 100.0 5.4E-38 1.2E-42 280.4 27.8 276 1-283 11-330 (360)
16 TIGR01202 bchC 2-desacetyl-2-h 100.0 3.9E-38 8.4E-43 275.7 25.9 265 1-283 2-286 (308)
17 cd08300 alcohol_DH_class_III c 100.0 1.1E-37 2.5E-42 279.3 28.1 275 1-283 3-347 (368)
18 cd08301 alcohol_DH_plants Plan 100.0 1.1E-37 2.4E-42 279.5 27.1 275 1-283 3-348 (369)
19 PLN02827 Alcohol dehydrogenase 100.0 1.4E-37 3E-42 279.4 27.4 272 1-283 13-354 (378)
20 cd08237 ribitol-5-phosphate_DH 100.0 7.5E-38 1.6E-42 277.7 24.6 267 2-283 4-314 (341)
21 cd08230 glucose_DH Glucose deh 100.0 2.7E-37 5.8E-42 275.7 26.9 273 1-283 1-334 (355)
22 cd08291 ETR_like_1 2-enoyl thi 100.0 5.1E-37 1.1E-41 270.6 28.3 270 1-283 1-302 (324)
23 KOG0025 Zn2+-binding dehydroge 100.0 2.5E-37 5.5E-42 254.1 23.7 271 2-283 21-328 (354)
24 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-36 2.5E-41 272.9 28.2 275 2-283 6-325 (375)
25 cd08277 liver_alcohol_DH_like 100.0 3E-36 6.6E-41 269.8 30.0 274 1-283 3-344 (365)
26 TIGR02819 fdhA_non_GSH formald 100.0 1.7E-36 3.7E-41 273.2 28.0 272 1-283 3-368 (393)
27 PLN02514 cinnamyl-alcohol dehy 100.0 3.3E-36 7.2E-41 268.7 28.8 274 1-283 10-327 (357)
28 cd08292 ETR_like_2 2-enoyl thi 100.0 8.6E-36 1.9E-40 262.3 29.2 271 1-283 1-302 (324)
29 PRK10309 galactitol-1-phosphat 100.0 9.7E-36 2.1E-40 264.8 28.9 272 1-283 1-323 (347)
30 cd08233 butanediol_DH_like (2R 100.0 7.9E-36 1.7E-40 265.8 27.9 275 1-283 1-327 (351)
31 TIGR03201 dearomat_had 6-hydro 100.0 8.8E-36 1.9E-40 265.3 27.7 271 4-283 2-326 (349)
32 COG1063 Tdh Threonine dehydrog 100.0 8.6E-36 1.9E-40 264.4 26.0 274 1-283 1-326 (350)
33 cd08238 sorbose_phosphate_red 100.0 3.8E-35 8.2E-40 266.4 28.1 277 1-283 3-346 (410)
34 cd08296 CAD_like Cinnamyl alco 100.0 2.5E-34 5.5E-39 254.3 30.3 274 1-283 1-311 (333)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 3.1E-34 6.8E-39 255.5 28.5 274 1-283 1-327 (351)
36 cd08231 MDR_TM0436_like Hypoth 100.0 4.8E-34 1E-38 255.2 29.5 274 2-283 2-339 (361)
37 cd08274 MDR9 Medium chain dehy 100.0 6.2E-34 1.3E-38 253.3 29.5 280 1-283 1-327 (350)
38 cd08295 double_bond_reductase_ 100.0 6.7E-34 1.5E-38 252.1 28.0 255 14-283 19-315 (338)
39 cd05284 arabinose_DH_like D-ar 100.0 1.2E-33 2.6E-38 250.5 29.5 275 1-283 1-317 (340)
40 cd08293 PTGR2 Prostaglandin re 100.0 6.3E-34 1.4E-38 252.9 27.4 257 14-283 21-322 (345)
41 PRK10083 putative oxidoreducta 100.0 1E-33 2.2E-38 251.0 28.1 274 1-283 1-313 (339)
42 PLN03154 putative allyl alcoho 100.0 3.1E-33 6.8E-38 248.6 30.2 255 14-283 25-322 (348)
43 cd08294 leukotriene_B4_DH_like 100.0 2.7E-33 5.9E-38 247.0 28.7 261 1-283 3-306 (329)
44 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.3E-33 7.1E-38 247.3 29.1 271 2-283 1-309 (336)
45 PRK09422 ethanol-active dehydr 100.0 9.8E-33 2.1E-37 244.5 29.2 274 1-283 1-313 (338)
46 TIGR02825 B4_12hDH leukotriene 100.0 4.7E-33 1E-37 245.4 27.0 248 14-283 17-303 (325)
47 cd08297 CAD3 Cinnamyl alcohol 100.0 1.7E-32 3.6E-37 243.4 30.6 276 1-282 1-317 (341)
48 cd08278 benzyl_alcohol_DH Benz 100.0 3.2E-33 7E-38 250.3 26.2 274 1-283 3-344 (365)
49 cd08290 ETR 2-enoyl thioester 100.0 7.3E-33 1.6E-37 245.6 28.0 271 1-281 1-313 (341)
50 cd08240 6_hydroxyhexanoate_dh_ 100.0 8.4E-33 1.8E-37 246.2 28.4 277 1-283 1-327 (350)
51 cd08299 alcohol_DH_class_I_II_ 100.0 6.9E-33 1.5E-37 248.7 27.9 274 1-283 8-351 (373)
52 cd08244 MDR_enoyl_red Possible 100.0 2.5E-32 5.4E-37 240.2 30.7 273 1-283 1-301 (324)
53 PRK13771 putative alcohol dehy 100.0 8.1E-33 1.7E-37 244.6 27.3 274 1-283 1-310 (334)
54 cd08270 MDR4 Medium chain dehy 100.0 3.9E-32 8.6E-37 237.0 31.0 261 1-283 1-282 (305)
55 cd08246 crotonyl_coA_red croto 100.0 1.2E-32 2.5E-37 249.1 28.5 281 1-283 13-369 (393)
56 PRK10754 quinone oxidoreductas 100.0 2.3E-32 4.9E-37 241.1 29.1 270 1-283 2-304 (327)
57 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.1E-32 2.4E-37 245.5 27.2 275 1-283 1-329 (350)
58 cd08283 FDH_like_1 Glutathione 100.0 1.9E-32 4.1E-37 247.0 28.7 274 1-283 1-362 (386)
59 PTZ00354 alcohol dehydrogenase 100.0 3.7E-32 8E-37 240.0 29.7 270 1-283 2-305 (334)
60 cd08248 RTN4I1 Human Reticulon 100.0 2.7E-32 5.8E-37 242.7 28.8 274 1-283 1-328 (350)
61 cd08259 Zn_ADH5 Alcohol dehydr 100.0 3.5E-32 7.6E-37 239.9 28.9 275 1-283 1-310 (332)
62 cd08262 Zn_ADH8 Alcohol dehydr 100.0 4.5E-32 9.7E-37 240.6 29.3 274 1-283 1-319 (341)
63 cd05278 FDH_like Formaldehyde 100.0 2.3E-32 5E-37 242.9 27.5 273 1-282 1-322 (347)
64 TIGR01751 crot-CoA-red crotony 100.0 4.1E-32 9E-37 245.8 29.1 281 1-283 8-364 (398)
65 cd08250 Mgc45594_like Mgc45594 100.0 8E-32 1.7E-36 237.7 29.8 267 1-283 2-307 (329)
66 cd05283 CAD1 Cinnamyl alcohol 100.0 5.9E-32 1.3E-36 239.6 28.5 273 2-283 1-315 (337)
67 cd08286 FDH_like_ADH2 formalde 100.0 5.3E-32 1.1E-36 240.6 28.1 274 1-283 1-320 (345)
68 cd05279 Zn_ADH1 Liver alcohol 100.0 4E-32 8.7E-37 243.2 27.1 273 2-283 2-344 (365)
69 cd08263 Zn_ADH10 Alcohol dehyd 100.0 8.2E-32 1.8E-36 241.4 28.8 274 1-283 1-345 (367)
70 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-31 3.8E-36 236.1 30.2 275 1-282 1-314 (338)
71 cd08260 Zn_ADH6 Alcohol dehydr 100.0 9.8E-32 2.1E-36 238.8 28.6 275 1-283 1-322 (345)
72 cd08242 MDR_like Medium chain 100.0 7.3E-32 1.6E-36 237.1 27.2 264 1-283 1-297 (319)
73 cd08279 Zn_ADH_class_III Class 100.0 9.8E-32 2.1E-36 240.5 28.4 274 1-283 1-342 (363)
74 cd08249 enoyl_reductase_like e 100.0 4.7E-32 1E-36 240.4 25.7 273 1-282 1-312 (339)
75 cd08298 CAD2 Cinnamyl alcohol 100.0 3.2E-31 6.8E-36 234.0 30.6 273 1-283 1-308 (329)
76 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.7E-31 3.6E-36 236.6 28.7 272 1-283 1-313 (337)
77 cd08235 iditol_2_DH_like L-idi 100.0 2.8E-31 6.1E-36 235.6 29.0 272 1-282 1-321 (343)
78 cd08284 FDH_like_2 Glutathione 100.0 2E-31 4.3E-36 236.7 27.8 271 1-282 1-321 (344)
79 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.4E-31 7.4E-36 233.1 28.8 235 1-244 1-245 (325)
80 cd08276 MDR7 Medium chain dehy 100.0 8.9E-31 1.9E-35 231.2 31.0 278 1-283 1-313 (336)
81 cd08287 FDH_like_ADH3 formalde 100.0 2.8E-31 6E-36 235.9 27.7 273 1-283 1-323 (345)
82 cd08282 PFDH_like Pseudomonas 100.0 2.2E-31 4.7E-36 239.3 27.0 272 1-283 1-353 (375)
83 cd08243 quinone_oxidoreductase 100.0 6.5E-31 1.4E-35 230.5 29.1 273 1-283 1-298 (320)
84 KOG1198 Zinc-binding oxidoredu 100.0 2.3E-31 5.1E-36 233.7 25.3 258 16-283 19-322 (347)
85 cd08272 MDR6 Medium chain dehy 100.0 1E-30 2.2E-35 229.5 29.4 273 1-283 1-303 (326)
86 PRK05396 tdh L-threonine 3-deh 100.0 4.7E-31 1E-35 234.2 27.1 275 1-283 1-318 (341)
87 cd05289 MDR_like_2 alcohol deh 100.0 2.2E-30 4.8E-35 225.6 30.5 273 1-283 1-288 (309)
88 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.7E-30 3.7E-35 229.5 30.2 279 1-283 1-319 (342)
89 cd08234 threonine_DH_like L-th 100.0 1.5E-30 3.2E-35 230.1 29.7 272 1-283 1-313 (334)
90 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.1E-31 1.1E-35 232.3 26.6 270 1-283 1-305 (325)
91 cd08236 sugar_DH NAD(P)-depend 100.0 9.5E-31 2E-35 232.3 28.4 272 1-283 1-321 (343)
92 cd05282 ETR_like 2-enoyl thioe 100.0 1E-30 2.3E-35 229.8 28.2 266 6-283 3-301 (323)
93 cd08273 MDR8 Medium chain dehy 100.0 1.6E-30 3.5E-35 229.4 29.1 267 2-283 2-309 (331)
94 cd08252 AL_MDR Arginate lyase 100.0 2.6E-30 5.7E-35 228.6 30.3 268 1-278 1-306 (336)
95 cd05276 p53_inducible_oxidored 100.0 2.9E-30 6.4E-35 225.8 28.4 270 1-283 1-302 (323)
96 TIGR02823 oxido_YhdH putative 100.0 4.8E-30 1E-34 225.8 29.2 272 2-283 1-300 (323)
97 cd05285 sorbitol_DH Sorbitol d 100.0 3.6E-30 7.9E-35 228.7 27.3 273 3-283 1-319 (343)
98 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1E-29 2.2E-34 222.4 29.0 262 1-271 1-306 (306)
99 cd08288 MDR_yhdh Yhdh putative 100.0 2.3E-29 5E-34 221.5 30.7 273 1-283 1-301 (324)
100 cd05281 TDH Threonine dehydrog 100.0 7.3E-30 1.6E-34 226.5 27.2 274 1-282 1-318 (341)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 4.7E-30 1E-34 226.1 25.6 235 1-244 1-245 (326)
102 cd08253 zeta_crystallin Zeta-c 100.0 1.4E-29 3E-34 221.9 28.3 275 1-283 1-302 (325)
103 cd08247 AST1_like AST1 is a cy 100.0 2.3E-29 5E-34 224.2 30.1 273 1-283 1-329 (352)
104 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.2E-29 2.7E-34 228.5 28.2 264 16-283 39-363 (384)
105 cd08269 Zn_ADH9 Alcohol dehydr 100.0 6.7E-30 1.5E-34 223.6 25.6 253 16-283 7-289 (312)
106 cd08271 MDR5 Medium chain dehy 100.0 3.5E-29 7.5E-34 219.9 30.2 271 1-283 1-302 (325)
107 cd08232 idonate-5-DH L-idonate 100.0 1.3E-29 2.7E-34 224.7 27.6 271 5-283 2-316 (339)
108 PLN02702 L-idonate 5-dehydroge 100.0 4.6E-29 1E-33 223.3 29.7 275 1-283 18-339 (364)
109 cd08245 CAD Cinnamyl alcohol d 100.0 3.6E-29 7.8E-34 221.0 28.5 273 2-283 1-309 (330)
110 cd05286 QOR2 Quinone oxidoredu 100.0 5.6E-29 1.2E-33 217.4 29.2 267 2-283 1-297 (320)
111 TIGR00692 tdh L-threonine 3-de 100.0 1.7E-29 3.7E-34 224.1 25.8 269 7-283 5-318 (340)
112 cd08267 MDR1 Medium chain dehy 100.0 7E-29 1.5E-33 217.5 28.9 270 5-283 2-298 (319)
113 COG2130 Putative NADP-dependen 100.0 1.1E-29 2.4E-34 211.0 21.4 244 14-277 25-309 (340)
114 TIGR02824 quinone_pig3 putativ 100.0 9E-29 2E-33 216.9 28.6 270 1-283 1-302 (325)
115 cd08251 polyketide_synthase po 100.0 4.3E-29 9.4E-34 217.0 25.6 251 24-283 2-282 (303)
116 TIGR03366 HpnZ_proposed putati 100.0 1.4E-29 3.1E-34 218.7 21.8 219 63-283 1-277 (280)
117 cd08268 MDR2 Medium chain dehy 100.0 2.1E-28 4.6E-33 214.8 28.1 275 1-283 1-305 (328)
118 cd05288 PGDH Prostaglandin deh 100.0 3E-28 6.5E-33 214.8 28.1 265 2-282 3-307 (329)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.3E-27 2.8E-32 209.3 29.7 269 1-283 1-301 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 4.3E-27 9.3E-32 207.7 29.2 268 2-283 1-314 (337)
121 cd05188 MDR Medium chain reduc 100.0 4.1E-27 8.8E-32 201.4 25.6 212 31-245 1-235 (271)
122 cd05195 enoyl_red enoyl reduct 100.0 9.3E-27 2E-31 200.6 24.4 239 30-283 1-272 (293)
123 smart00829 PKS_ER Enoylreducta 99.9 5.5E-26 1.2E-30 195.6 23.4 234 34-283 2-267 (288)
124 cd08255 2-desacetyl-2-hydroxye 99.9 2.1E-24 4.5E-29 186.0 21.9 210 57-283 17-255 (277)
125 KOG1196 Predicted NAD-dependen 99.9 6E-22 1.3E-26 164.5 22.8 236 25-276 33-310 (343)
126 KOG1202 Animal-type fatty acid 99.9 2.6E-22 5.6E-27 189.8 12.8 248 14-282 1427-1717(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.8 8.7E-18 1.9E-22 124.5 10.8 91 29-120 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.4 1E-12 2.2E-17 100.2 10.6 108 162-270 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.0 6.6E-09 1.4E-13 95.8 12.1 95 148-244 162-287 (509)
130 cd00401 AdoHcyase S-adenosyl-L 98.9 1E-08 2.2E-13 92.3 11.1 125 148-280 199-343 (413)
131 PF13602 ADH_zinc_N_2: Zinc-bi 98.6 1.2E-08 2.5E-13 77.3 1.7 87 195-283 1-106 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.3 5.7E-06 1.2E-10 76.4 10.5 93 149-243 162-285 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.2 1.9E-05 4E-10 71.6 10.7 99 139-245 198-302 (425)
134 PRK00517 prmA ribosomal protei 98.1 2.3E-05 5E-10 66.6 9.7 144 80-243 65-214 (250)
135 PRK08306 dipicolinate synthase 98.1 9.2E-05 2E-09 64.4 12.9 91 150-245 151-244 (296)
136 COG2518 Pcm Protein-L-isoaspar 98.0 0.00011 2.5E-09 59.7 11.4 99 142-244 64-171 (209)
137 TIGR00936 ahcY adenosylhomocys 98.0 7.7E-05 1.7E-09 67.2 10.9 90 148-245 192-285 (406)
138 PLN02494 adenosylhomocysteinas 97.8 9.1E-05 2E-09 67.5 8.8 88 149-244 252-343 (477)
139 PRK11873 arsM arsenite S-adeno 97.8 0.00022 4.9E-09 61.3 10.2 97 145-244 72-185 (272)
140 cd05213 NAD_bind_Glutamyl_tRNA 97.8 6.7E-05 1.5E-09 65.8 7.0 106 115-225 139-249 (311)
141 PF11017 DUF2855: Protein of u 97.7 0.0012 2.7E-08 57.2 13.9 167 70-244 39-233 (314)
142 TIGR00518 alaDH alanine dehydr 97.6 0.00044 9.4E-09 62.1 9.7 93 150-244 166-269 (370)
143 PF02353 CMAS: Mycolic acid cy 97.5 0.00031 6.7E-09 60.4 6.9 96 143-241 55-165 (273)
144 PF01488 Shikimate_DH: Shikima 97.5 0.00048 1E-08 52.7 7.0 93 148-244 9-111 (135)
145 PTZ00075 Adenosylhomocysteinas 97.4 0.00074 1.6E-08 61.8 9.0 89 148-244 251-343 (476)
146 PRK08324 short chain dehydroge 97.4 0.00077 1.7E-08 65.6 9.7 109 104-223 385-507 (681)
147 PRK12771 putative glutamate sy 97.4 0.00021 4.5E-09 68.0 5.5 76 147-224 133-232 (564)
148 COG0300 DltE Short-chain dehyd 97.4 0.00074 1.6E-08 57.3 8.0 75 148-223 3-93 (265)
149 PF12847 Methyltransf_18: Meth 97.4 0.0012 2.7E-08 48.2 8.2 90 150-241 1-110 (112)
150 TIGR00406 prmA ribosomal prote 97.4 0.0026 5.6E-08 55.2 11.4 92 148-242 157-259 (288)
151 COG2230 Cfa Cyclopropane fatty 97.4 0.0019 4.1E-08 55.2 10.1 98 144-244 66-178 (283)
152 PRK00377 cbiT cobalt-precorrin 97.4 0.0024 5.1E-08 52.2 10.4 95 144-240 34-143 (198)
153 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0026 5.7E-08 53.1 10.8 94 150-244 4-137 (238)
154 TIGR02469 CbiT precorrin-6Y C5 97.3 0.0057 1.2E-07 45.4 11.4 97 144-242 13-122 (124)
155 TIGR02853 spore_dpaA dipicolin 97.3 0.0015 3.4E-08 56.5 9.2 91 150-245 150-243 (287)
156 COG3967 DltE Short-chain dehyd 97.3 0.0009 1.9E-08 54.0 6.8 73 150-223 4-87 (245)
157 PRK00045 hemA glutamyl-tRNA re 97.3 0.0017 3.7E-08 59.5 9.7 148 63-224 91-252 (423)
158 COG4221 Short-chain alcohol de 97.3 0.0013 2.9E-08 54.6 8.0 73 150-223 5-90 (246)
159 COG2242 CobL Precorrin-6B meth 97.3 0.0056 1.2E-07 48.9 10.9 96 144-242 28-135 (187)
160 PRK12742 oxidoreductase; Provi 97.2 0.0042 9.2E-08 51.8 10.6 73 150-223 5-84 (237)
161 PRK13942 protein-L-isoaspartat 97.2 0.0092 2E-07 49.3 12.0 100 142-243 68-177 (212)
162 PRK13943 protein-L-isoaspartat 97.1 0.0057 1.2E-07 53.8 10.9 97 142-241 72-179 (322)
163 PRK11705 cyclopropane fatty ac 97.1 0.0033 7.3E-08 56.7 9.7 101 139-242 155-267 (383)
164 PF01135 PCMT: Protein-L-isoas 97.1 0.0024 5.2E-08 52.6 7.6 98 142-243 64-173 (209)
165 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0047 1E-07 49.6 8.7 108 148-275 33-148 (178)
166 PF13460 NAD_binding_10: NADH( 97.0 0.005 1.1E-07 49.2 8.8 88 154-245 1-100 (183)
167 PRK13944 protein-L-isoaspartat 96.9 0.018 3.8E-07 47.4 11.5 98 143-242 65-173 (205)
168 COG2226 UbiE Methylase involve 96.9 0.01 2.2E-07 49.7 9.9 99 145-245 46-159 (238)
169 PRK00107 gidB 16S rRNA methylt 96.8 0.015 3.3E-07 47.0 10.1 94 148-244 43-147 (187)
170 PF00670 AdoHcyase_NAD: S-aden 96.8 0.016 3.5E-07 45.4 9.5 91 147-245 19-113 (162)
171 PRK07060 short chain dehydroge 96.8 0.0069 1.5E-07 50.7 8.2 74 149-223 7-86 (245)
172 TIGR00080 pimt protein-L-isoas 96.8 0.034 7.3E-07 46.0 12.1 100 142-243 69-178 (215)
173 PRK08317 hypothetical protein; 96.8 0.019 4.1E-07 47.8 10.7 97 144-242 13-124 (241)
174 TIGR01035 hemA glutamyl-tRNA r 96.8 0.015 3.3E-07 53.2 10.8 148 63-224 89-250 (417)
175 CHL00194 ycf39 Ycf39; Provisio 96.8 0.0097 2.1E-07 52.3 9.2 90 153-243 2-110 (317)
176 PRK06182 short chain dehydroge 96.7 0.0084 1.8E-07 51.3 8.6 73 150-223 2-83 (273)
177 PRK06057 short chain dehydroge 96.7 0.0089 1.9E-07 50.6 8.2 74 149-223 5-88 (255)
178 PRK05993 short chain dehydroge 96.7 0.011 2.5E-07 50.7 8.8 73 150-223 3-85 (277)
179 PRK05872 short chain dehydroge 96.6 0.0092 2E-07 51.9 7.9 73 150-223 8-94 (296)
180 PRK05693 short chain dehydroge 96.6 0.0095 2.1E-07 51.0 8.0 71 152-223 2-81 (274)
181 PLN03209 translocon at the inn 96.6 0.0053 1.1E-07 57.7 6.7 79 145-224 74-169 (576)
182 cd01078 NAD_bind_H4MPT_DH NADP 96.6 0.01 2.2E-07 48.2 7.7 75 149-224 26-107 (194)
183 PRK06139 short chain dehydroge 96.6 0.011 2.3E-07 52.4 8.4 74 149-223 5-93 (330)
184 PRK14967 putative methyltransf 96.6 0.049 1.1E-06 45.3 11.9 95 144-242 30-159 (223)
185 PRK08177 short chain dehydroge 96.6 0.011 2.4E-07 49.0 7.9 71 152-223 2-80 (225)
186 PRK06949 short chain dehydroge 96.6 0.013 2.7E-07 49.6 8.3 43 149-192 7-49 (258)
187 PRK07825 short chain dehydroge 96.5 0.014 3E-07 49.9 8.5 73 150-223 4-87 (273)
188 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.011 2.4E-07 50.3 7.8 73 150-223 5-89 (263)
189 PF06325 PrmA: Ribosomal prote 96.5 0.011 2.4E-07 51.3 7.7 91 148-243 159-260 (295)
190 smart00846 Gp_dh_N Glyceraldeh 96.5 0.072 1.6E-06 41.4 11.4 108 153-261 2-137 (149)
191 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.012 2.7E-07 49.9 7.9 44 150-194 4-47 (262)
192 PRK10258 biotin biosynthesis p 96.5 0.034 7.4E-07 47.1 10.5 93 146-242 38-140 (251)
193 PRK05866 short chain dehydroge 96.5 0.018 3.8E-07 50.1 8.7 73 150-223 39-126 (293)
194 PRK06196 oxidoreductase; Provi 96.4 0.016 3.5E-07 50.8 8.4 73 150-223 25-108 (315)
195 PRK14103 trans-aconitate 2-met 96.4 0.041 9E-07 46.7 10.6 95 143-241 22-125 (255)
196 PRK12367 short chain dehydroge 96.4 0.016 3.4E-07 49.0 7.9 72 150-223 13-88 (245)
197 COG2264 PrmA Ribosomal protein 96.4 0.029 6.4E-07 48.5 9.4 142 82-243 109-264 (300)
198 KOG1205 Predicted dehydrogenas 96.4 0.014 3E-07 50.1 7.3 96 149-245 10-152 (282)
199 PRK04148 hypothetical protein; 96.4 0.026 5.6E-07 42.9 8.0 74 148-224 14-87 (134)
200 cd01065 NAD_bind_Shikimate_DH 96.4 0.023 5E-07 44.1 8.2 100 142-243 9-117 (155)
201 PRK07831 short chain dehydroge 96.3 0.025 5.3E-07 48.1 8.7 76 147-223 13-106 (262)
202 PLN02244 tocopherol O-methyltr 96.3 0.057 1.2E-06 48.0 11.2 92 149-243 117-224 (340)
203 PRK05854 short chain dehydroge 96.3 0.023 5.1E-07 49.8 8.6 42 150-192 13-54 (313)
204 PRK07806 short chain dehydroge 96.3 0.061 1.3E-06 45.1 10.9 36 150-186 5-40 (248)
205 PF08241 Methyltransf_11: Meth 96.3 0.013 2.9E-07 40.9 5.8 78 162-240 6-95 (95)
206 PF01262 AlaDh_PNT_C: Alanine 96.3 0.0072 1.6E-07 48.0 4.7 91 151-243 20-140 (168)
207 PRK07814 short chain dehydroge 96.2 0.025 5.5E-07 48.1 8.3 43 149-192 8-50 (263)
208 PRK06180 short chain dehydroge 96.2 0.022 4.8E-07 48.8 8.0 73 150-223 3-87 (277)
209 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.051 1.1E-06 50.2 10.8 73 150-223 209-293 (450)
210 PRK05867 short chain dehydroge 96.2 0.023 5E-07 47.9 8.0 42 150-192 8-49 (253)
211 PF13241 NAD_binding_7: Putati 96.2 0.036 7.9E-07 40.1 7.9 86 150-245 6-94 (103)
212 COG2227 UbiG 2-polyprenyl-3-me 96.2 0.017 3.7E-07 48.0 6.7 89 149-241 58-160 (243)
213 PRK08287 cobalt-precorrin-6Y C 96.2 0.074 1.6E-06 42.9 10.5 94 144-241 25-130 (187)
214 PLN03139 formate dehydrogenase 96.2 0.052 1.1E-06 49.0 10.3 106 150-274 198-311 (386)
215 PRK08339 short chain dehydroge 96.2 0.03 6.6E-07 47.7 8.6 42 150-192 7-48 (263)
216 COG2910 Putative NADH-flavin r 96.2 0.024 5.2E-07 45.1 7.1 91 152-245 1-107 (211)
217 PLN03075 nicotianamine synthas 96.2 0.092 2E-06 45.5 11.3 93 149-242 122-233 (296)
218 PRK12829 short chain dehydroge 96.2 0.024 5.2E-07 48.0 7.9 76 147-223 7-95 (264)
219 COG1748 LYS9 Saccharopine dehy 96.2 0.034 7.3E-07 50.0 8.9 93 152-245 2-102 (389)
220 PRK07832 short chain dehydroge 96.2 0.063 1.4E-06 45.9 10.5 71 152-223 1-87 (272)
221 PRK07062 short chain dehydroge 96.2 0.026 5.5E-07 48.0 8.0 42 150-192 7-48 (265)
222 PRK01683 trans-aconitate 2-met 96.2 0.071 1.5E-06 45.3 10.7 96 143-241 24-129 (258)
223 COG0686 Ald Alanine dehydrogen 96.2 0.016 3.5E-07 49.8 6.4 89 152-242 169-268 (371)
224 PRK07904 short chain dehydroge 96.1 0.035 7.7E-07 47.0 8.6 41 148-188 5-45 (253)
225 PRK09291 short chain dehydroge 96.1 0.031 6.7E-07 47.1 8.2 72 151-223 2-82 (257)
226 PRK06505 enoyl-(acyl carrier p 96.1 0.03 6.5E-07 48.0 8.1 73 150-223 6-94 (271)
227 PF01209 Ubie_methyltran: ubiE 96.1 0.024 5.3E-07 47.5 7.2 99 144-244 41-155 (233)
228 PRK00258 aroE shikimate 5-dehy 96.1 0.029 6.2E-07 48.4 7.9 92 149-243 121-222 (278)
229 PRK07326 short chain dehydroge 96.1 0.035 7.6E-07 46.2 8.3 42 150-192 5-46 (237)
230 PRK06841 short chain dehydroge 96.1 0.031 6.8E-07 47.1 8.0 73 150-223 14-98 (255)
231 PRK07677 short chain dehydroge 96.1 0.03 6.5E-07 47.2 7.9 41 151-192 1-41 (252)
232 PRK07574 formate dehydrogenase 96.1 0.074 1.6E-06 48.0 10.6 106 150-274 191-304 (385)
233 PRK08017 oxidoreductase; Provi 96.1 0.033 7.2E-07 46.9 8.1 71 152-223 3-83 (256)
234 COG2519 GCD14 tRNA(1-methylade 96.0 0.12 2.7E-06 43.3 11.0 101 142-244 86-197 (256)
235 PRK07231 fabG 3-ketoacyl-(acyl 96.0 0.03 6.5E-07 47.0 7.7 42 150-192 4-45 (251)
236 PLN02233 ubiquinone biosynthes 96.0 0.081 1.7E-06 45.2 10.3 99 144-244 67-184 (261)
237 KOG1209 1-Acyl dihydroxyaceton 96.0 0.1 2.2E-06 42.7 10.1 73 150-223 6-90 (289)
238 PRK07478 short chain dehydroge 96.0 0.039 8.4E-07 46.6 8.4 42 150-192 5-46 (254)
239 PRK07453 protochlorophyllide o 96.0 0.036 7.9E-07 48.7 8.4 42 150-192 5-46 (322)
240 PRK07109 short chain dehydroge 96.0 0.042 9.1E-07 48.7 8.8 74 149-223 6-94 (334)
241 PRK03369 murD UDP-N-acetylmura 96.0 0.038 8.2E-07 51.7 8.8 72 148-224 9-80 (488)
242 PRK08265 short chain dehydroge 96.0 0.038 8.2E-07 47.0 8.2 73 150-223 5-89 (261)
243 KOG1201 Hydroxysteroid 17-beta 96.0 0.039 8.4E-07 47.3 8.0 73 149-223 36-123 (300)
244 PRK08340 glucose-1-dehydrogena 96.0 0.044 9.6E-07 46.4 8.5 70 153-223 2-85 (259)
245 PRK06500 short chain dehydroge 96.0 0.041 8.9E-07 46.1 8.2 73 150-223 5-89 (249)
246 PRK07533 enoyl-(acyl carrier p 95.9 0.046 9.9E-07 46.4 8.4 38 150-188 9-48 (258)
247 PRK06194 hypothetical protein; 95.9 0.048 1E-06 46.9 8.6 42 150-192 5-46 (287)
248 PRK07063 short chain dehydroge 95.9 0.043 9.2E-07 46.5 8.2 42 150-192 6-47 (260)
249 PRK07024 short chain dehydroge 95.9 0.05 1.1E-06 46.0 8.5 42 151-193 2-43 (257)
250 PRK09072 short chain dehydroge 95.9 0.049 1.1E-06 46.3 8.4 43 150-193 4-46 (263)
251 PRK13940 glutamyl-tRNA reducta 95.9 0.054 1.2E-06 49.4 9.0 75 147-225 177-253 (414)
252 PRK08862 short chain dehydroge 95.9 0.052 1.1E-06 45.3 8.3 42 150-192 4-45 (227)
253 PRK07523 gluconate 5-dehydroge 95.8 0.048 1.1E-06 46.0 8.2 41 150-191 9-49 (255)
254 PRK07454 short chain dehydroge 95.8 0.061 1.3E-06 44.9 8.7 43 149-192 4-46 (241)
255 PRK06079 enoyl-(acyl carrier p 95.8 0.041 8.9E-07 46.5 7.7 74 149-223 5-92 (252)
256 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.062 1.3E-06 45.1 8.7 73 150-223 4-89 (248)
257 PRK00216 ubiE ubiquinone/menaq 95.8 0.21 4.7E-06 41.5 12.0 98 144-243 45-159 (239)
258 PRK07774 short chain dehydroge 95.8 0.044 9.6E-07 46.0 7.8 42 150-192 5-46 (250)
259 PRK08217 fabG 3-ketoacyl-(acyl 95.8 0.062 1.3E-06 45.0 8.7 42 150-192 4-45 (253)
260 PRK07576 short chain dehydroge 95.8 0.056 1.2E-06 46.0 8.5 42 149-191 7-48 (264)
261 PRK00312 pcm protein-L-isoaspa 95.8 0.25 5.4E-06 40.6 12.1 96 143-243 71-176 (212)
262 COG0169 AroE Shikimate 5-dehyd 95.8 0.045 9.6E-07 47.2 7.7 92 148-242 123-226 (283)
263 PRK06197 short chain dehydroge 95.8 0.049 1.1E-06 47.5 8.2 41 150-191 15-55 (306)
264 PRK12939 short chain dehydroge 95.8 0.057 1.2E-06 45.2 8.4 43 149-192 5-47 (250)
265 PRK08589 short chain dehydroge 95.8 0.053 1.1E-06 46.4 8.1 36 150-186 5-40 (272)
266 PRK05717 oxidoreductase; Valid 95.8 0.058 1.3E-06 45.6 8.3 73 150-223 9-93 (255)
267 PRK08628 short chain dehydroge 95.7 0.053 1.2E-06 45.8 8.1 73 150-223 6-92 (258)
268 PRK08415 enoyl-(acyl carrier p 95.7 0.062 1.3E-06 46.2 8.5 93 150-243 4-144 (274)
269 PRK08643 acetoin reductase; Va 95.7 0.06 1.3E-06 45.4 8.2 41 151-192 2-42 (256)
270 PRK06125 short chain dehydroge 95.7 0.069 1.5E-06 45.2 8.6 42 150-192 6-47 (259)
271 PRK05876 short chain dehydroge 95.7 0.066 1.4E-06 46.0 8.6 43 149-192 4-46 (275)
272 PRK06179 short chain dehydroge 95.7 0.02 4.3E-07 48.8 5.3 71 150-223 3-82 (270)
273 PRK08251 short chain dehydroge 95.7 0.069 1.5E-06 44.8 8.5 41 151-192 2-42 (248)
274 PRK12828 short chain dehydroge 95.7 0.033 7.1E-07 46.3 6.5 39 150-189 6-44 (239)
275 PRK07035 short chain dehydroge 95.7 0.063 1.4E-06 45.2 8.3 42 150-192 7-48 (252)
276 PRK06483 dihydromonapterin red 95.7 0.07 1.5E-06 44.4 8.5 71 151-223 2-83 (236)
277 PRK04266 fibrillarin; Provisio 95.7 0.18 3.8E-06 42.2 10.7 126 144-275 66-205 (226)
278 TIGR03840 TMPT_Se_Te thiopurin 95.7 0.12 2.6E-06 42.8 9.6 91 149-243 33-153 (213)
279 PRK07890 short chain dehydroge 95.7 0.07 1.5E-06 45.0 8.5 43 149-192 3-45 (258)
280 TIGR01809 Shik-DH-AROM shikima 95.7 0.047 1E-06 47.2 7.4 73 150-224 124-200 (282)
281 PRK08267 short chain dehydroge 95.6 0.064 1.4E-06 45.4 8.1 71 152-223 2-86 (260)
282 PRK07424 bifunctional sterol d 95.6 0.032 6.9E-07 50.8 6.5 73 150-223 177-254 (406)
283 TIGR02752 MenG_heptapren 2-hep 95.6 0.17 3.6E-06 42.2 10.5 98 144-243 39-152 (231)
284 PRK08277 D-mannonate oxidoredu 95.6 0.068 1.5E-06 45.8 8.3 42 150-192 9-50 (278)
285 PRK08263 short chain dehydroge 95.6 0.076 1.6E-06 45.5 8.6 72 151-223 3-86 (275)
286 PRK08085 gluconate 5-dehydroge 95.6 0.079 1.7E-06 44.7 8.5 42 150-192 8-49 (254)
287 PRK10538 malonic semialdehyde 95.6 0.075 1.6E-06 44.7 8.4 71 152-223 1-83 (248)
288 PLN02490 MPBQ/MSBQ methyltrans 95.6 0.11 2.5E-06 46.0 9.7 93 149-243 112-216 (340)
289 PLN02253 xanthoxin dehydrogena 95.6 0.066 1.4E-06 45.9 8.1 42 150-192 17-58 (280)
290 PRK13394 3-hydroxybutyrate deh 95.6 0.072 1.6E-06 45.0 8.3 42 150-192 6-47 (262)
291 PRK06603 enoyl-(acyl carrier p 95.6 0.074 1.6E-06 45.2 8.4 37 149-186 6-44 (260)
292 PTZ00098 phosphoethanolamine N 95.6 0.21 4.5E-06 42.7 11.1 99 142-243 44-157 (263)
293 PRK12823 benD 1,6-dihydroxycyc 95.6 0.059 1.3E-06 45.6 7.7 73 150-223 7-93 (260)
294 PRK08213 gluconate 5-dehydroge 95.6 0.075 1.6E-06 45.0 8.3 42 150-192 11-52 (259)
295 PRK05884 short chain dehydroge 95.6 0.062 1.3E-06 44.6 7.6 70 153-223 2-78 (223)
296 COG4122 Predicted O-methyltran 95.6 0.073 1.6E-06 44.0 7.8 95 145-241 54-165 (219)
297 PRK08264 short chain dehydroge 95.6 0.062 1.3E-06 44.7 7.7 71 150-224 5-83 (238)
298 PRK08159 enoyl-(acyl carrier p 95.6 0.074 1.6E-06 45.6 8.3 76 147-223 6-97 (272)
299 PRK06172 short chain dehydroge 95.5 0.077 1.7E-06 44.7 8.3 41 150-191 6-46 (253)
300 PRK08690 enoyl-(acyl carrier p 95.5 0.072 1.6E-06 45.3 8.1 37 149-186 4-42 (261)
301 PRK12384 sorbitol-6-phosphate 95.5 0.075 1.6E-06 44.9 8.2 41 151-192 2-42 (259)
302 PRK05875 short chain dehydroge 95.5 0.078 1.7E-06 45.3 8.3 42 150-192 6-47 (276)
303 PRK06718 precorrin-2 dehydroge 95.5 0.097 2.1E-06 42.9 8.4 89 150-242 9-100 (202)
304 PLN00203 glutamyl-tRNA reducta 95.5 0.22 4.8E-06 46.8 11.7 92 150-245 265-372 (519)
305 PRK06720 hypothetical protein; 95.5 0.12 2.5E-06 41.1 8.6 40 150-190 15-54 (169)
306 PRK12937 short chain dehydroge 95.5 0.21 4.6E-06 41.6 10.7 36 150-186 4-39 (245)
307 PRK09242 tropinone reductase; 95.5 0.095 2.1E-06 44.2 8.6 42 150-192 8-49 (257)
308 PRK07067 sorbitol dehydrogenas 95.4 0.075 1.6E-06 44.9 7.9 43 150-193 5-47 (257)
309 PRK15469 ghrA bifunctional gly 95.4 0.12 2.6E-06 45.4 9.3 85 149-242 134-226 (312)
310 PRK06914 short chain dehydroge 95.4 0.074 1.6E-06 45.6 7.9 42 150-192 2-43 (280)
311 PF00106 adh_short: short chai 95.4 0.048 1E-06 42.7 6.3 72 152-223 1-89 (167)
312 PRK06482 short chain dehydroge 95.4 0.089 1.9E-06 45.0 8.4 71 152-223 3-85 (276)
313 PRK06181 short chain dehydroge 95.4 0.098 2.1E-06 44.3 8.6 41 151-192 1-41 (263)
314 PRK06101 short chain dehydroge 95.4 0.084 1.8E-06 44.2 8.0 43 152-195 2-44 (240)
315 PRK12809 putative oxidoreducta 95.4 0.054 1.2E-06 52.4 7.7 73 150-224 309-405 (639)
316 PRK06114 short chain dehydroge 95.4 0.1 2.3E-06 44.0 8.6 37 150-187 7-43 (254)
317 TIGR03206 benzo_BadH 2-hydroxy 95.4 0.093 2E-06 44.0 8.3 42 150-192 2-43 (250)
318 PRK07856 short chain dehydroge 95.4 0.075 1.6E-06 44.8 7.7 38 150-188 5-42 (252)
319 PRK08226 short chain dehydroge 95.4 0.094 2E-06 44.4 8.3 41 150-191 5-45 (263)
320 PRK13243 glyoxylate reductase; 95.4 0.13 2.9E-06 45.5 9.4 104 150-274 149-260 (333)
321 PRK07502 cyclohexadienyl dehyd 95.4 0.11 2.5E-06 45.3 8.9 88 151-243 6-101 (307)
322 PRK13403 ketol-acid reductoiso 95.3 0.22 4.7E-06 43.7 10.2 90 147-244 12-108 (335)
323 PRK12481 2-deoxy-D-gluconate 3 95.3 0.099 2.1E-06 44.1 8.2 73 150-223 7-92 (251)
324 PRK06138 short chain dehydroge 95.3 0.097 2.1E-06 43.9 8.1 42 150-192 4-45 (252)
325 PRK07074 short chain dehydroge 95.3 0.072 1.6E-06 45.0 7.3 41 151-192 2-42 (257)
326 TIGR01318 gltD_gamma_fam gluta 95.3 0.065 1.4E-06 49.8 7.6 74 149-224 139-236 (467)
327 PRK06484 short chain dehydroge 95.3 0.073 1.6E-06 50.0 8.0 73 150-223 268-352 (520)
328 PRK11207 tellurite resistance 95.3 0.086 1.9E-06 43.0 7.4 93 145-242 25-134 (197)
329 PLN02928 oxidoreductase family 95.3 0.12 2.6E-06 46.1 8.9 91 149-242 157-262 (347)
330 PRK06398 aldose dehydrogenase; 95.2 0.065 1.4E-06 45.4 6.9 38 150-188 5-42 (258)
331 PRK06719 precorrin-2 dehydroge 95.2 0.21 4.5E-06 39.2 9.1 84 149-239 11-97 (157)
332 KOG0725 Reductases with broad 95.2 0.066 1.4E-06 46.0 6.8 44 149-193 6-49 (270)
333 PRK07102 short chain dehydroge 95.2 0.11 2.3E-06 43.5 8.1 40 152-192 2-41 (243)
334 PRK06953 short chain dehydroge 95.2 0.1 2.2E-06 43.1 7.8 71 152-223 2-79 (222)
335 TIGR01934 MenG_MenH_UbiE ubiqu 95.2 0.29 6.4E-06 40.2 10.6 98 144-244 33-145 (223)
336 TIGR01470 cysG_Nterm siroheme 95.2 0.4 8.7E-06 39.3 11.1 89 150-242 8-100 (205)
337 PRK07402 precorrin-6B methylas 95.2 0.32 7E-06 39.4 10.6 97 144-242 34-142 (196)
338 PRK12429 3-hydroxybutyrate deh 95.2 0.13 2.9E-06 43.2 8.7 42 150-192 3-44 (258)
339 TIGR00438 rrmJ cell division p 95.2 0.18 4E-06 40.6 9.1 92 145-242 27-146 (188)
340 PF01118 Semialdhyde_dh: Semia 95.2 0.08 1.7E-06 39.5 6.4 89 153-244 1-99 (121)
341 PRK06198 short chain dehydroge 95.2 0.11 2.4E-06 43.8 8.1 74 149-223 4-93 (260)
342 PRK08993 2-deoxy-D-gluconate 3 95.2 0.12 2.6E-06 43.6 8.3 73 150-223 9-94 (253)
343 COG1052 LdhA Lactate dehydroge 95.1 0.14 3E-06 45.1 8.7 84 150-242 145-236 (324)
344 TIGR01777 yfcH conserved hypot 95.1 0.026 5.6E-07 48.5 4.2 66 154-223 1-66 (292)
345 PRK06463 fabG 3-ketoacyl-(acyl 95.1 0.13 2.9E-06 43.3 8.5 73 150-223 6-88 (255)
346 PRK08303 short chain dehydroge 95.1 0.11 2.4E-06 45.4 8.2 35 150-185 7-41 (305)
347 PRK12550 shikimate 5-dehydroge 95.1 0.23 5E-06 42.7 9.9 73 142-223 113-187 (272)
348 PRK06124 gluconate 5-dehydroge 95.1 0.15 3.3E-06 42.9 8.8 41 150-191 10-50 (256)
349 PRK07985 oxidoreductase; Provi 95.1 0.23 5E-06 43.1 10.0 36 149-185 47-82 (294)
350 TIGR00507 aroE shikimate 5-deh 95.1 0.23 5E-06 42.6 9.9 90 148-243 114-215 (270)
351 PRK06113 7-alpha-hydroxysteroi 95.1 0.13 2.9E-06 43.4 8.3 42 150-192 10-51 (255)
352 PRK07791 short chain dehydroge 95.1 0.16 3.4E-06 43.9 8.9 37 149-186 4-40 (286)
353 PRK06935 2-deoxy-D-gluconate 3 95.1 0.13 2.9E-06 43.4 8.3 36 149-185 13-48 (258)
354 TIGR01289 LPOR light-dependent 95.1 0.12 2.7E-06 45.2 8.3 41 151-192 3-44 (314)
355 PRK07984 enoyl-(acyl carrier p 95.1 0.13 2.9E-06 43.8 8.3 37 149-186 4-42 (262)
356 PRK05653 fabG 3-ketoacyl-(acyl 95.1 0.15 3.2E-06 42.4 8.5 42 150-192 4-45 (246)
357 TIGR00452 methyltransferase, p 95.0 0.29 6.2E-06 43.0 10.4 94 144-241 115-224 (314)
358 PRK06077 fabG 3-ketoacyl-(acyl 95.0 0.35 7.6E-06 40.5 10.6 34 150-184 5-38 (252)
359 PRK06484 short chain dehydroge 95.0 0.11 2.4E-06 48.8 8.3 73 150-223 4-88 (520)
360 PRK07097 gluconate 5-dehydroge 95.0 0.15 3.3E-06 43.3 8.4 42 150-192 9-50 (265)
361 COG0373 HemA Glutamyl-tRNA red 95.0 0.61 1.3E-05 42.4 12.4 95 146-245 173-277 (414)
362 PF03446 NAD_binding_2: NAD bi 95.0 0.25 5.4E-06 38.9 9.1 66 152-224 2-67 (163)
363 cd05311 NAD_bind_2_malic_enz N 95.0 0.46 1E-05 39.6 11.0 98 141-244 14-130 (226)
364 PRK12936 3-ketoacyl-(acyl-carr 95.0 0.16 3.4E-06 42.3 8.4 73 150-223 5-89 (245)
365 TIGR01532 E4PD_g-proteo D-eryt 95.0 0.55 1.2E-05 41.4 11.9 93 153-246 1-124 (325)
366 TIGR00138 gidB 16S rRNA methyl 94.9 0.27 5.8E-06 39.5 9.2 90 150-242 42-142 (181)
367 PRK11036 putative S-adenosyl-L 94.9 0.15 3.3E-06 43.2 8.3 89 149-241 43-148 (255)
368 PLN02780 ketoreductase/ oxidor 94.9 0.066 1.4E-06 47.2 6.2 42 150-192 52-93 (320)
369 PF03435 Saccharop_dh: Sacchar 94.9 0.11 2.3E-06 47.1 7.7 88 154-242 1-98 (386)
370 PLN00141 Tic62-NAD(P)-related 94.9 0.09 1.9E-06 44.4 6.8 74 149-223 15-94 (251)
371 PRK12826 3-ketoacyl-(acyl-carr 94.9 0.16 3.6E-06 42.4 8.3 40 150-190 5-44 (251)
372 PRK12549 shikimate 5-dehydroge 94.9 0.13 2.8E-06 44.6 7.7 90 149-242 125-227 (284)
373 KOG1014 17 beta-hydroxysteroid 94.9 0.11 2.4E-06 44.8 7.0 73 149-223 47-135 (312)
374 PRK05650 short chain dehydroge 94.8 0.17 3.7E-06 43.1 8.4 39 152-191 1-39 (270)
375 PRK07775 short chain dehydroge 94.8 0.18 3.8E-06 43.2 8.5 41 150-191 9-49 (274)
376 PRK12769 putative oxidoreducta 94.8 0.095 2.1E-06 50.9 7.5 74 149-224 325-422 (654)
377 PRK14027 quinate/shikimate deh 94.8 0.12 2.6E-06 44.7 7.2 73 149-223 125-203 (283)
378 cd01080 NAD_bind_m-THF_DH_Cycl 94.8 0.22 4.7E-06 39.6 8.2 95 130-245 22-119 (168)
379 PRK14175 bifunctional 5,10-met 94.8 0.27 5.8E-06 42.5 9.3 95 131-245 137-233 (286)
380 PLN02427 UDP-apiose/xylose syn 94.8 0.13 2.9E-06 46.4 7.9 78 146-223 9-95 (386)
381 PLN02396 hexaprenyldihydroxybe 94.8 0.18 3.8E-06 44.5 8.3 91 148-242 129-235 (322)
382 PRK08618 ornithine cyclodeamin 94.8 0.5 1.1E-05 41.7 11.3 96 144-244 120-223 (325)
383 PRK08410 2-hydroxyacid dehydro 94.7 0.19 4.1E-06 44.2 8.4 81 150-242 144-232 (311)
384 PRK06523 short chain dehydroge 94.7 0.13 2.9E-06 43.4 7.4 38 150-188 8-45 (260)
385 PLN02336 phosphoethanolamine N 94.7 0.41 8.9E-06 44.6 11.2 95 145-242 261-369 (475)
386 PF05368 NmrA: NmrA-like famil 94.7 0.11 2.5E-06 43.2 6.8 68 154-223 1-73 (233)
387 KOG1210 Predicted 3-ketosphing 94.7 0.11 2.5E-06 44.8 6.7 79 145-224 27-122 (331)
388 PLN02986 cinnamyl-alcohol dehy 94.7 0.16 3.5E-06 44.5 8.0 73 150-223 4-86 (322)
389 PRK12743 oxidoreductase; Provi 94.7 0.21 4.5E-06 42.2 8.5 72 151-223 2-89 (256)
390 cd01075 NAD_bind_Leu_Phe_Val_D 94.6 0.25 5.4E-06 40.4 8.4 67 149-222 26-93 (200)
391 PRK08219 short chain dehydroge 94.6 0.21 4.5E-06 41.1 8.2 71 151-223 3-80 (227)
392 KOG1199 Short-chain alcohol de 94.6 0.17 3.7E-06 39.9 6.9 73 150-223 8-92 (260)
393 PLN02896 cinnamyl-alcohol dehy 94.6 0.19 4.2E-06 44.7 8.4 76 147-223 6-88 (353)
394 PRK13256 thiopurine S-methyltr 94.6 1 2.2E-05 37.6 11.9 94 146-243 39-164 (226)
395 TIGR00477 tehB tellurite resis 94.5 0.3 6.4E-06 39.7 8.7 91 146-241 26-132 (195)
396 PRK08594 enoyl-(acyl carrier p 94.5 0.18 4E-06 42.7 7.8 35 150-185 6-42 (257)
397 PLN02657 3,8-divinyl protochlo 94.5 0.13 2.9E-06 46.6 7.2 42 146-188 55-96 (390)
398 PRK06128 oxidoreductase; Provi 94.5 0.21 4.5E-06 43.4 8.3 36 149-185 53-88 (300)
399 PRK07340 ornithine cyclodeamin 94.5 0.22 4.8E-06 43.5 8.4 97 146-244 120-219 (304)
400 PRK13255 thiopurine S-methyltr 94.5 0.46 1E-05 39.4 9.8 91 147-241 34-154 (218)
401 KOG1208 Dehydrogenases with di 94.5 0.17 3.7E-06 44.4 7.6 94 149-243 33-171 (314)
402 PLN02989 cinnamyl-alcohol dehy 94.5 0.18 3.9E-06 44.2 7.8 73 150-223 4-86 (325)
403 KOG1502 Flavonol reductase/cin 94.4 0.2 4.3E-06 43.9 7.7 73 150-223 5-87 (327)
404 PF08704 GCD14: tRNA methyltra 94.4 0.3 6.6E-06 41.3 8.6 100 143-244 33-148 (247)
405 PRK08063 enoyl-(acyl carrier p 94.4 0.23 5E-06 41.6 8.1 39 150-189 3-42 (250)
406 PRK12480 D-lactate dehydrogena 94.4 0.43 9.4E-06 42.3 9.9 82 150-242 145-234 (330)
407 PRK08416 7-alpha-hydroxysteroi 94.3 0.27 5.9E-06 41.6 8.5 41 149-190 6-47 (260)
408 PRK05565 fabG 3-ketoacyl-(acyl 94.3 0.17 3.6E-06 42.2 7.1 41 151-192 5-46 (247)
409 PRK07370 enoyl-(acyl carrier p 94.3 0.2 4.3E-06 42.5 7.6 34 150-184 5-40 (258)
410 PRK08261 fabG 3-ketoacyl-(acyl 94.3 0.023 4.9E-07 52.5 1.9 82 144-244 27-125 (450)
411 PRK06997 enoyl-(acyl carrier p 94.3 0.23 5E-06 42.2 7.9 73 150-223 5-93 (260)
412 PRK11908 NAD-dependent epimera 94.3 0.13 2.8E-06 45.7 6.6 72 152-223 2-77 (347)
413 PF02558 ApbA: Ketopantoate re 94.3 0.15 3.2E-06 39.4 6.2 85 154-241 1-100 (151)
414 PRK14191 bifunctional 5,10-met 94.3 0.28 6.2E-06 42.2 8.3 94 131-244 136-231 (285)
415 PRK08703 short chain dehydroge 94.3 0.13 2.8E-06 42.9 6.3 42 150-192 5-46 (239)
416 PRK05599 hypothetical protein; 94.3 0.25 5.4E-06 41.5 8.1 70 152-223 1-86 (246)
417 PRK08945 putative oxoacyl-(acy 94.3 0.13 2.9E-06 43.1 6.4 45 147-192 8-52 (247)
418 PRK05855 short chain dehydroge 94.3 0.2 4.4E-06 47.5 8.3 73 150-223 314-401 (582)
419 PRK00811 spermidine synthase; 94.3 0.25 5.4E-06 42.8 8.0 92 149-242 75-191 (283)
420 TIGR02632 RhaD_aldol-ADH rhamn 94.2 0.22 4.8E-06 48.5 8.5 42 150-192 413-454 (676)
421 TIGR03589 PseB UDP-N-acetylglu 94.2 0.17 3.6E-06 44.6 7.0 74 150-223 3-83 (324)
422 PRK06171 sorbitol-6-phosphate 94.2 0.16 3.5E-06 43.0 6.8 39 150-189 8-46 (266)
423 PF02670 DXP_reductoisom: 1-de 94.2 0.22 4.9E-06 37.5 6.6 87 154-240 1-119 (129)
424 PF13847 Methyltransf_31: Meth 94.1 0.21 4.5E-06 38.7 6.8 93 149-243 2-111 (152)
425 PRK08278 short chain dehydroge 94.1 0.3 6.5E-06 41.8 8.3 37 150-187 5-41 (273)
426 PRK09186 flagellin modificatio 94.1 0.14 3.1E-06 43.0 6.3 42 150-192 3-44 (256)
427 PRK07889 enoyl-(acyl carrier p 94.1 0.27 5.9E-06 41.6 8.0 35 150-185 6-42 (256)
428 PRK01438 murD UDP-N-acetylmura 94.1 0.34 7.3E-06 45.2 9.1 70 149-224 14-88 (480)
429 PLN02781 Probable caffeoyl-CoA 94.1 0.54 1.2E-05 39.4 9.5 94 145-240 63-176 (234)
430 PRK14192 bifunctional 5,10-met 94.0 0.88 1.9E-05 39.3 10.8 77 148-244 156-233 (283)
431 PRK08125 bifunctional UDP-gluc 94.0 0.17 3.7E-06 49.2 7.2 78 146-223 310-391 (660)
432 KOG1252 Cystathionine beta-syn 94.0 0.28 6.1E-06 42.8 7.6 58 144-202 96-156 (362)
433 PRK07577 short chain dehydroge 93.9 0.23 5E-06 41.1 7.1 38 150-188 2-39 (234)
434 PRK06522 2-dehydropantoate 2-r 93.9 0.66 1.4E-05 40.3 10.2 86 153-241 2-99 (304)
435 TIGR02622 CDP_4_6_dhtase CDP-g 93.9 0.17 3.6E-06 45.0 6.5 38 150-188 3-40 (349)
436 PRK01581 speE spermidine synth 93.9 0.88 1.9E-05 40.7 10.7 93 149-243 149-269 (374)
437 PRK07201 short chain dehydroge 93.8 0.27 5.8E-06 47.7 8.3 41 151-192 371-411 (657)
438 PRK14904 16S rRNA methyltransf 93.8 1.4 3.1E-05 40.7 12.6 96 144-242 244-377 (445)
439 COG0031 CysK Cysteine synthase 93.8 0.38 8.3E-06 41.7 8.1 57 144-202 55-114 (300)
440 TIGR03466 HpnA hopanoid-associ 93.8 0.082 1.8E-06 46.2 4.3 70 153-223 2-73 (328)
441 PF02254 TrkA_N: TrkA-N domain 93.8 1.1 2.3E-05 32.8 9.7 85 154-241 1-95 (116)
442 COG1090 Predicted nucleoside-d 93.8 0.15 3.3E-06 43.4 5.4 64 154-223 1-65 (297)
443 PF00044 Gp_dh_N: Glyceraldehy 93.8 0.38 8.3E-06 37.4 7.4 105 153-258 2-136 (151)
444 PRK09135 pteridine reductase; 93.7 0.4 8.7E-06 39.9 8.2 36 150-186 5-40 (249)
445 PLN00016 RNA-binding protein; 93.7 0.38 8.2E-06 43.3 8.5 92 150-243 51-165 (378)
446 PLN02662 cinnamyl-alcohol dehy 93.7 0.25 5.5E-06 43.1 7.2 73 150-223 3-85 (322)
447 PRK08936 glucose-1-dehydrogena 93.7 0.43 9.4E-06 40.3 8.4 36 149-185 5-40 (261)
448 PRK06701 short chain dehydroge 93.6 0.44 9.6E-06 41.2 8.5 39 147-186 42-80 (290)
449 PRK13581 D-3-phosphoglycerate 93.6 0.56 1.2E-05 44.3 9.7 84 150-242 139-230 (526)
450 PRK14982 acyl-ACP reductase; P 93.6 0.29 6.2E-06 43.4 7.2 91 149-244 153-248 (340)
451 PRK00121 trmB tRNA (guanine-N( 93.6 0.64 1.4E-05 38.0 8.9 91 150-242 40-156 (202)
452 PRK15068 tRNA mo(5)U34 methylt 93.6 1 2.2E-05 39.7 10.8 93 145-241 117-225 (322)
453 PLN02366 spermidine synthase 93.6 0.46 1E-05 41.6 8.4 93 148-243 89-207 (308)
454 PLN02166 dTDP-glucose 4,6-dehy 93.5 0.38 8.2E-06 44.3 8.3 72 149-223 118-193 (436)
455 PRK14901 16S rRNA methyltransf 93.5 1.4 3E-05 40.6 12.0 95 145-241 247-383 (434)
456 PRK12938 acetyacetyl-CoA reduc 93.5 0.31 6.7E-06 40.7 7.1 34 150-184 2-35 (246)
457 PRK14903 16S rRNA methyltransf 93.5 1.1 2.5E-05 41.1 11.3 96 145-242 232-366 (431)
458 PRK05557 fabG 3-ketoacyl-(acyl 93.5 0.53 1.1E-05 39.1 8.5 37 150-187 4-40 (248)
459 TIGR00446 nop2p NOL1/NOP2/sun 93.5 1.6 3.4E-05 37.4 11.5 95 145-241 66-198 (264)
460 PLN02206 UDP-glucuronate decar 93.5 0.31 6.7E-06 45.0 7.6 72 149-223 117-192 (442)
461 PRK15451 tRNA cmo(5)U34 methyl 93.4 0.39 8.4E-06 40.6 7.7 94 148-243 54-165 (247)
462 PRK04457 spermidine synthase; 93.4 0.82 1.8E-05 39.1 9.7 90 149-240 65-175 (262)
463 PRK12548 shikimate 5-dehydroge 93.4 0.31 6.6E-06 42.3 7.1 93 149-243 124-237 (289)
464 PRK09134 short chain dehydroge 93.4 0.56 1.2E-05 39.5 8.7 35 150-185 8-42 (258)
465 PRK14106 murD UDP-N-acetylmura 93.4 0.52 1.1E-05 43.5 9.1 70 150-224 4-78 (450)
466 PRK14176 bifunctional 5,10-met 93.4 0.7 1.5E-05 39.9 9.1 94 131-244 143-238 (287)
467 PRK14189 bifunctional 5,10-met 93.4 0.65 1.4E-05 40.0 8.9 95 131-245 137-233 (285)
468 PRK08220 2,3-dihydroxybenzoate 93.4 0.4 8.7E-06 40.2 7.7 36 150-186 7-42 (252)
469 TIGR01327 PGDH D-3-phosphoglyc 93.4 0.65 1.4E-05 43.9 9.7 85 150-242 137-229 (525)
470 PRK07666 fabG 3-ketoacyl-(acyl 93.3 0.26 5.6E-06 41.0 6.4 42 150-192 6-47 (239)
471 PRK06436 glycerate dehydrogena 93.3 0.81 1.8E-05 40.0 9.6 82 149-242 120-209 (303)
472 PRK06141 ornithine cyclodeamin 93.3 1 2.2E-05 39.6 10.3 94 146-243 120-220 (314)
473 TIGR01963 PHB_DH 3-hydroxybuty 93.3 0.22 4.7E-06 41.8 6.0 42 151-193 1-42 (255)
474 PLN02695 GDP-D-mannose-3',5'-e 93.3 0.16 3.6E-06 45.6 5.5 74 149-223 19-94 (370)
475 COG2521 Predicted archaeal met 93.3 0.31 6.7E-06 40.5 6.4 103 139-244 123-247 (287)
476 PRK08655 prephenate dehydrogen 93.3 0.53 1.1E-05 43.4 8.8 44 153-197 2-46 (437)
477 PLN02214 cinnamoyl-CoA reducta 93.3 0.3 6.4E-06 43.4 7.0 74 149-223 8-90 (342)
478 PRK10792 bifunctional 5,10-met 93.2 0.79 1.7E-05 39.5 9.1 94 131-244 138-233 (285)
479 PRK08642 fabG 3-ketoacyl-(acyl 93.2 0.46 1E-05 39.7 7.8 42 150-192 4-46 (253)
480 PRK07792 fabG 3-ketoacyl-(acyl 93.2 0.57 1.2E-05 40.9 8.6 35 150-185 11-45 (306)
481 TIGR00537 hemK_rel_arch HemK-r 93.2 1.7 3.8E-05 34.5 10.7 90 147-242 16-140 (179)
482 PRK07417 arogenate dehydrogena 93.1 0.64 1.4E-05 40.1 8.7 65 153-223 2-66 (279)
483 KOG0069 Glyoxylate/hydroxypyru 93.1 0.83 1.8E-05 40.3 9.2 86 149-242 160-253 (336)
484 TIGR00563 rsmB ribosomal RNA s 93.1 1.6 3.5E-05 40.1 11.7 97 144-242 232-368 (426)
485 PLN00198 anthocyanidin reducta 93.1 0.46 9.9E-06 42.0 7.9 74 149-223 7-89 (338)
486 PRK11088 rrmA 23S rRNA methylt 93.1 1.1 2.3E-05 38.5 10.0 92 149-242 84-181 (272)
487 TIGR01829 AcAcCoA_reduct aceto 93.1 0.62 1.4E-05 38.6 8.4 37 152-189 1-38 (242)
488 PLN02686 cinnamoyl-CoA reducta 93.1 0.38 8.2E-06 43.2 7.4 45 148-193 50-94 (367)
489 KOG1270 Methyltransferases [Co 93.1 0.39 8.5E-06 40.6 6.8 89 151-243 90-196 (282)
490 PRK00536 speE spermidine synth 93.1 0.55 1.2E-05 40.0 7.9 92 149-244 71-173 (262)
491 PRK05708 2-dehydropantoate 2-r 93.0 1.1 2.5E-05 39.1 10.2 87 152-241 3-103 (305)
492 PRK12749 quinate/shikimate deh 93.0 0.79 1.7E-05 39.7 9.0 73 150-223 123-205 (288)
493 COG0111 SerA Phosphoglycerate 93.0 0.73 1.6E-05 40.7 8.8 103 151-274 142-253 (324)
494 PRK07023 short chain dehydroge 92.9 0.28 6.1E-06 41.0 6.1 36 152-188 2-37 (243)
495 PRK03612 spermidine synthase; 92.9 0.46 1E-05 44.9 8.0 91 149-242 296-415 (521)
496 PRK10901 16S rRNA methyltransf 92.9 1.9 4.2E-05 39.6 11.9 98 143-242 237-372 (427)
497 PRK14188 bifunctional 5,10-met 92.9 1.4 3E-05 38.4 10.2 94 131-245 137-233 (296)
498 PRK12825 fabG 3-ketoacyl-(acyl 92.8 0.73 1.6E-05 38.2 8.5 37 150-187 5-41 (249)
499 KOG1540 Ubiquinone biosynthesi 92.8 1.7 3.8E-05 36.7 10.2 100 146-247 96-219 (296)
500 PRK08309 short chain dehydroge 92.8 4.2 9.1E-05 32.5 13.4 129 153-283 2-177 (177)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=6.3e-51 Score=349.92 Aligned_cols=275 Identities=35% Similarity=0.492 Sum_probs=240.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++.+++++ +++. +.+.|+|+++||+|+|+|+|+|++|+|.++|.++.. .+|.++|||.+|+|+++|++|+
T Consensus 4 mkA~~~~~~~~p---l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 4 MKAAVLKKFGQP---LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred eEEEEEccCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCc
Confidence 899999999998 8999 899999999999999999999999999999998644 3899999999999999999999
Q ss_pred CCCCCCEEEE-ec------------------CccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYG-DI------------------NEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~-~~------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
.|++||||.. +. .+....+...+|+|+||+++|+.+++++|++++++++|.+.|++.|+|+
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~ 157 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence 9999999966 21 1112244567899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc-ccccCCCcccEEEe
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIEDLPEKFDVVFD 220 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~d~vid 220 (284)
+++..+++||++|+|+| .|++|++++|+|+++ +++|++++++++|++.++++|++++++.++. ..+...+.+|++||
T Consensus 158 alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 158 ALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID 235 (339)
T ss_pred ehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence 99999999999999999 789999999999997 8999999999999999999999999997633 33334445999999
Q ss_pred CCCC--cHHHHHhhccCCEEEEEcCCC-CC-Cce------------eEEEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TP-PAS------------SFVLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~-~~~------------~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++. ++.+++.|+++|+++++|.+. .+ ..+ .-+....+.++++++++.++|+++|.|.+++||
T Consensus 236 tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l 314 (339)
T COG1064 236 TVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILETIPL 314 (339)
T ss_pred CCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEeeECH
Confidence 9994 489999999999999999884 22 111 112334689999999999999999999767664
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=7.6e-46 Score=324.82 Aligned_cols=273 Identities=44% Similarity=0.614 Sum_probs=236.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.+ ..++++ +.|.|+|++|||+|||.++++|+.|...++|.. ....++|+++|.|++|+|+++|++++
T Consensus 1 mka~~~~~~g~~-~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~-~~~~~~P~i~G~d~aG~V~avG~~V~ 77 (326)
T COG0604 1 MKAVVVEEFGGP-EVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAGVVVAVGSGVT 77 (326)
T ss_pred CeEEEEeccCCC-ceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC-CCCCCCCCcccceeEEEEEEeCCCCC
Confidence 999999999998 558999 899999999999999999999999999999862 22346899999999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga 159 (284)
.|++||||+.... ...+|+|+||.++|++.++++|++++++++|+++++++|||+++. ..++++|++|||+||
T Consensus 78 ~~~~GdrV~~~~~------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ga 151 (326)
T COG0604 78 GFKVGDRVAALGG------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGA 151 (326)
T ss_pred CcCCCCEEEEccC------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 9999999999741 004799999999999999999999999999999999999999994 688999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|++|.+++|+|+++ |+++++++.++++.++++++|+++++++.++++.+. ++++|+|||++|. +..++.+
T Consensus 152 aGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~ 230 (326)
T COG0604 152 AGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230 (326)
T ss_pred CchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence 999999999999996 778888888888888999999999999887665543 3479999999996 5789999
Q ss_pred hccCCEEEEEcCCCC-CC-cee----------E---EEecc-----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVT-PP-ASS----------F---VLTSD-----GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~-~~-~~~----------~---~~~~~-----~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
|+++|+++.+|..+. +. .++ . ..... .+.++++.+++++|.+++.|+++|||
T Consensus 231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l 302 (326)
T COG0604 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPL 302 (326)
T ss_pred hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEech
Confidence 999999999987652 11 111 0 11122 57888999999999999999999997
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-44 Score=301.57 Aligned_cols=276 Identities=25% Similarity=0.347 Sum_probs=230.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCC-CCCCCCCCCcccccceeEEEEEeCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~ 78 (284)
|+|+++..+++. +++ +.|.|++ .|+||+|++.++|||+||+|++... ...+..+.|+++|||.+|+|+++|++
T Consensus 5 ~~A~vl~g~~di----~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 5 NLALVLRGKGDI----RIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cceeEEEccCce----eEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 789999999985 998 8898887 9999999999999999999998654 33334578999999999999999999
Q ss_pred CCCCCCCCEEEEecCc-----------ccc--------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHH
Q 023273 79 VKKFKVGDEVYGDINE-----------KAL--------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA 139 (284)
Q Consensus 79 ~~~~~~Gd~V~~~~~~-----------~~~--------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta 139 (284)
|+++++||||+..++. .++ ..+..+|++++|++.+++.|+++|++++++++|++- +++++
T Consensus 80 Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~ 158 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVG 158 (354)
T ss_pred ccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhh
Confidence 9999999999776531 111 224467999999999999999999999999988873 36679
Q ss_pred HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-cccC-------
Q 023273 140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDL------- 211 (284)
Q Consensus 140 ~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~------- 211 (284)
+||.+++++++|++|||.| +|++|+.+...|++++..+|++++..++|++.++++|++.+.+..... .+.+
T Consensus 159 ~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~ 237 (354)
T KOG0024|consen 159 VHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKA 237 (354)
T ss_pred hhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhh
Confidence 9999999999999999999 899999999999998557899999999999999999999887765433 1111
Q ss_pred --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee------------EEEeccHHHHHHHHHHHHCCCe-
Q 023273 212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS------------FVLTSDGSILEKLNPYFESGKV- 273 (284)
Q Consensus 212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~i- 273 (284)
...+|+.|||+|. .+.++.+++.+|++++.+.-.....++ -.++....++..+++++++|++
T Consensus 238 ~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~ 317 (354)
T KOG0024|consen 238 LGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKID 317 (354)
T ss_pred ccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcC
Confidence 2359999999994 599999999999988887544322222 2344456799999999999986
Q ss_pred -eEeecccccC
Q 023273 274 -KAIIDPKGLL 283 (284)
Q Consensus 274 -~~~i~~~~~~ 283 (284)
+++|+++|+|
T Consensus 318 ~k~lIT~r~~~ 328 (354)
T KOG0024|consen 318 VKPLITHRYKF 328 (354)
T ss_pred chhheeccccc
Confidence 6789999985
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.1e-42 Score=293.44 Aligned_cols=275 Identities=27% Similarity=0.348 Sum_probs=233.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
+|++++.++++| ++++ +..+.+|++|||+||+.++|+|++|.+..+|..| ..+|.++|||++|+|++||++|+
T Consensus 3 ~~aAV~~~~~~P---l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt 75 (366)
T COG1062 3 TRAAVAREAGKP---LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT 75 (366)
T ss_pred ceEeeeecCCCC---eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence 579999999999 9999 8999999999999999999999999999999875 34899999999999999999999
Q ss_pred CCCCCCEEEEecC-cc-------------------------------cc-------CCCCCCCceeeEEeeecCceeeCC
Q 023273 81 KFKVGDEVYGDIN-EK-------------------------------AL-------DHPKRNGSLAEYTAVEENLLALKP 121 (284)
Q Consensus 81 ~~~~Gd~V~~~~~-~~-------------------------------~~-------~~~~~~g~~~~~~~~~~~~~~~ip 121 (284)
+++|||+|+..+. ++ +. +..-..++|++|.+++..++++++
T Consensus 76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~ 155 (366)
T COG1062 76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID 155 (366)
T ss_pred ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence 9999999976541 00 00 011122599999999999999999
Q ss_pred CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE
Q 023273 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200 (284)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~ 200 (284)
++.+++.++.+.|...|++.++ ..+++++|++|.|.| .|++|+++++-|+..+..++|+++.+++|+++++++|++++
T Consensus 156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~ 234 (366)
T COG1062 156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHF 234 (366)
T ss_pred CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCcee
Confidence 9999999999999999999987 789999999999999 99999999999999755689999999999999999999999
Q ss_pred eeCCCc-cccc----C-CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC-----CceeEEE---------ec-
Q 023273 201 IDYTKE-NIED----L-PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----PASSFVL---------TS- 256 (284)
Q Consensus 201 ~~~~~~-~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~---------~~- 256 (284)
+|..+. ++.+ + ..|+|.+|||+|+ .++++++..++|+.+++|.+... +.+.++. ++
T Consensus 235 vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~ 314 (366)
T COG1062 235 VNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGA 314 (366)
T ss_pred ecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCC
Confidence 998765 2322 2 4599999999997 58999999999999999987532 2222211 11
Q ss_pred -cHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273 257 -DGSILEKLNPYFESGKV--KAIIDPKGLL 283 (284)
Q Consensus 257 -~~~~~~~~~~~~~~g~i--~~~i~~~~~~ 283 (284)
-+.+++.+++++.+|+| +++|++++||
T Consensus 315 ~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L 344 (366)
T COG1062 315 RPRSDIPRLVDLYMAGKLPLDRLVTHTIPL 344 (366)
T ss_pred ccccchhHHHHHHHcCCCchhHHhhccccH
Confidence 25689999999999987 5579999986
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.9e-42 Score=285.91 Aligned_cols=270 Identities=27% Similarity=0.389 Sum_probs=218.9
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
+++.+..++.. ..+++. +++.|+|+++||+|+|+|+|||++|+|.+.|.++. .++|.++|||.+|+|+++|+++++
T Consensus 11 ~g~~~~~~~G~-l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~ 86 (360)
T KOG0023|consen 11 FGWAARDPSGV-LSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVKVGSNVTG 86 (360)
T ss_pred EEEEEECCCCC-CCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEEECCCccc
Confidence 46778877775 336778 78999999999999999999999999999999864 689999999999999999999999
Q ss_pred CCCCCEEEEe-----c--------------C-------ccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273 82 FKVGDEVYGD-----I--------------N-------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (284)
Q Consensus 82 ~~~Gd~V~~~-----~--------------~-------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (284)
|++||||-.= | + ....++....|+|++|+++++.++++||++++++.||.+.|+
T Consensus 87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa 166 (360)
T KOG0023|consen 87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA 166 (360)
T ss_pred ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence 9999998111 1 1 011122334566999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEeeCC-Ccc-cccC-
Q 023273 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYT-KEN-IEDL- 211 (284)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~-~~~-~~~~- 211 (284)
..|.|.++...++.||+++-|.|+ |++|.+++++|+++ |.+|+++++++ +|.+.++.+|++..++.. +.+ ....
T Consensus 167 GITvYspLk~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 167 GITVYSPLKRSGLGPGKWVGIVGL-GGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIM 244 (360)
T ss_pred ceEEeehhHHcCCCCCcEEEEecC-cccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence 999999999999999999999995 55999999999997 99999999987 566777889999988876 333 2222
Q ss_pred ---CCcccEEEeCCC-CcHHHHHhhccCCEEEEEcCCCCCCcee---E---------EEeccHHHHHHHHHHHHCCCeeE
Q 023273 212 ---PEKFDVVFDAVG-QCDKALKAVKEGGRVVSIIGSVTPPASS---F---------VLTSDGSILEKLNPYFESGKVKA 275 (284)
Q Consensus 212 ---~~~~d~vid~~g-~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~g~i~~ 275 (284)
..++|.+.+.+- .++.++++|+.+|++|++|.+..+..++ + +....+.+.++++++.++|.+++
T Consensus 245 ~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~ 324 (360)
T KOG0023|consen 245 KTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKS 324 (360)
T ss_pred HhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcC
Confidence 334555544422 3689999999999999999987543332 1 11236789999999999999888
Q ss_pred ee
Q 023273 276 II 277 (284)
Q Consensus 276 ~i 277 (284)
.|
T Consensus 325 ~I 326 (360)
T KOG0023|consen 325 PI 326 (360)
T ss_pred ce
Confidence 76
No 6
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.1e-42 Score=275.95 Aligned_cols=268 Identities=36% Similarity=0.461 Sum_probs=236.6
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|.+++.+.|.. +.++++ +.|.|+|.|+|++|+-.|+|+|..|..+++|.+. +.+.|.++|-|++|+|+++|+++++
T Consensus 10 k~i~v~e~Ggy-dvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 10 KCIVVTEFGGY-DVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred eEEEEeccCCc-ceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecCCccc
Confidence 67889999998 889999 8999999999999999999999999999999872 5678999999999999999999999
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~ 160 (284)
+++||||+-..+ .|.|+++..+|...+.++|+.+++..+|++.+.++|||.-+ +..++++|++||++.|+
T Consensus 86 rkvGDrVayl~~---------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA 156 (336)
T KOG1197|consen 86 RKVGDRVAYLNP---------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA 156 (336)
T ss_pred cccccEEEEecc---------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 999999987653 89999999999999999999999999999999999999988 56899999999999999
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHhh
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~l 232 (284)
|++|++++|+++.. +.++|.+.+..+|.+.+++.|+++.|+++.+++-+. ++|+|+++|.+|. +...+.+|
T Consensus 157 GGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L 235 (336)
T KOG1197|consen 157 GGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL 235 (336)
T ss_pred ccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence 99999999999995 999999999999999999999999999987775543 6799999999994 68999999
Q ss_pred ccCCEEEEEcCCCC---CC--------ceeEEE----e--ccH----HHHHHHHHHHHCCCeeEeecccccC
Q 023273 233 KEGGRVVSIIGSVT---PP--------ASSFVL----T--SDG----SILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 233 ~~~G~~v~~g~~~~---~~--------~~~~~~----~--~~~----~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++.|++|.+|..+. +. ++.++. + ..+ .-..+++.++-+|.|++.|+|+|||
T Consensus 236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl 307 (336)
T KOG1197|consen 236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL 307 (336)
T ss_pred ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence 99999999987652 11 111111 0 011 2356778888999999999999997
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.3e-39 Score=288.75 Aligned_cols=275 Identities=29% Similarity=0.393 Sum_probs=226.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++. ++++ +.+.|+|+++||+|++.++++|++|++.+.+.++. +..+|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 1 MRGAVFPGDRT----VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CeEEEEecCCc----eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCc
Confidence 99999997654 6998 88999999999999999999999999988775422 223578999999999999999999
Q ss_pred CCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
+|++||+|++.+.... ..+...+|+|++|+++|.+.++++|+++++++++++++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 9999999987642100 012234799999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCcc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF 215 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~ 215 (284)
++...++++|++|+|+| +|++|++++++|+.+ |++ |++++++++|.+.++++|++.+++++..+... . .+++
T Consensus 155 ~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~ 232 (339)
T cd08239 155 ALRRVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGA 232 (339)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence 99888899999999998 699999999999996 888 99999999999999999999888876543111 1 3479
Q ss_pred cEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-c---------eeE--EEeccHHHHHHHHHHHHCCCee--Eeec
Q 023273 216 DVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-A---------SSF--VLTSDGSILEKLNPYFESGKVK--AIID 278 (284)
Q Consensus 216 d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~---------~~~--~~~~~~~~~~~~~~~~~~g~i~--~~i~ 278 (284)
|++||++|+. ..++++|+++|+++.+|...... . ..+ ......++++++++++++|.++ +.|+
T Consensus 233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~ 312 (339)
T cd08239 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT 312 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence 9999999963 67899999999999998654211 0 111 1122457899999999999986 4799
Q ss_pred ccccC
Q 023273 279 PKGLL 283 (284)
Q Consensus 279 ~~~~~ 283 (284)
++|||
T Consensus 313 ~~~~l 317 (339)
T cd08239 313 HRFGL 317 (339)
T ss_pred EEecH
Confidence 99886
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.1e-39 Score=292.75 Aligned_cols=277 Identities=26% Similarity=0.331 Sum_probs=226.3
Q ss_pred CeEEEEcccCCC-----ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEe
Q 023273 1 MKAWVYKEYGNS-----QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75 (284)
Q Consensus 1 m~a~~~~~~g~~-----~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 75 (284)
|||+++.++|.+ .+.++++ +.+.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence 999999998853 2558998 8899999999999999999999999999988653 346889999999999999
Q ss_pred CCCCCCCCCCCEEEEecCc----cc---cC--------------C------------------CCCCCceeeEEeeecCc
Q 023273 76 GSQVKKFKVGDEVYGDINE----KA---LD--------------H------------------PKRNGSLAEYTAVEENL 116 (284)
Q Consensus 76 G~~~~~~~~Gd~V~~~~~~----~~---~~--------------~------------------~~~~g~~~~~~~~~~~~ 116 (284)
|++++++++||||++.+.. +. .. + ....|+|++|+++|.+.
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 9999999999999874210 00 00 0 00137999999999999
Q ss_pred eeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH
Q 023273 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS 194 (284)
Q Consensus 117 ~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~ 194 (284)
++++|+++++++++++++++.|||+++ ...++++|++|+|.| +|++|++++++|+.+ |+ +|++++.+++|++.+++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARE 234 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999987 568899999999998 699999999999996 87 68999999999999999
Q ss_pred cCCcEEeeCCCccccc----C-CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce------------eE--
Q 023273 195 LGADLAIDYTKENIED----L-PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS------------SF-- 252 (284)
Q Consensus 195 ~g~~~~~~~~~~~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~------------~~-- 252 (284)
+|+++++++..+++.+ . .+++|++|||+|+ ...++++++++|+++.+|.......+ .+
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 9999998876544222 1 3479999999985 47889999999999999875321111 11
Q ss_pred EEec---cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 253 VLTS---DGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 253 ~~~~---~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.... ..++++++++++++|++++ +|+++|||
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l 350 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL 350 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH
Confidence 1111 2468899999999999965 68999986
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.7e-39 Score=288.80 Aligned_cols=274 Identities=23% Similarity=0.278 Sum_probs=225.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++.+++.+ ++++ +.|.|+|+++||+|||.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 2 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 74 (358)
T TIGR03451 2 VRGVIARSKGAP---VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT 74 (358)
T ss_pred cEEEEEccCCCC---CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence 999999999987 7888 8999999999999999999999999999988653 24688999999999999999999
Q ss_pred CCCCCCEEEEecCc----c---c----cC---------------CC-----CCCCceeeEEeeecCceeeCCCCCCHHhh
Q 023273 81 KFKVGDEVYGDINE----K---A----LD---------------HP-----KRNGSLAEYTAVEENLLALKPKNLSFVEA 129 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~---~----~~---------------~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~a 129 (284)
+|++||+|++.+.. + . .. +. ...|+|++|+.+|.+.++++|++++++++
T Consensus 75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a 154 (358)
T TIGR03451 75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA 154 (358)
T ss_pred ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence 99999999874210 0 0 00 00 12589999999999999999999999999
Q ss_pred hcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273 130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (284)
Q Consensus 130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (284)
+++++.+.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |++ |++++++++|.+.++++|++++++++..+
T Consensus 155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 232 (358)
T TIGR03451 155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence 99998888999886 567899999999998 699999999999996 874 88899999999999999999888876544
Q ss_pred ccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--Eec---cHHHH
Q 023273 208 IED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTS---DGSIL 261 (284)
Q Consensus 208 ~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~---~~~~~ 261 (284)
+.+ . +.++|++|||+|+ ...++++++++|+++.+|.+.... ...+. +.. ..+++
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 312 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence 322 1 3479999999995 478899999999999998754211 11111 111 25689
Q ss_pred HHHHHHHHCCCeeE--eecccccC
Q 023273 262 EKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 262 ~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
+++++++++|++++ .|+++|||
T Consensus 313 ~~~~~l~~~g~l~~~~~i~~~~~l 336 (358)
T TIGR03451 313 PMLVDLYLQGRLPLDAFVTERIGL 336 (358)
T ss_pred HHHHHHHHcCCCCchheEEEEecH
Confidence 99999999999965 68999986
No 10
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-40 Score=274.33 Aligned_cols=276 Identities=25% Similarity=0.313 Sum_probs=232.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||++.+++++| |.++ +...++|+.+||+|++.++++|++|.+.+.|..+ ...+|+++|||++|+|+.+|++|.
T Consensus 8 CKAAV~w~a~~P---L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~--~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 8 CKAAVAWEAGKP---LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP--EGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred EeEeeeccCCCC---eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCCc--cccCceEecccceeEEEEecCCcc
Confidence 689999999999 9999 8999999999999999999999999999999753 446899999999999999999999
Q ss_pred CCCCCCEEEEecC----------------------------------------ccccCCCCCCCceeeEEeeecCceeeC
Q 023273 81 KFKVGDEVYGDIN----------------------------------------EKALDHPKRNGSLAEYTAVEENLLALK 120 (284)
Q Consensus 81 ~~~~Gd~V~~~~~----------------------------------------~~~~~~~~~~g~~~~~~~~~~~~~~~i 120 (284)
++++||+|+.... +...+++....+|+||.+++...+++|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 9999999976531 000112223359999999999999999
Q ss_pred CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE
Q 023273 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL 199 (284)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~ 199 (284)
++..+++.++.+.|...|+|.|. ..++++||+++.|.| .|++|+++++-|++.++.++|.++.+++|++.++++|+++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999987 689999999999999 9999999999999975679999999999999999999999
Q ss_pred EeeCCCcc--ccc-----CCCcccEEEeCCCCc---HHHHHhhccC-CEEEEEcCCCCCCceeE--------------EE
Q 023273 200 AIDYTKEN--IED-----LPEKFDVVFDAVGQC---DKALKAVKEG-GRVVSIIGSVTPPASSF--------------VL 254 (284)
Q Consensus 200 ~~~~~~~~--~~~-----~~~~~d~vid~~g~~---~~~~~~l~~~-G~~v~~g~~~~~~~~~~--------------~~ 254 (284)
++|..+.. ..+ ...|+|+-|||.|+. ++++.+...+ |+-|.+|.......+.+ .+
T Consensus 241 ~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F 320 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF 320 (375)
T ss_pred ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence 99987211 111 267999999999974 6677777777 99999998764433321 11
Q ss_pred e--ccHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273 255 T--SDGSILEKLNPYFESGKV--KAIIDPKGLL 283 (284)
Q Consensus 255 ~--~~~~~~~~~~~~~~~g~i--~~~i~~~~~~ 283 (284)
+ -..++++.+++.+.++++ +..|+|++||
T Consensus 321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f 353 (375)
T KOG0022|consen 321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF 353 (375)
T ss_pred ccccchhhhhHHHHHHHhCccchhhhhhcccCH
Confidence 1 146899999999999975 6679999997
No 11
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-39 Score=287.49 Aligned_cols=272 Identities=18% Similarity=0.284 Sum_probs=216.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc-CCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++.++++ ++++ +.+.| ++++||+|||.++|||++|++.+. |..+....++|.++|||++|+|+++ ++
T Consensus 5 ~~~~~~~~~~~----~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 5 TQSCVVAGKKD----VAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred ceEEEEecCCc----eEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 68999998877 4888 78876 689999999999999999999875 4432223457899999999999999 77
Q ss_pred CCCCCCCEEEEecCccc------------------cCC-----CCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchH
Q 023273 80 KKFKVGDEVYGDINEKA------------------LDH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 136 (284)
++|++||||+..+.... ..+ ...+|+|+||++++.+.++++|+++++++++ +..++
T Consensus 77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~ 155 (343)
T PRK09880 77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL 155 (343)
T ss_pred ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence 89999999986531100 001 1246999999999999999999999987554 45567
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC---C
Q 023273 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---P 212 (284)
Q Consensus 137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~ 212 (284)
.+||+++......+|++|+|.| +|++|++++++|+.+ |+ +|++++++++|++.++++|++.+++++.+++.+. .
T Consensus 156 ~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~ 233 (343)
T PRK09880 156 AVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK 233 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC
Confidence 7899999777777899999998 699999999999996 77 6888999999999999999999998765443332 3
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------EEE-eccHHHHHHHHHHHHCCCeeE--e
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------FVL-TSDGSILEKLNPYFESGKVKA--I 276 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~g~i~~--~ 276 (284)
+++|++||++|+ ...++++|+++|+++.+|.+.....++ +.. ....++++++++++++|++++ .
T Consensus 234 g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~ 313 (343)
T PRK09880 234 GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPL 313 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhh
Confidence 369999999996 378999999999999998754322221 110 113467999999999999975 7
Q ss_pred ecccccC
Q 023273 277 IDPKGLL 283 (284)
Q Consensus 277 i~~~~~~ 283 (284)
|+++|||
T Consensus 314 i~~~~~l 320 (343)
T PRK09880 314 LSAEYPF 320 (343)
T ss_pred eEEEEEH
Confidence 8999986
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.2e-38 Score=285.59 Aligned_cols=275 Identities=26% Similarity=0.338 Sum_probs=224.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.. ++++ +.|.|+|+++||+|+|.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 2 ~~a~~~~~~~~~---l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~--~~~p~i~GhE~~G~V~~vG~~v~ 75 (368)
T TIGR02818 2 SRAAVAWAAGQP---LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE--GVFPVILGHEGAGIVEAVGEGVT 75 (368)
T ss_pred ceEEEEecCCCC---eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC--CCCCeeeccccEEEEEEECCCCc
Confidence 899999988866 7888 88999999999999999999999999999887542 35689999999999999999999
Q ss_pred CCCCCCEEEEecCc----cc---cC--------------------------------CCCCCCceeeEEeeecCceeeCC
Q 023273 81 KFKVGDEVYGDINE----KA---LD--------------------------------HPKRNGSLAEYTAVEENLLALKP 121 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~~---~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip 121 (284)
+|++||||++.+.. +. .. +....|+|++|+++|.+.++++|
T Consensus 76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP 155 (368)
T TIGR02818 76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN 155 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence 99999999875311 00 00 00014799999999999999999
Q ss_pred CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (284)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (284)
+++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++.+++|++.++++|++.
T Consensus 156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~ 233 (368)
T TIGR02818 156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATD 233 (368)
T ss_pred CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCe
Confidence 9999999999999999999998 578899999999998 699999999999996 87 7999999999999999999998
Q ss_pred EeeCCC--ccccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC--CCc---eeE--------E-E
Q 023273 200 AIDYTK--ENIED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT--PPA---SSF--------V-L 254 (284)
Q Consensus 200 ~~~~~~--~~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~--~~~---~~~--------~-~ 254 (284)
++++.+ .++.+ . .+++|++||++|+ ...++++++++ |+++.+|.+.. +.. +.+ . .
T Consensus 234 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 313 (368)
T TIGR02818 234 CVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAF 313 (368)
T ss_pred EEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeec
Confidence 888653 11111 1 3489999999995 47889999886 99999986531 111 110 0 0
Q ss_pred e--ccHHHHHHHHHHHHCCCee--EeecccccC
Q 023273 255 T--SDGSILEKLNPYFESGKVK--AIIDPKGLL 283 (284)
Q Consensus 255 ~--~~~~~~~~~~~~~~~g~i~--~~i~~~~~~ 283 (284)
. ....++.++++++++|+++ ++|+++|||
T Consensus 314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l 346 (368)
T TIGR02818 314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL 346 (368)
T ss_pred cCCCcHHHHHHHHHHHHCCCCCchhheeEEecH
Confidence 1 1246799999999999985 579999986
No 13
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.5e-38 Score=286.26 Aligned_cols=276 Identities=23% Similarity=0.300 Sum_probs=224.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++.++++. ++++ +.+.|+|+++||+|+|.++|+|++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus 11 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 11 CKAAVAWGPGEP---LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred eEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEEeCCCCC
Confidence 899999988865 6888 88999999999999999999999999999887532 235688999999999999999999
Q ss_pred CCCCCCEEEEecCccc---------------cC------------C---------------CCCCCceeeEEeeecCcee
Q 023273 81 KFKVGDEVYGDINEKA---------------LD------------H---------------PKRNGSLAEYTAVEENLLA 118 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~---------------~~------------~---------------~~~~g~~~~~~~~~~~~~~ 118 (284)
+|++||||++.+.... .. + ...+|+|++|+++|.+.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 9999999987542100 00 0 0025899999999999999
Q ss_pred eCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcC
Q 023273 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLG 196 (284)
Q Consensus 119 ~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g 196 (284)
++|++++.++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcC
Confidence 9999999999999999999999987 568899999999999 699999999999996 87 6999999999999999999
Q ss_pred CcEEeeCCCcc--ccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCc-----------eeEE-
Q 023273 197 ADLAIDYTKEN--IED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPA-----------SSFV- 253 (284)
Q Consensus 197 ~~~~~~~~~~~--~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~-----------~~~~- 253 (284)
++.+++.+..+ +.+ . .+++|++||++|+ ...++.+++++ |+++.+|.+..+.. .++.
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g 323 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG 323 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEE
Confidence 98888865421 221 1 2379999999996 47888999996 99999987643211 1111
Q ss_pred -Ee-c--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 254 -LT-S--DGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 254 -~~-~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.. . ...++.++++++.+|.+++ .|+++|||
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l 359 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF 359 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence 11 1 1467899999999998854 69999986
No 14
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=5.4e-38 Score=277.20 Aligned_cols=271 Identities=24% Similarity=0.265 Sum_probs=220.9
Q ss_pred EEEEcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 3 AWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 3 a~~~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|+.+..+|.+. ..++++ +.|.|+|+++||+||+.++++|++|.+.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~ 77 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG 77 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence 35667777542 348898 89999999999999999999999999999887642 234689999999999999999999
Q ss_pred CCCCCEEEEec-----Ccc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 82 FKVGDEVYGDI-----NEK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 82 ~~~Gd~V~~~~-----~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
|++||+|+..+ ..+ ...+...+|+|++|+.+|.+.++++|+++++++++.+++++.|||++
T Consensus 78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 157 (329)
T TIGR02822 78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA 157 (329)
T ss_pred cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence 99999997532 110 01122346999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
+...++++|++|+|+| +|++|++++++|+.+ |+++++++++++|.+.++++|+++++++.... .+++|+++++.
T Consensus 158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~ 231 (329)
T TIGR02822 158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA 231 (329)
T ss_pred HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence 9878899999999999 599999999999996 88999999999999999999999988754221 34789999887
Q ss_pred CC---cHHHHHhhccCCEEEEEcCCC-CCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 223 GQ---CDKALKAVKEGGRVVSIIGSV-TPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 223 g~---~~~~~~~l~~~G~~v~~g~~~-~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+. ...++++|+++|+++.+|... ....+ .+ .....++++.++++++++|++++ |+++|||
T Consensus 232 ~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~-i~~~~~l 307 (329)
T TIGR02822 232 PAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRV-TTHTYPL 307 (329)
T ss_pred CcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCee-EEEEEeH
Confidence 64 488999999999999998742 11111 11 12234678899999999999985 6788986
No 15
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.4e-38 Score=280.43 Aligned_cols=276 Identities=22% Similarity=0.303 Sum_probs=216.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||+..+...+.. ..+++. +.+.|+|+++||+|||.++++|++|++.+.|.++ ...+|.++|||++|+|+++|++++
T Consensus 11 ~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 11 QKAFGWAARDPS-GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG--FTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hheeEEEecCCC-CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC--CCCCCccCCcceeEEEEEECCCCC
Confidence 565555555543 447887 7888999999999999999999999999988653 235688999999999999999999
Q ss_pred CCCCCCEEEEe-----cCcccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273 81 KFKVGDEVYGD-----INEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (284)
Q Consensus 81 ~~~~Gd~V~~~-----~~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 134 (284)
+|++||+|+.. |+.+.. .+...+|+|++|+++|.+.++++|+++++++++++++
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~ 166 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC 166 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence 99999999742 211100 0122369999999999999999999999999999999
Q ss_pred hHHHHHHHHH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHHcCCcEEeeCCCc-ccccC
Q 023273 135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKE-NIEDL 211 (284)
Q Consensus 135 ~~~ta~~al~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~ 211 (284)
.+.|+|+++. ....++|++|+|.| +|++|++++++|+.+ |+++++++.++++ .+.++++|++.++++... .+...
T Consensus 167 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 244 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA 244 (360)
T ss_pred chHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence 9999999985 45678999999988 799999999999996 8898888776665 455678999888876432 23333
Q ss_pred CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI 276 (284)
Q Consensus 212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~ 276 (284)
.+++|++||++|+ ...++++++++|+++.+|....+..++ + ......++++++++++++|+|++.
T Consensus 245 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~ 324 (360)
T PLN02586 245 IGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD 324 (360)
T ss_pred cCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc
Confidence 3479999999996 367999999999999998653221111 1 111235789999999999999988
Q ss_pred ecccccC
Q 023273 277 IDPKGLL 283 (284)
Q Consensus 277 i~~~~~~ 283 (284)
+ ++|||
T Consensus 325 ~-~~~~l 330 (360)
T PLN02586 325 I-ELIRM 330 (360)
T ss_pred E-EEEeH
Confidence 8 47875
No 16
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3.9e-38 Score=275.74 Aligned_cols=265 Identities=17% Similarity=0.227 Sum_probs=205.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecC-HHHHHHHcCCCCCCC-CCCCcccccceeEEEEEeCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-PIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~-~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~ 78 (284)
||++++.+++. ++++ +.+.|+|++|||+|||.+++|| ++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~ka~~~~~~~~----l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 2 TQAIVLSGPNQ----IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred ceEEEEeCCCe----EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 78999987664 6898 8899999999999999999996 799999888764332 357899999999999999999
Q ss_pred CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEc
Q 023273 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158 (284)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g 158 (284)
+ +|++||||+..+..+........|+|++|+++|.+.++++|++++++. +++. ...|||+++.... .++++++|+|
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G 152 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG 152 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence 8 699999998743222111112369999999999999999999998754 4443 4679999996543 4688999998
Q ss_pred CCchHHHHHHHHHHHhcCCeE-EEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cHHHHHhhcc
Q 023273 159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKE 234 (284)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~v-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~ 234 (284)
+|++|++++|+|+.+ |+++ ++++.+++|++.+... .++|+... ...++|++|||+|+ .+.++++|++
T Consensus 153 -~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~ 223 (308)
T TIGR01202 153 -HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAK 223 (308)
T ss_pred -CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhc
Confidence 799999999999996 8874 4556677777666543 34554321 24689999999996 3789999999
Q ss_pred CCEEEEEcCCCCCCcee----------EE--EeccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 235 GGRVVSIIGSVTPPASS----------FV--LTSDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 235 ~G~~v~~g~~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
+|+++++|.+..+..++ +. .....++++++++++++|++++ .|+++|||
T Consensus 224 ~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l 286 (308)
T TIGR01202 224 GGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPA 286 (308)
T ss_pred CcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecH
Confidence 99999998764332221 11 1124678999999999999876 69999986
No 17
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-37 Score=279.32 Aligned_cols=275 Identities=28% Similarity=0.342 Sum_probs=224.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.. ++++ +.|.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~ 76 (368)
T cd08300 3 CKAAVAWEAGKP---LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT 76 (368)
T ss_pred ceEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence 899999888765 7898 88999999999999999999999999999887642 25688999999999999999999
Q ss_pred CCCCCCEEEEecCc----c---ccC--------------------------------CCCCCCceeeEEeeecCceeeCC
Q 023273 81 KFKVGDEVYGDINE----K---ALD--------------------------------HPKRNGSLAEYTAVEENLLALKP 121 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~---~~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip 121 (284)
+|++||+|++.+.. + ... +....|+|++|+.++.+.++++|
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 156 (368)
T cd08300 77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN 156 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence 99999999875210 0 000 00124799999999999999999
Q ss_pred CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (284)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (284)
+++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ ++++++++++|.+.++++|+++
T Consensus 157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~ 234 (368)
T cd08300 157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD 234 (368)
T ss_pred CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence 9999999999999999999987 568899999999998 699999999999996 88 6999999999999999999999
Q ss_pred EeeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC--CC---cee---------EEE
Q 023273 200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT--PP---ASS---------FVL 254 (284)
Q Consensus 200 ~~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~--~~---~~~---------~~~ 254 (284)
++++.+. ++.+ ..+++|++||++|+ ...++++++++ |+++.+|.... .. .+. +..
T Consensus 235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (368)
T cd08300 235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAF 314 (368)
T ss_pred EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEe
Confidence 9987643 2221 13489999999995 47889999886 99999986531 11 000 011
Q ss_pred e--ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 255 T--SDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 255 ~--~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
. ...+++.++++++++|++++ .|+++|||
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l 347 (368)
T cd08300 315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL 347 (368)
T ss_pred cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH
Confidence 1 13578899999999999875 59999986
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.1e-37 Score=279.55 Aligned_cols=275 Identities=21% Similarity=0.260 Sum_probs=223.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++.+++.+ ++++ +.+.|+|+++||+|++.++++|++|++.++|..+ ...+|.++|||++|+|+++|++++
T Consensus 3 ~ka~~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 76 (369)
T cd08301 3 CKAAVAWEAGKP---LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT 76 (369)
T ss_pred cEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence 899999988776 7998 8899999999999999999999999999988653 235688999999999999999999
Q ss_pred CCCCCCEEEEecCcc-------ccC---------------------------------CCCCCCceeeEEeeecCceeeC
Q 023273 81 KFKVGDEVYGDINEK-------ALD---------------------------------HPKRNGSLAEYTAVEENLLALK 120 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~-------~~~---------------------------------~~~~~g~~~~~~~~~~~~~~~i 120 (284)
+|++||||++.+... ..+ +....|+|++|+.++...++++
T Consensus 77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 156 (369)
T cd08301 77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI 156 (369)
T ss_pred ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence 999999998753110 000 0002488999999999999999
Q ss_pred CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (284)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (284)
|+++++++++++++++.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++.+.++++|++
T Consensus 157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~ 234 (369)
T cd08301 157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVT 234 (369)
T ss_pred CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 568899999999998 699999999999996 87 799999999999999999998
Q ss_pred EEeeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCce-----------eEEE--
Q 023273 199 LAIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVL-- 254 (284)
Q Consensus 199 ~~~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~-- 254 (284)
.++++... .+.+ ..+++|++||++|. ...++++++++ |+++.+|....+..+ .+..
T Consensus 235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 314 (369)
T cd08301 235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL 314 (369)
T ss_pred eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence 88876541 2211 13479999999985 47789999996 999999875422111 1111
Q ss_pred -ec--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 255 -TS--DGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 255 -~~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.. ...+++++++++++|+++. +|+++|||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l 348 (369)
T cd08301 315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPF 348 (369)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH
Confidence 11 2457899999999998754 68999986
No 19
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.4e-37 Score=279.42 Aligned_cols=272 Identities=24% Similarity=0.286 Sum_probs=220.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++.++++. ++++ +.+.|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|++++
T Consensus 13 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 13 CRAAVAWGAGEA---LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred eEEEEEecCCCC---ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCc
Confidence 899999887755 7888 889999999999999999999999999887642 3578999999999999999999
Q ss_pred CCCCCCEEEEecCccc---------------cC-------------------C-----CCCCCceeeEEeeecCceeeCC
Q 023273 81 KFKVGDEVYGDINEKA---------------LD-------------------H-----PKRNGSLAEYTAVEENLLALKP 121 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~---------------~~-------------------~-----~~~~g~~~~~~~~~~~~~~~ip 121 (284)
+|++||+|++...... .. + ....|+|++|+.+|.+.++++|
T Consensus 84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP 163 (378)
T PLN02827 84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD 163 (378)
T ss_pred ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence 9999999988642100 00 0 0024899999999999999999
Q ss_pred CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcE
Q 023273 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADL 199 (284)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~ 199 (284)
+++++++++++.+++.++|+++ +..++++|++|+|+| +|++|++++++|+.+ |++ +++++.+++|.+.++++|+++
T Consensus 164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence 9999999998888888999876 567899999999998 699999999999996 874 777777999999999999998
Q ss_pred EeeCCCc--cccc----C-CCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCCCCcee-----------EE--Ee
Q 023273 200 AIDYTKE--NIED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASS-----------FV--LT 255 (284)
Q Consensus 200 ~~~~~~~--~~~~----~-~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~-----------~~--~~ 255 (284)
+++++.. ++.+ . .+++|++||++|. ...++++++++ |+++.+|.+..+..+. +. ..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 8887542 2222 1 3489999999995 47899999998 9999998764221111 11 11
Q ss_pred -c--cHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 256 -S--DGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 256 -~--~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
. ...++.++++++++|+|++ .|+++|||
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l 354 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF 354 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecH
Confidence 1 2457899999999999998 79999986
No 20
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=7.5e-38 Score=277.68 Aligned_cols=267 Identities=19% Similarity=0.181 Sum_probs=207.2
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC--CCCCCcccccceeEEEEEeCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--DSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
+++++.++++ ++++ +.+.|+ ++|||+|||.++|||++|++.++|.++.. ...+|.++|||++|+|+++|.+
T Consensus 4 ~~~~~~~~~~----~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 4 QVYRLVRPKF----FEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred cceEEeccce----EEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 4788888776 5998 888884 99999999999999999999999875321 1357899999999999998764
Q ss_pred CCCCCCCEEEEecCccc---------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH
Q 023273 80 KKFKVGDEVYGDINEKA---------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE 144 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~---------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~ 144 (284)
.|++||||+..+.... ..+...+|+|+||+++|++.++++|+++++++++++ .+++++|+++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence 7999999987532110 011224699999999999999999999999876644 57778999884
Q ss_pred ---hcccCCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEe
Q 023273 145 ---RSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (284)
Q Consensus 145 ---~~~~~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid 220 (284)
....++|++|+|+| +|++|++++++++. .++.+|++++++++|++.+++.+....++. +.+ ..++|++||
T Consensus 155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD 228 (341)
T cd08237 155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE 228 (341)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence 24568999999999 69999999999986 335789999999999999988765533321 111 136999999
Q ss_pred CCCC------cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCC-----CeeEee
Q 023273 221 AVGQ------CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESG-----KVKAII 277 (284)
Q Consensus 221 ~~g~------~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g-----~i~~~i 277 (284)
++|. .+.++++++++|+++++|.+..+..+ ++ ......++++++++++++| .+++.|
T Consensus 229 ~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 308 (341)
T cd08237 229 CVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLV 308 (341)
T ss_pred CCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHh
Confidence 9993 47899999999999999865432111 11 1122457899999999998 688899
Q ss_pred cccccC
Q 023273 278 DPKGLL 283 (284)
Q Consensus 278 ~~~~~~ 283 (284)
+++|||
T Consensus 309 ~~~~~l 314 (341)
T cd08237 309 GGVFPV 314 (341)
T ss_pred cccccc
Confidence 999986
No 21
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.7e-37 Score=275.69 Aligned_cols=273 Identities=21% Similarity=0.276 Sum_probs=209.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCC-CCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. + ++++ +.|.|+|+++||+|||.++++|++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~~~--~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~- 75 (355)
T cd08230 1 MKAIAVKPGKP--G-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG- 75 (355)
T ss_pred CceeEecCCCC--C-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-
Confidence 89999986443 2 7898 8999999999999999999999999999998754322 235789999999999999999
Q ss_pred CCCCCCCEEEEecCcc----c---c-------------CCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHH
Q 023273 80 KKFKVGDEVYGDINEK----A---L-------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~----~---~-------------~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 138 (284)
+.|++||||+..+... . . .+. ..+|+|++|+++|.+.++++|++++ +.+++..++.+
T Consensus 76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~ 153 (355)
T cd08230 76 SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSV 153 (355)
T ss_pred CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHH
Confidence 9999999998754210 0 0 010 1369999999999999999999998 34444455555
Q ss_pred HHHHHH-------hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEeeCCCccc
Q 023273 139 AYEGLE-------RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENI 208 (284)
Q Consensus 139 a~~al~-------~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~ 208 (284)
+++++. ..+.++|++|+|.| +|++|++++++|+.+ |++++++++ +++|++.++++|++. +++..+++
T Consensus 154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~ 230 (355)
T cd08230 154 VEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPV 230 (355)
T ss_pred HHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccch
Confidence 554442 12357899999998 699999999999996 889999887 688999999999986 45544332
Q ss_pred c--cCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--CCcee-------E---------EEeccHHHHHHHH
Q 023273 209 E--DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPASS-------F---------VLTSDGSILEKLN 265 (284)
Q Consensus 209 ~--~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~~-------~---------~~~~~~~~~~~~~ 265 (284)
. ....++|++||++|+ ...++++|+++|+++++|.+.. +..++ + ......+++.+++
T Consensus 231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~ 310 (355)
T cd08230 231 AEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAV 310 (355)
T ss_pred hhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHH
Confidence 2 124579999999996 3789999999999999987543 11111 1 0112356889999
Q ss_pred HHHHCCC------eeEeecccccC
Q 023273 266 PYFESGK------VKAIIDPKGLL 283 (284)
Q Consensus 266 ~~~~~g~------i~~~i~~~~~~ 283 (284)
++++++. ++++|+++|||
T Consensus 311 ~~l~~~~~~~~~~~~~~i~~~~~l 334 (355)
T cd08230 311 EDLAQWKYRWPGVLERLITRRVPL 334 (355)
T ss_pred HHHHhcccccccchHHheeeeecH
Confidence 9998776 67789999986
No 22
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.1e-37 Score=270.58 Aligned_cols=270 Identities=26% Similarity=0.353 Sum_probs=220.4
Q ss_pred CeEEEEcccCCCc--cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273 1 MKAWVYKEYGNSQ--SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 1 m~a~~~~~~g~~~--~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 78 (284)
||++++.+++.+. +.+++. +.|.|+|+++||+|++.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence 9999999988541 237888 78889999999999999999999999999887642 2346789999999999999999
Q ss_pred CCC-CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEE
Q 023273 79 VKK-FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157 (284)
Q Consensus 79 ~~~-~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ 157 (284)
+++ |++||+|++... .+|+|++|+.+|.+.++++|+++++++++.+++.+.|||.++...+. ++++++|+
T Consensus 79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~ 149 (324)
T cd08291 79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH 149 (324)
T ss_pred ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence 986 999999998652 14999999999999999999999999999888888899866655555 55566665
Q ss_pred -cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHH
Q 023273 158 -GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKA 228 (284)
Q Consensus 158 -ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~ 228 (284)
+++|++|++++++|+.+ |+++++++++++|.+.++++|++++++++..++.+ . ++++|++||++|+ ....
T Consensus 150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~ 228 (324)
T cd08291 150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQI 228 (324)
T ss_pred ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence 77999999999999996 99999999999999999999999999876544322 1 3579999999986 4678
Q ss_pred HHhhccCCEEEEEcCCCCC----C--------ceeEEE--------eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 229 LKAVKEGGRVVSIIGSVTP----P--------ASSFVL--------TSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 229 ~~~l~~~G~~v~~g~~~~~----~--------~~~~~~--------~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++++++|+++.+|..... . ..++.. ....+.+++++++++ |.+++.|+++|||
T Consensus 229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l 302 (324)
T cd08291 229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPL 302 (324)
T ss_pred HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcH
Confidence 9999999999999854211 1 111110 012567889999998 9999999999986
No 23
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.5e-37 Score=254.10 Aligned_cols=271 Identities=30% Similarity=0.449 Sum_probs=229.5
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|+++++++|+|.+.++++ ++++|+...++|+|+.+++.|||+|+..++|.||..+ ++|.+-|+|++|+|+.+|+++.+
T Consensus 21 kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~eVv~vGs~vkg 98 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGEVVAVGSNVKG 98 (354)
T ss_pred ceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEEEEEecCCcCc
Confidence 789999999998899999 8999988888899999999999999999999998665 67899999999999999999999
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~ 160 (284)
|++||+|+.... ..|+|++|.+.+++.++++++.++++.||.+..+.+|||.++ +..++.+||+|+-.||.
T Consensus 99 fk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan 170 (354)
T KOG0025|consen 99 FKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN 170 (354)
T ss_pred cCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence 999999998764 379999999999999999999999999999999999999999 56899999999999999
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEEeeCCCcc---ccc---CCCcccEEEeCCCC--cHHH
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKEN---IED---LPEKFDVVFDAVGQ--CDKA 228 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~---~~~---~~~~~d~vid~~g~--~~~~ 228 (284)
+.+|.+++|+|+++ |++.+-++++....+.+ +.+|+++++..++.. ..+ ....+.+.|||+|+ ...+
T Consensus 171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i 249 (354)
T KOG0025|consen 171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI 249 (354)
T ss_pred cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence 99999999999995 99999998866555444 579999998654322 111 24578899999995 5788
Q ss_pred HHhhccCCEEEEEcCCCC-CCcee-------------EEEe----------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 229 LKAVKEGGRVVSIIGSVT-PPASS-------------FVLT----------SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 229 ~~~l~~~G~~v~~g~~~~-~~~~~-------------~~~~----------~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
.+.|.++|.++.+|+.+. |..++ |++. ...+.++++.+|+.+|+|...-....||
T Consensus 250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L 328 (354)
T KOG0025|consen 250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL 328 (354)
T ss_pred HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence 999999999999999863 22221 1111 1236789999999999998776565554
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-36 Score=272.92 Aligned_cols=275 Identities=21% Similarity=0.293 Sum_probs=215.5
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
||+.+...+.+ ..+++. +.+.|+|+++||+|+|.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 6 ~a~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~--~~~p~i~GhE~aG~Vv~vG~~v~~ 81 (375)
T PLN02178 6 KAFGWAANDES-GVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF--SRYPIIPGHEIVGIATKVGKNVTK 81 (375)
T ss_pred eeEEEEEccCC-CCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC--CCCCcccCceeeEEEEEECCCCCc
Confidence 44555545543 347777 78888999999999999999999999999886531 245789999999999999999999
Q ss_pred CCCCCEEEEe-----cCcccc---------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273 82 FKVGDEVYGD-----INEKAL---------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (284)
Q Consensus 82 ~~~Gd~V~~~-----~~~~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (284)
|++||||+.. ++.+.. .+...+|+|++|+++|.+.++++|+++++++++++++.
T Consensus 82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~ 161 (375)
T PLN02178 82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA 161 (375)
T ss_pred cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence 9999999742 211100 01223699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc--cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCc-ccccC
Q 023273 136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKE-NIEDL 211 (284)
Q Consensus 136 ~~ta~~al~~~~--~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~-~~~~~ 211 (284)
..|+|+++.... .++|++|+|.| +|++|++++++|+.+ |+++++++.+++ +.+.++++|+++++++.+. .+...
T Consensus 162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~ 239 (375)
T PLN02178 162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 239 (375)
T ss_pred chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence 999999985433 36899999998 699999999999996 899988887655 4677789999988876432 12222
Q ss_pred CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI 276 (284)
Q Consensus 212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~ 276 (284)
.+++|++||++|. ...++++++++|+++.+|.+..+..++ + ......++++++++++++|++++.
T Consensus 240 ~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~ 319 (375)
T PLN02178 240 VGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD 319 (375)
T ss_pred hCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc
Confidence 3479999999985 378999999999999998754322111 1 112245789999999999999998
Q ss_pred ecccccC
Q 023273 277 IDPKGLL 283 (284)
Q Consensus 277 i~~~~~~ 283 (284)
| ++|||
T Consensus 320 i-~~~~l 325 (375)
T PLN02178 320 I-ELIKM 325 (375)
T ss_pred E-EEEeH
Confidence 8 56886
No 25
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3e-36 Score=269.83 Aligned_cols=274 Identities=25% Similarity=0.316 Sum_probs=222.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..+++. ++++ +.|.|.|+++||+|||.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 3 ~ka~~~~~~~~~---~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~ 75 (365)
T cd08277 3 CKAAVAWEAGKP---LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT 75 (365)
T ss_pred cEEEEEccCCCC---cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence 789999987765 7898 8899999999999999999999999999988653 35678999999999999999999
Q ss_pred CCCCCCEEEEecCcc-------ccC-------------------------------CCCCCCceeeEEeeecCceeeCCC
Q 023273 81 KFKVGDEVYGDINEK-------ALD-------------------------------HPKRNGSLAEYTAVEENLLALKPK 122 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~-------~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~ 122 (284)
++++||+|++.+... ... .....|+|++|++++.+.++++|+
T Consensus 76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence 999999998753110 000 001258999999999999999999
Q ss_pred CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEE
Q 023273 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLA 200 (284)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~ 200 (284)
++++++++++++++.|||+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|.+.++++|++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~ 233 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDF 233 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence 999999999999999999987 678899999999998 799999999999996 87 79999999999999999999888
Q ss_pred eeCCCcc--ccc-----CCCcccEEEeCCCC---cHHHHHhhccC-CEEEEEcCCCC-CC---------ceeE--EE-ec
Q 023273 201 IDYTKEN--IED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT-PP---------ASSF--VL-TS 256 (284)
Q Consensus 201 ~~~~~~~--~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~-G~~v~~g~~~~-~~---------~~~~--~~-~~ 256 (284)
++....+ +.+ ..+++|++||++|+ ...++++++++ |+++.+|.... .. ...+ .. ..
T Consensus 234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCC
Confidence 8765421 111 13579999999995 37889999885 99999987531 10 1111 11 11
Q ss_pred --cHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273 257 --DGSILEKLNPYFESGKV--KAIIDPKGLL 283 (284)
Q Consensus 257 --~~~~~~~~~~~~~~g~i--~~~i~~~~~~ 283 (284)
...++++++++++++.+ +++|+++|||
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l 344 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPF 344 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEch
Confidence 24578999999999875 4679999986
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.7e-36 Score=273.16 Aligned_cols=272 Identities=23% Similarity=0.289 Sum_probs=207.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCC-------CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEE
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-------EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE 73 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-------~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~ 73 (284)
|||+++.++++ ++++ +.|.|+|+ +|||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+
T Consensus 3 mka~v~~~~~~----~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~ 74 (393)
T TIGR02819 3 NRGVVYLGPGK----VEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI 74 (393)
T ss_pred ceEEEEecCCc----eeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence 99999998886 5888 88888874 68999999999999999999988642 3468999999999999
Q ss_pred EeCCCCCCCCCCCEEEEecC----cc-----------cc---------CCC----CCCCceeeEEeeecC--ceeeCCCC
Q 023273 74 KVGSQVKKFKVGDEVYGDIN----EK-----------AL---------DHP----KRNGSLAEYTAVEEN--LLALKPKN 123 (284)
Q Consensus 74 ~vG~~~~~~~~Gd~V~~~~~----~~-----------~~---------~~~----~~~g~~~~~~~~~~~--~~~~ip~~ 123 (284)
++|+++++|++||||+..+. .+ .. .+. ..+|+|+||+++|.. .++++|++
T Consensus 75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~ 154 (393)
T TIGR02819 75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR 154 (393)
T ss_pred EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence 99999999999999976421 10 00 010 136999999999964 79999998
Q ss_pred CCH----HhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEE-EeCChhhHHHHHHcCCc
Q 023273 124 LSF----VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLLRSLGAD 198 (284)
Q Consensus 124 ~~~----~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~-~~~~~~~~~~~~~~g~~ 198 (284)
++. ..++++..++.++|+++...++++|++|+|.| +|++|++++++|+.+ |+++++ ++.+++|.+.++++|++
T Consensus 155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~ 232 (393)
T TIGR02819 155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCE 232 (393)
T ss_pred ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCe
Confidence 653 34567788889999999888899999999976 799999999999996 877554 45688899999999987
Q ss_pred EEeeC-CCccccc----C--CCcccEEEeCCCC-----------------cHHHHHhhccCCEEEEEcCCC-CCC-c---
Q 023273 199 LAIDY-TKENIED----L--PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSV-TPP-A--- 249 (284)
Q Consensus 199 ~~~~~-~~~~~~~----~--~~~~d~vid~~g~-----------------~~~~~~~l~~~G~~v~~g~~~-~~~-~--- 249 (284)
. +++ ...++.+ . .+++|++||++|. ++.++++++++|+++.+|.+. .+. .
T Consensus 233 ~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~ 311 (393)
T TIGR02819 233 T-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDA 311 (393)
T ss_pred E-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccc
Confidence 4 443 2222211 1 3579999999994 467899999999999999863 111 0
Q ss_pred ------eeEEE------------e-ccH-HHHHHHHHHHHCCCeeE--eec-ccccC
Q 023273 250 ------SSFVL------------T-SDG-SILEKLNPYFESGKVKA--IID-PKGLL 283 (284)
Q Consensus 250 ------~~~~~------------~-~~~-~~~~~~~~~~~~g~i~~--~i~-~~~~~ 283 (284)
+++.. . ... +.+.++++++++|++++ +|+ ++|||
T Consensus 312 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l 368 (393)
T TIGR02819 312 AAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL 368 (393)
T ss_pred cccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH
Confidence 11100 0 011 23468999999999864 455 78886
No 27
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.3e-36 Score=268.74 Aligned_cols=274 Identities=24% Similarity=0.326 Sum_probs=220.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|+++++..+++. ++++ +.+.|+|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 10 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~--~~~p~i~G~E~~G~Vv~vG~~v~ 83 (357)
T PLN02514 10 TTGWAARDPSGH---LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM--SNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_pred EEEEEEecCCCC---ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc--CCCCccCCceeeEEEEEECCCcc
Confidence 578999999976 8898 88999999999999999999999999998886532 24678999999999999999999
Q ss_pred CCCCCCEEEEe-----cCccc---------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273 81 KFKVGDEVYGD-----INEKA---------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (284)
Q Consensus 81 ~~~~Gd~V~~~-----~~~~~---------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 134 (284)
+|++||+|+.. ++.+. ..+...+|+|++|+++|.+.++++|+++++++++.+++
T Consensus 84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 163 (357)
T PLN02514 84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC 163 (357)
T ss_pred cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence 99999999742 11100 00112369999999999999999999999999999999
Q ss_pred hHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCc-ccccC
Q 023273 135 ATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIEDL 211 (284)
Q Consensus 135 ~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~ 211 (284)
++.|||+++.. ...++|++++|+| +|++|++++++|+.+ |+++++++.++++...+ +++|++.++++... .+.+.
T Consensus 164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~ 241 (357)
T PLN02514 164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEA 241 (357)
T ss_pred hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHh
Confidence 99999999854 5567999999997 799999999999996 88999888887776555 67998877765432 22233
Q ss_pred CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCCCeeEe
Q 023273 212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESGKVKAI 276 (284)
Q Consensus 212 ~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g~i~~~ 276 (284)
..++|++||++|. ...++++++++|+++.+|.+..+..++ + .......+++++++++++|++++.
T Consensus 242 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~ 321 (357)
T PLN02514 242 ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM 321 (357)
T ss_pred cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc
Confidence 4579999999984 478999999999999998764321111 1 112345689999999999999988
Q ss_pred ecccccC
Q 023273 277 IDPKGLL 283 (284)
Q Consensus 277 i~~~~~~ 283 (284)
| ++|||
T Consensus 322 i-~~~~l 327 (357)
T PLN02514 322 I-EVVKM 327 (357)
T ss_pred E-EEEcH
Confidence 8 47886
No 28
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.6e-36 Score=262.32 Aligned_cols=271 Identities=24% Similarity=0.322 Sum_probs=225.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++.+++++.+.++++ +.|.|.+.++||+|++.++++|++|++.+.|.++. ....|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence 9999999887642347888 88999999999999999999999999998887642 234578899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~ 160 (284)
++++||+|++... .|+|++|+.++...++++|++++.++++.+++.+.|+|+++...++.+|++|+|+|++
T Consensus 79 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~ 149 (324)
T cd08292 79 GLQVGQRVAVAPV---------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG 149 (324)
T ss_pred CCCCCCEEEeccC---------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence 9999999998642 5899999999999999999999999999998888999999877899999999999999
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhh
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l 232 (284)
|.+|++++++|+.+ |+++++++.++++.+.++++|.+.+++++...+.. . ++++|++||++|+ ...+++++
T Consensus 150 g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l 228 (324)
T cd08292 150 GAVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL 228 (324)
T ss_pred cHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence 99999999999996 99999999999999988889988888876544322 1 3579999999986 47889999
Q ss_pred ccCCEEEEEcCCCC-C----------CceeEEEec------------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 233 KEGGRVVSIIGSVT-P----------PASSFVLTS------------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 233 ~~~G~~v~~g~~~~-~----------~~~~~~~~~------------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++|+++.+|.... . .+..+.... ..+.++++++++.+|.+++.+.++||+
T Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~ 302 (324)
T cd08292 229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDL 302 (324)
T ss_pred cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecH
Confidence 99999999985421 1 111221100 134688899999999998767777764
No 29
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=9.7e-36 Score=264.84 Aligned_cols=272 Identities=23% Similarity=0.343 Sum_probs=215.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
|||+++++++. ++++ +.|.|+| .++||+|||.++++|++|.+.+.... ...+|.++|||++|+|+++|+++
T Consensus 1 Mka~~~~~~~~----~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v 72 (347)
T PRK10309 1 MKSVVNDTDGI----VRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGV 72 (347)
T ss_pred CceEEEeCCCc----eEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCC
Confidence 99999998775 5888 7888987 58999999999999999987542211 11357899999999999999999
Q ss_pred CCCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
++|++||+|++.+... ...+...+|+|++|+.+|.+.++++|+++++++++.+. ++.++|+
T Consensus 73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 9999999998864210 00112247999999999999999999999998888763 4456888
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCcc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF 215 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~ 215 (284)
++.....+++++|+|+| +|++|++++++|+.+ |++ ++++++++++.+.++++|++++++++...... . ..++
T Consensus 152 ~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 88778889999999998 799999999999996 886 67888899999999999999888876433211 1 3478
Q ss_pred c-EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-------------eeEE--Eec-----cHHHHHHHHHHHHCC
Q 023273 216 D-VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-------------SSFV--LTS-----DGSILEKLNPYFESG 271 (284)
Q Consensus 216 d-~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-------------~~~~--~~~-----~~~~~~~~~~~~~~g 271 (284)
| ++|||+|. ...++++|+++|+++.+|.+..+.. +.+. ... ..++++++++++++|
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g 309 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER 309 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence 8 99999995 3789999999999999986542211 1111 111 147889999999999
Q ss_pred Ce--eEeecccccC
Q 023273 272 KV--KAIIDPKGLL 283 (284)
Q Consensus 272 ~i--~~~i~~~~~~ 283 (284)
++ ++.|+++|||
T Consensus 310 ~i~~~~~i~~~~~l 323 (347)
T PRK10309 310 KLSLEPLIAHRGSF 323 (347)
T ss_pred CCCchhheEEEeeH
Confidence 98 4779999986
No 30
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=7.9e-36 Score=265.79 Aligned_cols=275 Identities=30% Similarity=0.428 Sum_probs=220.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCC-C--CC------CCCCCCcccccceeEE
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-F--SA------TDSPLPTIPGYDVAGV 71 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~-~--~~------~~~~~p~~~G~e~~G~ 71 (284)
|||+++..++. ++++ +.+.|+|+++||+||+.++++|++|++.+.+. + +. .....|.++|||++|+
T Consensus 1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~ 75 (351)
T cd08233 1 MKAARYHGRKD----IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGV 75 (351)
T ss_pred CceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEE
Confidence 99999998765 6898 88999999999999999999999998876542 1 10 0123678999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEecCccc------------------cCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273 72 VEKVGSQVKKFKVGDEVYGDINEKA------------------LDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (284)
Q Consensus 72 V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (284)
|+++|+++++|++||+|++...... ..+. ..+|+|++|+.++.+.++++|++++.++++.+
T Consensus 76 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~ 155 (351)
T cd08233 76 VVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV 155 (351)
T ss_pred EEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence 9999999999999999987432110 0001 12699999999999999999999998888765
Q ss_pred cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-
Q 023273 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED- 210 (284)
Q Consensus 133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 210 (284)
.++.|||+++...++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++.+++++..++.+
T Consensus 156 -~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 232 (351)
T cd08233 156 -EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAE 232 (351)
T ss_pred -cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHH
Confidence 5778999999878899999999998 699999999999996 88 788888899999999999999888876544322
Q ss_pred ---C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEE--EeccHHHHHHHHHHHHC
Q 023273 211 ---L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFES 270 (284)
Q Consensus 211 ---~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~ 270 (284)
. .+++|++||++|. ...++++|+++|+++.+|....+.. .++. .....++++++++++++
T Consensus 233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 312 (351)
T cd08233 233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLAS 312 (351)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHc
Confidence 1 3469999999984 4789999999999999987642221 1111 12345789999999999
Q ss_pred CCee--EeecccccC
Q 023273 271 GKVK--AIIDPKGLL 283 (284)
Q Consensus 271 g~i~--~~i~~~~~~ 283 (284)
|+|+ +.|+++|||
T Consensus 313 g~l~~~~~i~~~~~l 327 (351)
T cd08233 313 GKIDAEPLITSRIPL 327 (351)
T ss_pred CCCChHHheEEEecH
Confidence 9995 568888886
No 31
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.8e-36 Score=265.31 Aligned_cols=271 Identities=21% Similarity=0.372 Sum_probs=215.8
Q ss_pred EEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023273 4 WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (284)
Q Consensus 4 ~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 83 (284)
+++++++++ ++++ +.|.|+|+++||+|||.++++|++|++.+.+.+. ....+|.++|||++|+|+++|+++..+
T Consensus 2 ~~~~~~g~~---~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~- 75 (349)
T TIGR03201 2 WMMTEPGKP---MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW- 75 (349)
T ss_pred ceEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence 456777765 6888 8899999999999999999999999998744321 123467899999999999999999877
Q ss_pred CCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCC------CCCHHhhhcccchHHHH
Q 023273 84 VGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPK------NLSFVEAASLPLATETA 139 (284)
Q Consensus 84 ~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta 139 (284)
+||+|+..+... ...+...+|+|++|+++|.+.++++|+ ++++++++.+++++.|+
T Consensus 76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 999998742110 011222469999999999999999999 89988888889999999
Q ss_pred HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---ccc----C-
Q 023273 140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED----L- 211 (284)
Q Consensus 140 ~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~----~- 211 (284)
|+++...++++|++|+|+|+ |++|++++++|+.+ |+++++++++++|++.++++|++.++++...+ +.+ .
T Consensus 156 ~~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 99997788999999999996 99999999999996 88999999999999999999998888865432 111 1
Q ss_pred -CCccc----EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee----------E--EEeccHHHHHHHHHHHHCC
Q 023273 212 -PEKFD----VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS----------F--VLTSDGSILEKLNPYFESG 271 (284)
Q Consensus 212 -~~~~d----~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~g 271 (284)
+.++| ++|||+|+ ...++++++++|+++++|.+..+..++ + ......++++++++++++|
T Consensus 234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g 313 (349)
T TIGR03201 234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG 313 (349)
T ss_pred ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence 24675 89999996 367899999999999998764322211 1 1112457899999999999
Q ss_pred CeeE--eecccccC
Q 023273 272 KVKA--IIDPKGLL 283 (284)
Q Consensus 272 ~i~~--~i~~~~~~ 283 (284)
+|++ .++ +|||
T Consensus 314 ~i~~~~~i~-~~~l 326 (349)
T TIGR03201 314 KIQLGPFVE-RRPL 326 (349)
T ss_pred CCCcccceE-EecH
Confidence 9865 565 6775
No 32
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=8.6e-36 Score=264.41 Aligned_cols=274 Identities=30% Similarity=0.375 Sum_probs=207.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCc-ccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT-IPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++.. .+++ +.+.|.+.++||+|||.++|||+||++.+.|..+..+ .+. ++|||++|+|+++| .+
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~--~~~~i~GHE~~G~V~evG-~~ 73 (350)
T COG1063 1 MKAAVVYVGGGD---VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVP--PGDIILGHEFVGEVVEVG-VV 73 (350)
T ss_pred CceeEEEecCCc---cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCC--CCCcccCccceEEEEEec-cc
Confidence 888888877765 3466 6666678999999999999999999999998654332 333 89999999999999 77
Q ss_pred CCCCCCCEEEEecCc--------------ccc---------CCCCCCCceeeEEeeecCceee-CCCCCCHHhhhcccch
Q 023273 80 KKFKVGDEVYGDINE--------------KAL---------DHPKRNGSLAEYTAVEENLLAL-KPKNLSFVEAASLPLA 135 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~--------------~~~---------~~~~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~ 135 (284)
+.+++||||+..+.. ... .+...+|+|+||+++|.+.+++ +|+++ +.+.+++..+
T Consensus 74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep 152 (350)
T COG1063 74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP 152 (350)
T ss_pred cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence 889999999776421 000 0112579999999999765554 58887 5677788778
Q ss_pred HHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccc----
Q 023273 136 TETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIE---- 209 (284)
Q Consensus 136 ~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~---- 209 (284)
+.++|++. ......++++|+|+| +|++|++++++++..+..+|++++.+++|++++++ .+++.+++...++..
T Consensus 153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~ 231 (350)
T COG1063 153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231 (350)
T ss_pred hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence 88998875 455555666999999 89999999999999744678888999999999998 556655555443211
Q ss_pred cC--CCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-ce----------eEEE--e-ccHHHHHHHHHHHHC
Q 023273 210 DL--PEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-AS----------SFVL--T-SDGSILEKLNPYFES 270 (284)
Q Consensus 210 ~~--~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~----------~~~~--~-~~~~~~~~~~~~~~~ 270 (284)
.. +.++|++|||+|+. .+++++++++|+++++|.+.... .+ ++.. . ....+++.+++++++
T Consensus 232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~ 311 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLAS 311 (350)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHc
Confidence 11 34799999999974 79999999999999999875442 12 1111 1 234689999999999
Q ss_pred CCeeE--eecccccC
Q 023273 271 GKVKA--IIDPKGLL 283 (284)
Q Consensus 271 g~i~~--~i~~~~~~ 283 (284)
|++++ +|+++++|
T Consensus 312 g~i~~~~lit~~~~~ 326 (350)
T COG1063 312 GKIDPEKLITHRLPL 326 (350)
T ss_pred CCCChhHceEeeccH
Confidence 99866 57888763
No 33
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.8e-35 Score=266.43 Aligned_cols=277 Identities=24% Similarity=0.347 Sum_probs=210.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHH-cCCCC----CCCCCCCcccccceeEEEEEe
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFS----ATDSPLPTIPGYDVAGVVEKV 75 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~----~~~~~~p~~~G~e~~G~V~~v 75 (284)
||++++.+++. ++++ +.|.|+|+++||+|||.++|+|++|++.+ .|... ....++|.++|||++|+|+++
T Consensus 3 ~~a~~~~~~~~----l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 3 TKAWRMYGKGD----LRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred cEEEEEEcCCc----eEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 78888888775 6898 88999999999999999999999999976 45421 111246889999999999999
Q ss_pred CCCCC-CCCCCCEEEEecCccc-------cCCCCCCCceeeEEeeecC----ceeeCCCCCCHHhhhcc-cchH-HHHHH
Q 023273 76 GSQVK-KFKVGDEVYGDINEKA-------LDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASL-PLAT-ETAYE 141 (284)
Q Consensus 76 G~~~~-~~~~Gd~V~~~~~~~~-------~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~~-~ta~~ 141 (284)
|++++ +|++||||++.+.... ..+...+|+|++|+++|.+ .++++|+++++++++.+ +.++ .+++.
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99998 6999999988632110 1122347999999999987 68999999999888765 4222 23444
Q ss_pred HH---------HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCChhhHHHHHHc--------CCc-EE
Q 023273 142 GL---------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSL--------GAD-LA 200 (284)
Q Consensus 142 al---------~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~~~~~~~~~~~--------g~~-~~ 200 (284)
++ ...++++|++|+|+|++|++|++++++|+.+ |. +|++++.+++|++.++++ |++ .+
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~ 236 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY 236 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence 32 3467899999999998999999999999985 43 799999999999999987 655 45
Q ss_pred eeCCC-ccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC-C--CCcee----------E--EEe
Q 023273 201 IDYTK-ENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T--PPASS----------F--VLT 255 (284)
Q Consensus 201 ~~~~~-~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~-~--~~~~~----------~--~~~ 255 (284)
++++. +++.+ . ++++|++||++|+ ...++++++++|+++.+++.. . +..++ + ...
T Consensus 237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 316 (410)
T cd08238 237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG 316 (410)
T ss_pred ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC
Confidence 66543 22221 1 3579999999985 478999999999988775431 1 11121 1 112
Q ss_pred ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 256 SDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 256 ~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
....+++++++++++|++++ +|+++|||
T Consensus 317 ~~~~~~~~~~~li~~g~i~~~~~it~~~~l 346 (410)
T cd08238 317 GNTDDMKEAIDLMAAGKLNPARMVTHIGGL 346 (410)
T ss_pred CCHHHHHHHHHHHHcCCCchhhcEEEEecH
Confidence 24678999999999999988 79999986
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.5e-34 Score=254.34 Aligned_cols=274 Identities=27% Similarity=0.349 Sum_probs=224.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.. ++++ +.+.|++.++||+|++.++++|++|...+.|.++. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~ 74 (333)
T cd08296 1 YKAVQVTEPGGP---LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVS 74 (333)
T ss_pred CeEEEEccCCCC---ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCc
Confidence 999999988654 7898 88989999999999999999999999998886542 24578899999999999999999
Q ss_pred CCCCCCEEEEec-----Cccc--------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDI-----NEKA--------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~-----~~~~--------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
+|++||+|++.+ +++. ..+....|+|++|+.++.+.++++|+++++.+++.+++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 999999998732 1110 011223589999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC---CCcccEE
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV 218 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~d~v 218 (284)
++...++.++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|+++++++...++.+. .+++|++
T Consensus 155 ~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v 232 (333)
T cd08296 155 ALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI 232 (333)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence 99766899999999999 899999999999996 999999999999999999999988888765433221 2579999
Q ss_pred EeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE--eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 219 FDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 219 id~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
||++|. ...++++++++|+++.+|...... +..+.. .....+++.++++++++.+++.+ ++||+
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v-~~~~~ 311 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMV-ETFPL 311 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceE-EEEEH
Confidence 999863 478999999999999998654221 111111 23457889999999999998876 46764
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.1e-34 Score=255.52 Aligned_cols=274 Identities=27% Similarity=0.367 Sum_probs=221.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++. ++++ +.+.|.+.++||+|++.++++|++|++.+.+.++. ...|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~----~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~ 73 (351)
T cd08285 1 MKAFAMLGIGK----VGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVK 73 (351)
T ss_pred CceEEEccCCc----cEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcC
Confidence 99999998886 4787 78888899999999999999999999988776532 34578999999999999999999
Q ss_pred CCCCCCEEEEecC----cc-------c----------cCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHH
Q 023273 81 KFKVGDEVYGDIN----EK-------A----------LDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATE 137 (284)
Q Consensus 81 ~~~~Gd~V~~~~~----~~-------~----------~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ 137 (284)
++++||+|++.+. ++ . ..+...+|+|++|+.++.+ .++++|+++++++++.++..+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 9999999988431 00 0 0011136999999999874 8999999999999999999999
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (284)
Q Consensus 138 ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~- 211 (284)
|||+++...+++++++|+|+| +|++|++++++|+.+ |. .++++++++++.+.++++|.+.+++++..++.. .
T Consensus 154 ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (351)
T cd08285 154 TGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT 231 (351)
T ss_pred hHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence 999998778899999999997 799999999999996 87 578888899999999999998888876543321 1
Q ss_pred -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC--ce------------eEE--E-eccHHHHHHHHHHHHC
Q 023273 212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP--AS------------SFV--L-TSDGSILEKLNPYFES 270 (284)
Q Consensus 212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~--~~------------~~~--~-~~~~~~~~~~~~~~~~ 270 (284)
++++|++||++|+ ...++++|+++|+++.+|...... .+ .+. . ....++++++++++++
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 311 (351)
T cd08285 232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEY 311 (351)
T ss_pred CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHc
Confidence 3579999999985 378999999999999987654211 11 111 1 1235689999999999
Q ss_pred CCeeE---eecccccC
Q 023273 271 GKVKA---IIDPKGLL 283 (284)
Q Consensus 271 g~i~~---~i~~~~~~ 283 (284)
|+|++ .++++|||
T Consensus 312 g~i~~~~~~~~~~~~l 327 (351)
T cd08285 312 GRVDPSKLLTHHFFGF 327 (351)
T ss_pred CCCChhhceeccccCH
Confidence 99988 56666765
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=4.8e-34 Score=255.23 Aligned_cols=274 Identities=27% Similarity=0.367 Sum_probs=219.4
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|++++.++++. ++++ +.+.|+|+++||+|+|.++++|++|+....|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~ 75 (361)
T cd08231 2 RAAVLTGPGKP---LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTT 75 (361)
T ss_pred eEEEEcCCCCC---CEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCccc
Confidence 78999988854 7998 88999999999999999999999999999887642 356789999999999999999986
Q ss_pred ------CCCCCEEEEecC----ccc--------------cCC-------CCCCCceeeEEeeecC-ceeeCCCCCCHHhh
Q 023273 82 ------FKVGDEVYGDIN----EKA--------------LDH-------PKRNGSLAEYTAVEEN-LLALKPKNLSFVEA 129 (284)
Q Consensus 82 ------~~~Gd~V~~~~~----~~~--------------~~~-------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a 129 (284)
|++||+|++.+. ++. ..+ ....|+|++|+.++.+ .++++|++++..++
T Consensus 76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a 155 (361)
T cd08231 76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA 155 (361)
T ss_pred cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence 999999988731 110 000 1136999999999986 79999999998888
Q ss_pred hcccchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273 130 ASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (284)
Q Consensus 130 a~~~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (284)
+++++++.|||+++.. ....++++|||+| +|++|++++++|+.+ |+ +++++++++++.+.++++|.+.+++++...
T Consensus 156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 233 (361)
T cd08231 156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELP 233 (361)
T ss_pred HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccc
Confidence 8888999999999965 4455999999998 799999999999996 88 899999999999999999998888765433
Q ss_pred cc-------cC--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--EeccHHHH
Q 023273 208 IE-------DL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTSDGSIL 261 (284)
Q Consensus 208 ~~-------~~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~~~~~~ 261 (284)
.. .. .+++|++||++|+ ...++++++++|+++.+|...... .+.+. .....+++
T Consensus 234 ~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (361)
T cd08231 234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHL 313 (361)
T ss_pred cHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhH
Confidence 21 11 3579999999985 478899999999999998653111 11111 11245678
Q ss_pred HHHHHHHHCC--C--eeEeecccccC
Q 023273 262 EKLNPYFESG--K--VKAIIDPKGLL 283 (284)
Q Consensus 262 ~~~~~~~~~g--~--i~~~i~~~~~~ 283 (284)
+++++++.++ . ++++|+++|||
T Consensus 314 ~~~~~~~~~~~~~~~~~~~i~~~~~l 339 (361)
T cd08231 314 YRAVRFLERTQDRFPFAELVTHRYPL 339 (361)
T ss_pred HHHHHHHHhccCcCCchhheeeeeeH
Confidence 8899998877 3 45678888875
No 37
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.2e-34 Score=253.26 Aligned_cols=280 Identities=31% Similarity=0.433 Sum_probs=221.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC------------------CCCCCCc
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------------------TDSPLPT 62 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~------------------~~~~~p~ 62 (284)
||++++..++.+ ..+.+.++.+.|+|.+++|+|+|.++++|++|++.+.|.++. .....|.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 79 (350)
T cd08274 1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR 79 (350)
T ss_pred CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence 899999887765 446665234677789999999999999999999988776531 1235678
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEecCccc----------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273 63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKA----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (284)
Q Consensus 63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (284)
++|||++|+|+++|+++++|++||+|++.+.... ..+...+|+|++|+.++.+.++++|+++++.+++++
T Consensus 80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l 159 (350)
T cd08274 80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF 159 (350)
T ss_pred ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence 9999999999999999999999999988531110 011223599999999999999999999999999999
Q ss_pred cchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---
Q 023273 133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--- 209 (284)
Q Consensus 133 ~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 209 (284)
++++.|||+++...++.++++|+|+|++|.+|++++++|+.+ |+++++++.++ +.+.++++|.+.+++.+.....
T Consensus 160 ~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (350)
T cd08274 160 PCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAK 237 (350)
T ss_pred ccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHH
Confidence 999999999997788999999999998899999999999996 99998888665 8888899998755554332211
Q ss_pred -cCCCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Cce----------eE--EEeccHHHHHHHHHHHHCCCe
Q 023273 210 -DLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PAS----------SF--VLTSDGSILEKLNPYFESGKV 273 (284)
Q Consensus 210 -~~~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~----------~~--~~~~~~~~~~~~~~~~~~g~i 273 (284)
...+++|++||++|+ ...++++|+++|+++.+|....+ ..+ .+ ........+.++++++.++++
T Consensus 238 ~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 317 (350)
T cd08274 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEI 317 (350)
T ss_pred hhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCc
Confidence 124679999999985 58899999999999998754221 111 11 111246789999999999999
Q ss_pred eEeecccccC
Q 023273 274 KAIIDPKGLL 283 (284)
Q Consensus 274 ~~~i~~~~~~ 283 (284)
++.+.++|++
T Consensus 318 ~~~~~~~~~~ 327 (350)
T cd08274 318 RPVVAKTFPL 327 (350)
T ss_pred ccccccccCH
Confidence 9888888774
No 38
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=6.7e-34 Score=252.14 Aligned_cols=255 Identities=29% Similarity=0.384 Sum_probs=205.0
Q ss_pred cceEEeccccC----CCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccce--eEEEEEeCCCCCCCCCCCE
Q 023273 14 SVLKFETNVEV----PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV--AGVVEKVGSQVKKFKVGDE 87 (284)
Q Consensus 14 ~~~~~~~~~~~----~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~~~~~~~~Gd~ 87 (284)
++++++ +.+. |+|++|||+|||++++||+.|+..+.|..+. ....|.++|++. .|.+..+|++++.|++||+
T Consensus 19 ~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~ 96 (338)
T cd08295 19 SDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL 96 (338)
T ss_pred cceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence 679998 7777 8899999999999999999999988885321 124577888754 4556567888889999999
Q ss_pred EEEecCccccCCCCCCCceeeEEeeec-CceeeCC-CCCCHH-hhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchH
Q 023273 88 VYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKP-KNLSFV-EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGV 163 (284)
Q Consensus 88 V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~ 163 (284)
|+++ |+|+||+++|. ..++++| +++++. +++++++++.|||+++ +..++++|++|+|+|++|++
T Consensus 97 V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v 164 (338)
T cd08295 97 VWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV 164 (338)
T ss_pred EEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 9873 68999999999 7999995 678876 7888999999999999 56889999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhcc
Q 023273 164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKE 234 (284)
Q Consensus 164 G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~ 234 (284)
|++++|+|+.+ |++++++++++++.+.+++ +|+++++++..+ ++.+ ..+++|++||++|+ ...++++|++
T Consensus 165 G~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~ 243 (338)
T cd08295 165 GQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNL 243 (338)
T ss_pred HHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhcc
Confidence 99999999995 9999999999999999998 999988886432 3221 13589999999985 5789999999
Q ss_pred CCEEEEEcCCCCC-C-------c--------eeEE---Eecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 235 GGRVVSIIGSVTP-P-------A--------SSFV---LTSD----GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 235 ~G~~v~~g~~~~~-~-------~--------~~~~---~~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+|+++.+|..... . . +++. .... .+.++++++++++|++++.+.++|||
T Consensus 244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 315 (338)
T cd08295 244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGL 315 (338)
T ss_pred CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCH
Confidence 9999998754311 0 0 0111 1111 34578899999999999988777875
No 39
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.2e-33 Score=250.49 Aligned_cols=275 Identities=32% Similarity=0.406 Sum_probs=222.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++.+++.+ +++. +.+.|++.+++++|++.++++|++|+....|.++. .+..+|.++|+|++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v 76 (340)
T cd05284 1 MKAARLYEYGKP---LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGV 76 (340)
T ss_pred CeeeEeccCCCC---ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCC
Confidence 899999998765 7888 78888999999999999999999999998887643 234567899999999999999999
Q ss_pred CCCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
++|++||+|++.... ....+...+|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~ 156 (340)
T cd05284 77 DGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYH 156 (340)
T ss_pred CcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 999999999886421 00112234689999999999999999999999999999999999999
Q ss_pred HHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--C
Q 023273 142 GLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--P 212 (284)
Q Consensus 142 al~~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~ 212 (284)
++.. ..+.++++|+|+| +|++|++++++|+.+ | .+++++++++++.+.++++|.+++++++.. +.. . .
T Consensus 157 ~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~ 233 (340)
T cd05284 157 AVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGG 233 (340)
T ss_pred HHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCC
Confidence 9854 4688899999999 677999999999996 6 899999999999999999999888887654 221 1 3
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-C--------CceeEEE--eccHHHHHHHHHHHHCCCeeEeec
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-P--------PASSFVL--TSDGSILEKLNPYFESGKVKAIID 278 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~--------~~~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~ 278 (284)
.++|+++|++|+ ...++++|+++|+++.+|.... + .+..+.. ....+.++.+++++++|.+++.+
T Consensus 234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~- 312 (340)
T cd05284 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEI- 312 (340)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcce-
Confidence 479999999985 4788999999999999975431 1 1222221 22467889999999999988644
Q ss_pred ccccC
Q 023273 279 PKGLL 283 (284)
Q Consensus 279 ~~~~~ 283 (284)
++|++
T Consensus 313 ~~~~~ 317 (340)
T cd05284 313 TKFPL 317 (340)
T ss_pred EEEeH
Confidence 45553
No 40
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=6.3e-34 Score=252.88 Aligned_cols=257 Identities=25% Similarity=0.319 Sum_probs=199.8
Q ss_pred cceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEe
Q 023273 14 SVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD 91 (284)
Q Consensus 14 ~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 91 (284)
+.++++ +.+.|+|. +|||+|||.++|||+.|......... ....++|.++|||++|+|+++|+++++|++||+|++.
T Consensus 21 ~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 21 ENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred cceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 458888 88999875 99999999999999999643322110 1123467889999999999999999999999999874
Q ss_pred cCccccCCCCCCCceeeEEeeecCceeeCCCCCCHH----hhhcccchHHHHHHHH-HhcccCCC--CEEEEEcCCchHH
Q 023273 92 INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV----EAASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVG 164 (284)
Q Consensus 92 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~----~aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~ga~g~~G 164 (284)
. ++|++|++++.+.++++|+++++. .+++++.++.|||+++ +.+++++| ++|+|+|++|++|
T Consensus 100 ~-----------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG 168 (345)
T cd08293 100 N-----------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG 168 (345)
T ss_pred C-----------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence 1 579999999999999999985332 2456678899999998 56778776 9999999999999
Q ss_pred HHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHHhhccC
Q 023273 165 TMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEG 235 (284)
Q Consensus 165 ~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~~ 235 (284)
++++|+|+++ |+ +|+++++++++.+.+++ +|++++++++..++.+ ..+++|++||++|+ ...++++|+++
T Consensus 169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~ 247 (345)
T cd08293 169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN 247 (345)
T ss_pred HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence 9999999996 88 79999999999998876 9999999886544332 13589999999986 47899999999
Q ss_pred CEEEEEcCCC---C-----C------------CceeEEE---ecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 236 GRVVSIIGSV---T-----P------------PASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 236 G~~v~~g~~~---~-----~------------~~~~~~~---~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
|+++.+|... . + ..+.+.. ... .+.++++++++++|.+++.+..++||
T Consensus 248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l 322 (345)
T cd08293 248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGL 322 (345)
T ss_pred CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecH
Confidence 9999987421 0 0 1111111 111 34578888999999998875555553
No 41
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1e-33 Score=250.98 Aligned_cols=274 Identities=22% Similarity=0.280 Sum_probs=217.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++.+++. ++++ +.+.|+|+++|++|++.++++|++|++.+.|.++. .++|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~ 73 (339)
T PRK10083 1 MKSIVIEKPNS----LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVD 73 (339)
T ss_pred CeEEEEecCCe----eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCc
Confidence 99999998775 6888 88999999999999999999999999998887542 24688999999999999999999
Q ss_pred CCCCCCEEEEecCccc-------cC-----------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINEKA-------LD-----------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------~~-----------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.+++||+|+..+.... .. ....+|+|++|++++.+.++++|+++++++++ +..++.+++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 9999999985321100 00 11236899999999999999999999987765 55667788876
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccccC----CCcccE
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV 217 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~d~ 217 (284)
+...++++|++|+|+| +|++|++++++|+.+.|++ +++++++++|.+.++++|++.+++++...+... +.++|+
T Consensus 153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~ 231 (339)
T PRK10083 153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTL 231 (339)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCE
Confidence 6788999999999999 7999999999999623775 666778899999999999998988765432221 224679
Q ss_pred EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE-eccHHHHHHHHHHHHCCCeeE--eecccc
Q 023273 218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL-TSDGSILEKLNPYFESGKVKA--IIDPKG 281 (284)
Q Consensus 218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~g~i~~--~i~~~~ 281 (284)
+||++|. ...++++|+++|+++.+|....+.. +.+.. ....+.++++++++++|.+++ .++++|
T Consensus 232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 311 (339)
T PRK10083 232 IIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTF 311 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeee
Confidence 9999984 4889999999999999986532211 11111 123578999999999999987 477888
Q ss_pred cC
Q 023273 282 LL 283 (284)
Q Consensus 282 ~~ 283 (284)
|+
T Consensus 312 ~l 313 (339)
T PRK10083 312 DF 313 (339)
T ss_pred cH
Confidence 75
No 42
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-33 Score=248.64 Aligned_cols=255 Identities=29% Similarity=0.386 Sum_probs=202.1
Q ss_pred cceEEecc--ccCC-CCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCccccc--ceeEEEEEeCCCCCCCCCCCEE
Q 023273 14 SVLKFETN--VEVP-SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY--DVAGVVEKVGSQVKKFKVGDEV 88 (284)
Q Consensus 14 ~~~~~~~~--~~~~-~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~--e~~G~V~~vG~~~~~~~~Gd~V 88 (284)
++|++.+. .+.| ++++|||+||+.++++|+.|...+.+..+ ...+|.++|+ |++|+|..+|+++++|++||+|
T Consensus 25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V 102 (348)
T PLN03154 25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLI 102 (348)
T ss_pred ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEE
Confidence 46888821 3454 35899999999999999998765433221 1135788997 8899999999999999999999
Q ss_pred EEecCccccCCCCCCCceeeEEeeecCc--eee--CCCCCCHH-hhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCch
Q 023273 89 YGDINEKALDHPKRNGSLAEYTAVEENL--LAL--KPKNLSFV-EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGG 162 (284)
Q Consensus 89 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--ip~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~ 162 (284)
++ .|+|++|.+++.+. +++ +|++++++ +++++++++.|||+++ ...++++|++|+|+|++|+
T Consensus 103 ~~------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~ 170 (348)
T PLN03154 103 SG------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGA 170 (348)
T ss_pred Ee------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccH
Confidence 87 36899999998753 544 58999886 6778899999999998 5688999999999998899
Q ss_pred HHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhc
Q 023273 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVK 233 (284)
Q Consensus 163 ~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~ 233 (284)
+|++++|+|+.+ |+++++++++++|.+.++ ++|++.+++++.. ++.+ ..+++|++||++|+ ...++++++
T Consensus 171 vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~ 249 (348)
T PLN03154 171 VGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMK 249 (348)
T ss_pred HHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhc
Confidence 999999999996 999999999999999987 7999999987642 3322 14579999999985 578999999
Q ss_pred cCCEEEEEcCCCCCC--------c--------eeEEE--ec-----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 234 EGGRVVSIIGSVTPP--------A--------SSFVL--TS-----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 234 ~~G~~v~~g~~~~~~--------~--------~~~~~--~~-----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++|+++.+|...... . +.+.. .. ..+.++++++++++|+|++.++++|||
T Consensus 250 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L 322 (348)
T PLN03154 250 IHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGL 322 (348)
T ss_pred cCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCH
Confidence 999999998653110 0 11111 00 135688899999999999999888886
No 43
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.7e-33 Score=247.01 Aligned_cols=261 Identities=28% Similarity=0.355 Sum_probs=207.9
Q ss_pred CeEEEEccc--CCC-ccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273 1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (284)
Q Consensus 1 m~a~~~~~~--g~~-~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 77 (284)
||++++..+ |.+ .+.++++ +.+.|+|++|||+|||.++++|+.|.....+ ..+.|.++|+|++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES--- 73 (329)
T ss_pred ceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec---
Confidence 899999983 443 2568998 8899999999999999999999987542211 124578999999999984
Q ss_pred CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecC---ceeeCCCCCC-----HHhhhcccchHHHHHHHH-Hhccc
Q 023273 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN---LLALKPKNLS-----FVEAASLPLATETAYEGL-ERSAF 148 (284)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al-~~~~~ 148 (284)
.+++|++||||++. ++|++|++++.+ .++++|++++ ....++++++++|||+++ ...++
T Consensus 74 ~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 141 (329)
T cd08294 74 KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP 141 (329)
T ss_pred CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC
Confidence 45679999999873 478999999999 9999999987 233346788999999998 57889
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g 223 (284)
++|++|+|+|++|++|.+++++|+.+ |++++++++++++.+.++++|++++++++..++.+ ..+++|++||++|
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 99999999999999999999999995 99999999999999999999999999887554332 1467999999998
Q ss_pred C--cHHHHHhhccCCEEEEEcCCCC---C-----C---------ceeEEE---ec----cHHHHHHHHHHHHCCCeeEee
Q 023273 224 Q--CDKALKAVKEGGRVVSIIGSVT---P-----P---------ASSFVL---TS----DGSILEKLNPYFESGKVKAII 277 (284)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g~~~~---~-----~---------~~~~~~---~~----~~~~~~~~~~~~~~g~i~~~i 277 (284)
+ ...++++++++|+++.+|.... + . .+++.. .. ..+.++++++++++|.+++.+
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 300 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE 300 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 6 4789999999999999874211 0 0 011111 01 124577899999999998876
Q ss_pred cccccC
Q 023273 278 DPKGLL 283 (284)
Q Consensus 278 ~~~~~~ 283 (284)
..+|||
T Consensus 301 ~~~~~l 306 (329)
T cd08294 301 HVTEGF 306 (329)
T ss_pred ccccCH
Confidence 666764
No 44
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.3e-33 Score=247.26 Aligned_cols=271 Identities=32% Similarity=0.474 Sum_probs=220.1
Q ss_pred eEEEEccc---CCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273 2 KAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 2 ~a~~~~~~---g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 78 (284)
||+++..+ +.+ +.+++. +.|.|+|+++||+|++.++++|++|...+.|..+ ...+|.++|+|++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~ 76 (336)
T TIGR02817 1 KAVGYKKPLPITDP-DALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDE 76 (336)
T ss_pred CceeeccccCCCCc-ccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCC
Confidence 67888887 665 668888 7899999999999999999999999988877543 2345778999999999999999
Q ss_pred CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCC-----CC
Q 023273 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK 152 (284)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~ 152 (284)
++.|++||+|++... ....|+|++|+.++.+.++++|+++++++++.+++++.|||+++ ...++.+ |+
T Consensus 77 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 150 (336)
T TIGR02817 77 VTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR 150 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 999999999988531 12258999999999999999999999999999999999999998 5677776 99
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-CCcccEEEeCCCC---
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFDVVFDAVGQ--- 224 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-~~~~d~vid~~g~--- 224 (284)
+|+|+|++|.+|++++++|+.+.|+++++++.++++.+.++++|.+++++++. .+.. . .+++|+++|++++
T Consensus 151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~ 229 (336)
T TIGR02817 151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQH 229 (336)
T ss_pred EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHH
Confidence 99999999999999999999833899999999999999999999988887543 2211 1 3579999999753
Q ss_pred cHHHHHhhccCCEEEEEcCCCC------C-CceeEE---Ee--c---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 225 CDKALKAVKEGGRVVSIIGSVT------P-PASSFV---LT--S---------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 225 ~~~~~~~l~~~G~~v~~g~~~~------~-~~~~~~---~~--~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
...++++++++|+++.++.... . ....+. +. . ..+.++++++++.+|.+++.+++++++
T Consensus 230 ~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 309 (336)
T TIGR02817 230 FKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGT 309 (336)
T ss_pred HHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCC
Confidence 5889999999999998864321 0 112111 11 0 014688899999999999887777653
No 45
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=9.8e-33 Score=244.48 Aligned_cols=274 Identities=27% Similarity=0.341 Sum_probs=217.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++++++.. ..++ +.|.|+|.++|++|++.++++|++|++.+.|.++. ..|.++|||++|+|+++|+++.
T Consensus 1 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~ 73 (338)
T PRK09422 1 MKAAVVNKDHTG---DVVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVT 73 (338)
T ss_pred CeEEEecCCCCC---ceEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCc
Confidence 999999998876 3377 78999999999999999999999999998886532 2367899999999999999999
Q ss_pred CCCCCCEEEEecC-----c--------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDIN-----E--------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~~-----~--------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
.|++||+|++.+. . ....+...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~ 153 (338)
T PRK09422 74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK 153 (338)
T ss_pred cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence 9999999987211 0 00011223699999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-cccc----cCCCccc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE----DLPEKFD 216 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~----~~~~~~d 216 (284)
++...++++|++|+|+| +|++|++++++|+.+.|.+++++++++++.+.++++|.+.+++++. ..+. ...+++|
T Consensus 154 ~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d 232 (338)
T PRK09422 154 AIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAH 232 (338)
T ss_pred HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCc
Confidence 99878899999999999 7999999999999733889999999999999999999988888743 2211 1234789
Q ss_pred EEEeCCC-C--cHHHHHhhccCCEEEEEcCCCCCCc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeecccc
Q 023273 217 VVFDAVG-Q--CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPKG 281 (284)
Q Consensus 217 ~vid~~g-~--~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~ 281 (284)
+++.+.+ . ...++++++++|+++.+|....... ..+. .....++++++++++++|.+.+.+++ +
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~-~ 311 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQL-R 311 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEE-E
Confidence 5554443 3 5889999999999999986532111 1111 11246789999999999998776653 4
Q ss_pred cC
Q 023273 282 LL 283 (284)
Q Consensus 282 ~~ 283 (284)
++
T Consensus 312 ~~ 313 (338)
T PRK09422 312 PL 313 (338)
T ss_pred cH
Confidence 43
No 46
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.7e-33 Score=245.40 Aligned_cols=248 Identities=27% Similarity=0.363 Sum_probs=201.0
Q ss_pred cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecC
Q 023273 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93 (284)
Q Consensus 14 ~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 93 (284)
+.++++ +.+.|+|++|||+|||.++++|+.+. .|.++. ...|.++|.|++|+|+++|+ .|++||||+++
T Consensus 17 ~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~--~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 17 SDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL--KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCcC--CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 568888 78999999999999999999999654 343321 13467999999999999774 59999999884
Q ss_pred ccccCCCCCCCceeeEEeeecCceeeC----CCCCCHHhh-hcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHH
Q 023273 94 EKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167 (284)
Q Consensus 94 ~~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a 167 (284)
++|++|++++.+.+.++ |++++++++ +++++++.|||+++ +..++++|++|+|+|++|++|+++
T Consensus 86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a 155 (325)
T TIGR02825 86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 155 (325)
T ss_pred ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence 36899999999888777 899999887 67899999999998 678999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc-cccc-----CCCcccEEEeCCCC--cHHHHHhhccCCEEE
Q 023273 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239 (284)
Q Consensus 168 ~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-----~~~~~d~vid~~g~--~~~~~~~l~~~G~~v 239 (284)
+|+|+.. |++++++++++++.+.++++|++.+++++.. .+.+ .++++|++||++|+ ...++++++++|+++
T Consensus 156 iqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv 234 (325)
T TIGR02825 156 GQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIA 234 (325)
T ss_pred HHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence 9999995 9999999999999999999999999987653 3322 13579999999985 488999999999999
Q ss_pred EEcCCCC-------CC----------ceeEEE-e--c-----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 240 SIIGSVT-------PP----------ASSFVL-T--S-----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 240 ~~g~~~~-------~~----------~~~~~~-~--~-----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
.+|.... +. .+++.. . . ..+.++++++++++|++++.+..+|||
T Consensus 235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 303 (325)
T TIGR02825 235 ICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGF 303 (325)
T ss_pred EecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccH
Confidence 9875321 10 011111 0 1 135788999999999999887777775
No 47
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.7e-32 Score=243.37 Aligned_cols=276 Identities=29% Similarity=0.399 Sum_probs=223.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++ . ..++++ +.+.|.|.++|++|++.++++|++|...+.|.++.. .+.|..+|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~ 76 (341)
T cd08297 1 MKAAVVEEFG-E-KPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVS 76 (341)
T ss_pred CceEEeeccC-C-CCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCC
Confidence 9999999887 2 347888 888899999999999999999999999888876422 34466789999999999999999
Q ss_pred CCCCCCEEEEec-----Ccc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDI-----NEK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~-----~~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
.+++||+|++.+ +.+ ...+....|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~ 156 (341)
T cd08297 77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156 (341)
T ss_pred CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence 999999998752 100 0011123689999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKF 215 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~ 215 (284)
++...+++++++|+|+|+++.+|++++++|+++ |.+++++++++++.+.++++|.+.+++++..++.+ . .+++
T Consensus 157 ~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v 235 (341)
T cd08297 157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235 (341)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence 997678999999999998888999999999996 99999999999999999999988888876543222 1 4679
Q ss_pred cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-c----------eeEEE--eccHHHHHHHHHHHHCCCeeEeecc
Q 023273 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-A----------SSFVL--TSDGSILEKLNPYFESGKVKAIIDP 279 (284)
Q Consensus 216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-~----------~~~~~--~~~~~~~~~~~~~~~~g~i~~~i~~ 279 (284)
|++||+.++ ...++++++++|+++.+|...... . ..+.. ....+++++++++++++.+++.+ +
T Consensus 236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 314 (341)
T cd08297 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPHI-Q 314 (341)
T ss_pred CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCccee-E
Confidence 999997763 478899999999999998653211 1 11111 12368899999999999988755 4
Q ss_pred ccc
Q 023273 280 KGL 282 (284)
Q Consensus 280 ~~~ 282 (284)
+|+
T Consensus 315 ~~~ 317 (341)
T cd08297 315 VVP 317 (341)
T ss_pred EEc
Confidence 454
No 48
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.2e-33 Score=250.28 Aligned_cols=274 Identities=26% Similarity=0.330 Sum_probs=218.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++.+++.. ++++ +.+.|++.++||+|++.++++|++|++...|.++ ...|.++|||++|+|+++|+++.
T Consensus 3 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 75 (365)
T cd08278 3 TTAAVVREPGGP---FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT 75 (365)
T ss_pred cEEeeeccCCCc---ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence 899999987765 7888 7888999999999999999999999999988764 23578899999999999999999
Q ss_pred CCCCCCEEEEecCccc------cC--------------C--------------------CCCCCceeeEEeeecCceeeC
Q 023273 81 KFKVGDEVYGDINEKA------LD--------------H--------------------PKRNGSLAEYTAVEENLLALK 120 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~------~~--------------~--------------------~~~~g~~~~~~~~~~~~~~~i 120 (284)
+|++||+|++....+. .. + ....|+|++|+.++.+.++++
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 9999999986321000 00 0 112589999999999999999
Q ss_pred CCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (284)
Q Consensus 121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (284)
|++++.++++.+++++.||+.++ ....++++++|+|+| +|.+|++++++|+++ |. .+++++.+++|.+.++++|++
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~ 233 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT 233 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence 99999999999999999999987 567889999999997 699999999999996 88 588888899999999999998
Q ss_pred EEeeCCCccccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC--C----------CceeEEEe---
Q 023273 199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--P----------PASSFVLT--- 255 (284)
Q Consensus 199 ~~~~~~~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~--~----------~~~~~~~~--- 255 (284)
.+++++...+.+ ..+++|+++||+|+ ...++++++++|+++.+|.... . ....+...
T Consensus 234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (365)
T cd08278 234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG 313 (365)
T ss_pred EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence 888876543221 14689999999984 4889999999999999986521 1 11122111
Q ss_pred --ccHHHHHHHHHHHHCCCeeE-eecccccC
Q 023273 256 --SDGSILEKLNPYFESGKVKA-IIDPKGLL 283 (284)
Q Consensus 256 --~~~~~~~~~~~~~~~g~i~~-~i~~~~~~ 283 (284)
...+.++++++++++|.+++ .+.+.|||
T Consensus 314 ~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l 344 (365)
T cd08278 314 DSVPQEFIPRLIELYRQGKFPFDKLVTFYPF 344 (365)
T ss_pred CcChHHHHHHHHHHHHcCCCChHHheEEecH
Confidence 11456788999999999854 23345553
No 49
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=7.3e-33 Score=245.59 Aligned_cols=271 Identities=28% Similarity=0.382 Sum_probs=219.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCC-CeEEEEEeEeecCHHHHHHHcCCCCCCCC---CCCcccccceeEEEEEeC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLGAFSATDS---PLPTIPGYDVAGVVEKVG 76 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~-~ev~V~v~~~~i~~~d~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG 76 (284)
|||+++..++.+.+.+.++ +.|.|+|.+ +||+|++.++++|++|...+.|.++.... ..|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG 79 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence 9999999998764457888 788888887 99999999999999999998886542211 156789999999999999
Q ss_pred CCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEE
Q 023273 77 SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSIL 155 (284)
Q Consensus 77 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vl 155 (284)
++++.|++||+|++... ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++. ..++.++++|+
T Consensus 80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 99999999999998642 2589999999999999999999999999999999999999984 57889999999
Q ss_pred EEcCCchHHHHHHHHHHHhcCCeEEEEeCCh----hhHHHHHHcCCcEEeeCCCc---cccc-----CCCcccEEEeCCC
Q 023273 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLRSLGADLAIDYTKE---NIED-----LPEKFDVVFDAVG 223 (284)
Q Consensus 156 I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~-----~~~~~d~vid~~g 223 (284)
|+|++|++|++++++|++. |.+++++..++ ++.+.++++|.+.+++++.. .+.. ..+++|++|||+|
T Consensus 152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g 230 (341)
T cd08290 152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG 230 (341)
T ss_pred EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence 9998999999999999996 99998888765 66788888999888876543 2211 1227999999998
Q ss_pred C--cHHHHHhhccCCEEEEEcCCCC-C----------CceeEEEec--------c----HHHHHHHHHHHHCCCeeEeec
Q 023273 224 Q--CDKALKAVKEGGRVVSIIGSVT-P----------PASSFVLTS--------D----GSILEKLNPYFESGKVKAIID 278 (284)
Q Consensus 224 ~--~~~~~~~l~~~G~~v~~g~~~~-~----------~~~~~~~~~--------~----~~~~~~~~~~~~~g~i~~~i~ 278 (284)
+ ....+++++++|+++.+|.... + ....+.... . ...++++++++.+|.+++.+.
T Consensus 231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (341)
T cd08290 231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPV 310 (341)
T ss_pred cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcc
Confidence 6 4678899999999999985421 1 111111110 0 125888999999999988766
Q ss_pred ccc
Q 023273 279 PKG 281 (284)
Q Consensus 279 ~~~ 281 (284)
+++
T Consensus 311 ~~~ 313 (341)
T cd08290 311 EKV 313 (341)
T ss_pred ccc
Confidence 555
No 50
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=8.4e-33 Score=246.20 Aligned_cols=277 Identities=26% Similarity=0.334 Sum_probs=221.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC----------CCCCCCcccccceeE
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA----------TDSPLPTIPGYDVAG 70 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~----------~~~~~p~~~G~e~~G 70 (284)
|||+++..++.+ ++++ +.|.|++.++||+|++.++++|++|++.+.|.++. ...+.|.++|||++|
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G 76 (350)
T cd08240 1 MKAAAVVEPGKP---LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG 76 (350)
T ss_pred CeeEEeccCCCC---ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeE
Confidence 999999988876 7888 88999999999999999999999999998876531 122346789999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEecCcccc------------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcc
Q 023273 71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL 132 (284)
Q Consensus 71 ~V~~vG~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 132 (284)
+|+++|++++++++||+|++++..... .+....|+|++|+.++.+.++++|+++++.+++.+
T Consensus 77 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l 156 (350)
T cd08240 77 EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATL 156 (350)
T ss_pred EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehh
Confidence 999999999999999999886311000 00114689999999999999999999999999999
Q ss_pred cchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc
Q 023273 133 PLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED 210 (284)
Q Consensus 133 ~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 210 (284)
.+.+.|||+++.. ....++++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|.+.+++.+...+..
T Consensus 157 ~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 234 (350)
T cd08240 157 ACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK 234 (350)
T ss_pred hchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence 9999999999954 4556899999996 799999999999996 88 688888899999999999988888765433221
Q ss_pred -----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEE--EeccHHHHHHHHHHHHC
Q 023273 211 -----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFES 270 (284)
Q Consensus 211 -----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~ 270 (284)
..+++|++||++|. ...++++|+++|+++.+|...... ...+. .....+++..+++++++
T Consensus 235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~ 314 (350)
T cd08240 235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA 314 (350)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence 13379999999984 488999999999999987654221 11111 12345789999999999
Q ss_pred CCeeEeecccccC
Q 023273 271 GKVKAIIDPKGLL 283 (284)
Q Consensus 271 g~i~~~i~~~~~~ 283 (284)
|.+++.+.++|++
T Consensus 315 ~~i~~~~~~~~~~ 327 (350)
T cd08240 315 GKLKPIPLTERPL 327 (350)
T ss_pred CCCccceeeEEcH
Confidence 9998766666664
No 51
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6.9e-33 Score=248.73 Aligned_cols=274 Identities=25% Similarity=0.308 Sum_probs=215.3
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.. ++++ +.|.|+|.++||+|++.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++
T Consensus 8 ~~a~~~~~~~~~---~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 8 CKAAVLWEPKKP---FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred eEEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence 788888877765 7888 8899999999999999999999999999988752 34678999999999999999999
Q ss_pred CCCCCCEEEEecCc-------ccc--------------------------------CCCCCCCceeeEEeeecCceeeCC
Q 023273 81 KFKVGDEVYGDINE-------KAL--------------------------------DHPKRNGSLAEYTAVEENLLALKP 121 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~-------~~~--------------------------------~~~~~~g~~~~~~~~~~~~~~~ip 121 (284)
.+++||+|++.... +.. ......|+|++|++++.+.++++|
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP 160 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID 160 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence 99999999876210 000 000125899999999999999999
Q ss_pred CCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcE
Q 023273 122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL 199 (284)
Q Consensus 122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~ 199 (284)
+++++++++++++++.|||+++ ...+++++++|+|+| +|++|++++++|+.+ |. +|+++++++++.+.++++|+++
T Consensus 161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence 9999999999999999999986 678899999999997 799999999999996 88 7999999999999999999988
Q ss_pred EeeCCCcc--ccc-----CCCcccEEEeCCCCc---HHHHHh-hccCCEEEEEcCCCCCCcee-----------EE---E
Q 023273 200 AIDYTKEN--IED-----LPEKFDVVFDAVGQC---DKALKA-VKEGGRVVSIIGSVTPPASS-----------FV---L 254 (284)
Q Consensus 200 ~~~~~~~~--~~~-----~~~~~d~vid~~g~~---~~~~~~-l~~~G~~v~~g~~~~~~~~~-----------~~---~ 254 (284)
+++..+.. ... ..+++|++||++|.. ..++.. ++++|+++.+|....+..+. +. .
T Consensus 239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 318 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF 318 (373)
T ss_pred EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence 88765322 111 135799999999852 444554 46799999998653211111 11 1
Q ss_pred ec--cHHHHHHHHHHHHCCC--eeEeecccccC
Q 023273 255 TS--DGSILEKLNPYFESGK--VKAIIDPKGLL 283 (284)
Q Consensus 255 ~~--~~~~~~~~~~~~~~g~--i~~~i~~~~~~ 283 (284)
.. ..+++.++++++.++. +++.++++|||
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 351 (373)
T cd08299 319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF 351 (373)
T ss_pred cCCccHHHHHHHHHHHHcCCCCchhheeeeecH
Confidence 11 2357777888777765 44567888875
No 52
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.5e-32 Score=240.17 Aligned_cols=273 Identities=30% Similarity=0.404 Sum_probs=223.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
|||+++.+++.+ ..+++. +.+.|.+.++||+|++.++++|++|++...|..+.. ....|.++|||++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v 78 (324)
T cd08244 1 MRAIRLHEFGPP-EVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGV 78 (324)
T ss_pred CeEEEEcCCCCc-cceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCC
Confidence 999999887765 557777 666677899999999999999999999888764321 23456789999999999999999
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcC
Q 023273 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga 159 (284)
..+++||+|++... ...|+|++|+.++.+.++++|+++++.+++.+++.+.|||..+...+++++++|+|+|+
T Consensus 79 ~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~ 151 (324)
T cd08244 79 DPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAA 151 (324)
T ss_pred CCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 99999999999752 23689999999999999999999999999999999999976667889999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|.+|.+++++|+.+ |++++++++++++.+.++++|.+.+++.+...+.+ . ++++|+++|++|+ ...++++
T Consensus 152 ~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~ 230 (324)
T cd08244 152 AGGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALAL 230 (324)
T ss_pred CchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHH
Confidence 999999999999996 99999999999999999999988888765433211 1 3579999999986 4788999
Q ss_pred hccCCEEEEEcCCCCC-Cc----------eeEE---Ee-----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVTP-PA----------SSFV---LT-----SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~-~~----------~~~~---~~-----~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.+|..... .. ..+. .. ...+.+++++++++++.+++.++++||+
T Consensus 231 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 301 (324)
T cd08244 231 LAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPL 301 (324)
T ss_pred hccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeH
Confidence 9999999999865321 11 1111 00 1146788899999999998878777764
No 53
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.1e-33 Score=244.64 Aligned_cols=274 Identities=31% Similarity=0.468 Sum_probs=223.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||+++++.+++. ++++ +.|.|++.+||++|++.++++|++|++...|.++. .++|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~g~~~~ 74 (334)
T PRK13771 1 MKAVILPGFKQG---YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKYPVILGHEVVGTVEEVGENVK 74 (334)
T ss_pred CeeEEEcCCCCC---cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC--CCCCeeccccceEEEEEeCCCCc
Confidence 999999999875 7898 78999999999999999999999999988886542 34577899999999999999998
Q ss_pred CCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.+++||+|++..... ...+...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus 75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 899999999863100 00112236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD 220 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid 220 (284)
+...++.++++|+|+|++|.+|++++++|+.+ |.+++++++++++.+.++++ ++.+++.+. ..+... .++|++||
T Consensus 155 ~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld 231 (334)
T PRK13771 155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIE 231 (334)
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEE
Confidence 86558899999999998899999999999996 99999999999999888877 655555431 111222 37999999
Q ss_pred CCCC--cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ--CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
|+|+ ...++++|+++|+++.+|...... ...+. .....++++++++++++|.+++.+.++||+
T Consensus 232 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 310 (334)
T PRK13771 232 TVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEVSL 310 (334)
T ss_pred cCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeeeEcH
Confidence 9985 578999999999999998643211 11111 223578899999999999998888888775
No 54
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.9e-32 Score=237.05 Aligned_cols=261 Identities=33% Similarity=0.429 Sum_probs=214.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++...+ + ..++++ +.+.|.+.++|++|++.++++|++|.+...+. ..+.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~ 71 (305)
T cd08270 1 MRALVVDPDA-P-LRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGS 71 (305)
T ss_pred CeEEEEccCC-C-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCC
Confidence 8999998766 4 557888 78888899999999999999999999876532 2356799999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~ 160 (284)
.|++||+|++... .|+|++|+.++.+.++++|+++++.+++++++.+.|||+++......+|++++|+|+.
T Consensus 72 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~ 142 (305)
T cd08270 72 GPAVGARVVGLGA---------MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGAS 142 (305)
T ss_pred CCCCCCEEEEecC---------CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 9999999998642 5899999999999999999999999999999999999999865444569999999988
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC--cHHHHHhhccCCEE
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV 238 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~l~~~G~~ 238 (284)
|.+|.+++++|+.. |++++.+++++++.+.++++|.+..++.... + ..+++|+++|++|+ ...++++|+++|++
T Consensus 143 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~ 218 (305)
T cd08270 143 GGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-L--SGAPVDLVVDSVGGPQLARALELLAPGGTV 218 (305)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-c--cCCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence 99999999999995 9999999999999999999997655543221 1 12579999999985 58899999999999
Q ss_pred EEEcCCCCC-C------------ceeEE---Ee---ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 239 VSIIGSVTP-P------------ASSFV---LT---SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 239 v~~g~~~~~-~------------~~~~~---~~---~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+.+|..... . ...+. +. ...+.++.+++++++|++++.+.+++++
T Consensus 219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 282 (305)
T cd08270 219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSW 282 (305)
T ss_pred EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcH
Confidence 999854311 0 11111 11 1246788999999999999887777764
No 55
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.2e-32 Score=249.05 Aligned_cols=281 Identities=30% Similarity=0.419 Sum_probs=219.4
Q ss_pred CeEEEEc--ccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------C-CCCCCcccccceeE
Q 023273 1 MKAWVYK--EYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------T-DSPLPTIPGYDVAG 70 (284)
Q Consensus 1 m~a~~~~--~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~-~~~~p~~~G~e~~G 70 (284)
||++++. .+|.+...++++ +.|.|.++++||+|++.++++|++|++...|.... . ....+.++|||++|
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G 91 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG 91 (393)
T ss_pred hhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence 7888885 344431237888 78899999999999999999999999887664100 0 01123578999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEecCccc------------------cCC-CCCCCceeeEEeeecCceeeCCCCCCHHhhhc
Q 023273 71 VVEKVGSQVKKFKVGDEVYGDINEKA------------------LDH-PKRNGSLAEYTAVEENLLALKPKNLSFVEAAS 131 (284)
Q Consensus 71 ~V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 131 (284)
+|+++|++++.+++||+|++.+.... ..+ ...+|+|++|++++...++++|+++++++++.
T Consensus 92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~ 171 (393)
T cd08246 92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA 171 (393)
T ss_pred EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence 99999999999999999988742100 000 01359999999999999999999999999999
Q ss_pred ccchHHHHHHHHH-h--cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-
Q 023273 132 LPLATETAYEGLE-R--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN- 207 (284)
Q Consensus 132 ~~~~~~ta~~al~-~--~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~- 207 (284)
+++++.|||+++. . ++++++++|+|+|++|++|++++++|+.+ |+++++++.++++.+.++++|++.+++++.++
T Consensus 172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~ 250 (393)
T cd08246 172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH 250 (393)
T ss_pred hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence 9999999999984 3 68899999999998899999999999996 99999999999999999999998888864321
Q ss_pred ---------------------ccc----C--CC-cccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC-CCceeE----
Q 023273 208 ---------------------IED----L--PE-KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-PPASSF---- 252 (284)
Q Consensus 208 ---------------------~~~----~--~~-~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~~~~~---- 252 (284)
+.+ . .. ++|++||++|+ ...++++++++|+++.+|.... +..++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~ 330 (393)
T cd08246 251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW 330 (393)
T ss_pred ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence 101 1 23 79999999985 5789999999999999976432 111110
Q ss_pred --------EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 253 --------VLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 253 --------~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
......+++.+++++++++.+.+.++++||+
T Consensus 331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 369 (393)
T cd08246 331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSL 369 (393)
T ss_pred hheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeH
Confidence 0011345889999999999999888888875
No 56
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.3e-32 Score=241.09 Aligned_cols=270 Identities=29% Similarity=0.361 Sum_probs=221.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..+|.+ ..++++ +.+.|+|+++||+|++.++++|++|++...|.++. ...|..+|||++|+|+.+|++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 2 AKRIEFHKHGGP-EVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred ceEEEEeccCCh-hHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence 899999998887 678998 78899999999999999999999999988776532 23467899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
.+++||+|++.. ...|+|++|+.++.+.++++|+++++++++.+++.+.+||+++ ...++.+|++|+|+|+
T Consensus 78 ~~~~Gd~V~~~~--------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 78 HIKVGDRVVYAQ--------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred CCCCCCEEEECC--------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 999999998642 1258999999999999999999999999998888999999988 4578999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|.+|++++++|+.+ |++++.++.++++.+.++++|.+.+++.+...+.+. ++++|++|||+|+ ...++++
T Consensus 150 ~g~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~ 228 (327)
T PRK10754 150 AGGVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDC 228 (327)
T ss_pred CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHH
Confidence 999999999999996 999999999999999999999888887655433221 4579999999985 4788999
Q ss_pred hccCCEEEEEcCCCCC-C--ce--------eEEE-------ecc----HHHHHHHHHHHHCCCeeEe--ecccccC
Q 023273 232 VKEGGRVVSIIGSVTP-P--AS--------SFVL-------TSD----GSILEKLNPYFESGKVKAI--IDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~-~--~~--------~~~~-------~~~----~~~~~~~~~~~~~g~i~~~--i~~~~~~ 283 (284)
++++|+++.+|..... . .+ .+.. ..+ .+.++++++++++|.+++. +.++||+
T Consensus 229 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~ 304 (327)
T PRK10754 229 LQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPL 304 (327)
T ss_pred hccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcH
Confidence 9999999999854311 1 10 1100 011 2345678999999999864 5677774
No 57
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.1e-32 Score=245.46 Aligned_cols=275 Identities=22% Similarity=0.301 Sum_probs=215.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------CCCCCCcccccceeEEEE
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------TDSPLPTIPGYDVAGVVE 73 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~ 73 (284)
|||+++.++++ ++++ +.+.|++++++|+|++.++++|++|++.+.|.+.. ...+.|.++|||++|+|+
T Consensus 1 mka~~~~~~~~----~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~ 75 (350)
T cd08256 1 MRAVVCHGPQD----YRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV 75 (350)
T ss_pred CeeEEEecCCc----eEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEE
Confidence 99999987775 5898 88999999999999999999999999988875311 001457789999999999
Q ss_pred EeCCCCC--CCCCCCEEEEecCcccc------------------CCC--CCCCceeeEEeeecC-ceeeCCCCCCHHhhh
Q 023273 74 KVGSQVK--KFKVGDEVYGDINEKAL------------------DHP--KRNGSLAEYTAVEEN-LLALKPKNLSFVEAA 130 (284)
Q Consensus 74 ~vG~~~~--~~~~Gd~V~~~~~~~~~------------------~~~--~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa 130 (284)
++|++++ +|++||+|++.+..... .+. ...|+|++|+.++.+ .++++|+++++++++
T Consensus 76 ~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa 155 (350)
T cd08256 76 ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI 155 (350)
T ss_pred EeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence 9999998 89999999874210000 001 136899999999988 678999999998888
Q ss_pred cccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
.+ .++.|+|+++...++.++++|+|.| +|.+|.+++++|+.+ |++ ++++++++++.+.++++|++.+++.+...+.
T Consensus 156 ~~-~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 232 (350)
T cd08256 156 LI-EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVV 232 (350)
T ss_pred hh-hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHH
Confidence 88 8888999998778899999999955 799999999999997 765 6677788889998899999888877543322
Q ss_pred c----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCceeE-----------EE-eccHHHHHHHHHHH
Q 023273 210 D----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF-----------VL-TSDGSILEKLNPYF 268 (284)
Q Consensus 210 ~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~ 268 (284)
. . ..++|++||++|+ ...++++++++|+++.+|.......+.. .. ......++++++++
T Consensus 233 ~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 312 (350)
T cd08256 233 EKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLI 312 (350)
T ss_pred HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHH
Confidence 2 1 3479999999984 4778999999999999975432211111 00 11235688999999
Q ss_pred HCCCeeEe--ecccccC
Q 023273 269 ESGKVKAI--IDPKGLL 283 (284)
Q Consensus 269 ~~g~i~~~--i~~~~~~ 283 (284)
++|.+++. +.++||+
T Consensus 313 ~~g~l~~~~~~~~~~~l 329 (350)
T cd08256 313 ASGRLPTDGIVTHQFPL 329 (350)
T ss_pred HcCCCChhHheEEEeEH
Confidence 99999873 6777764
No 58
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.9e-32 Score=246.98 Aligned_cols=274 Identities=28% Similarity=0.345 Sum_probs=217.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
|||+++.+++. ++++ +.+.|.| .+++|+|++.++++|++|+..+.|.++. .++|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 1 MKALVWHGKGD----VRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CeeEEEecCCC----ceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCC
Confidence 99999986654 6888 7888888 4999999999999999999999897653 3457899999999999999999
Q ss_pred CCCCCCCEEEEecCcc---------------cc------------------CC-----CCCCCceeeEEeeecC--ceee
Q 023273 80 KKFKVGDEVYGDINEK---------------AL------------------DH-----PKRNGSLAEYTAVEEN--LLAL 119 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~---------------~~------------------~~-----~~~~g~~~~~~~~~~~--~~~~ 119 (284)
+++++||+|++.+... .. .+ ...+|+|++|++++.+ .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 9999999998864110 00 00 0136899999999987 8999
Q ss_pred CCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc
Q 023273 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD 198 (284)
Q Consensus 120 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~ 198 (284)
+|++++++++++++..++|||+++...++.++++|+|+| +|.+|.+++++|+.. |. ++++++.++++.+.+++++..
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~ 231 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGA 231 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999778899999999997 799999999999996 86 588999999999999988544
Q ss_pred EEeeCCCcc-ccc----C--CCcccEEEeCCCC------------------------cHHHHHhhccCCEEEEEcCCCC-
Q 023273 199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------------CDKALKAVKEGGRVVSIIGSVT- 246 (284)
Q Consensus 199 ~~~~~~~~~-~~~----~--~~~~d~vid~~g~------------------------~~~~~~~l~~~G~~v~~g~~~~- 246 (284)
.++++...+ +.. . .+++|++||++|+ ...++++++++|+++.+|....
T Consensus 232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~ 311 (386)
T cd08283 232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT 311 (386)
T ss_pred EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC
Confidence 567665432 221 1 3479999999863 3678999999999999986532
Q ss_pred CC----------ceeEEE--eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 247 PP----------ASSFVL--TSDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 247 ~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.. ...+.. ....+.++++++++.++++.+ .++++||+
T Consensus 312 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l 362 (386)
T cd08283 312 VNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL 362 (386)
T ss_pred cCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH
Confidence 11 111111 123567899999999999976 36666664
No 59
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.7e-32 Score=239.98 Aligned_cols=270 Identities=33% Similarity=0.488 Sum_probs=220.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.. ..+++. +.+.|++.++|++|++.++++|+.|.....|.++. ....|.++|||++|+|+++|++++
T Consensus 2 m~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 2 MRAVTLKGFGGV-DVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred cEEEEEEecCCC-cceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence 999999998876 557777 66777899999999999999999999988876532 223456899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga 159 (284)
++++||+|+++.. +|+|++|++++.+.++++|++++..+++.+++++.|||+++. ..++.++++|+|+|+
T Consensus 79 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga 149 (334)
T PTZ00354 79 RFKEGDRVMALLP---------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG 149 (334)
T ss_pred CCCCCCEEEEecC---------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998742 589999999999999999999999999999999999999984 578999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc-ccc----C--CCcccEEEeCCCC--cHHHHH
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED----L--PEKFDVVFDAVGQ--CDKALK 230 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~----~--~~~~d~vid~~g~--~~~~~~ 230 (284)
+|.+|++++++|+.+ |.++++++.++++.+.++++|.+.+++....+ +.. . .+++|++||+.|+ ...+++
T Consensus 150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 228 (334)
T PTZ00354 150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE 228 (334)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence 999999999999996 99988899999999999999988888765432 221 1 4579999999885 478999
Q ss_pred hhccCCEEEEEcCCCCCC-c-e----------eEEE---ec-c--------HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 231 AVKEGGRVVSIIGSVTPP-A-S----------SFVL---TS-D--------GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 231 ~l~~~G~~v~~g~~~~~~-~-~----------~~~~---~~-~--------~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++++|+++.++...... . + .+.. .. . .+.+++++++++++.+++.+.+.|++
T Consensus 229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 305 (334)
T PTZ00354 229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPL 305 (334)
T ss_pred HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcH
Confidence 999999999987543111 0 1 1110 00 0 13457888999999998877777764
No 60
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.7e-32 Score=242.72 Aligned_cols=274 Identities=43% Similarity=0.657 Sum_probs=219.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCC-------------CCCCCCccccc
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-------------TDSPLPTIPGY 66 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------------~~~~~p~~~G~ 66 (284)
|||+++.+++++.+.++++ +.+.|+| +++||+|++.++++|++|.+...|.... .....|.++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 79 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence 8999999888763457888 7888999 4999999999999999999988774210 02345789999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-h
Q 023273 67 DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-R 145 (284)
Q Consensus 67 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~ 145 (284)
|++|+|+.+|+++++|++||+|++.... ...|+|++|++++.+.++++|+++++++++.+++++.|||+++. .
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~ 153 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV 153 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence 9999999999999999999999986531 23689999999999999999999999999999999999999984 4
Q ss_pred cccC----CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc---CCCcccEE
Q 023273 146 SAFS----AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV 218 (284)
Q Consensus 146 ~~~~----~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d~v 218 (284)
..+. +|++|+|+|++|.+|++++++|+++ |++++++.++ ++.+.++++|.+.+++.....+.. ..+++|++
T Consensus 154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v 231 (350)
T cd08248 154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231 (350)
T ss_pred ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence 5554 4999999999999999999999996 9998887754 677788899988787765432221 13579999
Q ss_pred EeCCCC--cHHHHHhhccCCEEEEEcCCCCC--C-----------ceeE--------E---------EeccHHHHHHHHH
Q 023273 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----------ASSF--------V---------LTSDGSILEKLNP 266 (284)
Q Consensus 219 id~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----------~~~~--------~---------~~~~~~~~~~~~~ 266 (284)
||++|. ...++++++++|+++.++..... . .+.+ . .....+.+.++++
T Consensus 232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (350)
T cd08248 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK 311 (350)
T ss_pred EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence 999985 57899999999999998754210 0 0000 0 0113567899999
Q ss_pred HHHCCCeeEeecccccC
Q 023273 267 YFESGKVKAIIDPKGLL 283 (284)
Q Consensus 267 ~~~~g~i~~~i~~~~~~ 283 (284)
++++|.+++.++++||+
T Consensus 312 ~~~~g~~~~~~~~~~~~ 328 (350)
T cd08248 312 LVEDGKIKPVIDKVFPF 328 (350)
T ss_pred HHhCCCEecccceeecH
Confidence 99999999888888875
No 61
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=3.5e-32 Score=239.92 Aligned_cols=275 Identities=35% Similarity=0.465 Sum_probs=223.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.. +.++ +.|.|++.+++|+|++.++++|++|++...|.++. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~ 74 (332)
T cd08259 1 MKAAILHKPNKP---LQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVE 74 (332)
T ss_pred CeEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCc
Confidence 899999875444 7888 78999999999999999999999999998886642 24577899999999999999999
Q ss_pred CCCCCCEEEEecCcc------------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.+++||+|+++.... ...+....|+|++|++++.+.++++|+++++++++.+++++.|||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 999999999874210 00111236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD 220 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid 220 (284)
+...++.++++++|+|++|.+|++++++++.. |.+++++++++++.+.+++++.+.+++... ..+... .++|++++
T Consensus 155 l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~ 232 (332)
T cd08259 155 LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKL-GGADVVIE 232 (332)
T ss_pred HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhc-cCCCEEEE
Confidence 96688899999999999999999999999995 999999999989988888888777776543 111122 37999999
Q ss_pred CCCC--cHHHHHhhccCCEEEEEcCCCCC-C----------ceeE--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSF--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++|. ...++++++++|+++.++..... . ...+ ......++++++++++++|.+++.++++||+
T Consensus 233 ~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 310 (332)
T cd08259 233 LVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSL 310 (332)
T ss_pred CCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEEEcH
Confidence 9985 47899999999999998754311 0 1111 1123467899999999999999888888774
No 62
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.5e-32 Score=240.61 Aligned_cols=274 Identities=25% Similarity=0.330 Sum_probs=215.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCC---------CCCCCCCcccccceeEE
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS---------ATDSPLPTIPGYDVAGV 71 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---------~~~~~~p~~~G~e~~G~ 71 (284)
|||+++..+ . ++++ +.+.|+++++||+|++.++++|++|++...|... ......|.++|+|++|+
T Consensus 1 m~a~~~~~~--~---~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 74 (341)
T cd08262 1 MRAAVFRDG--P---LVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE 74 (341)
T ss_pred CceEEEeCC--c---eEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEE
Confidence 899999866 3 7888 8899999999999999999999999998877311 01123467899999999
Q ss_pred EEEeCCCCCC-CCCCCEEEEecCccccC--------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 72 VEKVGSQVKK-FKVGDEVYGDINEKALD--------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 72 V~~vG~~~~~-~~~Gd~V~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
|+++|+++++ |++||+|++.+...... .....|+|++|++++.+.++++|+++++++++ ++.++++||++
T Consensus 75 V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~ 153 (341)
T cd08262 75 VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA 153 (341)
T ss_pred EEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence 9999999987 99999999874211110 01136899999999999999999999988776 66788899998
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccc--------c-cCC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI--------E-DLP 212 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~-~~~ 212 (284)
+...+++++++|+|+| +|.+|.+++++|+.+ |++ +++++.++++.+.++++|.+++++++..+. . ...
T Consensus 154 ~~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 231 (341)
T cd08262 154 VRRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG 231 (341)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence 8788999999999997 699999999999996 876 556667889999999999888888654321 0 114
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC----------CceeE--EEeccHHHHHHHHHHHHCCCeeE--
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSF--VLTSDGSILEKLNPYFESGKVKA-- 275 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~g~i~~-- 275 (284)
+++|++||++|+ ...++++++++|+++.+|..... ...++ ......+++.++++++++|.+.+
T Consensus 232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 311 (341)
T cd08262 232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAP 311 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence 579999999885 37789999999999999865311 11222 22335568999999999999875
Q ss_pred eecccccC
Q 023273 276 IIDPKGLL 283 (284)
Q Consensus 276 ~i~~~~~~ 283 (284)
.|.++||+
T Consensus 312 ~i~~~~~l 319 (341)
T cd08262 312 MVTGTVGL 319 (341)
T ss_pred heEEEeeH
Confidence 45677664
No 63
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.3e-32 Score=242.90 Aligned_cols=273 Identities=28% Similarity=0.368 Sum_probs=219.2
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. +++. +.|.|.| .++||+|++.++++|++|++.+.|.++. .++|.++|+|++|+|+++|+++
T Consensus 1 ~ka~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 73 (347)
T cd05278 1 MKALVYLGPGK----IGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDV 73 (347)
T ss_pred CceEEEecCCc----eEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCc
Confidence 89999998776 5888 7888889 8999999999999999999999887653 3557899999999999999999
Q ss_pred CCCCCCCEEEEecCccc---------------c------CCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchH
Q 023273 80 KKFKVGDEVYGDINEKA---------------L------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT 136 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~---------------~------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~ 136 (284)
+++++||+|++.+.... . .+...+|+|++|++++.+ .++++|++++.++++.+++++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 99999999987421000 0 011236899999999987 899999999999999999999
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C
Q 023273 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L 211 (284)
Q Consensus 137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~ 211 (284)
.|||+++...+++++++|+|.| +|.+|.+++++|+.+ |. +++++++++++.+.++++|.+.+++++...+.. .
T Consensus 154 ~ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~ 231 (347)
T cd05278 154 PTGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231 (347)
T ss_pred hheeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence 9999998778899999999976 699999999999996 85 788888888899988999988888876544322 1
Q ss_pred --CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-----------ceeEEE--eccHHHHHHHHHHHHCCCe
Q 023273 212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL--TSDGSILEKLNPYFESGKV 273 (284)
Q Consensus 212 --~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~g~i 273 (284)
.+++|++||++|. ...++++|+++|+++.+|...... ...+.. ....+.++++++++++|.+
T Consensus 232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (347)
T cd05278 232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKI 311 (347)
T ss_pred cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCC
Confidence 3579999999875 478899999999999987543211 111111 1235789999999999998
Q ss_pred eEe--eccccc
Q 023273 274 KAI--IDPKGL 282 (284)
Q Consensus 274 ~~~--i~~~~~ 282 (284)
++. +...|+
T Consensus 312 ~~~~~~~~~~~ 322 (347)
T cd05278 312 DPSKLITHRFP 322 (347)
T ss_pred ChhHcEEEEec
Confidence 863 445554
No 64
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.1e-32 Score=245.77 Aligned_cols=281 Identities=31% Similarity=0.429 Sum_probs=220.3
Q ss_pred CeEEEEcc--cCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-------C-CCCCC-ccccccee
Q 023273 1 MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------T-DSPLP-TIPGYDVA 69 (284)
Q Consensus 1 m~a~~~~~--~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-------~-~~~~p-~~~G~e~~ 69 (284)
|||+++.. ++++.+.+++. +.|.|.|.++|++|++.++++|++|.+...+.... . +...| .++|||++
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 89999976 66653558888 88999999999999999999999998876553200 0 00123 37999999
Q ss_pred EEEEEeCCCCCCCCCCCEEEEecCcc-------c-----------c-CCCCCCCceeeEEeeecCceeeCCCCCCHHhhh
Q 023273 70 GVVEKVGSQVKKFKVGDEVYGDINEK-------A-----------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAA 130 (284)
Q Consensus 70 G~V~~vG~~~~~~~~Gd~V~~~~~~~-------~-----------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa 130 (284)
|+|+++|++++.+++||+|++.+... . . .....+|+|++|++++.+.++++|+++++++++
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa 166 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA 166 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence 99999999999999999998864200 0 0 001136899999999999999999999999999
Q ss_pred cccchHHHHHHHHH---hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273 131 SLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (284)
Q Consensus 131 ~~~~~~~ta~~al~---~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (284)
.+.+.+.|||+++. ..++.++++|+|+|++|.+|++++++|+.+ |+++++++.++++.+.++++|++.++|++.++
T Consensus 167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~ 245 (398)
T TIGR01751 167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG 245 (398)
T ss_pred hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence 99999999999984 377899999999998899999999999995 99999999999999999999999888865421
Q ss_pred ----------------------ccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Ccee-----
Q 023273 208 ----------------------IED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PASS----- 251 (284)
Q Consensus 208 ----------------------~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~~----- 251 (284)
+.+ . .+++|++|||+|. ...++++++++|+++.+|..... ..++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 325 (398)
T TIGR01751 246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW 325 (398)
T ss_pred hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence 000 0 2579999999985 57899999999999999865321 1111
Q ss_pred -----E--EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 252 -----F--VLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 252 -----~--~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+ .......++++++++++++.+.+.++++++|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l 364 (398)
T TIGR01751 326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPL 364 (398)
T ss_pred hcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcH
Confidence 0 1111234578899999999999888888764
No 65
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=8e-32 Score=237.71 Aligned_cols=267 Identities=28% Similarity=0.360 Sum_probs=218.1
Q ss_pred CeEEEEcccCC--CccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273 1 MKAWVYKEYGN--SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 1 m~a~~~~~~g~--~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 78 (284)
||++++..+++ + +.++++ +.+.|.|.++|++|++.++++|++|++...|.++.. ..+|.++|||++|+|+.+|++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~ 78 (329)
T cd08250 2 FRKLVVHRLSPNFR-EATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEG 78 (329)
T ss_pred ceEEEeccCCCCcc-cCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCC
Confidence 99999999887 5 568898 788888999999999999999999999888865322 346789999999999999999
Q ss_pred CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEE
Q 023273 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL 157 (284)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ 157 (284)
++++++||+|++.. .|+|++|+.++.+.++++|+.. .+++.++.++.|||+++ +..++.++++++|+
T Consensus 79 v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ 146 (329)
T cd08250 79 VTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVT 146 (329)
T ss_pred CCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 99999999999864 5899999999999999999973 46678889999999998 45789999999999
Q ss_pred cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHH
Q 023273 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALK 230 (284)
Q Consensus 158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~ 230 (284)
|++|.+|++++++|+.. |.+++++++++++.+.++++|.+.+++.....+.+ ..+++|++||++|+ ...+++
T Consensus 147 ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~ 225 (329)
T cd08250 147 AAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVD 225 (329)
T ss_pred eCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHH
Confidence 99999999999999995 99999999999999999999987777765433211 14579999999985 478899
Q ss_pred hhccCCEEEEEcCCCCC--------------------CceeEEEec-------cHHHHHHHHHHHHCCCeeEe--ecccc
Q 023273 231 AVKEGGRVVSIIGSVTP--------------------PASSFVLTS-------DGSILEKLNPYFESGKVKAI--IDPKG 281 (284)
Q Consensus 231 ~l~~~G~~v~~g~~~~~--------------------~~~~~~~~~-------~~~~~~~~~~~~~~g~i~~~--i~~~~ 281 (284)
+++++|+++.+|..... ....+.... ..+.++++++++++|.+++. +.+++
T Consensus 226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 305 (329)
T cd08250 226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFR 305 (329)
T ss_pred HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcccc
Confidence 99999999999754311 011111111 24567889999999999874 33445
Q ss_pred cC
Q 023273 282 LL 283 (284)
Q Consensus 282 ~~ 283 (284)
|+
T Consensus 306 ~~ 307 (329)
T cd08250 306 GL 307 (329)
T ss_pred CH
Confidence 53
No 66
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=5.9e-32 Score=239.60 Aligned_cols=273 Identities=26% Similarity=0.363 Sum_probs=221.8
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|+++.+..+.- ++++ +.+.|+|.++|++|++.++++|++|.+.+.|.++ ..++|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 1 KGYAARDASGK---LEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CceEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCcc
Confidence 56777777755 8898 8899999999999999999999999999988763 2345789999999999999999999
Q ss_pred CCCCCEEEEec-----Ccc----------cc-----------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccch
Q 023273 82 FKVGDEVYGDI-----NEK----------AL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135 (284)
Q Consensus 82 ~~~Gd~V~~~~-----~~~----------~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 135 (284)
|++||+|+..+ +++ .. .+....|+|++|+.++.+.++++|+++++++++.+.+.
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 99999997321 000 00 01123689999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc-ccCCCc
Q 023273 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK 214 (284)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~ 214 (284)
+.|||+++....++++++++|.| +|.+|++++++|+.+ |++++++++++++.+.++++|.+.+++.+..+. ....++
T Consensus 155 ~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 232 (337)
T cd05283 155 GITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS 232 (337)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence 99999999777789999999977 899999999999995 999999999999999999999888887654332 223578
Q ss_pred ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eE--EEeccHHHHHHHHHHHHCCCeeEeecc
Q 023273 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDP 279 (284)
Q Consensus 215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~g~i~~~i~~ 279 (284)
+|++|||+|. ...++++|+++|+++.+|.......+ .+ ......++++.+++++++|++++.+ +
T Consensus 233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~-~ 311 (337)
T cd05283 233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWV-E 311 (337)
T ss_pred ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccce-E
Confidence 9999999984 48899999999999999865422111 11 1123568899999999999998765 5
Q ss_pred cccC
Q 023273 280 KGLL 283 (284)
Q Consensus 280 ~~~~ 283 (284)
+||+
T Consensus 312 ~~~~ 315 (337)
T cd05283 312 VIPM 315 (337)
T ss_pred EEEH
Confidence 6664
No 67
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.3e-32 Score=240.57 Aligned_cols=274 Identities=24% Similarity=0.334 Sum_probs=218.3
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. ++++ +.+.|+| .++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v 73 (345)
T cd08286 1 MKALVYHGPGK----ISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAV 73 (345)
T ss_pred CceEEEecCCc----eeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCc
Confidence 89999998775 5888 7888886 8999999999999999999999887643 2347889999999999999999
Q ss_pred CCCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHHH
Q 023273 80 KKFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATET 138 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t 138 (284)
+.+++||+|++...... ..+....|+|++|+.++.+ .++++|++++..+++.+++.++|
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 99999999988642100 0011235899999999987 89999999999999999999999
Q ss_pred HHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (284)
Q Consensus 139 a~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~- 211 (284)
||.++ ...++.++++++|.| +|.+|.+++++|+.+ | .++++++.+++|.+.++++|++.+++++..++.. .
T Consensus 154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (345)
T cd08286 154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELT 231 (345)
T ss_pred HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHh
Confidence 99876 567889999999987 699999999999996 8 7888888888899999999998888876433221 1
Q ss_pred -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEEecc-HHHHHHHHHHHHCCCeeE-
Q 023273 212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLTSD-GSILEKLNPYFESGKVKA- 275 (284)
Q Consensus 212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~g~i~~- 275 (284)
.+++|++||++|. ...++++|+++|+++.+|....+. ...+..... .+.+.++++++++|.+++
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (345)
T cd08286 232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPS 311 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChH
Confidence 3579999999985 377789999999999998543211 112211112 267888999999999865
Q ss_pred -eecccccC
Q 023273 276 -IIDPKGLL 283 (284)
Q Consensus 276 -~i~~~~~~ 283 (284)
.++++||+
T Consensus 312 ~~~~~~~~l 320 (345)
T cd08286 312 KLVTHRFKL 320 (345)
T ss_pred HcEEeEeeH
Confidence 36777764
No 68
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4e-32 Score=243.18 Aligned_cols=273 Identities=28% Similarity=0.374 Sum_probs=218.6
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
||+++..++.. ++++ +.+.|++.+++++|++.++++|++|++.+.|.++ ..+|.++|||++|+|+++|++++.
T Consensus 2 ~a~~~~~~~~~---~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~ 74 (365)
T cd05279 2 KAAVLWEKGKP---LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT 74 (365)
T ss_pred ceeEEecCCCC---cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCccc
Confidence 68888887765 7888 8899999999999999999999999999888653 345688999999999999999999
Q ss_pred CCCCCEEEEecCcccc---------------------------------------CCCCCCCceeeEEeeecCceeeCCC
Q 023273 82 FKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKPK 122 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~ 122 (284)
+++||+|++.+..... .+....|+|++|+.++.+.++++|+
T Consensus 75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 154 (365)
T cd05279 75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP 154 (365)
T ss_pred CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence 9999999886321000 0001247999999999999999999
Q ss_pred CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEE
Q 023273 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (284)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~ 200 (284)
++++++++.+.+++.+||+++ ...++.+|++|+|+| +|++|++++++|+.+ |.+ ++++++++++.+.++++|.+++
T Consensus 155 ~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 155 DAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATEC 232 (365)
T ss_pred CCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCee
Confidence 999999999998999999987 568899999999997 799999999999996 876 6666779999999999999888
Q ss_pred eeCCCc--cccc-----CCCcccEEEeCCCC---cHHHHHhhc-cCCEEEEEcCCCCCCceeE---------EE------
Q 023273 201 IDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVK-EGGRVVSIIGSVTPPASSF---------VL------ 254 (284)
Q Consensus 201 ~~~~~~--~~~~-----~~~~~d~vid~~g~---~~~~~~~l~-~~G~~v~~g~~~~~~~~~~---------~~------ 254 (284)
++.+.. ++.+ ..+++|++||++|. ...++++++ ++|+++.+|.........+ .+
T Consensus 233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~ 312 (365)
T cd05279 233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG 312 (365)
T ss_pred cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence 877544 2211 24689999999985 478899999 9999999875431111111 00
Q ss_pred -eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 255 -TSDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 255 -~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
....+.+.++++++++|.+++ .++++|++
T Consensus 313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l 344 (365)
T cd05279 313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPF 344 (365)
T ss_pred CCchHhHHHHHHHHHHcCCcchhHheeeeecH
Confidence 024578999999999999875 47777764
No 69
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=8.2e-32 Score=241.40 Aligned_cols=274 Identities=33% Similarity=0.449 Sum_probs=220.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.. ++++ +.|.|.+.++||+|++.++++|++|+....|.++ ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~ 73 (367)
T cd08263 1 MKAAVLKGPNPP---LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVE 73 (367)
T ss_pred CeeEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCC
Confidence 999999988765 7888 7888989999999999999999999998888664 25578899999999999999998
Q ss_pred C---CCCCCEEEEecCc-------c-------ccCC--------------------------CCCCCceeeEEeeecCce
Q 023273 81 K---FKVGDEVYGDINE-------K-------ALDH--------------------------PKRNGSLAEYTAVEENLL 117 (284)
Q Consensus 81 ~---~~~Gd~V~~~~~~-------~-------~~~~--------------------------~~~~g~~~~~~~~~~~~~ 117 (284)
+ |++||+|++.+.. + .... ....|+|++|+.++.+.+
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (367)
T cd08263 74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL 153 (367)
T ss_pred CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence 8 9999999884210 0 0000 013689999999999999
Q ss_pred eeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHc
Q 023273 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSL 195 (284)
Q Consensus 118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~ 195 (284)
+++|+++++.+++.++++++|||+++ ....+.++++|+|+| +|.+|++++++|+.+ |.+ +++++.++++.+.++++
T Consensus 154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~ 231 (367)
T cd08263 154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKEL 231 (367)
T ss_pred EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999998 456778999999996 899999999999995 887 88888899999999999
Q ss_pred CCcEEeeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC--C----------ceeEEE
Q 023273 196 GADLAIDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--P----------ASSFVL 254 (284)
Q Consensus 196 g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~----------~~~~~~ 254 (284)
|.+.+++++...+.. . .+++|++||++++ ...++++|+++|+++.++..... . +..+..
T Consensus 232 g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (367)
T cd08263 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG 311 (367)
T ss_pred CCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence 998888876544321 1 4579999999885 37889999999999999764321 1 111111
Q ss_pred ---eccHHHHHHHHHHHHCCCeeEe--ecccccC
Q 023273 255 ---TSDGSILEKLNPYFESGKVKAI--IDPKGLL 283 (284)
Q Consensus 255 ---~~~~~~~~~~~~~~~~g~i~~~--i~~~~~~ 283 (284)
....+.+++++++++++.+++. ++++|++
T Consensus 312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~ 345 (367)
T cd08263 312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKL 345 (367)
T ss_pred cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH
Confidence 1124789999999999998863 6666654
No 70
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-31 Score=236.11 Aligned_cols=275 Identities=32% Similarity=0.443 Sum_probs=221.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++++ . +.+. +.+.|.+.+++|+|++.++++|++|.....|.++ ...+.|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~ 76 (338)
T cd08254 1 MKAWRFHKGSKG-L-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVT 76 (338)
T ss_pred CeeEEEecCCCC-c-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCc
Confidence 999999999987 3 6777 7788889999999999999999999999888764 2234577899999999999999999
Q ss_pred CCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.+++||+|++.+.. ....+....|+|++|+.++.+.++++|+++++.+++.++.++.|||++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 156 (338)
T cd08254 77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA 156 (338)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 99999999872210 001112236899999999999999999999999999999999999999
Q ss_pred HH-hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCccc
Q 023273 143 LE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFD 216 (284)
Q Consensus 143 l~-~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d 216 (284)
+. ..+++++++|+|.| +|.+|.+++++|+.+ |+++++++.++++.+.++++|.+.+++........ ..+++|
T Consensus 157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D 234 (338)
T cd08254 157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD 234 (338)
T ss_pred HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCce
Confidence 84 57799999999986 799999999999995 99999999999999999999988877765433221 246799
Q ss_pred EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCcee------------EEEeccHHHHHHHHHHHHCCCeeEeecccc
Q 023273 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS------------FVLTSDGSILEKLNPYFESGKVKAIIDPKG 281 (284)
Q Consensus 217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~ 281 (284)
+++||.|. ...++++|+++|+++.++.......++ .......+.++.+++++++|.|++. .+++
T Consensus 235 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-~~~~ 313 (338)
T cd08254 235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ-VETR 313 (338)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc-ceeE
Confidence 99999974 478999999999999997543211111 1112236789999999999998876 4555
Q ss_pred c
Q 023273 282 L 282 (284)
Q Consensus 282 ~ 282 (284)
+
T Consensus 314 ~ 314 (338)
T cd08254 314 P 314 (338)
T ss_pred c
Confidence 5
No 71
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=9.8e-32 Score=238.83 Aligned_cols=275 Identities=29% Similarity=0.431 Sum_probs=221.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.+ ++++ +.+.|.+.++|++|++.++++|++|+....|.++. ...|.++|+|++|+|+.+|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~ 74 (345)
T cd08260 1 MRAAVYEEFGEP---LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD--VTLPHVPGHEFAGVVVEVGEDVS 74 (345)
T ss_pred CeeEEEecCCCC---cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC--CCCCeeeccceeEEEEEECCCCc
Confidence 999999988876 7888 78889999999999999999999999988886542 34578899999999999999999
Q ss_pred CCCCCCEEEEecCc-c-----------------ccCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccchHHHHH
Q 023273 81 KFKVGDEVYGDINE-K-----------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATETAY 140 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~-~-----------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (284)
.|++||+|++.... + ...+...+|+|++|++++.+ .++++|+++++++++.++.+++|||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 154 (345)
T cd08260 75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF 154 (345)
T ss_pred cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence 99999999872100 0 00011236899999999975 8999999999999999999999999
Q ss_pred HHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc----C-CC
Q 023273 141 EGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L-PE 213 (284)
Q Consensus 141 ~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~----~-~~ 213 (284)
+++ ...++.++++|+|+| +|.+|++++++|+.. |.++++++.++++.+.++++|.+.+++.+. .++.+ . .+
T Consensus 155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 232 (345)
T cd08260 155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG 232 (345)
T ss_pred HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence 998 567889999999999 799999999999995 999999999999999999999988888765 33322 1 23
Q ss_pred cccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC---ce----------eEEE--eccHHHHHHHHHHHHCCCeeE
Q 023273 214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP---AS----------SFVL--TSDGSILEKLNPYFESGKVKA 275 (284)
Q Consensus 214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~---~~----------~~~~--~~~~~~~~~~~~~~~~g~i~~ 275 (284)
++|++||++|+ ....+++|+++|+++.+|...... .+ .+.. ....+.+++++++++++.+.+
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~ 312 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP 312 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence 79999999984 478899999999999998653211 11 1111 124578999999999999875
Q ss_pred e--ecccccC
Q 023273 276 I--IDPKGLL 283 (284)
Q Consensus 276 ~--i~~~~~~ 283 (284)
. +.+++++
T Consensus 313 ~~~~~~~~~~ 322 (345)
T cd08260 313 EPLVGRTISL 322 (345)
T ss_pred hhheeEEecH
Confidence 3 5666653
No 72
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=7.3e-32 Score=237.13 Aligned_cols=264 Identities=27% Similarity=0.365 Sum_probs=209.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..+++ ++++ +.+.|+++++||+|++.++++|++|.....|.++ .|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~-- 68 (319)
T cd08242 1 MKALVLDGGLD----LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA-- 68 (319)
T ss_pred CeeEEEeCCCc----EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC--
Confidence 89999997654 6998 8899999999999999999999999999888652 5678999999999999988
Q ss_pred CCCCCCEEEEecCc------------------cccCCC-CCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDINE------------------KALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
+++||+|...+.. ...... ..+|+|++|++++.+.++++|++++.++++.+ ....++|.
T Consensus 69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 6799999753211 000111 23689999999999999999999998877754 44556777
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeC
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~ 221 (284)
+++..+++++++|+|+| +|.+|.+++++|+.+ |.++++++.++++.+.++++|++.+++++.. ...+++|++||+
T Consensus 147 ~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~ 221 (319)
T cd08242 147 ILEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEA 221 (319)
T ss_pred HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEEC
Confidence 77788899999999997 799999999999996 9999999999999999999998877776432 224679999999
Q ss_pred CCC---cHHHHHhhccCCEEEEEcCCCCCCceeE--------E-EeccHHHHHHHHHHHHCCCe--eEeecccccC
Q 023273 222 VGQ---CDKALKAVKEGGRVVSIIGSVTPPASSF--------V-LTSDGSILEKLNPYFESGKV--KAIIDPKGLL 283 (284)
Q Consensus 222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~g~i--~~~i~~~~~~ 283 (284)
+|+ ...++++++++|+++..+.......++. . .......++++++++++|+| .+.++++||+
T Consensus 222 ~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 297 (319)
T cd08242 222 TGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPL 297 (319)
T ss_pred CCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeH
Confidence 985 4788999999999998765332211111 0 11112248889999999999 5668888875
No 73
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=9.8e-32 Score=240.54 Aligned_cols=274 Identities=28% Similarity=0.402 Sum_probs=220.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.+ ++++ +.+.|+++++||+|++.++++|++|+..+.|.++ ..+|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~ 73 (363)
T cd08279 1 MRAAVLHEVGKP---LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVT 73 (363)
T ss_pred CeEEEEecCCCC---ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCcc
Confidence 999999998766 7888 7889999999999999999999999998888654 34577899999999999999999
Q ss_pred CCCCCCEEEEecCc----cc----------cC------------------------CCCCCCceeeEEeeecCceeeCCC
Q 023273 81 KFKVGDEVYGDINE----KA----------LD------------------------HPKRNGSLAEYTAVEENLLALKPK 122 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~~----------~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~ 122 (284)
.+++||+|++.+.. +. .. .....|+|++|+.++.+.++++|+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~ 153 (363)
T cd08279 74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD 153 (363)
T ss_pred ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence 99999999984210 00 00 002358999999999999999999
Q ss_pred CCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEE
Q 023273 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA 200 (284)
Q Consensus 123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~ 200 (284)
++++++++.+++++.|||.++ ...++.++++|+|+| +|.+|.+++++|+.+ |.+ +++++.++++.+.++++|.+++
T Consensus 154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~v 231 (363)
T cd08279 154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHT 231 (363)
T ss_pred CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence 999999999999999999987 568899999999996 799999999999996 886 8888899999999999998888
Q ss_pred eeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeE---EEe-
Q 023273 201 IDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSF---VLT- 255 (284)
Q Consensus 201 ~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~---~~~- 255 (284)
++++...+.. . .+++|++||++++ ...++++|+++|+++.++...... ...+ .+.
T Consensus 232 v~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 232 VNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred eCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 8776533221 1 4679999999984 478899999999999987533110 1110 111
Q ss_pred -ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 256 -SDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 256 -~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
...+.+++++++++++.+++ .+.++|++
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~ 342 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSL 342 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcH
Confidence 23578999999999999876 36666653
No 74
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=4.7e-32 Score=240.43 Aligned_cols=273 Identities=35% Similarity=0.490 Sum_probs=217.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++ + ..++++ +.+.|+|+++||+|++.++++|++|+....+.+ ....|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~ 74 (339)
T cd08249 1 QKAAVLTGPG-G-GLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVT 74 (339)
T ss_pred CceEEeccCC-C-Cccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcC
Confidence 9999999996 3 457888 889999999999999999999999988765543 123467899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hccc----------C
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAF----------S 149 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~----------~ 149 (284)
.+++||+|++....... +...+|+|++|++++.+.++++|+++++.+++.+++.+.|||+++. ..++ .
T Consensus 75 ~~~~Gd~V~~~~~~~~~-~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~ 153 (339)
T cd08249 75 RFKVGDRVAGFVHGGNP-NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS 153 (339)
T ss_pred cCCCCCEEEEEeccccC-CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCC
Confidence 99999999987521100 1123689999999999999999999999999999999999999984 4433 7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~ 224 (284)
++++++|+|++|.+|++++++|+.+ |++++.++ ++++.+.++++|.+.++++....+.+ ..+++|++||++|+
T Consensus 154 ~~~~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~ 231 (339)
T cd08249 154 KGKPVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST 231 (339)
T ss_pred CCCEEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence 8999999999999999999999996 99998887 56888999999998888876544322 14679999999885
Q ss_pred ---cHHHHHhhcc--CCEEEEEcCCCCCC----ceeE---EEe-----------ccHHHHHHHHHHHHCCCeeEeecccc
Q 023273 225 ---CDKALKAVKE--GGRVVSIIGSVTPP----ASSF---VLT-----------SDGSILEKLNPYFESGKVKAIIDPKG 281 (284)
Q Consensus 225 ---~~~~~~~l~~--~G~~v~~g~~~~~~----~~~~---~~~-----------~~~~~~~~~~~~~~~g~i~~~i~~~~ 281 (284)
...+++++++ +|+++.++...... .... ... .....+++++++++++++.+....++
T Consensus 232 ~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 311 (339)
T cd08249 232 PESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVV 311 (339)
T ss_pred chHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceec
Confidence 4789999999 99999998654221 1111 110 12356788999999999987654555
Q ss_pred c
Q 023273 282 L 282 (284)
Q Consensus 282 ~ 282 (284)
+
T Consensus 312 ~ 312 (339)
T cd08249 312 E 312 (339)
T ss_pred C
Confidence 4
No 75
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.2e-31 Score=233.99 Aligned_cols=273 Identities=30% Similarity=0.354 Sum_probs=218.8
Q ss_pred CeEEEEcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++.+++.+. ..+++. +.+.|.+.++||+||+.++++|++|++.+.|.++. ...|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence 8999999888421 136777 67778899999999999999999999998887643 3457789999999999999999
Q ss_pred CCCCCCCEEEEecC-----cc--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273 80 KKFKVGDEVYGDIN-----EK--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~-----~~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (284)
+++++||+|++.+. ++ ...+...+|+|++|+.++.+.++++|+++++.+++.+++++.|||
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 99999999976321 00 001112368999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEe
Q 023273 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD 220 (284)
Q Consensus 141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid 220 (284)
+++..++++++++++|+| +|++|++++++++.. |.++++++.++++.+.++++|.+.+++.... ..+++|++++
T Consensus 158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~ 231 (329)
T cd08298 158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII 231 (329)
T ss_pred HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence 999888999999999997 899999999999995 8999999999999999999998777766432 2357999999
Q ss_pred CCCC---cHHHHHhhccCCEEEEEcCCCC-CCceeE-------E----EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ---CDKALKAVKEGGRVVSIIGSVT-PPASSF-------V----LTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-------~----~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++. .+.++++++++|+++.+|.... ...+++ . .....+.+++++++++++.+++. .++|++
T Consensus 232 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~~~ 308 (329)
T cd08298 232 FAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE-VETYPL 308 (329)
T ss_pred cCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce-EEEEeH
Confidence 8663 4889999999999998874321 111111 0 12345678999999999998874 466664
No 76
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.7e-31 Score=236.62 Aligned_cols=272 Identities=31% Similarity=0.426 Sum_probs=217.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||++++.++. +++. +.+.|++.++|++|++.++++|+.|+....|.++.. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~ 73 (337)
T cd08261 1 MKALVCEKPGR----LEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVA 73 (337)
T ss_pred CeEEEEeCCCc----eEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCC
Confidence 89999998764 5888 789999999999999999999999999888866432 4477899999999999999999
Q ss_pred CCCCCCEEEEecC-------ccccC-----------CCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDIN-------EKALD-----------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~-------~~~~~-----------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.|++||+|++... .+... +....|+|++|+.++.+ ++++|+++++++++++ ..+.+++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~ 151 (337)
T cd08261 74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA 151 (337)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence 9999999987421 00000 01136899999999999 9999999999888776 567788888
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCccc
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFD 216 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d 216 (284)
+...++.++++|||+| +|.+|.+++++|+.+ |.++++++.++++.+.+++++.++++++....+.. . .+++|
T Consensus 152 ~~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd 229 (337)
T cd08261 152 VRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD 229 (337)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence 8778899999999997 799999999999996 99999999999999999999998888876543222 1 35699
Q ss_pred EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE--eccHHHHHHHHHHHHCCCeeE--eecc
Q 023273 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKA--IIDP 279 (284)
Q Consensus 217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~i~~ 279 (284)
++||+.|+ ...++++|+++|+++.++....+. .+.+.. ....+.++++++++++|.+++ .+.+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~ 309 (337)
T cd08261 230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH 309 (337)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence 99999875 478899999999999987543221 111111 123568899999999999987 6666
Q ss_pred cccC
Q 023273 280 KGLL 283 (284)
Q Consensus 280 ~~~~ 283 (284)
++++
T Consensus 310 ~~~~ 313 (337)
T cd08261 310 RFPF 313 (337)
T ss_pred EeeH
Confidence 6653
No 77
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.8e-31 Score=235.61 Aligned_cols=272 Identities=29% Similarity=0.416 Sum_probs=216.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||+++++.++. +.++ +.+.|++.+++|+|++.++++|++|+....|.++ ....|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~----~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~ 73 (343)
T cd08235 1 MKAAVLHGPND----VRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVT 73 (343)
T ss_pred CeEEEEecCCc----eEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCC
Confidence 89999998775 5888 7888889999999999999999999998887653 223467899999999999999999
Q ss_pred CCCCCCEEEEecCcc-----------c-------cCCCCCCCceeeEEeeecCc-----eeeCCCCCCHHhhhcccchHH
Q 023273 81 KFKVGDEVYGDINEK-----------A-------LDHPKRNGSLAEYTAVEENL-----LALKPKNLSFVEAASLPLATE 137 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~-----------~-------~~~~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~ 137 (284)
.|++||+|++..... . ..+....|+|++|++++.+. ++++|+++++.+++.+ ..+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 999999999863200 0 00112469999999999988 9999999999888766 7888
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C-
Q 023273 138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L- 211 (284)
Q Consensus 138 ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~- 211 (284)
+||+++...++++|++|+|+| +|.+|.+++++|+.. |.+ +++++.++++.+.+++++.+.+++++...+.. .
T Consensus 153 ~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 230 (343)
T cd08235 153 CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230 (343)
T ss_pred HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence 999999766899999999997 799999999999995 888 88888899999988889988888776544322 1
Q ss_pred -CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC--Cc----------eeE--EEeccHHHHHHHHHHHHCCCe
Q 023273 212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--PA----------SSF--VLTSDGSILEKLNPYFESGKV 273 (284)
Q Consensus 212 -~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~~----------~~~--~~~~~~~~~~~~~~~~~~g~i 273 (284)
.+++|++||++++ ...++++|+++|+++.++..... .. +.+ ......+.+++++++++++.+
T Consensus 231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l 310 (343)
T cd08235 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI 310 (343)
T ss_pred CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence 3569999999884 47889999999999998764321 11 111 112345788999999999998
Q ss_pred eE--eeccccc
Q 023273 274 KA--IIDPKGL 282 (284)
Q Consensus 274 ~~--~i~~~~~ 282 (284)
++ .+.++|+
T Consensus 311 ~~~~~~~~~~~ 321 (343)
T cd08235 311 DVKDLITHRFP 321 (343)
T ss_pred ChHHheeeEee
Confidence 63 4555555
No 78
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2e-31 Score=236.68 Aligned_cols=271 Identities=29% Similarity=0.412 Sum_probs=216.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. ++++ +.+.|+|. ++||+|++.++++|++|+....|.++ ..+|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (344)
T cd08284 1 MKAVVFKGPGD----VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEV 72 (344)
T ss_pred CeeEEEecCCC----ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCc
Confidence 89999987653 6888 88989885 99999999999999999998888654 2346789999999999999999
Q ss_pred CCCCCCCEEEEecCcc----c---------------c---CCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhhcccch
Q 023273 80 KKFKVGDEVYGDINEK----A---------------L---DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLA 135 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~----~---------------~---~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~ 135 (284)
+++++||+|++.+... . . .....+|+|++|+.++.+ .++++|++++++++++++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 9999999999864100 0 0 001125899999999865 99999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----
Q 023273 136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---- 210 (284)
Q Consensus 136 ~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---- 210 (284)
++|||+++...+..++++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|.. .++.+..++..
T Consensus 153 ~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence 99999999778889999999997 899999999999995 86 788888888899988999865 45544332221
Q ss_pred C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC-----------CceeEE--EeccHHHHHHHHHHHHCCC
Q 023273 211 L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----------PASSFV--LTSDGSILEKLNPYFESGK 272 (284)
Q Consensus 211 ~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~g~ 272 (284)
. .+++|++||++|+ ...++++++++|+++.+|..... ....+. .....+.+++++++++++.
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR 309 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence 1 3579999999984 47889999999999999865411 122222 2235678999999999999
Q ss_pred eeE--eeccccc
Q 023273 273 VKA--IIDPKGL 282 (284)
Q Consensus 273 i~~--~i~~~~~ 282 (284)
+++ ++.++|+
T Consensus 310 i~~~~~~~~~~~ 321 (344)
T cd08284 310 LDLEFLIDHRMP 321 (344)
T ss_pred CChHHhEeeeec
Confidence 875 3566665
No 79
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.4e-31 Score=233.06 Aligned_cols=235 Identities=30% Similarity=0.378 Sum_probs=196.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++++ +.++++ +.|.|.|+++||+|++.++++|++|+..+.|.++. ...+|.++|||++|+|+++ +++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~ 75 (325)
T cd05280 1 FKALVVEEQDGG-VSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDP 75 (325)
T ss_pred CceEEEcccCCC-CcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCC
Confidence 999999999874 458998 88999999999999999999999999998887532 2345778999999999998 456
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh---cccC-CCCEEEE
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAFS-AGKSILV 156 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~~-~g~~vlI 156 (284)
.+++||+|++.... .+...+|+|++|+.++.+.++++|+++++.+++.+++.+.|+|.++.. .++. .+++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (325)
T cd05280 76 RFREGDEVLVTGYD---LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV 152 (325)
T ss_pred CCCCCCEEEEcccc---cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 89999999986421 112236899999999999999999999999999999999999998743 2335 3579999
Q ss_pred EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc--ccc--CCCcccEEEeCCCC--cHHHHH
Q 023273 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN--IED--LPEKFDVVFDAVGQ--CDKALK 230 (284)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~d~vid~~g~--~~~~~~ 230 (284)
+|++|.+|++++++|+.+ |+++++++.++++.+.++++|.+.+++.+... ... ..+++|++||++|+ ...+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~ 231 (325)
T cd05280 153 TGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLK 231 (325)
T ss_pred ECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHH
Confidence 998899999999999996 99999999999999999999998888765321 111 13579999999985 588999
Q ss_pred hhccCCEEEEEcCC
Q 023273 231 AVKEGGRVVSIIGS 244 (284)
Q Consensus 231 ~l~~~G~~v~~g~~ 244 (284)
+++++|+++.+|..
T Consensus 232 ~l~~~g~~v~~g~~ 245 (325)
T cd05280 232 QTKYGGVVASCGNA 245 (325)
T ss_pred hhcCCCEEEEEecC
Confidence 99999999999864
No 80
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.9e-31 Score=231.21 Aligned_cols=278 Identities=33% Similarity=0.433 Sum_probs=223.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++...+.. +.+++. +.+.|.++++|++|++.++++|++|++...|.++.. ...|.++|||++|+|+++|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~ 77 (336)
T cd08276 1 MKAWRLSGGGGL-DNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP-VKDPLIPLSDGAGEVVAVGEGVT 77 (336)
T ss_pred CeEEEEeccCCC-cceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC-CCCCcccccceeEEEEEeCCCCc
Confidence 999999987654 557887 677788899999999999999999999888765422 23577899999999999999999
Q ss_pred CCCCCCEEEEecCc------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-Hhcc
Q 023273 81 KFKVGDEVYGDINE------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSA 147 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~ 147 (284)
+|++||+|++.... ....+.+.+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ....
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 99999999986410 0011223468999999999999999999999999999999999999998 4578
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC-ccccc----C--CCcccEEEe
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED----L--PEKFDVVFD 220 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~----~--~~~~d~vid 220 (284)
+++|++|+|+| +|++|++++++|+++ |+++++++.++++.+.+++++.+.+++... ..+.. . .+++|++||
T Consensus 158 ~~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 235 (336)
T cd08276 158 LKPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE 235 (336)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence 99999999996 899999999999996 999999999999999998889888887654 32211 1 358999999
Q ss_pred CCCC--cHHHHHhhccCCEEEEEcCCCCC-----------CceeEE--EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++. ...++++++++|+++.+|....+ ....+. .....+.+++++++++++.+.+.+.+++++
T Consensus 236 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~ 313 (336)
T cd08276 236 VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPF 313 (336)
T ss_pred CCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeH
Confidence 9875 47899999999999999864321 111111 112467899999999999988776676653
No 81
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.8e-31 Score=235.90 Aligned_cols=273 Identities=25% Similarity=0.290 Sum_probs=212.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. +++. +.|.|+| +++||+|++.++++|++|+..+.|.++ ...|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v 72 (345)
T cd08287 1 MRATVIHGPGD----IRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEV 72 (345)
T ss_pred CceeEEecCCc----eeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCC
Confidence 89999987665 5888 7898986 899999999999999999998888654 2347889999999999999999
Q ss_pred CCCCCCCEEEE-ecCcc-----------------ccCCCCCCCceeeEEeeecC--ceeeCCCCCCHHhhh-----cccc
Q 023273 80 KKFKVGDEVYG-DINEK-----------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAA-----SLPL 134 (284)
Q Consensus 80 ~~~~~Gd~V~~-~~~~~-----------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~ 134 (284)
.++++||+|++ ....+ ...+...+|+|++|+.++.+ .++++|++++++.+. ++..
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 99999999987 22110 01112345999999999975 999999999872211 2235
Q ss_pred hHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---
Q 023273 135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED--- 210 (284)
Q Consensus 135 ~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 210 (284)
.+.|||+++...++.++++|+|.| +|.+|++++++|++. |.+ ++++++++++.+.++++|++.++++....+.+
T Consensus 153 ~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~ 230 (345)
T cd08287 153 VMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR 230 (345)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence 678899998778899999999977 899999999999996 886 67777788888888999998888876543222
Q ss_pred -C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE--eccHHHHHHHHHHHHCCC
Q 023273 211 -L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESGK 272 (284)
Q Consensus 211 -~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~g~ 272 (284)
. ..++|+++|++|+ ...++++++++|+++.++.+..+..+ .+.. ....+.+.++++++++|.
T Consensus 231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (345)
T cd08287 231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR 310 (345)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence 1 3579999999975 48899999999999998765422111 1111 123578999999999999
Q ss_pred eeE--eecccccC
Q 023273 273 VKA--IIDPKGLL 283 (284)
Q Consensus 273 i~~--~i~~~~~~ 283 (284)
+++ .+++++++
T Consensus 311 l~~~~~~~~~~~l 323 (345)
T cd08287 311 INPGRVFDLTLPL 323 (345)
T ss_pred CCHHHhEEeeecH
Confidence 886 35566653
No 82
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.2e-31 Score=239.31 Aligned_cols=272 Identities=26% Similarity=0.334 Sum_probs=213.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC-CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~-~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++. ++++ +.|.|++ .++|++|++.++++|++|++.+.|.++ ..+|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v 72 (375)
T cd08282 1 MKAVVYGGPGN----VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAV 72 (375)
T ss_pred CceEEEecCCc----eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCC
Confidence 89999987764 6888 7898986 799999999999999999999988764 3457899999999999999999
Q ss_pred CCCCCCCEEEEecC----cc---ccC---------------------CCCCCCceeeEEeeecC--ceeeCCCCCCHH--
Q 023273 80 KKFKVGDEVYGDIN----EK---ALD---------------------HPKRNGSLAEYTAVEEN--LLALKPKNLSFV-- 127 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~----~~---~~~---------------------~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~-- 127 (284)
+.+++||+|++... .+ ... ....+|+|++|+++|.+ .++++|++++++
T Consensus 73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 99999999987321 00 000 01125899999999976 899999999988
Q ss_pred -hhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCC
Q 023273 128 -EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK 205 (284)
Q Consensus 128 -~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 205 (284)
+++.++.+++|||+++...++.+|++|+|.| +|.+|++++++|+++ |. ++++++++++|.+.++++|+. .++++.
T Consensus 153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~ 229 (375)
T cd08282 153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSD 229 (375)
T ss_pred hheeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence 4677788899999999778899999999976 799999999999996 86 788888899999999999974 555543
Q ss_pred ccccc-----CCCcccEEEeCCCC--------------cHHHHHhhccCCEEEEEcCCCCC-------------CceeE-
Q 023273 206 ENIED-----LPEKFDVVFDAVGQ--------------CDKALKAVKEGGRVVSIIGSVTP-------------PASSF- 252 (284)
Q Consensus 206 ~~~~~-----~~~~~d~vid~~g~--------------~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~- 252 (284)
..+.. ..+++|++|||+|. ...++++++++|+++.+|..... ..+++
T Consensus 230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (375)
T cd08282 230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG 309 (375)
T ss_pred ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence 32211 13479999999874 36889999999999888754311 00110
Q ss_pred -------EE----eccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 253 -------VL----TSDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 253 -------~~----~~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.. ....+.++.++++++++.+++ .++++||+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l 353 (375)
T cd08282 310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL 353 (375)
T ss_pred HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH
Confidence 00 013467889999999999987 37888875
No 83
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.5e-31 Score=230.46 Aligned_cols=273 Identities=27% Similarity=0.360 Sum_probs=218.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++...+.. ..+++. +.+.|++.++|++|++.++++|++|+....|.++ ....|.++|||++|+|+++|+ .
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~ 74 (320)
T cd08243 1 MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--G 74 (320)
T ss_pred CeEEEEcCCCCc-cceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--C
Confidence 899999887765 456777 6677788999999999999999999998887653 234567899999999999995 5
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga 159 (284)
.+++||+|++...+. +....|+|++|+.++.+.++++|+++++.+++.+++++.|||+++. ..++.+|++|+|+|+
T Consensus 75 ~~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga 151 (320)
T cd08243 75 TFTPGQRVATAMGGM---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG 151 (320)
T ss_pred CCCCCCEEEEecCCC---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 799999999875321 1223589999999999999999999999999999999999999984 567899999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccCCCcccEEEeCCCC--cHHHHHhhcc
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQ--CDKALKAVKE 234 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~d~vid~~g~--~~~~~~~l~~ 234 (284)
+|.+|++++++|+++ |+++++++.++++.+.++++|.+.+++..... +...++++|++||++|+ ...++++|++
T Consensus 152 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~ 230 (320)
T cd08243 152 TSSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRP 230 (320)
T ss_pred CChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHHHHHHHHHhcc
Confidence 999999999999996 99999999999999999999987776542211 11124689999999986 4788999999
Q ss_pred CCEEEEEcCCCCC---------------CceeEEEe----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 235 GGRVVSIIGSVTP---------------PASSFVLT----SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 235 ~G~~v~~g~~~~~---------------~~~~~~~~----~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+|+++.+|..... ....+... ...+.++.++++++++.+++.+.++|++
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (320)
T cd08243 231 GGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTF 298 (320)
T ss_pred CCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcH
Confidence 9999998863211 01111111 1135688899999999998877777764
No 84
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.3e-31 Score=233.67 Aligned_cols=258 Identities=43% Similarity=0.605 Sum_probs=204.1
Q ss_pred eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCC--CCCCcccccceeEE---EEEeC-CCCCCCCCCCEEE
Q 023273 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGV---VEKVG-SQVKKFKVGDEVY 89 (284)
Q Consensus 16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~vG-~~~~~~~~Gd~V~ 89 (284)
+.+.++.+.|+|.+++++|++.++++|+.|+....|.++... ..+|.+++.++.|+ +...| ..+.....||++.
T Consensus 19 ~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~ 98 (347)
T KOG1198|consen 19 VLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV 98 (347)
T ss_pred eEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence 334337889999999999999999999999999988764332 25665555554444 44444 2234455666555
Q ss_pred EecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-Hhc------ccCCCCEEEEEcCCch
Q 023273 90 GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERS------AFSAGKSILVLGGAGG 162 (284)
Q Consensus 90 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~------~~~~g~~vlI~ga~g~ 162 (284)
... ..|+|++|.++|...++++|+++++.++|++|.++.|||.++ ... +.++|++|||+|++|+
T Consensus 99 ~~~---------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsgg 169 (347)
T KOG1198|consen 99 AFL---------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGG 169 (347)
T ss_pred ecc---------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcH
Confidence 543 379999999999999999999999999999999999999999 456 7999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhhccC
Q 023273 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEG 235 (284)
Q Consensus 163 ~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~ 235 (284)
+|.+++|+|++. ++..++++.++++.++++++|+++++|+++.++.+. .++||+||||.|+ ......++...
T Consensus 170 VG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~ 248 (347)
T KOG1198|consen 170 VGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKG 248 (347)
T ss_pred HHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccC
Confidence 999999999996 678888999999999999999999999988664443 4589999999986 47778888888
Q ss_pred CEEEEEcCCC-------CC-------------------CceeEEEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 236 GRVVSIIGSV-------TP-------------------PASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 236 G~~v~~g~~~-------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
|+...++... .. ....+.+....+.++.++++++.|+|+|.|++.|||
T Consensus 249 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~ 322 (347)
T KOG1198|consen 249 GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPF 322 (347)
T ss_pred CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeH
Confidence 7644442221 11 000112345789999999999999999999999996
No 85
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-30 Score=229.53 Aligned_cols=273 Identities=46% Similarity=0.692 Sum_probs=221.8
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++.+ ..++++ +.+.|++.+++|+|++.++++|++|.....|.+. .+...|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~ 77 (326)
T cd08272 1 MKALVLESFGGP-EVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVT 77 (326)
T ss_pred CeEEEEccCCCc-hheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Confidence 999999988876 557887 6777788999999999999999999998877653 2234577899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
+|++||+|++...+.. ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ +..++.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~ 153 (326)
T cd08272 78 RFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGG 153 (326)
T ss_pred CCCCCCEEEEccCCcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998753211 1368999999999999999999999999999999999999987 6789999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|.+|++++++++.. |.+++.++++ ++.+.++++|.+.+++.... +.. . .+++|+++|++++ ...++++
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~ 230 (326)
T cd08272 154 AGGVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEA 230 (326)
T ss_pred CCcHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHH
Confidence 999999999999995 9999999888 88888888998777776543 222 1 3579999999885 4778999
Q ss_pred hccCCEEEEEcCCCC-------CCceeE--EEec-----------cHHHHHHHHHHHHCCCeeEeec-ccccC
Q 023273 232 VKEGGRVVSIIGSVT-------PPASSF--VLTS-----------DGSILEKLNPYFESGKVKAIID-PKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~-------~~~~~~--~~~~-----------~~~~~~~~~~~~~~g~i~~~i~-~~~~~ 283 (284)
++++|+++.++.... .....+ .... ..+.+++++++++++.+++.++ ++||+
T Consensus 231 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 303 (326)
T cd08272 231 VALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPL 303 (326)
T ss_pred hccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecH
Confidence 999999999875420 111111 1100 1457888999999999988766 77764
No 86
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=4.7e-31 Score=234.15 Aligned_cols=275 Identities=29% Similarity=0.341 Sum_probs=208.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||+++++.+++. +++. +.|.|.|+++||+|++.++++|++|++++.+.. .......|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v 76 (341)
T PRK05396 1 MKALVKLKAEPG---LWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEV 76 (341)
T ss_pred CceEEEecCCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCC
Confidence 899999888854 7988 889999999999999999999999998776531 11122456789999999999999999
Q ss_pred CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
+++++||+|++.+.... ..+...+|+|++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~ 155 (341)
T PRK05396 77 TGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVH 155 (341)
T ss_pred CcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHH
Confidence 99999999988621100 001124699999999999999999999998877744 45556665
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEK 214 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~ 214 (284)
+... ...+|++|+|.| +|.+|++++++|+++ |+ ++++++.++++.+.++++|++.+++++..++.+ . .++
T Consensus 156 ~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 232 (341)
T PRK05396 156 TALS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG 232 (341)
T ss_pred HHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC
Confidence 5432 346899999987 799999999999995 88 577787888899999999998888876543322 1 468
Q ss_pred ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE---eccHHHHHHHHHHHHCC-CeeEee
Q 023273 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL---TSDGSILEKLNPYFESG-KVKAII 277 (284)
Q Consensus 215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~---~~~~~~~~~~~~~~~~g-~i~~~i 277 (284)
+|++|||.|. ...++++|+++|+++.+|....... ..+.. ....+.+..++++++++ ++.+.+
T Consensus 233 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (341)
T PRK05396 233 FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPII 312 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHhe
Confidence 9999999885 4789999999999999986532111 11111 11234566788889888 555566
Q ss_pred cccccC
Q 023273 278 DPKGLL 283 (284)
Q Consensus 278 ~~~~~~ 283 (284)
.+++++
T Consensus 313 ~~~~~l 318 (341)
T PRK05396 313 THRFPI 318 (341)
T ss_pred EEEEeH
Confidence 676653
No 87
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2.2e-30 Score=225.55 Aligned_cols=273 Identities=46% Similarity=0.664 Sum_probs=222.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCC-CCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||+++++.++.. +.+.++ +.+.|.++++||+|++.++++|++|+..+.|.+. ......|..+|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~ 78 (309)
T cd05289 1 MKAVRIHEYGGP-EVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGV 78 (309)
T ss_pred CceEEEcccCCc-cceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCC
Confidence 899999988876 446676 6677788999999999999999999998877542 1123447889999999999999999
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEc
Q 023273 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG 158 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g 158 (284)
.++++||+|++.... ...|+|++|+.++.+.++++|+++++..++.+++.+.++|+++. ...+.++++++|+|
T Consensus 79 ~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g 152 (309)
T cd05289 79 TGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHG 152 (309)
T ss_pred CCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence 999999999987520 12589999999999999999999999898889999999999985 45689999999999
Q ss_pred CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc--cCCCcccEEEeCCCC--cHHHHHhhcc
Q 023273 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE 234 (284)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~d~vid~~g~--~~~~~~~l~~ 234 (284)
++|.+|++++++++.. |.++++++.++ +.+.++++|.+.+++....++. ...+++|++++++|+ ...+++++++
T Consensus 153 ~~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~ 230 (309)
T cd05289 153 AAGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP 230 (309)
T ss_pred CCchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhc
Confidence 8899999999999995 99999888777 8888888888777776544333 234579999999986 4789999999
Q ss_pred CCEEEEEcCCCCCC------ceeEE---EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 235 GGRVVSIIGSVTPP------ASSFV---LTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 235 ~G~~v~~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+|+++.+|....+. ...+. .....+.+.+++++++++.+++.+++.||+
T Consensus 231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (309)
T cd05289 231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPL 288 (309)
T ss_pred CcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcH
Confidence 99999998643221 11111 112267899999999999999888888875
No 88
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.7e-30 Score=229.55 Aligned_cols=279 Identities=37% Similarity=0.479 Sum_probs=222.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++...+.+ ..+++. +.+.|.+.+++|+|++.++++|++|++.+.|..+. ....|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~ 77 (342)
T cd08266 1 MKAVVIRGHGGP-EVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI-KLPLPHILGSDGAGVVEAVGPGVT 77 (342)
T ss_pred CeEEEEecCCCc-cceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC-CCCCCeecccceEEEEEEeCCCCC
Confidence 899999866655 457787 67778889999999999999999999988876431 234577899999999999999999
Q ss_pred CCCCCCEEEEecCc------------------cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.|++||+|++.+.. ....+....|+|++|+.++.+.++++|+++++.+++.+++++.+||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 99999999986321 001112246899999999999999999999999999999999999999
Q ss_pred H-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcc
Q 023273 143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF 215 (284)
Q Consensus 143 l-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~ 215 (284)
+ ...++.++++++|+|+++.+|++++++++.. |.+++++++++++.+.++..+.+.+++........ ..+++
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCC
Confidence 7 5688899999999999899999999999995 99999999999999888888877666654322211 13579
Q ss_pred cEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC-Cc----------eeEE--EeccHHHHHHHHHHHHCCCeeEeeccc
Q 023273 216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPK 280 (284)
Q Consensus 216 d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~----------~~~~--~~~~~~~~~~~~~~~~~g~i~~~i~~~ 280 (284)
|++++++|. ...++++++++|+++.++..... .. ..+. .......+.+++++++++.+++.++++
T Consensus 237 d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 316 (342)
T cd08266 237 DVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSV 316 (342)
T ss_pred cEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccceeee
Confidence 999999985 57899999999999999765321 11 1111 112456788999999999998888787
Q ss_pred ccC
Q 023273 281 GLL 283 (284)
Q Consensus 281 ~~~ 283 (284)
|++
T Consensus 317 ~~~ 319 (342)
T cd08266 317 FPL 319 (342)
T ss_pred EcH
Confidence 764
No 89
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.5e-30 Score=230.11 Aligned_cols=272 Identities=36% Similarity=0.498 Sum_probs=216.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++. +++. +.+.|++.++||+|++.++++|++|.....|.++. .+|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~ 72 (334)
T cd08234 1 MKALVYEGPGE----LEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVT 72 (334)
T ss_pred CeeEEecCCCc----eEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCC
Confidence 89999998874 5888 88999999999999999999999999998887542 3677899999999999999999
Q ss_pred CCCCCCEEEEecCccc----c--------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINEKA----L--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~----~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
++++||+|++...... . .+....|+|++|++++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 151 (334)
T cd08234 73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG 151 (334)
T ss_pred CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence 9999999987321100 0 11124689999999999999999999998888765 677789988
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----CCCcccE
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----LPEKFDV 217 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~d~ 217 (284)
+...++.++++|+|+| +|.+|.+++++|+.. |++ ++++++++++.+.+++++.+.++++....... ..+++|+
T Consensus 152 l~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~ 229 (334)
T cd08234 152 LDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV 229 (334)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence 8778899999999997 799999999999995 887 88888899999999999987777765443211 2467999
Q ss_pred EEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC------------ceeEE-EeccHHHHHHHHHHHHCCCeeE--eecc
Q 023273 218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFV-LTSDGSILEKLNPYFESGKVKA--IIDP 279 (284)
Q Consensus 218 vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~g~i~~--~i~~ 279 (284)
+||++|. ...++++|+++|+++.+|...... +..+. .....+.+++++++++++.+++ .+++
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH 309 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence 9999974 478899999999999997543211 11111 1124567899999999999864 2555
Q ss_pred cccC
Q 023273 280 KGLL 283 (284)
Q Consensus 280 ~~~~ 283 (284)
+|++
T Consensus 310 ~~~~ 313 (334)
T cd08234 310 RLPL 313 (334)
T ss_pred EecH
Confidence 5553
No 90
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.1e-31 Score=232.29 Aligned_cols=270 Identities=33% Similarity=0.467 Sum_probs=209.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++ . ..++++ +.+.|+++++||+|++.++++|++|+....+.. ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~ 74 (325)
T cd08264 1 MKALVFEKSG-I-ENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPMPHIPGAEFAGVVEEVGDHVK 74 (325)
T ss_pred CeeEEeccCC-C-CceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC---CCCCCeecccceeEEEEEECCCCC
Confidence 8999998776 3 457887 677788999999999999999999998876521 123467899999999999999999
Q ss_pred CCCCCCEEEEecCc----c---cc-----------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINE----K---AL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~---~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
+|++||+|++...- + .. .+....|+|++|+.++.+.++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 154 (325)
T cd08264 75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154 (325)
T ss_pred CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 99999999876310 0 00 011136899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC--cccccCCCcccEEEe
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD 220 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~d~vid 220 (284)
+...+++++++|+|+|++|.+|++++++|+++ |.+++++++ .+.++++|.+.+++.+. ..+....+++|+++|
T Consensus 155 l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~ 229 (325)
T cd08264 155 LKTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVIN 229 (325)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEE
Confidence 97788999999999998899999999999996 999888763 36667788887877643 112222267999999
Q ss_pred CCCC--cHHHHHhhccCCEEEEEcCCC-CCCceeE--------EE----eccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TPPASSF--------VL----TSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~~~~~~--------~~----~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++|+ ...++++|+++|+++.+|... ....+++ .. ...+++++++++++...+ ..++++||+
T Consensus 230 ~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~ 305 (325)
T cd08264 230 SLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK--VKVWKTFKL 305 (325)
T ss_pred CCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC--ceeEEEEcH
Confidence 9985 478999999999999998642 1111110 11 123568899999996444 456677764
No 91
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=9.5e-31 Score=232.29 Aligned_cols=272 Identities=30% Similarity=0.429 Sum_probs=215.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||++++.++. +.++ +.+.|++.++||+|++.++++|++|.....+.++ ...|.++|+|++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~----l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~---~~~~~~~g~~~~G~V~~~g~~v~ 72 (343)
T cd08236 1 MKALVLTGPGD----LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA---YHPPLVLGHEFSGTVEEVGSGVD 72 (343)
T ss_pred CeeEEEecCCc----eeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC---CCCCcccCcceEEEEEEECCCCC
Confidence 89999998764 5888 7888999999999999999999999988877541 23467899999999999999999
Q ss_pred CCCCCCEEEEecCc----c--------------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 81 KFKVGDEVYGDINE----K--------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~----~--------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
.|++||+|++.+.. + ...+....|+|++|+.+|.+.++++|+++++++++++ ..+.|||++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 99999999986310 0 0011224799999999999999999999999888877 577899999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc---C--CCccc
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKFD 216 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~d 216 (284)
+...++.++++|+|+| +|.+|.+++++|+.+ |.+ ++++++++++.+.++++|.+.+++++...... . .+++|
T Consensus 152 l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 229 (343)
T cd08236 152 VRLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGAD 229 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence 8777889999999997 799999999999996 887 88888888999998999988888775433111 1 34699
Q ss_pred EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC-------------ceeE---EEec----cHHHHHHHHHHHHCCCe
Q 023273 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSF---VLTS----DGSILEKLNPYFESGKV 273 (284)
Q Consensus 217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~---~~~~----~~~~~~~~~~~~~~g~i 273 (284)
++|||.|. ...++++|+++|+++.+|....+. ...+ .... ..+.+++++++++++.+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (343)
T cd08236 230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI 309 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence 99999874 478899999999999998543221 1111 1111 15678899999999987
Q ss_pred e--EeecccccC
Q 023273 274 K--AIIDPKGLL 283 (284)
Q Consensus 274 ~--~~i~~~~~~ 283 (284)
. +.+.+++++
T Consensus 310 ~~~~~~~~~~~~ 321 (343)
T cd08236 310 KVEPLITHRLPL 321 (343)
T ss_pred ChHHheeeeecH
Confidence 5 445555553
No 92
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1e-30 Score=229.78 Aligned_cols=266 Identities=27% Similarity=0.402 Sum_probs=215.5
Q ss_pred EcccCCCc-cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 023273 6 YKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKV 84 (284)
Q Consensus 6 ~~~~g~~~-~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 84 (284)
++.++.+. +.++++ +.+.|.+.+++|+|++.++++|+.|...+.|.++. ...+|.++|||++|+|+.+|++++.+++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 80 (323)
T cd05282 3 YTQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLLV 80 (323)
T ss_pred eCcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCCC
Confidence 34455441 147777 67888899999999999999999999988776532 2245778999999999999999999999
Q ss_pred CCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchH
Q 023273 85 GDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGV 163 (284)
Q Consensus 85 Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~ 163 (284)
||+|++... .|+|++|+.++.+.++++|++++..+++.+++.+.+||+++ ....+.++++|+|+|++|.+
T Consensus 81 Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~v 151 (323)
T cd05282 81 GQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAV 151 (323)
T ss_pred CCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHH
Confidence 999999752 48999999999999999999999999999989999999998 45678999999999988999
Q ss_pred HHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccC
Q 023273 164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEG 235 (284)
Q Consensus 164 G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~ 235 (284)
|++++++|+++ |+++++++.++++.+.++++|.+.++++....+.. . .+++|++|||+|+ ...++++++++
T Consensus 152 g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~ 230 (323)
T cd05282 152 GRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG 230 (323)
T ss_pred HHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCC
Confidence 99999999996 99999999999999999999998888876433221 1 3579999999986 46789999999
Q ss_pred CEEEEEcCCCCC-----------CceeEEE---ec-----c----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 236 GRVVSIIGSVTP-----------PASSFVL---TS-----D----GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 236 G~~v~~g~~~~~-----------~~~~~~~---~~-----~----~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
|+++.+|..... ....+.. .. . .+.++++++++.+|.+.+.+.++|++
T Consensus 231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 301 (323)
T cd05282 231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPL 301 (323)
T ss_pred CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecH
Confidence 999998754221 1222211 11 1 24688899999999998877787764
No 93
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-30 Score=229.42 Aligned_cols=267 Identities=31% Similarity=0.452 Sum_probs=218.9
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
||+++...+.+ +.++++ +.+.|.|.++|++|++.++++|++|+....|.++.. ..+|.++|||++|+|+.+|+++..
T Consensus 2 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 78 (331)
T cd08273 2 REVVVTRRGGP-EVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTG 78 (331)
T ss_pred eeEEEccCCCc-ccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCcc
Confidence 78999988877 668888 789999999999999999999999999888765322 246778999999999999999999
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~ 160 (284)
|++||+|++... .|+|++|+.++.+.++++|++++..+++.+++++.+||+++ ...++.++++|+|+|++
T Consensus 79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 149 (331)
T cd08273 79 FEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS 149 (331)
T ss_pred CCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 999999999752 48999999999999999999999999999999999999998 45789999999999989
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---cCCCcccEEEeCCCC--cHHHHHhhccC
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAVKEG 235 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~d~vid~~g~--~~~~~~~l~~~ 235 (284)
|.+|++++++|+.+ |++++.++. +++.+.++++|... ++.+..++. ...+++|++++++|+ ...++++++++
T Consensus 150 g~ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~ 226 (331)
T cd08273 150 GGVGQALLELALLA-GAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPG 226 (331)
T ss_pred cHHHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCC
Confidence 99999999999995 999998887 88888888888643 343322221 123579999999986 47889999999
Q ss_pred CEEEEEcCCCCCCc--e----------------------eEEEec-----------cHHHHHHHHHHHHCCCeeEeeccc
Q 023273 236 GRVVSIIGSVTPPA--S----------------------SFVLTS-----------DGSILEKLNPYFESGKVKAIIDPK 280 (284)
Q Consensus 236 G~~v~~g~~~~~~~--~----------------------~~~~~~-----------~~~~~~~~~~~~~~g~i~~~i~~~ 280 (284)
|+++.+|....... + .+.... ..+.++.+++++++|.+++.+.++
T Consensus 227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 306 (331)
T cd08273 227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKR 306 (331)
T ss_pred CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceE
Confidence 99999986542111 0 001000 136788999999999998877777
Q ss_pred ccC
Q 023273 281 GLL 283 (284)
Q Consensus 281 ~~~ 283 (284)
|++
T Consensus 307 ~~~ 309 (331)
T cd08273 307 LPL 309 (331)
T ss_pred EcH
Confidence 764
No 94
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.6e-30 Score=228.61 Aligned_cols=268 Identities=36% Similarity=0.539 Sum_probs=216.8
Q ss_pred CeEEEEcccCCCcc--ceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCC
Q 023273 1 MKAWVYKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78 (284)
Q Consensus 1 m~a~~~~~~g~~~~--~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 78 (284)
|||+++++++.+.+ .++++ +.+.|++.+++++|++.++++|++|++.+.+.++ ....|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCCC
Confidence 89999999998721 36666 6788888999999999999999999998877653 2235678999999999999999
Q ss_pred CCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCC-----CC
Q 023273 79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK 152 (284)
Q Consensus 79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~ 152 (284)
+..|++||+|++... ...+|+|++|+.++.+.++++|++++.++++.+++.+.|||+++ ...++.+ ++
T Consensus 78 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 151 (336)
T cd08252 78 VTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGK 151 (336)
T ss_pred CCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 999999999988531 01368999999999999999999999999999999999999987 5677776 99
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---cccC-CCcccEEEeCCCC---
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ--- 224 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~d~vid~~g~--- 224 (284)
+|+|+|++|.+|++++++|+.+ | .++++++.++++.+.++++|.+.+++..... +... .+++|++||++|+
T Consensus 152 ~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~ 230 (336)
T cd08252 152 TLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQH 230 (336)
T ss_pred EEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHH
Confidence 9999998999999999999996 8 9999999999999999999988888765321 1111 3579999999984
Q ss_pred cHHHHHhhccCCEEEEEcCCCC--------CCceeEEE---e-----------ccHHHHHHHHHHHHCCCeeEeec
Q 023273 225 CDKALKAVKEGGRVVSIIGSVT--------PPASSFVL---T-----------SDGSILEKLNPYFESGKVKAIID 278 (284)
Q Consensus 225 ~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~---~-----------~~~~~~~~~~~~~~~g~i~~~i~ 278 (284)
...++++++++|+++.+|.... .....+.. . ...+.++++++++.+|.+++.+.
T Consensus 231 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 306 (336)
T cd08252 231 WDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLT 306 (336)
T ss_pred HHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEeccee
Confidence 4788999999999999975421 11111111 0 01245788999999999987644
No 95
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.9e-30 Score=225.83 Aligned_cols=270 Identities=38% Similarity=0.540 Sum_probs=219.4
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.+ ..+++. +.+.|.+.+++++|++.++++|++|++...|.++. ....|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~ 77 (323)
T cd05276 1 MKAIVIKEPGGP-EVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP-PPGASDILGLEVAGVVVAVGPGVT 77 (323)
T ss_pred CeEEEEecCCCc-ccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC-CCCCCCcccceeEEEEEeeCCCCC
Confidence 999999987765 557787 66777789999999999999999999988776532 224568899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
.+++||+|+++.. +|+|++|+.++.+.++++|+++++.+++.++.++.++|+++ ....+.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~ 148 (323)
T cd05276 78 GWKVGDRVCALLA---------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148 (323)
T ss_pred CCCCCCEEEEecC---------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998642 58999999999999999999999999999999999999998 4578899999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|.+|++++++++.. |++++++++++++.+.+++++.+.+++.....+.. . .+++|+++++.|+ ...++++
T Consensus 149 ~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~ 227 (323)
T cd05276 149 ASGVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRA 227 (323)
T ss_pred cChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence 999999999999995 99999999999999999888887777765433221 1 3579999999986 4778999
Q ss_pred hccCCEEEEEcCCCCC-----------CceeEEE---ec---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVTP-----------PASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.++..... ....+.. .. ....+.++.+++.++.+++.+++.|++
T Consensus 228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (323)
T cd05276 228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPL 302 (323)
T ss_pred hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcH
Confidence 9999999998754211 1111110 00 113467788889999998877777764
No 96
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.8e-30 Score=225.83 Aligned_cols=272 Identities=28% Similarity=0.362 Sum_probs=213.2
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
||+++...+.+ ..++++ +.|.|.++++||+|++.++++|++|++.+.|.++. ....|.++|||++|+|+. ++++.
T Consensus 1 ~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~ 75 (323)
T TIGR02823 1 KALVVEKEDGK-VSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPR 75 (323)
T ss_pred CeEEEccCCCC-cceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCC
Confidence 68899988876 678899 89999999999999999999999999988887532 124578899999999988 56678
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccCCCC-EEEEE
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILVL 157 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI~ 157 (284)
|++||+|++.... .+...+|+|++|+.+|.+.++++|+++++++++.+++.+.+|+.++. ...+.+++ +|+|+
T Consensus 76 ~~~Gd~V~~~~~~---~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ 152 (323)
T TIGR02823 76 FREGDEVIVTGYG---LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVT 152 (323)
T ss_pred CCCCCEEEEccCC---CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEE
Confidence 9999999986421 11123689999999999999999999999999999999889987763 34588898 99999
Q ss_pred cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc--ccC-CCcccEEEeCCCC--cHHHHHhh
Q 023273 158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI--EDL-PEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 158 ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~d~vid~~g~--~~~~~~~l 232 (284)
|++|.+|.+++++|+.+ |+++++++.++++.+.++++|.+.+++.++... ... ..++|+++||+|+ ...+++++
T Consensus 153 g~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l 231 (323)
T TIGR02823 153 GATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQL 231 (323)
T ss_pred cCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHh
Confidence 98899999999999996 999999988888889999999888887653321 111 2359999999985 57899999
Q ss_pred ccCCEEEEEcCCCCC-----------CceeEEE---e-c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 233 KEGGRVVSIIGSVTP-----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 233 ~~~G~~v~~g~~~~~-----------~~~~~~~---~-~----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++|+++.+|..... .+..+.. . . ..+.++.+.+++..+.+++.+ ++||+
T Consensus 232 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 300 (323)
T TIGR02823 232 KYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESIT-REITL 300 (323)
T ss_pred CCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCce-eeecH
Confidence 999999999864311 1111111 0 0 123466777778888876643 46664
No 97
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.98 E-value=3.6e-30 Score=228.65 Aligned_cols=273 Identities=25% Similarity=0.348 Sum_probs=209.6
Q ss_pred EEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcC-CCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 3 AWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 3 a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|+++..++. ++++ +.+.|.|.++||+|++.++++|++|.+.+.+ ..+......|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~----~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~ 75 (343)
T cd05285 1 AAVLHGPGD----LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTH 75 (343)
T ss_pred CceEecCCc----eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence 356666644 6888 7888999999999999999999999887642 222112235678999999999999999999
Q ss_pred CCCCCEEEEecCccc------------------c-CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 82 FKVGDEVYGDINEKA------------------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~------------------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
|++||+|++.+.... . ......|+|++|++++.+.++++|+++++++++.+ .++.+|+++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 154 (343)
T cd05285 76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHA 154 (343)
T ss_pred CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHH
Confidence 999999987321100 0 00113689999999999999999999999888766 577889998
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccc-------ccC--C
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI-------EDL--P 212 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~--~ 212 (284)
+...+++++++|+|.| +|.+|++++++|+.+ |.+ ++++++++++.+.++++|.+.+++++...+ ... +
T Consensus 155 ~~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~ 232 (343)
T cd05285 155 CRRAGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG 232 (343)
T ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCC
Confidence 8889999999999987 699999999999996 887 888888899999999999998888765432 111 3
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc----------eeEEE-eccHHHHHHHHHHHHCCCee--Ee
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL-TSDGSILEKLNPYFESGKVK--AI 276 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~g~i~--~~ 276 (284)
+++|++|||.|+ ...++++++++|+++.+|....... +.+.. ....+.+.+++++++++.+. +.
T Consensus 233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (343)
T cd05285 233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPL 312 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHh
Confidence 569999999985 4788999999999999875432111 11111 12337788999999999865 44
Q ss_pred ecccccC
Q 023273 277 IDPKGLL 283 (284)
Q Consensus 277 i~~~~~~ 283 (284)
+.++|++
T Consensus 313 ~~~~~~l 319 (343)
T cd05285 313 ITHRFPL 319 (343)
T ss_pred EEEEEeH
Confidence 5666653
No 98
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.98 E-value=1e-29 Score=222.40 Aligned_cols=262 Identities=29% Similarity=0.413 Sum_probs=205.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..+++ ..++++ +.+.|++.+++|+|++.++++|++|.+...|.+. ....|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~--~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 1 MKALVKTGPGP--GNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CeeEEEecCCC--CceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcC
Confidence 89999987553 347888 8899999999999999999999999988877642 223467899999999999999999
Q ss_pred CCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
.|++||+|++....+. ..+....|+|++|++++.+.++++|+++++++++ ++....++|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 9999999998642000 0011235899999999999999999999988776 7777789999
Q ss_pred HH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHHcCCcEEeeCCCccccc------CC
Q 023273 142 GL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSLGADLAIDYTKENIED------LP 212 (284)
Q Consensus 142 al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~------~~ 212 (284)
++ ...+++++++|+|.| +|.+|.+++++|+.+ |.+++++.. ++++.+.++++|.+.+ ++...++.. ..
T Consensus 155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~ 231 (306)
T cd08258 155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDG 231 (306)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCC
Confidence 98 568889999999976 899999999999996 999877633 4557788888998766 655433221 13
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCC-CCce------------eEEEeccHHHHHHHHHHHHCC
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-PPAS------------SFVLTSDGSILEKLNPYFESG 271 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~g 271 (284)
+++|++||+.|. ...++++|+++|+++.+|.... +..+ ........++++++++++++|
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 579999999974 4788999999999999987541 1111 112233578899999999876
No 99
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.98 E-value=2.3e-29 Score=221.51 Aligned_cols=273 Identities=25% Similarity=0.297 Sum_probs=214.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++.++|.+ +.++++ +.|.|+|+++|++|++.++++|++|.....|.++.. ..+|.++|||++|+|++ ++++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~ 75 (324)
T cd08288 1 FKALVLEKDDGG-TSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIV-RTFPLVPGIDLAGTVVE--SSSP 75 (324)
T ss_pred CeeEEEeccCCC-cceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcccc-CCCCCccccceEEEEEe--CCCC
Confidence 999999998876 668999 889999999999999999999999999887764211 23567899999999998 7778
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH---hcccC-CCCEEEE
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFS-AGKSILV 156 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~-~g~~vlI 156 (284)
++++||+|++... ..+.+.+|+|++|++++.+.++++|++++.++++.+++.+++++.++. ..+.. ++++|+|
T Consensus 76 ~~~~Gd~V~~~~~---~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI 152 (324)
T cd08288 76 RFKPGDRVVLTGW---GVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV 152 (324)
T ss_pred CCCCCCEEEECCc---cCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE
Confidence 8999999998531 111123689999999999999999999999999999999888887753 34555 6789999
Q ss_pred EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccc--ccC-CCcccEEEeCCCC--cHHHHHh
Q 023273 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI--EDL-PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|++|.+|.+++++|+.+ |+++++++.+++|.+.++++|++.++++++... ... .+++|.++|++++ ....+.+
T Consensus 153 ~ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 231 (324)
T cd08288 153 TGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQ 231 (324)
T ss_pred ECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHH
Confidence 998899999999999996 999999999999999999999988888754322 111 3468999999986 3677888
Q ss_pred hccCCEEEEEcCCCC-----------CCceeEEE----e----ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVT-----------PPASSFVL----T----SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++.+|+++.+|.... .....+.. . ...+.++.+.+++.++.+++ |.+++|+
T Consensus 232 ~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~ 301 (324)
T cd08288 232 TRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPL 301 (324)
T ss_pred hcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecH
Confidence 999999999876421 11111111 0 12356777888888998876 4567764
No 100
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.98 E-value=7.3e-30 Score=226.55 Aligned_cols=274 Identities=29% Similarity=0.354 Sum_probs=208.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||+++++.++.. +++. +.+.|.|+++|++|++.++++|++|...+.+.. .......|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v 76 (341)
T cd05281 1 MKAIVKTKAGPG---AELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGV 76 (341)
T ss_pred CcceEEecCCCc---eEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCC
Confidence 999999988864 7888 788899999999999999999999988765431 11122356789999999999999999
Q ss_pred CCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHH
Q 023273 80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 141 (284)
+.+++||+|++...... ..+....|+|++|++++.+.++++|++++++ .++++.++.++++
T Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~ 155 (341)
T cd05281 77 TRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVH 155 (341)
T ss_pred CCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHH
Confidence 99999999988621100 0011236899999999999999999999874 4466677778888
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKF 215 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~ 215 (284)
++. ....++++|+|.| +|.+|++++++|+.+ |. ++++++.+++|.+.++++|.+++++++...+.. ..+++
T Consensus 156 ~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 232 (341)
T cd05281 156 TVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV 232 (341)
T ss_pred HHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCC
Confidence 775 4557899999987 699999999999996 88 688887888899988999988887765433321 13589
Q ss_pred cEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCCc-----------eeEEE---eccHHHHHHHHHHHHCCCee--Ee
Q 023273 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----------SSFVL---TSDGSILEKLNPYFESGKVK--AI 276 (284)
Q Consensus 216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~g~i~--~~ 276 (284)
|++||++|+ ...++++|+++|+++.+|....+.. +.+.. ....+.+.++++++++|.+. +.
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence 999999975 4788999999999999875432111 11111 11246678899999999875 34
Q ss_pred eccccc
Q 023273 277 IDPKGL 282 (284)
Q Consensus 277 i~~~~~ 282 (284)
+.+++|
T Consensus 313 ~~~~~~ 318 (341)
T cd05281 313 ITHKLP 318 (341)
T ss_pred eEEEec
Confidence 555555
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=4.7e-30 Score=226.10 Aligned_cols=235 Identities=27% Similarity=0.353 Sum_probs=193.0
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..+|++ ..++++ +.+.|.|.++||+|++.++++|++|.....+... .....|.++|||++|+|++.| ++
T Consensus 1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~ 75 (326)
T cd08289 1 FQALVVEKDEDD-VSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DP 75 (326)
T ss_pred CeeEEEeccCCc-ceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CC
Confidence 999999988875 567888 7888999999999999999999999876643211 112347889999999999854 56
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh---ccc-CCCCEEEE
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAF-SAGKSILV 156 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~-~~g~~vlI 156 (284)
+|++||+|++.... .+...+|+|++|+.++.+.++++|+++++++++.+++++.||+.++.. ... .++++|+|
T Consensus 76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI 152 (326)
T cd08289 76 RFKPGDEVIVTSYD---LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV 152 (326)
T ss_pred CCCCCCEEEEcccc---cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 79999999987531 112347999999999999999999999999999999999999988742 333 34789999
Q ss_pred EcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc---ccc-CCCcccEEEeCCCC--cHHHHH
Q 023273 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED-LPEKFDVVFDAVGQ--CDKALK 230 (284)
Q Consensus 157 ~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~-~~~~~d~vid~~g~--~~~~~~ 230 (284)
+|++|.+|.+++++|+++ |++++++++++++.+.++++|.+.+++.+... +.. ..+++|++||++|+ ...+++
T Consensus 153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~ 231 (326)
T cd08289 153 TGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLS 231 (326)
T ss_pred EcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHH
Confidence 998899999999999996 99999999999999999999988888765421 111 13579999999985 578999
Q ss_pred hhccCCEEEEEcCC
Q 023273 231 AVKEGGRVVSIIGS 244 (284)
Q Consensus 231 ~l~~~G~~v~~g~~ 244 (284)
+++++|+++.+|..
T Consensus 232 ~l~~~G~~i~~g~~ 245 (326)
T cd08289 232 TLQYGGSVAVSGLT 245 (326)
T ss_pred HhhcCCEEEEEeec
Confidence 99999999999864
No 102
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1.4e-29 Score=221.88 Aligned_cols=275 Identities=33% Similarity=0.527 Sum_probs=220.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++..++.+ ..+.+. +.+.|.+.+++++|++.++++|++|.....|.++. ....|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~ 77 (325)
T cd08253 1 MRAIRYHEFGAP-DVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVD 77 (325)
T ss_pred CceEEEcccCCc-ccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCC
Confidence 899999887654 446787 78888899999999999999999999888776532 234678899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga 159 (284)
+|++||+|++...... ...|++++|+.++.+.++++|+++++.+++.+++++.+||+++. ..++.+|++++|+|+
T Consensus 78 ~~~~Gd~v~~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~ 153 (325)
T cd08253 78 GLKVGDRVWLTNLGWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG 153 (325)
T ss_pred CCCCCCEEEEeccccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence 9999999999753210 13689999999999999999999999999999999999999984 588999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~ 231 (284)
++.+|++++++++.. |.+++++++++++.+.++++|.+.+++....++.. ..+++|++++++|+ ....+++
T Consensus 154 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (325)
T cd08253 154 SGAVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV 232 (325)
T ss_pred CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence 999999999999995 99999999999999999889988777765433211 13579999999986 4778899
Q ss_pred hccCCEEEEEcCCCCC----------CceeEEE---e-c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVTP----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~----------~~~~~~~---~-~----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.++..... ....+.. . . ..+.++.+.+++.++.+++.+.+.|++
T Consensus 233 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 302 (325)
T cd08253 233 LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPL 302 (325)
T ss_pred hCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcH
Confidence 9999999999763211 1111111 1 1 124566777788889888777777664
No 103
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=2.3e-29 Score=224.24 Aligned_cols=273 Identities=33% Similarity=0.493 Sum_probs=208.7
Q ss_pred CeEEEEcccCCCccceEEeccccCCCC---CCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSL---REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~---~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 77 (284)
+|++++..++.+ ++++ ..+.|.| .+++|+|++.++++|++|+....+... .....|.++|+|++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~---~~~~-~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~ 75 (352)
T cd08247 1 YKALTFKNNTSP---LTIT-TIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGS 75 (352)
T ss_pred CceEEEecCCCc---ceee-ccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCc
Confidence 588999999887 4555 4455444 899999999999999999987754321 1112367899999999999999
Q ss_pred CCC-CCCCCCEEEEecCccccCCCCCCCceeeEEeeecC----ceeeCCCCCCHHhhhcccchHHHHHHHHHh-c-ccCC
Q 023273 78 QVK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASLPLATETAYEGLER-S-AFSA 150 (284)
Q Consensus 78 ~~~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~~-~-~~~~ 150 (284)
+++ .|++||+|++...... ...|+|++|++++.. .++++|+++++.+++.+++++.|||+++.. . ++++
T Consensus 76 ~v~~~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~ 151 (352)
T cd08247 76 NVASEWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGP 151 (352)
T ss_pred ccccCCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCC
Confidence 998 8999999998753211 136899999999987 789999999999999999999999999854 4 6999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCcc----ccc----C--CCcccEEE
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN----IED----L--PEKFDVVF 219 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~----~--~~~~d~vi 219 (284)
|++|+|+|+++.+|.+++++|+.+++. .++.+. ++++.+.++++|.+.+++.+... +.. . .+++|++|
T Consensus 152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl 230 (352)
T cd08247 152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLIL 230 (352)
T ss_pred CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEE
Confidence 999999999999999999999985354 455554 55666677889988888865433 111 1 46899999
Q ss_pred eCCCC---cHHHHHhhc---cCCEEEEEcCCC----CCC-------------cee----E-----E---EeccHHHHHHH
Q 023273 220 DAVGQ---CDKALKAVK---EGGRVVSIIGSV----TPP-------------ASS----F-----V---LTSDGSILEKL 264 (284)
Q Consensus 220 d~~g~---~~~~~~~l~---~~G~~v~~g~~~----~~~-------------~~~----~-----~---~~~~~~~~~~~ 264 (284)
||+|+ ...++++++ ++|+++.+++.. ... .+. + . .....+.+..+
T Consensus 231 ~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (352)
T cd08247 231 DCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKC 310 (352)
T ss_pred ECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHH
Confidence 99986 367899999 999999875322 100 000 0 0 01123578889
Q ss_pred HHHHHCCCeeEeecccccC
Q 023273 265 NPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 265 ~~~~~~g~i~~~i~~~~~~ 283 (284)
++++.+|.+++.++++||+
T Consensus 311 ~~~~~~~~l~~~~~~~~~l 329 (352)
T cd08247 311 AELIADGKVKPPIDSVYPF 329 (352)
T ss_pred HHHHhCCCeEeeeccEecH
Confidence 9999999999888888875
No 104
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=1.2e-29 Score=228.54 Aligned_cols=264 Identities=30% Similarity=0.377 Sum_probs=202.6
Q ss_pred eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-----CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 023273 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-----TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90 (284)
Q Consensus 16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~ 90 (284)
++++ +.|.|+++++||+|++.++++|++|++.+.+.... ...++|.++|||++|+|+++|+++++|++||+|++
T Consensus 39 ~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 39 LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 7888 88999999999999999999999999887632100 11345788999999999999999999999999986
Q ss_pred ecCc-------ccc-----------CCCCCCCceeeEEeeecCceeeCCCC-------CCHHhhhcccchHHHHHHHH-H
Q 023273 91 DINE-------KAL-----------DHPKRNGSLAEYTAVEENLLALKPKN-------LSFVEAASLPLATETAYEGL-E 144 (284)
Q Consensus 91 ~~~~-------~~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~-------~~~~~aa~~~~~~~ta~~al-~ 144 (284)
.+.. +.. .+...+|+|++|++++.+.++++|+. ++.+ +++++.++++||+++ .
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~ 196 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI 196 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence 3211 000 01123689999999999999999986 3444 566777888999998 3
Q ss_pred h-cccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCc---cccc----C--CC
Q 023273 145 R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKE---NIED----L--PE 213 (284)
Q Consensus 145 ~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~----~--~~ 213 (284)
. .++++|++|+|+| +|.+|++++++|+.+ |. ++++++++++|.+.++++|.+++++++.. .+.. . ++
T Consensus 197 ~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~ 274 (384)
T cd08265 197 RGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGW 274 (384)
T ss_pred hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCC
Confidence 4 6899999999996 799999999999996 88 78888888889999999999888876532 2111 1 45
Q ss_pred cccEEEeCCCC----cHHHHHhhccCCEEEEEcCCCCCCce----------eEEE---eccHHHHHHHHHHHHCCCeeEe
Q 023273 214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL---TSDGSILEKLNPYFESGKVKAI 276 (284)
Q Consensus 214 ~~d~vid~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~g~i~~~ 276 (284)
++|+++|++|+ ...++++|+++|+++.+|.......+ .+.. ......++++++++++|.+++.
T Consensus 275 gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~ 354 (384)
T cd08265 275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMT 354 (384)
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChH
Confidence 79999999985 26789999999999999754321111 1111 1123578999999999999763
Q ss_pred --ecccccC
Q 023273 277 --IDPKGLL 283 (284)
Q Consensus 277 --i~~~~~~ 283 (284)
++++|++
T Consensus 355 ~~~~~~~~~ 363 (384)
T cd08265 355 KIITARFPL 363 (384)
T ss_pred HheEEEeeH
Confidence 6677764
No 105
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=6.7e-30 Score=223.57 Aligned_cols=253 Identities=27% Similarity=0.317 Sum_probs=202.1
Q ss_pred eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHH-cCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCc
Q 023273 16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE 94 (284)
Q Consensus 16 ~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 94 (284)
++++ +.+.|++.++||+|++.++++|++|...+ .|..+......|.++|+|++|+|+.+|++++++++||+|++..
T Consensus 7 ~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 83 (312)
T cd08269 7 FEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-- 83 (312)
T ss_pred eEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence 7888 78889999999999999999999999887 6654322223477899999999999999999999999999864
Q ss_pred cccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHh
Q 023273 95 KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHV 174 (284)
Q Consensus 95 ~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~ 174 (284)
.|+|++|++++.+.++++|+++ ..++....++.++++++...+++++++++|+| +|.+|.+++++|+.+
T Consensus 84 --------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~~ 152 (312)
T cd08269 84 --------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAAA 152 (312)
T ss_pred --------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 5899999999999999999998 22222236778899988888899999999997 799999999999996
Q ss_pred cCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273 175 FGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 175 ~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~ 244 (284)
|++ ++++.+++++.+.++++|.+.+++.+...+.. . .+++|++|||.|. ...++++|+++|+++.+|..
T Consensus 153 -g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 153 -GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH 231 (312)
T ss_pred -CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence 988 98888888899988999988887754433222 1 3579999999874 47899999999999999854
Q ss_pred CC-CCc----------eeEEE---e---ccHHHHHHHHHHHHCCCeeE--eecccccC
Q 023273 245 VT-PPA----------SSFVL---T---SDGSILEKLNPYFESGKVKA--IIDPKGLL 283 (284)
Q Consensus 245 ~~-~~~----------~~~~~---~---~~~~~~~~~~~~~~~g~i~~--~i~~~~~~ 283 (284)
.. +.. .++.. . ...+.++++++++++|.+++ .+.++|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 289 (312)
T cd08269 232 QDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPL 289 (312)
T ss_pred CCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecH
Confidence 31 111 11111 0 12468999999999999987 46677764
No 106
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=3.5e-29 Score=219.94 Aligned_cols=271 Identities=38% Similarity=0.551 Sum_probs=217.3
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
|||+++..++. ...++++ +.+.|++.+++++|++.++++|++|+....+.++. ...|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~ 76 (325)
T cd08271 1 MKAWVLPKPGA-ALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSYPHVPGVDGAGVVVAVGAKVT 76 (325)
T ss_pred CeeEEEccCCC-cceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCcccccceEEEEEEeCCCCC
Confidence 99999999984 2347898 88999999999999999999999999887775421 12367899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
++++||+|++... ....|+|++|+.++.+.++++|++++..+++.+.+.+.++|+++ +..++.+|++++|+|+
T Consensus 77 ~~~~Gd~V~~~~~------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~ 150 (325)
T cd08271 77 GWKVGDRVAYHAS------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150 (325)
T ss_pred cCCCCCEEEeccC------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 9999999998742 11358999999999999999999999999999999999999998 5678899999999998
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~ 231 (284)
++.+|++++++++.. |++++++. ++++.+.++++|.+.+++.....+.. ..+++|++++++++ ...++++
T Consensus 151 ~~~ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 228 (325)
T cd08271 151 AGGVGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT 228 (325)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence 899999999999995 99988877 67788888889988787765433221 13579999999885 3678999
Q ss_pred hccCCEEEEEcCCCCC-------CceeE---EE------e------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVTP-------PASSF---VL------T------SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~-------~~~~~---~~------~------~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.++..... ....+ .. . ...+.+.+++++++++.+++...++|++
T Consensus 229 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 302 (325)
T cd08271 229 LAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPF 302 (325)
T ss_pred hccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcH
Confidence 9999999998654211 11111 11 0 1124567888999999998876666653
No 107
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=1.3e-29 Score=224.72 Aligned_cols=271 Identities=27% Similarity=0.382 Sum_probs=206.8
Q ss_pred EEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHc-CCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 023273 5 VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83 (284)
Q Consensus 5 ~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 83 (284)
++++.+. ++++ +.+.|+++++||+|++.++++|++|..... |.++.....+|.++|+|++|+|+++|+++++|+
T Consensus 2 ~~~~~~~----~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~ 76 (339)
T cd08232 2 VIHAAGD----LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLA 76 (339)
T ss_pred eeccCCc----eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence 4555554 6888 788999999999999999999999988763 433222234577899999999999999999999
Q ss_pred CCCEEEEecCcccc------------------CC-----CCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273 84 VGDEVYGDINEKAL------------------DH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (284)
Q Consensus 84 ~Gd~V~~~~~~~~~------------------~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (284)
+||+|++.+..... .+ ...+|+|++|++++.+.++++|++++.++++. ..++.++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~ 155 (339)
T cd08232 77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVAL 155 (339)
T ss_pred CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHH
Confidence 99999874210000 00 12369999999999999999999999888765 57778999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCcEEeeCCCccccc---CCCccc
Q 023273 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFD 216 (284)
Q Consensus 141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d 216 (284)
+++......++++|+|.| +|.+|.+++++|+.+ |. ++++++.++++.+.+++++.+++++++...+.. ..+++|
T Consensus 156 ~~l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd 233 (339)
T cd08232 156 HAVNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFD 233 (339)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCcc
Confidence 998654434999999987 799999999999996 87 788888888888888999988888876443222 234699
Q ss_pred EEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE-eccHHHHHHHHHHHHCCCeeE--eeccc
Q 023273 217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVKA--IIDPK 280 (284)
Q Consensus 217 ~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~g~i~~--~i~~~ 280 (284)
++||+.|. ...++++|+++|+++.++....+. .+.+.. ....+.++++++++++|.+++ .+.++
T Consensus 234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence 99999984 478999999999999987543111 111111 123567899999999998853 46677
Q ss_pred ccC
Q 023273 281 GLL 283 (284)
Q Consensus 281 ~~~ 283 (284)
|++
T Consensus 314 ~~~ 316 (339)
T cd08232 314 FPL 316 (339)
T ss_pred ecH
Confidence 664
No 108
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.97 E-value=4.6e-29 Score=223.34 Aligned_cols=275 Identities=25% Similarity=0.321 Sum_probs=204.9
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
|+++++..+.. ++++ +.+.|.|.++||+|++.++++|++|.+.+.+.... ....+|.++|||++|+|+++|+++
T Consensus 18 ~~~~~~~~~~~----l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (364)
T PLN02702 18 NMAAWLVGVNT----LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV 92 (364)
T ss_pred cceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence 34555555543 6887 77888899999999999999999999988763211 112357789999999999999999
Q ss_pred CCCCCCCEEEEecCccc-------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHH
Q 023273 80 KKFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 140 (284)
++|++||+|++.+.... ......+|+|++|+.++...++++|+++++.++++. .++.+++
T Consensus 93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~ 171 (364)
T PLN02702 93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGV 171 (364)
T ss_pred CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHH
Confidence 99999999987421000 000123689999999999999999999998887752 2344588
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCC--Cccccc-------
Q 023273 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT--KENIED------- 210 (284)
Q Consensus 141 ~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~------- 210 (284)
+++...++.++++|+|+| +|++|++++++|+.+ |++ +++++.+++|.+.++++|++..++.. ..++..
T Consensus 172 ~~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
T PLN02702 172 HACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQK 249 (364)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhh
Confidence 888778889999999997 799999999999996 875 66677788889989999988776542 122211
Q ss_pred -CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCCC----------ceeEEE-eccHHHHHHHHHHHHCCCee-
Q 023273 211 -LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVK- 274 (284)
Q Consensus 211 -~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~g~i~- 274 (284)
..+++|++||++|+ ...++++|+++|+++.+|...... .+++.. ......++.++++++++.+.
T Consensus 250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~ 329 (364)
T PLN02702 250 AMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDV 329 (364)
T ss_pred hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCc
Confidence 13579999999984 489999999999999998532111 111111 12346788999999999885
Q ss_pred -EeecccccC
Q 023273 275 -AIIDPKGLL 283 (284)
Q Consensus 275 -~~i~~~~~~ 283 (284)
+.++++|+|
T Consensus 330 ~~~~~~~~~l 339 (364)
T PLN02702 330 KPLITHRFGF 339 (364)
T ss_pred hHheEEEecc
Confidence 456777553
No 109
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.97 E-value=3.6e-29 Score=220.96 Aligned_cols=273 Identities=32% Similarity=0.426 Sum_probs=216.3
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|+++++.+|.. ++++ +.|.|.+.+++++|++.++++|++|...+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~~g~~~~~ 74 (330)
T cd08245 1 KAAVVHAAGGP---LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG--SKYPLVPGHEIVGEVVEVGAGVEG 74 (330)
T ss_pred CeEEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC--CCCCcccCccceEEEEEECCCCcc
Confidence 68899988654 7888 88889899999999999999999999998886532 245778999999999999999999
Q ss_pred CCCCCEEEEec-----Ccccc--------------CCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHH
Q 023273 82 FKVGDEVYGDI-----NEKAL--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142 (284)
Q Consensus 82 ~~~Gd~V~~~~-----~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a 142 (284)
|++||+|+..+ +.+.. .+....|+|++|+.++.+.++++|+++++.+++.+.+.+.|||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 99999998431 11000 011236899999999999999999999999999999999999999
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc-cCCCcccEEEeC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA 221 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~d~vid~ 221 (284)
+...++.++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....... ...+++|+++++
T Consensus 155 l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LRDAGPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 9768899999999997 677999999999996 9999999999999999999998877776433221 123579999999
Q ss_pred CCC---cHHHHHhhccCCEEEEEcCCCCCC----ceeEE---------EeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 222 VGQ---CDKALKAVKEGGRVVSIIGSVTPP----ASSFV---------LTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++ ...++++|+++|+++.++...... ...+. .......++++++++.++.+.+.+ ++||+
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-~~~~~ 309 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMI-ETFPL 309 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceE-EEEcH
Confidence 774 478899999999999997542111 01110 011457888999999999987643 45553
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=5.6e-29 Score=217.44 Aligned_cols=267 Identities=34% Similarity=0.444 Sum_probs=215.9
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
||+.+..++.+ ..+.+. +.+.+.+.++|++|++.++++|++|++...+.++ ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~~g~~~~~ 75 (320)
T cd05286 1 KAVRIHKTGGP-EVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP---LPLPFVLGVEGAGVVEAVGPGVTG 75 (320)
T ss_pred CeEEEecCCCc-cceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC---CCCCccCCcceeEEEEEECCCCCC
Confidence 56777777765 456776 6666778999999999999999999998877653 234678999999999999999999
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~ 160 (284)
+++||+|++.. ..|+|++|+.++.+.++++|++++..+++.+++...++|+++ ...++.+|++|+|+|++
T Consensus 76 ~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~ 146 (320)
T cd05286 76 FKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAA 146 (320)
T ss_pred CCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999863 158999999999999999999999999998999999999998 46889999999999999
Q ss_pred chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhh
Q 023273 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l 232 (284)
|++|++++++++.+ |+++++++.++++.+.++++|.+.+++.....+.. . .+++|++|+|+++ ...+++++
T Consensus 147 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l 225 (320)
T cd05286 147 GGVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL 225 (320)
T ss_pred chHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence 99999999999996 99999999999999999999988887765433221 1 3579999999885 47889999
Q ss_pred ccCCEEEEEcCCCCC-----------CceeEEE------ecc----HHHHHHHHHHHHCCCeeEeecccccC
Q 023273 233 KEGGRVVSIIGSVTP-----------PASSFVL------TSD----GSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 233 ~~~G~~v~~g~~~~~-----------~~~~~~~------~~~----~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++|+++.+|..... ..+.+.. ... .+.++++++++.++.+++.+.+.|++
T Consensus 226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 297 (320)
T cd05286 226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPL 297 (320)
T ss_pred ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcH
Confidence 999999999754321 1122210 011 24566788899999988777676653
No 111
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=1.7e-29 Score=224.06 Aligned_cols=269 Identities=27% Similarity=0.326 Sum_probs=204.2
Q ss_pred cccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023273 7 KEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVG 85 (284)
Q Consensus 7 ~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 85 (284)
+.++.. ++++ +.|.|.|+++|++|++.++++|++|...+.+.. .....++|.++|+|++|+|+++|+++++|++|
T Consensus 5 ~~~~~~---~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 80 (340)
T TIGR00692 5 TKPGYG---AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVG 80 (340)
T ss_pred ccCCCC---cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCC
Confidence 456655 7888 788899999999999999999999998765541 11122356689999999999999999999999
Q ss_pred CEEEEecCc-------cc-----------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcc
Q 023273 86 DEVYGDINE-------KA-----------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA 147 (284)
Q Consensus 86 d~V~~~~~~-------~~-----------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~ 147 (284)
|+|++.... +. ..+....|+|++|++++.+.++++|++++.+. ++++.++.++++++ ...
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~-~~~ 158 (340)
T TIGR00692 81 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV-LAG 158 (340)
T ss_pred CEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH-Hcc
Confidence 999884210 00 00112468999999999999999999999854 45677888888876 445
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEe
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFD 220 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid 220 (284)
..+|++++|.| +|.+|.+++++|+.+ |.+ ++++..++++.+.++++|.+.+++.....+.+ . .+++|++||
T Consensus 159 ~~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld 236 (340)
T TIGR00692 159 PISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE 236 (340)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence 67999999976 799999999999996 886 87887788899988999988888765443221 1 357999999
Q ss_pred CCCC---cHHHHHhhccCCEEEEEcCCCCCCc-----------eeEEE---eccHHHHHHHHHHHHCCCee--Eeecccc
Q 023273 221 AVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----------SSFVL---TSDGSILEKLNPYFESGKVK--AIIDPKG 281 (284)
Q Consensus 221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~g~i~--~~i~~~~ 281 (284)
++|+ ...++++|+++|+++.+|....... +.+.. ....+.+.++++++++|.++ +.+.+++
T Consensus 237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 316 (340)
T TIGR00692 237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKF 316 (340)
T ss_pred CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence 9874 4778999999999999986421111 11111 12346678899999999986 4566666
Q ss_pred cC
Q 023273 282 LL 283 (284)
Q Consensus 282 ~~ 283 (284)
|+
T Consensus 317 ~l 318 (340)
T TIGR00692 317 KF 318 (340)
T ss_pred eH
Confidence 53
No 112
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7e-29 Score=217.47 Aligned_cols=270 Identities=43% Similarity=0.645 Sum_probs=211.6
Q ss_pred EEcccCCCccc-eEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 023273 5 VYKEYGNSQSV-LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQVKKF 82 (284)
Q Consensus 5 ~~~~~g~~~~~-~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~ 82 (284)
+++..++..+. ++++ +.+.|.|.++||+|++.++++|++|.+...|.++.. ....|..+|||++|+|+++|+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~ 80 (319)
T cd08267 2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF 80 (319)
T ss_pred eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence 44555655222 2777 778888999999999999999999999887764211 12346689999999999999999999
Q ss_pred CCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEcCCc
Q 023273 83 KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAG 161 (284)
Q Consensus 83 ~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~ga~g 161 (284)
++||+|++.... ...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++. ..++.++++|+|+|++|
T Consensus 81 ~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g 154 (319)
T cd08267 81 KVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG 154 (319)
T ss_pred CCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 999999986421 12589999999999999999999999999999999999999985 45689999999999889
Q ss_pred hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc---cCCCcccEEEeCCCC--c--HHHHHhhcc
Q 023273 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--C--DKALKAVKE 234 (284)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~d~vid~~g~--~--~~~~~~l~~ 234 (284)
++|++++++|+.+ |+++++++.+ ++.+.++++|.+.+++.....+. ...+++|++++|+|+ . ...+..+++
T Consensus 155 ~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~ 232 (319)
T cd08267 155 GVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP 232 (319)
T ss_pred HHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCC
Confidence 9999999999996 9999988865 88888899998777776544331 224579999999983 2 333334999
Q ss_pred CCEEEEEcCCCCCCc--e------------eE---EEeccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 235 GGRVVSIIGSVTPPA--S------------SF---VLTSDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 235 ~G~~v~~g~~~~~~~--~------------~~---~~~~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+|+++.+|....... . .+ ......+.+.+++++++++.+++.++++|++
T Consensus 233 ~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 298 (319)
T cd08267 233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPL 298 (319)
T ss_pred CCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcH
Confidence 999999986532110 0 00 1112367899999999999999888888774
No 113
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=1.1e-29 Score=211.03 Aligned_cols=244 Identities=28% Similarity=0.376 Sum_probs=196.0
Q ss_pred cceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCC-CCCcccccce----eEEEEEeCCCCCCCCCCCEE
Q 023273 14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDV----AGVVEKVGSQVKKFKVGDEV 88 (284)
Q Consensus 14 ~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~-~~p~~~G~e~----~G~V~~vG~~~~~~~~Gd~V 88 (284)
+.++++ +.+.|+|++|||++|.+|.+++|.. +|++...+. ..|..+|-.+ +|+|++ |+..+|++||.|
T Consensus 25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V 97 (340)
T COG2130 25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIV 97 (340)
T ss_pred CCceeE-eccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEE
Confidence 458999 8999999999999999999999953 444332222 3445566554 455554 778899999999
Q ss_pred EEecCccccCCCCCCCceeeEEeeecCceeeCCCCC-CH-HhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHH
Q 023273 89 YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNL-SF-VEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGT 165 (284)
Q Consensus 89 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-~~-~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~ 165 (284)
.+. .+|++|...+.+.+.++++.. ++ .....+.++..|||.++ +.+.+++|++|+|.+|+|++|.
T Consensus 98 ~~~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGs 165 (340)
T COG2130 98 VGV------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGS 165 (340)
T ss_pred Eec------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccch
Confidence 884 589999999999999998653 22 33345688889999998 6899999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccC-----CCcccEEEeCCCC--cHHHHHhhccCCE
Q 023273 166 MVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGR 237 (284)
Q Consensus 166 ~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~ 237 (284)
.+.|+||. .|++|+.+..++||++++++ +|.+.++|++.+++.+. ++|+|++||++|+ +++.+..|+.++|
T Consensus 166 vvgQiAKl-kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aR 244 (340)
T COG2130 166 VVGQIAKL-KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFAR 244 (340)
T ss_pred HHHHHHHh-hCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccc
Confidence 99999998 59999999999999999987 99999999998876653 7899999999996 6999999999999
Q ss_pred EEEEcCCC---C------CCceeE-----------EEec----c-HHHHHHHHHHHHCCCeeEee
Q 023273 238 VVSIIGSV---T------PPASSF-----------VLTS----D-GSILEKLNPYFESGKVKAII 277 (284)
Q Consensus 238 ~v~~g~~~---~------~~~~~~-----------~~~~----~-~~~~~~~~~~~~~g~i~~~i 277 (284)
++.||.-+ . ++.+.+ ...+ + .+.++++.+|+++|+|+..-
T Consensus 245 i~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e 309 (340)
T COG2130 245 IPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE 309 (340)
T ss_pred eeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe
Confidence 99997632 1 111111 1101 2 37889999999999998764
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=9e-29 Score=216.91 Aligned_cols=270 Identities=35% Similarity=0.510 Sum_probs=216.6
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++.+..++.+ ..+++. +.+.+.+++++++|++.++++|++|.....+.++.. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~ 77 (325)
T TIGR02824 1 MKAIEITEPGGP-EVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVS 77 (325)
T ss_pred CceEEEccCCCc-ccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCC
Confidence 899999887765 556776 566667899999999999999999999887765321 23467899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
++++||+|++... .|+|++|+.++.+.++++|+++++.+++.+++++.|+|+++ ...++.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~ 148 (325)
T TIGR02824 78 RWKVGDRVCALVA---------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGG 148 (325)
T ss_pred CCCCCCEEEEccC---------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 9999999998642 48999999999999999999999989999999999999987 5788999999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----C-CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----L-PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~-~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|++|.+++++++.. |++++++.+++++.+.++++|.+.+++.....+.. . .+++|++++++|+ ...++++
T Consensus 149 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 227 (325)
T TIGR02824 149 ASGIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA 227 (325)
T ss_pred cchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence 999999999999995 99999999999988888888877776654332211 1 3579999999885 4788999
Q ss_pred hccCCEEEEEcCCCC-----------CCceeEEE---ec---------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVT-----------PPASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~-----------~~~~~~~~---~~---------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.++.... .+...+.. .. ....+.+++++++++.+++.+++.|++
T Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 302 (325)
T TIGR02824 228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPL 302 (325)
T ss_pred hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeH
Confidence 999999999975431 11111111 01 123456778899999988777776653
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=4.3e-29 Score=216.97 Aligned_cols=251 Identities=32% Similarity=0.493 Sum_probs=207.0
Q ss_pred CCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCC
Q 023273 24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN 103 (284)
Q Consensus 24 ~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~ 103 (284)
.|.+.+++++|++.++++|++|+....+.++. ...+|.++|+|++|+|+++|+++.++++||+|++... ..+
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~ 73 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM 73 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence 46788999999999999999999998886542 2345788999999999999999999999999998752 236
Q ss_pred CceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (284)
Q Consensus 104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~ 183 (284)
|+|++|+.++.+.++++|+++++.+++.++..+.|||+++...++++|++++|+++++.+|.+++++++.+ |+++++++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence 89999999999999999999999999999999999999998889999999999999999999999999996 99999999
Q ss_pred CChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC--C-----
Q 023273 184 SSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P----- 248 (284)
Q Consensus 184 ~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~----- 248 (284)
+++++.+.++++|.+.+++....++.. . .+++|+++|++++ ...++++++++|+++.++..... .
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 232 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS 232 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence 999999999999988888765433221 1 3579999999874 47889999999999998754311 1
Q ss_pred ----ceeEE---Ee----c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 249 ----ASSFV---LT----S----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 249 ----~~~~~---~~----~----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
...+. +. . ..+.+.++++++.+|.+++.+.+.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 282 (303)
T cd08251 233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPF 282 (303)
T ss_pred HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcH
Confidence 11111 10 0 124578888999999998877777764
No 116
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=1.4e-29 Score=218.71 Aligned_cols=219 Identities=22% Similarity=0.250 Sum_probs=173.1
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEecC----ccc--------------cCC-------CCCCCceeeEEe
Q 023273 63 IPGYDVAGVVEKVGSQVK------KFKVGDEVYGDIN----EKA--------------LDH-------PKRNGSLAEYTA 111 (284)
Q Consensus 63 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~----~~~--------------~~~-------~~~~g~~~~~~~ 111 (284)
++|||++|+|+++|++++ ++++||||+..+. .+. ..+ ...+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999998 8999999976431 100 000 113699999999
Q ss_pred eecC-ceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhH
Q 023273 112 VEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKL 189 (284)
Q Consensus 112 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~ 189 (284)
+|++ .++++|+++++++++.+++.+.|+|++++.....++++|+|+| +|++|++++++|+.+ |++ |++++++++|.
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence 9997 7999999999999999998999999999777777999999998 699999999999996 876 88888899999
Q ss_pred HHHHHcCCcEEeeCCCcc--cccC--CCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC--CCCcee---------
Q 023273 190 DLLRSLGADLAIDYTKEN--IEDL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV--TPPASS--------- 251 (284)
Q Consensus 190 ~~~~~~g~~~~~~~~~~~--~~~~--~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~--~~~~~~--------- 251 (284)
+.++++|++.+++.+... ..+. ..++|++||++|+ .+.++++++++|+++.+|... .+..++
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~ 238 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL 238 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence 999999998888764321 1111 3579999999985 478999999999999998643 121111
Q ss_pred -E--EEeccHHHHHHHHHHHHCC--Ce--eEeecccccC
Q 023273 252 -F--VLTSDGSILEKLNPYFESG--KV--KAIIDPKGLL 283 (284)
Q Consensus 252 -~--~~~~~~~~~~~~~~~~~~g--~i--~~~i~~~~~~ 283 (284)
+ +.....+++++++++++++ ++ +++|+++|||
T Consensus 239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l 277 (280)
T TIGR03366 239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL 277 (280)
T ss_pred EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc
Confidence 1 1122467899999999974 43 4679999987
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.1e-28 Score=214.84 Aligned_cols=275 Identities=33% Similarity=0.451 Sum_probs=217.5
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 80 (284)
||++++...+.+ ..+++. +.+.|.+.+++++|++.++++|++|.....|.++.. ...|..+|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~ 77 (328)
T cd08268 1 MRAVRFHQFGGP-EVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVT 77 (328)
T ss_pred CeEEEEeccCCc-ceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCC
Confidence 899999987765 457777 677778899999999999999999998877765322 24467899999999999999999
Q ss_pred CCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 023273 81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG 159 (284)
Q Consensus 81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga 159 (284)
+|++||+|++++.. .....|++++|+.++.+.++++|++++..+++.+++.+.++|+++ ....+.++++++|+|+
T Consensus 78 ~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~ 153 (328)
T cd08268 78 GFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAA 153 (328)
T ss_pred cCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 99999999987421 112358999999999999999999999999999999999999998 4678889999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHh
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA 231 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~ 231 (284)
+|.+|++++++++.. |+++++++.++++.+.++++|.+.+++.+...+.. . .+++|++++++|+ ...++++
T Consensus 154 ~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~ 232 (328)
T cd08268 154 SSSVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA 232 (328)
T ss_pred ccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence 999999999999995 99999999999999988888887777765433221 1 3479999999885 4788999
Q ss_pred hccCCEEEEEcCCCCC-----------CceeEEE---e---c----cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 232 VKEGGRVVSIIGSVTP-----------PASSFVL---T---S----DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~---~----~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
++++|+++.+|....+ .+..+.. . . ....++.+.+++.++.+++.+.++|++
T Consensus 233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (328)
T cd08268 233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPF 305 (328)
T ss_pred hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcH
Confidence 9999999998754211 1111111 0 0 123455666677888888777677664
No 118
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=3e-28 Score=214.85 Aligned_cols=265 Identities=28% Similarity=0.328 Sum_probs=204.8
Q ss_pred eEEEEcccCC---CccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCC-CCCCCCcccccceeEEEEEeCC
Q 023273 2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGS 77 (284)
Q Consensus 2 ~a~~~~~~g~---~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~ 77 (284)
|++++...++ ....++++ +.+.|++.+++|+|++.++++|++|.....+.... .+...+.++|+|++|+|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred cEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 5677765552 22568998 88999999999999999999999887655443111 1122346789999999999996
Q ss_pred CCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeec-CceeeCCCCCC--HHhhhc-ccchHHHHHHHH-HhcccCCCC
Q 023273 78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKPKNLS--FVEAAS-LPLATETAYEGL-ERSAFSAGK 152 (284)
Q Consensus 78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al-~~~~~~~g~ 152 (284)
+ ++++||+|+++ ++|++|+.++. +.++++|++++ ..++++ +++++.|||+++ ....+.+++
T Consensus 82 ~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~ 147 (329)
T cd05288 82 P--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGE 147 (329)
T ss_pred C--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCC
Confidence 4 79999999873 47999999999 99999999984 445555 888999999998 457889999
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCccccc-----CCCcccEEEeCCCC--
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ-- 224 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~-- 224 (284)
+|+|+|++|.+|++++++|+.. |++++++++++++.+.+++ +|.+.+++.+..++.. ..+++|++|||+|+
T Consensus 148 ~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~ 226 (329)
T cd05288 148 TVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEI 226 (329)
T ss_pred EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHH
Confidence 9999999999999999999995 9999999999999999988 8988888876533221 13579999999986
Q ss_pred cHHHHHhhccCCEEEEEcCCCCCC----------------ceeEEE---ecc----HHHHHHHHHHHHCCCeeEeecccc
Q 023273 225 CDKALKAVKEGGRVVSIIGSVTPP----------------ASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKG 281 (284)
Q Consensus 225 ~~~~~~~l~~~G~~v~~g~~~~~~----------------~~~~~~---~~~----~~~~~~~~~~~~~g~i~~~i~~~~ 281 (284)
...++++++++|+++.+|...... ...+.. ... .+.+.++++++.+|.+++...+++
T Consensus 227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 306 (329)
T cd05288 227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVE 306 (329)
T ss_pred HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccc
Confidence 478899999999999997543110 111111 111 256788999999999887644444
Q ss_pred c
Q 023273 282 L 282 (284)
Q Consensus 282 ~ 282 (284)
+
T Consensus 307 ~ 307 (329)
T cd05288 307 G 307 (329)
T ss_pred c
Confidence 4
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=1.3e-27 Score=209.28 Aligned_cols=269 Identities=40% Similarity=0.554 Sum_probs=216.1
Q ss_pred CeEEEEcccCCCccceEEeccccCCCCC-CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 023273 1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79 (284)
Q Consensus 1 m~a~~~~~~g~~~~~~~~~~~~~~~~~~-~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 79 (284)
||++++..++.. ..+++. +.+ |.+. +++++|++.++++|++|+....|.+.. ....|..+|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~ 76 (323)
T cd08241 1 MKAVVCKELGGP-EDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGV 76 (323)
T ss_pred CeEEEEecCCCc-ceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCC
Confidence 899999877665 457777 666 6666 599999999999999999988776531 12345679999999999999999
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH-hcccCCCCEEEEEc
Q 023273 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG 158 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g 158 (284)
.++++||+|+++.. .|+|++|+.++.+.++++|++++..+++.+..++.+||+++. ..++.++++++|+|
T Consensus 77 ~~~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g 147 (323)
T cd08241 77 TGFKVGDRVVALTG---------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLG 147 (323)
T ss_pred CCCCCCCEEEEecC---------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 99999999999751 589999999999999999999998888888889999999984 68899999999999
Q ss_pred CCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHH
Q 023273 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALK 230 (284)
Q Consensus 159 a~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~ 230 (284)
++|.+|++++++++.. |++++.++.++++.+.++++|.+.+++....++.. . .+++|++++++|+ ...+++
T Consensus 148 ~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~ 226 (323)
T cd08241 148 AAGGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLR 226 (323)
T ss_pred CCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence 8899999999999995 99999999999999999888887777765433322 1 3579999999985 478899
Q ss_pred hhccCCEEEEEcCCCCCC-----------ceeEEEe---c--------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 231 AVKEGGRVVSIIGSVTPP-----------ASSFVLT---S--------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 231 ~l~~~G~~v~~g~~~~~~-----------~~~~~~~---~--------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+++++|+++.++...... ...+... . ..+.++++++++.++.+++.+++.|++
T Consensus 227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (323)
T cd08241 227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPL 301 (323)
T ss_pred hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcH
Confidence 999999999987532111 1111110 0 135678899999999998777776653
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=4.3e-27 Score=207.69 Aligned_cols=268 Identities=34% Similarity=0.477 Sum_probs=208.7
Q ss_pred eEEEEcccCCCccceEEeccccCCCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 023273 2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81 (284)
Q Consensus 2 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 81 (284)
|++.+...+.+ ..+.+. +.+.|+|.+++++|++.++++|++|.....|.++. ....|..+|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~ 77 (337)
T cd08275 1 RAVVLTGFGGL-DKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKD 77 (337)
T ss_pred CeEEEcCCCCc-cceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcC
Confidence 56777776664 457887 66777889999999999999999999988776532 1244678999999999999999999
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA 160 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~ 160 (284)
+++||+|++... +|+|++|+.++.+.++++|+++++.+++.+++++.++|+++ +..+++++++|+|+|++
T Consensus 78 ~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 148 (337)
T cd08275 78 FKVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA 148 (337)
T ss_pred CCCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence 999999999752 58999999999999999999999999998999999999998 56889999999999988
Q ss_pred chHHHHHHHHHHHhcCCeEEEEe-CChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC--cHHHHHhh
Q 023273 161 GGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 161 g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~--~~~~~~~l 232 (284)
|.+|++++++|+.+ . .+.++. .++++.+.++++|.+.+++.....+.. ..+++|+++|++|+ ...+++++
T Consensus 149 g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l 226 (337)
T cd08275 149 GGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL 226 (337)
T ss_pred chHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence 99999999999984 2 223332 245577888888887777765433211 24579999999985 47889999
Q ss_pred ccCCEEEEEcCCCCC---------------------------CceeEE---Ee---c----cHHHHHHHHHHHHCCCeeE
Q 023273 233 KEGGRVVSIIGSVTP---------------------------PASSFV---LT---S----DGSILEKLNPYFESGKVKA 275 (284)
Q Consensus 233 ~~~G~~v~~g~~~~~---------------------------~~~~~~---~~---~----~~~~~~~~~~~~~~g~i~~ 275 (284)
+++|+++.+|..... .+..+. +. . ....+.++++++.++.+++
T Consensus 227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd08275 227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP 306 (337)
T ss_pred ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence 999999999765311 011110 00 0 1235778889999999888
Q ss_pred eecccccC
Q 023273 276 IIDPKGLL 283 (284)
Q Consensus 276 ~i~~~~~~ 283 (284)
.++++|++
T Consensus 307 ~~~~~~~~ 314 (337)
T cd08275 307 KIDSVFPF 314 (337)
T ss_pred ceeeEEcH
Confidence 77777664
No 121
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.96 E-value=4.1e-27 Score=201.36 Aligned_cols=212 Identities=40% Similarity=0.566 Sum_probs=177.7
Q ss_pred eEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCc--------------cc
Q 023273 31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE--------------KA 96 (284)
Q Consensus 31 ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~--------------~~ 96 (284)
||+|++.++++|++|...+.|.++ ....+|.++|||++|+|+++|++++.|++||+|++.... ..
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 79 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG 79 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence 689999999999999999888653 223457889999999999999999999999999987521 11
Q ss_pred cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHhc
Q 023273 97 LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175 (284)
Q Consensus 97 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~-~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~ 175 (284)
..+....|+|++|+.++.+.++++|+++++++++.++.++.|||+++.. ..+.++++|+|+|+++ +|++++++++..
T Consensus 80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~- 157 (271)
T cd05188 80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA- 157 (271)
T ss_pred EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-
Confidence 1222346899999999999999999999999999999999999999954 5558999999999766 999999999995
Q ss_pred CCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-----CCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCCC
Q 023273 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 176 g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~ 245 (284)
|.+++++++++++.+.+++++.+.++++....... ..+++|++|++++. ...++++|+++|+++.++...
T Consensus 158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 89999999999999999999888877765443322 14679999999986 378899999999999998654
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=9.3e-27 Score=200.60 Aligned_cols=239 Identities=33% Similarity=0.427 Sum_probs=196.5
Q ss_pred CeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeE
Q 023273 30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109 (284)
Q Consensus 30 ~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~ 109 (284)
+|++|++.++++|++|++...|.++ ..|.++|||++|+|+++|+++..+++||+|++.. .|+|++|
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~ 66 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH 66 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence 5899999999999999998877542 3467899999999999999999999999999864 5899999
Q ss_pred EeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 110 TAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 110 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
+.++.+.++++|++++..+++.+++++.++|.++ +..++++|++|+|+|++|.+|++++++++.+ |+++++++.++++
T Consensus 67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~ 145 (293)
T cd05195 67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEK 145 (293)
T ss_pred EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHH
Confidence 9999999999999999999999999999999998 5688999999999998999999999999995 9999999999999
Q ss_pred HHHHHHcC--CcEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCCC--Cc-------
Q 023273 189 LDLLRSLG--ADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--PA------- 249 (284)
Q Consensus 189 ~~~~~~~g--~~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~~------- 249 (284)
.+.+++++ .+.+++.....+.. . .+++|++++++|+ ...++++++++|+++.++..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 225 (293)
T cd05195 146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFL 225 (293)
T ss_pred HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhc
Confidence 99998887 56677765433221 1 4579999999986 58899999999999998765321 01
Q ss_pred --eeEEEe-----------ccHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 250 --SSFVLT-----------SDGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 250 --~~~~~~-----------~~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
..+... ...+.+++++++++++++++.+++.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (293)
T cd05195 226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPS 272 (293)
T ss_pred cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeech
Confidence 111110 0134678899999999998877766654
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=5.5e-26 Score=195.62 Aligned_cols=234 Identities=33% Similarity=0.462 Sum_probs=190.9
Q ss_pred EEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeee
Q 023273 34 IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE 113 (284)
Q Consensus 34 V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~ 113 (284)
|++.++++|++|.+...|.++ .|.++|||++|+|+.+|++++.|++||+|++.. .|+|++|+.++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~ 66 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD 66 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence 789999999999999887642 357899999999999999999999999999875 48999999999
Q ss_pred cCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 114 ENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 114 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.++++|+++++.+++.+++++.++|+++ +...+.+|++|+|+|++|.+|++++++++.. |++++++++++++.+.+
T Consensus 67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~ 145 (288)
T smart00829 67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFL 145 (288)
T ss_pred HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999998 6788999999999999999999999999995 99999999999999999
Q ss_pred HHcCC--cEEeeCCCccccc----C--CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCCC--CC---------cee
Q 023273 193 RSLGA--DLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--PP---------ASS 251 (284)
Q Consensus 193 ~~~g~--~~~~~~~~~~~~~----~--~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~~--~~---------~~~ 251 (284)
+++|. +.++++....+.+ . .+++|+++|++|+ ...++++++++|+++.+|.... .. ...
T Consensus 146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (288)
T smart00829 146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVS 225 (288)
T ss_pred HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCce
Confidence 99987 6677665433222 1 3479999999885 4778999999999999875431 11 111
Q ss_pred EEEec----------cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 252 FVLTS----------DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 252 ~~~~~----------~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
+.... ..+.+.+++++++++.+++...+.|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (288)
T smart00829 226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPI 267 (288)
T ss_pred EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcH
Confidence 11100 124577888899999887765566653
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.93 E-value=2.1e-24 Score=185.99 Aligned_cols=210 Identities=32% Similarity=0.395 Sum_probs=171.3
Q ss_pred CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchH
Q 023273 57 DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136 (284)
Q Consensus 57 ~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 136 (284)
+.++|.++|||++|+|+++|++++++++||+|++. +.|++|+.++.+.++++|++++..+++.+ +++
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~ 83 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALA 83 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHH
Confidence 45678999999999999999999999999999985 35899999999999999999998888888 788
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHHHcC-CcEEeeCCCcccccCCCc
Q 023273 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEK 214 (284)
Q Consensus 137 ~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~ 214 (284)
.|||+++...++.++++++|+| +|.+|++++++|+.+ |.+ ++++++++++.+.++++| .+.+++..... ...++
T Consensus 84 ~ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~ 159 (277)
T cd08255 84 ATALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRG 159 (277)
T ss_pred HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCC
Confidence 9999998888999999999997 799999999999996 888 999999999999889998 55555433211 12457
Q ss_pred ccEEEeCCCC---cHHHHHhhccCCEEEEEcCCCCC----------CceeEEE---ec-----------cHHHHHHHHHH
Q 023273 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL---TS-----------DGSILEKLNPY 267 (284)
Q Consensus 215 ~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~---~~-----------~~~~~~~~~~~ 267 (284)
+|++||+++. ...++++++++|+++.+|..... ....+.. .. ..+.+++++++
T Consensus 160 ~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 239 (277)
T cd08255 160 ADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDL 239 (277)
T ss_pred CCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHH
Confidence 9999999874 47889999999999999865321 0111111 00 12578999999
Q ss_pred HHCCCeeEeecccccC
Q 023273 268 FESGKVKAIIDPKGLL 283 (284)
Q Consensus 268 ~~~g~i~~~i~~~~~~ 283 (284)
+++|.+++.+.++||+
T Consensus 240 ~~~~~l~~~~~~~~~~ 255 (277)
T cd08255 240 LAEGRLEALITHRVPF 255 (277)
T ss_pred HHcCCccccccCccCH
Confidence 9999998888888774
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.91 E-value=6e-22 Score=164.55 Aligned_cols=236 Identities=28% Similarity=0.371 Sum_probs=181.2
Q ss_pred CCCCCCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEecCccccCCC
Q 023273 25 PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG----YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP 100 (284)
Q Consensus 25 ~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~ 100 (284)
.++++++++|+.+|.+..|.....+....+.. --.|..+| ..++|+|++ |+.++|++||.|.+..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~-y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~-------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD-YAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV-------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCccc-ccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence 45689999999999999998776654432221 11222333 367899988 6778999999998864
Q ss_pred CCCCceeeEEeeecC--ceeeCCC--CCCHHhhh-cccchHHHHHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHh
Q 023273 101 KRNGSLAEYTAVEEN--LLALKPK--NLSFVEAA-SLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV 174 (284)
Q Consensus 101 ~~~g~~~~~~~~~~~--~~~~ip~--~~~~~~aa-~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~ 174 (284)
+|.+|.+++.. ..++++. +.++.... .+.++.+|||-.+ +...++.|++|+|.||+|.+|..+.|+|+.+
T Consensus 102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~ 177 (343)
T KOG1196|consen 102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM 177 (343)
T ss_pred ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence 69999999764 3345443 45554444 4588899999998 6899999999999999999999999999997
Q ss_pred cCCeEEEEeCChhhHHHHH-HcCCcEEeeCCCc-ccccC-----CCcccEEEeCCCC--cHHHHHhhccCCEEEEEcCCC
Q 023273 175 FGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 175 ~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-----~~~~d~vid~~g~--~~~~~~~l~~~G~~v~~g~~~ 245 (284)
||+|+....++||...++ ++|.+..+|+..+ +..+. ++|+|+.||++|+ +++.+..|+..||+++||.-+
T Consensus 178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS 256 (343)
T KOG1196|consen 178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS 256 (343)
T ss_pred -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence 999999999999999996 6789999999876 33332 7899999999997 689999999999999998643
Q ss_pred -----CCCc---eeE-----------EE----eccHHHHHHHHHHHHCCCeeEe
Q 023273 246 -----TPPA---SSF-----------VL----TSDGSILEKLNPYFESGKVKAI 276 (284)
Q Consensus 246 -----~~~~---~~~-----------~~----~~~~~~~~~~~~~~~~g~i~~~ 276 (284)
.+.. +.. .. ....+.++++.+++++|+|+..
T Consensus 257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ 310 (343)
T KOG1196|consen 257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV 310 (343)
T ss_pred hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence 1111 110 00 0125678999999999999764
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.88 E-value=2.6e-22 Score=189.78 Aligned_cols=248 Identities=22% Similarity=0.288 Sum_probs=195.5
Q ss_pred cceEEeccccCC---CCCCCeEEEEEeEeecCHHHHHHHcCCCCC-----CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 023273 14 SVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSA-----TDSPLPTIPGYDVAGVVEKVGSQVKKFKVG 85 (284)
Q Consensus 14 ~~~~~~~~~~~~---~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 85 (284)
+.++|. +.|.. +..++.=+-.|.|+.+|..|+....|+++. ......+++|-|++|+-. -|
T Consensus 1427 sSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~G 1495 (2376)
T KOG1202|consen 1427 SSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SG 1495 (2376)
T ss_pred cceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccC----------CC
Confidence 445665 44533 335666678899999999999999998643 344566899999988654 49
Q ss_pred CEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHH-HhcccCCCCEEEEEcCCchHH
Q 023273 86 DEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVG 164 (284)
Q Consensus 86 d~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~ga~g~~G 164 (284)
.||++..+ .-+.++.+..+.+.+|.+|.+..+++|+.+|+.+.|+|+++ .++..++|+++||++++|++|
T Consensus 1496 rRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVG 1566 (2376)
T KOG1202|consen 1496 RRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVG 1566 (2376)
T ss_pred cEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchh
Confidence 99999875 56788899999999999999999999999999999999999 679999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCccccc------CCCcccEEEeCCCC--cHHHHHhh
Q 023273 165 TMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV 232 (284)
Q Consensus 165 ~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~------~~~~~d~vid~~g~--~~~~~~~l 232 (284)
.+|+.+|.++ |++|+.++.+.||++++.. +..+++-|+++.+++. .++|+|+|++.... +++.++||
T Consensus 1567 QAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCL 1645 (2376)
T KOG1202|consen 1567 QAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCL 1645 (2376)
T ss_pred HHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHH
Confidence 9999999996 9999999999999998853 3345566666655544 27799999998875 68999999
Q ss_pred ccCCEEEEEcCCCCCC-----------ceeEE-------EeccHHHHHHHHHHH----HCCCeeEeeccccc
Q 023273 233 KEGGRVVSIIGSVTPP-----------ASSFV-------LTSDGSILEKLNPYF----ESGKVKAIIDPKGL 282 (284)
Q Consensus 233 ~~~G~~v~~g~~~~~~-----------~~~~~-------~~~~~~~~~~~~~~~----~~g~i~~~i~~~~~ 282 (284)
+.+|||..+|-....+ +.+|+ +...-+++.++.+++ ++|..+|..+++|+
T Consensus 1646 a~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~ 1717 (2376)
T KOG1202|consen 1646 ALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFH 1717 (2376)
T ss_pred HhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceecccccccc
Confidence 9999999998764222 22222 122345566666655 45678888887775
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.75 E-value=8.7e-18 Score=124.45 Aligned_cols=91 Identities=33% Similarity=0.395 Sum_probs=73.8
Q ss_pred CCeEEEEEeEeecCHHHHHHHcCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEecC---------------
Q 023273 29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN--------------- 93 (284)
Q Consensus 29 ~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~--------------- 93 (284)
||||+|||++++||++|++.+.|. .......|.++|||++|+|+++|+++++|++||+|+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~-~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGG-PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTS-SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhc-cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence 689999999999999999999984 2234578999999999999999999999999999988542
Q ss_pred ---ccccCCCCCCCceeeEEeeecCceeeC
Q 023273 94 ---EKALDHPKRNGSLAEYTAVEENLLALK 120 (284)
Q Consensus 94 ---~~~~~~~~~~g~~~~~~~~~~~~~~~i 120 (284)
.....+...+|+|++|+++|++.++++
T Consensus 80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 111234557899999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.44 E-value=1e-12 Score=100.18 Aligned_cols=108 Identities=33% Similarity=0.473 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccC------CCcccEEEeCCCC---cHHHHHhh
Q 023273 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ---CDKALKAV 232 (284)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~d~vid~~g~---~~~~~~~l 232 (284)
++|++++++|+.+ |++|++++++++|++.++++|++++++++..++.+. .+++|++|||+|+ .+.+++++
T Consensus 1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 5899999999996 899999999999999999999999999987654332 2479999999995 58999999
Q ss_pred ccCCEEEEEcCCC-CCCcee------------EEEeccHHHHHHHHHHHHC
Q 023273 233 KEGGRVVSIIGSV-TPPASS------------FVLTSDGSILEKLNPYFES 270 (284)
Q Consensus 233 ~~~G~~v~~g~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~ 270 (284)
+++|+++++|.+. .+..++ .+....+++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999887 222221 1223356899999998863
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.97 E-value=6.6e-09 Score=95.76 Aligned_cols=95 Identities=21% Similarity=0.360 Sum_probs=78.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCcc-------------c-----
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-------------I----- 208 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-------------~----- 208 (284)
..++++|+|+| +|++|+++++.|+.+ |++|++++.+++++++++++|++.+ +|..++. +
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 46899999999 899999999999996 8899999999999999999998844 5543211 0
Q ss_pred ---ccCCCcccEEEeCCCC---------cHHHHHhhccCCEEEEEcCC
Q 023273 209 ---EDLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 209 ---~~~~~~~d~vid~~g~---------~~~~~~~l~~~G~~v~~g~~ 244 (284)
.+..+++|++|+|+|. .+++++.++++|+++.++..
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 0112579999999984 27899999999999999864
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.92 E-value=1e-08 Score=92.30 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=93.0
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-- 225 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-- 225 (284)
..+|++|+|+| .|++|+.+++.++.+ |++|++++.++.|...++.+|++.+ +. .+..+++|+||+|+|+.
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aDVVI~atG~~~~ 270 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGDIFVTTTGNKDI 270 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCCEEEECCCCHHH
Confidence 46899999999 899999999999995 9999999999999999999997533 21 12235789999999963
Q ss_pred -HH-HHHhhccCCEEEEEcCCCCCCce--------eE--EEeccHH-HHH--HHHHHHHCCCe---eEeeccc
Q 023273 226 -DK-ALKAVKEGGRVVSIIGSVTPPAS--------SF--VLTSDGS-ILE--KLNPYFESGKV---KAIIDPK 280 (284)
Q Consensus 226 -~~-~~~~l~~~G~~v~~g~~~~~~~~--------~~--~~~~~~~-~~~--~~~~~~~~g~i---~~~i~~~ 280 (284)
.. .+++++++|+++.+|....+.+. .. +.....+ .++ ..+.++++|++ .+.++|.
T Consensus 271 i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~ 343 (413)
T cd00401 271 ITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHP 343 (413)
T ss_pred HHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCc
Confidence 44 48999999999999865321111 11 1111112 445 68999999988 6668777
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=98.63 E-value=1.2e-08 Score=77.34 Aligned_cols=87 Identities=38% Similarity=0.507 Sum_probs=58.2
Q ss_pred cCCcEEeeCCCcccccCCCcccEEEeCCC--C--c-HHHHHhhccCCEEEEEcCCC-------CCCceeEEEe----c--
Q 023273 195 LGADLAIDYTKENIEDLPEKFDVVFDAVG--Q--C-DKALKAVKEGGRVVSIIGSV-------TPPASSFVLT----S-- 256 (284)
Q Consensus 195 ~g~~~~~~~~~~~~~~~~~~~d~vid~~g--~--~-~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~----~-- 256 (284)
+|+++++|++..++ ...+++|+|||++| . . ..++++| ++|+++.++... ....+...+. .
T Consensus 1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA 78 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence 58899999987666 44689999999999 3 2 5667788 999999998510 1112222211 1
Q ss_pred -cHHHHHHHHHHHHCCCeeEeecccccC
Q 023273 257 -DGSILEKLNPYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 257 -~~~~~~~~~~~~~~g~i~~~i~~~~~~ 283 (284)
..++++++.+++++|+|+|.|+++|||
T Consensus 79 ~~~~~l~~l~~l~~~G~l~~~i~~~f~l 106 (127)
T PF13602_consen 79 IRAEALEELAELVAEGKLKPPIDRVFPL 106 (127)
T ss_dssp HHHHHHHHHHHHHHTTSS---EEEEEEG
T ss_pred hHHHHHHHHHHHHHCCCeEEeeccEECH
Confidence 345699999999999999999999997
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.29 E-value=5.7e-06 Score=76.37 Aligned_cols=93 Identities=23% Similarity=0.436 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-------------c-------
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-------------N------- 207 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~------- 207 (284)
.++++++|+| +|.+|+++++.++.+ |++|++++.++++++.++++|.+.+ ++..++ +
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 4679999999 899999999999996 9999999999999999999997652 232110 0
Q ss_pred -cccCCCcccEEEeCC---CC--c----HHHHHhhccCCEEEEEcC
Q 023273 208 -IEDLPEKFDVVFDAV---GQ--C----DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 208 -~~~~~~~~d~vid~~---g~--~----~~~~~~l~~~G~~v~~g~ 243 (284)
+.+..+++|++|+|+ |. + +.+++.|++++.+|.++.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 111245799999998 53 2 788999999999999854
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.16 E-value=1.9e-05 Score=71.59 Aligned_cols=99 Identities=23% Similarity=0.290 Sum_probs=75.9
Q ss_pred HHHHHHhc-ccC-CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCccc
Q 023273 139 AYEGLERS-AFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD 216 (284)
Q Consensus 139 a~~al~~~-~~~-~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d 216 (284)
.|.++... ++. .|++|+|+| .|.+|..+++.++.+ |.+|++++.++.+...+...|.. +.+ +.+..+++|
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~aD 269 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELGD 269 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCCC
Confidence 45555433 444 899999999 899999999999996 99999999998887777666654 222 222345799
Q ss_pred EEEeCCCCc----HHHHHhhccCCEEEEEcCCC
Q 023273 217 VVFDAVGQC----DKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 217 ~vid~~g~~----~~~~~~l~~~G~~v~~g~~~ 245 (284)
++|+++|+. ...++.|++++.++..|...
T Consensus 270 VVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 270 IFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 999999863 36788999999999887654
No 134
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.10 E-value=2.3e-05 Score=66.55 Aligned_cols=144 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCCCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcC
Q 023273 80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159 (284)
Q Consensus 80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga 159 (284)
..+++|++++..+ +|.+|.. +...++.+++++.+..+. .+.+. .....+. ....++++|+.+|
T Consensus 65 ~p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~-~~~~~~~~VLDiG- 127 (250)
T PRK00517 65 HPIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGT-HPTTR-LCLEALE-KLVLPGKTVLDVG- 127 (250)
T ss_pred CCEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCC-CHHHH-HHHHHHH-hhcCCCCEEEEeC-
Confidence 4477888877654 3555544 666788898888765432 22111 1122222 2256899999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC------cHHHHHhhc
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------CDKALKAVK 233 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~------~~~~~~~l~ 233 (284)
+|. |..++.+++. +..++++++.++...+.+++.....-+. ..-.+......+|+|+.+... .+.+.+.|+
T Consensus 128 cGs-G~l~i~~~~~-g~~~v~giDis~~~l~~A~~n~~~~~~~-~~~~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lk 204 (250)
T PRK00517 128 CGS-GILAIAAAKL-GAKKVLAVDIDPQAVEAARENAELNGVE-LNVYLPQGDLKADVIVANILANPLLELAPDLARLLK 204 (250)
T ss_pred CcH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCC-ceEEEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcC
Confidence 665 8888776664 3446999999999888776532111010 000011111159999876542 267888999
Q ss_pred cCCEEEEEcC
Q 023273 234 EGGRVVSIIG 243 (284)
Q Consensus 234 ~~G~~v~~g~ 243 (284)
++|++++.+.
T Consensus 205 pgG~lilsgi 214 (250)
T PRK00517 205 PGGRLILSGI 214 (250)
T ss_pred CCcEEEEEEC
Confidence 9999997653
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.07 E-value=9.2e-05 Score=64.43 Aligned_cols=91 Identities=19% Similarity=0.372 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD 226 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~ 226 (284)
.+.+++|+| .|.+|+.++..++.+ |++|++.++++++.+.++++|...+ .. ..+.+.-.++|+||+|++. ..
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhH
Confidence 689999999 799999999999995 8999999999988888888886532 21 1223334679999999874 26
Q ss_pred HHHHhhccCCEEEEEcCCC
Q 023273 227 KALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~~ 245 (284)
..++.+++++.++.++...
T Consensus 226 ~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKP 244 (296)
T ss_pred HHHHcCCCCcEEEEEccCC
Confidence 7788899999999886554
No 136
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=0.00011 Score=59.65 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=72.8
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcEEeeCCCccccc-C-CCcc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKENIED-L-PEKF 215 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~-~-~~~~ 215 (284)
+++...++++++||-+| ++.|+.++.+|+.. + +|+.+++.++-.+.+ +.+|..++.-...+-..- . ...|
T Consensus 64 m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPy 139 (209)
T COG2518 64 MLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPY 139 (209)
T ss_pred HHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCc
Confidence 55788999999999999 47799999999984 5 999999988755555 457764432222221111 1 3579
Q ss_pred cEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 216 d~vid~~g~---~~~~~~~l~~~G~~v~~g~~ 244 (284)
|.|+-+.+. ++..++.|+++|+++..-+.
T Consensus 140 D~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG~ 171 (209)
T COG2518 140 DRIIVTAAAPEVPEALLDQLKPGGRLVIPVGS 171 (209)
T ss_pred CEEEEeeccCCCCHHHHHhcccCCEEEEEEcc
Confidence 999887763 68999999999999987553
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.97 E-value=7.7e-05 Score=67.25 Aligned_cols=90 Identities=21% Similarity=0.248 Sum_probs=71.6
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-- 225 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~-- 225 (284)
...|++|+|+| .|.+|+.+++.++.+ |++|++++.++.+...++..|.. +.+. .+.-++.|++|+++|+.
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aDVVItaTG~~~v 263 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGDIFITATGNKDV 263 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCCEEEECCCCHHH
Confidence 46899999999 999999999999995 99999999988887777777763 2221 12235689999999863
Q ss_pred --HHHHHhhccCCEEEEEcCCC
Q 023273 226 --DKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 226 --~~~~~~l~~~G~~v~~g~~~ 245 (284)
...+..+++++.++.+|...
T Consensus 264 I~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 264 IRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred HHHHHHhcCCCCcEEEEECCCC
Confidence 45888999999999887653
No 138
>PLN02494 adenosylhomocysteinase
Probab=97.82 E-value=9.1e-05 Score=67.52 Aligned_cols=88 Identities=20% Similarity=0.235 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---c
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C 225 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~ 225 (284)
..|++|+|+| .|.+|..+++.++.+ |++|++++.++.+...+...|... .+ ..+.-+..|++++++|+ .
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~v-v~-----leEal~~ADVVI~tTGt~~vI 323 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQV-LT-----LEDVVSEADIFVTTTGNKDII 323 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCee-cc-----HHHHHhhCCEEEECCCCccch
Confidence 5799999999 899999999999995 999999999888877777777642 21 22223568999999985 2
Q ss_pred -HHHHHhhccCCEEEEEcCC
Q 023273 226 -DKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 226 -~~~~~~l~~~G~~v~~g~~ 244 (284)
...++.|++++.++.+|.+
T Consensus 324 ~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 324 MVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred HHHHHhcCCCCCEEEEcCCC
Confidence 7799999999999999875
No 139
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.78 E-value=0.00022 Score=61.26 Aligned_cols=97 Identities=22% Similarity=0.275 Sum_probs=66.7
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHc----CCcEE--eeCCCcccccCCCccc
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL----GADLA--IDYTKENIEDLPEKFD 216 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~----g~~~~--~~~~~~~~~~~~~~~d 216 (284)
...++++++||.+| +|+ |..+..+++.. + .++++++.+++.++.+++. +...+ +..+...+....+.+|
T Consensus 72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD 148 (272)
T PRK11873 72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVD 148 (272)
T ss_pred hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCcee
Confidence 46788999999999 666 88888888764 4 3699999999998888753 32221 1111111111135799
Q ss_pred EEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
+|+.+.. + ++.+.+.|+++|++++.+..
T Consensus 149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 9986531 2 37899999999999987543
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.78 E-value=6.7e-05 Score=65.81 Aligned_cols=106 Identities=23% Similarity=0.251 Sum_probs=73.8
Q ss_pred CceeeCCCCCCHHhhhcccchHHHHHHHHHhccc----CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-
Q 023273 115 NLLALKPKNLSFVEAASLPLATETAYEGLERSAF----SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL- 189 (284)
Q Consensus 115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~----~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~- 189 (284)
...+++|+.+..+.++... +...++.+++.+.. .++++|+|+| +|.+|..+++.++..++.+++++.+++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3566778888877766652 33456667754332 4799999999 799999999998874346788889988875
Q ss_pred HHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc
Q 023273 190 DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC 225 (284)
Q Consensus 190 ~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 225 (284)
+.++++|.. +++.+ ++.+....+|+||.|++.+
T Consensus 217 ~la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~~ 249 (311)
T cd05213 217 ELAKELGGN-AVPLD--ELLELLNEADVVISATGAP 249 (311)
T ss_pred HHHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCCC
Confidence 566777763 33321 2233335689999999964
No 141
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.74 E-value=0.0012 Score=57.18 Aligned_cols=167 Identities=16% Similarity=0.111 Sum_probs=103.2
Q ss_pred EEEEEeCCCCCCCCCCCEEEEecCccc------------------cCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhc
Q 023273 70 GVVEKVGSQVKKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS 131 (284)
Q Consensus 70 G~V~~vG~~~~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 131 (284)
++|++ |.++++.+|+||+++.+-.. .+.....-.|.+|.++..+..+. | -....-++
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-~--~~e~~~~L 113 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-P--EREDWQML 113 (314)
T ss_pred EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-c--chhHHHHH
Confidence 66666 89999999999999874211 01222334566666665554431 1 11223344
Q ss_pred ccchHHHHHHHHHh---cccCCCCEEEEEcCCchHHHHHHHHHH-HhcCCeEEEEeCChhhHHHHHHcC-CcEEeeCCCc
Q 023273 132 LPLATETAYEGLER---SAFSAGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKE 206 (284)
Q Consensus 132 ~~~~~~ta~~al~~---~~~~~g~~vlI~ga~g~~G~~a~~~a~-~~~g~~vi~~~~~~~~~~~~~~~g-~~~~~~~~~~ 206 (284)
+...+.|+|..-+. .+.-..+.|+|.+|++.+++..+.+++ ...+.+++.+++ +.+..+.+.+| .+.++.|++
T Consensus 114 lrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS-~~N~~Fve~lg~Yd~V~~Yd~- 191 (314)
T PF11017_consen 114 LRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTS-ARNVAFVESLGCYDEVLTYDD- 191 (314)
T ss_pred HHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEec-CcchhhhhccCCceEEeehhh-
Confidence 44466788865432 334556789999999999999999888 323567776665 45556788888 577777753
Q ss_pred ccccC-CCcccEEEeCCCCc---HHHHHhhccCC-EEEEEcCC
Q 023273 207 NIEDL-PEKFDVVFDAVGQC---DKALKAVKEGG-RVVSIIGS 244 (284)
Q Consensus 207 ~~~~~-~~~~d~vid~~g~~---~~~~~~l~~~G-~~v~~g~~ 244 (284)
+..+ ...--+++|++|+. ..+.+.+...= ..+.+|..
T Consensus 192 -i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 192 -IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred -hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 2333 24566789999973 34444444432 45555554
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.61 E-value=0.00044 Score=62.14 Aligned_cols=93 Identities=24% Similarity=0.412 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCC-CcccccCCCcccEEEeCC---CC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYT-KENIEDLPEKFDVVFDAV---GQ 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~d~vid~~---g~ 224 (284)
++.+|+|+| +|.+|+.+++.++.+ |++|+++++++++.+.+.. ++........ .+.+.+....+|++|+++ +.
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 345699999 799999999999996 8999999999888877754 4442212211 122333346799999997 32
Q ss_pred ------cHHHHHhhccCCEEEEEcCC
Q 023273 225 ------CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 225 ------~~~~~~~l~~~G~~v~~g~~ 244 (284)
...+++.+++++.++.++..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 26788899999999998643
No 143
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.50 E-value=0.00031 Score=60.35 Aligned_cols=96 Identities=28% Similarity=0.462 Sum_probs=59.8
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccccCCCcccEE
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV 218 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~d~v 218 (284)
++.+++++|++||-+| +| -|..+..+|+.. |++|+.++.+++..+.++ +.|...-+.-...++.+....+|.|
T Consensus 55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~-g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I 131 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAERY-GCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI 131 (273)
T ss_dssp HTTTT--TT-EEEEES--T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHc-CcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence 4678999999999999 45 788888899984 999999999999888775 3442111111112344445689987
Q ss_pred Ee-----CCCC------cHHHHHhhccCCEEEEE
Q 023273 219 FD-----AVGQ------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 219 id-----~~g~------~~~~~~~l~~~G~~v~~ 241 (284)
+. .+|. +..+.+.|+|+|++++-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 64 3442 36788999999999754
No 144
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.47 E-value=0.00048 Score=52.71 Aligned_cols=93 Identities=24% Similarity=0.338 Sum_probs=60.4
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHHHH-HcCCc--EEeeCCCcccccCCCcccEEEeCCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLR-SLGAD--LAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
--.+.+++|+| +|++|.+++..+... |++ ++++.|+.+|.+.+. +++.. .+++.+ ++......+|++|+|++
T Consensus 9 ~l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 9 DLKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQEADIVINATP 84 (135)
T ss_dssp TGTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHTESEEEE-SS
T ss_pred CcCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhhCCeEEEecC
Confidence 34689999999 799999999999886 765 899999988877664 55322 233332 22233467999999987
Q ss_pred Cc-----HHHHHhhcc-CCEEEEEcCC
Q 023273 224 QC-----DKALKAVKE-GGRVVSIIGS 244 (284)
Q Consensus 224 ~~-----~~~~~~l~~-~G~~v~~g~~ 244 (284)
.. ...+....+ -+.++.++.|
T Consensus 85 ~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 85 SGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp TTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CCCcccCHHHHHHHHhhhhceeccccC
Confidence 52 233332222 2577777755
No 145
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.45 E-value=0.00074 Score=61.83 Aligned_cols=89 Identities=25% Similarity=0.279 Sum_probs=70.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--- 224 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--- 224 (284)
.-.|++++|+| .|.+|..+++.++.+ |++|+++++++.+...+...|... . .+.+..+..|+++.++|.
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVETADIFVTATGNKDI 322 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhcCCEEEECCCcccc
Confidence 45799999999 899999999999994 999999988877765555556432 1 123334679999999885
Q ss_pred c-HHHHHhhccCCEEEEEcCC
Q 023273 225 C-DKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 225 ~-~~~~~~l~~~G~~v~~g~~ 244 (284)
. ...+++|++++.++.+|-.
T Consensus 323 I~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 323 ITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCHHHHhccCCCcEEEEcCCC
Confidence 2 5899999999999998765
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.44 E-value=0.00077 Score=65.57 Aligned_cols=109 Identities=25% Similarity=0.294 Sum_probs=67.2
Q ss_pred CceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe
Q 023273 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183 (284)
Q Consensus 104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~ 183 (284)
.++++|..++...++.+ +..+.+++..... ......+|++++|+|++|++|.++++.+... |.+|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEe
Confidence 34556666665555555 4444444431110 0123346899999999999999999998884 89999999
Q ss_pred CChhhHHHHH-HcCC--c-EE--eeCCCc-cccc-------CCCcccEEEeCCC
Q 023273 184 SSTAKLDLLR-SLGA--D-LA--IDYTKE-NIED-------LPEKFDVVFDAVG 223 (284)
Q Consensus 184 ~~~~~~~~~~-~~g~--~-~~--~~~~~~-~~~~-------~~~~~d~vid~~g 223 (284)
+++++.+.+. +++. . .. .|-.+. .... ..+++|++|+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9888766553 3332 1 11 122211 1111 1347999999998
No 147
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.42 E-value=0.00021 Score=67.97 Aligned_cols=76 Identities=26% Similarity=0.463 Sum_probs=57.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC---------------------hhhHHHHHHcCCcEEeeCCC
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS---------------------TAKLDLLRSLGADLAIDYTK 205 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~---------------------~~~~~~~~~~g~~~~~~~~~ 205 (284)
...+|++|+|+| +|+.|++++..++.. |.+|++++.. +++++.++++|.+..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 467899999999 899999999999985 9999998842 34567778889776665432
Q ss_pred -cc--cccCCCcccEEEeCCCC
Q 023273 206 -EN--IEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 206 -~~--~~~~~~~~d~vid~~g~ 224 (284)
.+ ......++|++|+++|+
T Consensus 211 ~~~~~~~~~~~~~D~Vi~AtG~ 232 (564)
T PRK12771 211 GEDITLEQLEGEFDAVFVAIGA 232 (564)
T ss_pred CCcCCHHHHHhhCCEEEEeeCC
Confidence 11 22234579999999985
No 148
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.41 E-value=0.00074 Score=57.32 Aligned_cols=75 Identities=24% Similarity=0.346 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC----C-cEEeeCC--C-cccccC-------
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----A-DLAIDYT--K-ENIEDL------- 211 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~-~~~~~~~--~-~~~~~~------- 211 (284)
...+.+++|+||++++|...+..... .|.+++.+.|+.+|++.+. ++. . .+++..+ + +.....
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 45678999999999999997777776 4999999999999987774 332 1 1233222 1 111111
Q ss_pred CCcccEEEeCCC
Q 023273 212 PEKFDVVFDAVG 223 (284)
Q Consensus 212 ~~~~d~vid~~g 223 (284)
...+|+.++++|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 247999999988
No 149
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.38 E-value=0.0012 Score=48.24 Aligned_cols=90 Identities=31% Similarity=0.406 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC-c--EEeeCCCcccccCCCcccEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA-D--LAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~-~--~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
|+.+||-+|+ +.|..++.+++...+.+++.++.+++..+.+++. +. . .++..+........+.||+|+...
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 6889999983 5588888888843589999999999988888642 21 1 122222211233356799998876
Q ss_pred -C-C-----------cHHHHHhhccCCEEEEE
Q 023273 223 -G-Q-----------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 223 -g-~-----------~~~~~~~l~~~G~~v~~ 241 (284)
. . ++.+.+.|+++|++++-
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 1 25688899999999863
No 150
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.38 E-value=0.0026 Score=55.20 Aligned_cols=92 Identities=17% Similarity=0.109 Sum_probs=61.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccEEEeCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
..++++|+-+| +|. |..++.+++. +..++++++.++...+.+++. +.. .+.....+......+.+|+|+.+.
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999999 666 8888777765 456899999999887777542 211 111111111112245799998765
Q ss_pred C-C-----cHHHHHhhccCCEEEEEc
Q 023273 223 G-Q-----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 223 g-~-----~~~~~~~l~~~G~~v~~g 242 (284)
. . ...+.++|+++|++++.|
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sg 259 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSG 259 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3 2 266789999999998765
No 151
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.37 E-value=0.0019 Score=55.20 Aligned_cols=98 Identities=26% Similarity=0.424 Sum_probs=71.9
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccccCCCcccEEE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF 219 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~d~vi 219 (284)
+..+++||++||-+| .+-|.+++.+|+. .+.+|+.++.|++..+.+++ .|...-+.-...++....+.||-|+
T Consensus 66 ~kl~L~~G~~lLDiG--CGWG~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv 142 (283)
T COG2230 66 EKLGLKPGMTLLDIG--CGWGGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV 142 (283)
T ss_pred HhcCCCCCCEEEEeC--CChhHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence 789999999999999 3568888899998 59999999999998777653 4533222222234455556688775
Q ss_pred e-----CCCC------cHHHHHhhccCCEEEEEcCC
Q 023273 220 D-----AVGQ------CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 220 d-----~~g~------~~~~~~~l~~~G~~v~~g~~ 244 (284)
. .+|. +..+-++|+++|++.+-...
T Consensus 143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 3 4553 37889999999999886443
No 152
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.37 E-value=0.0024 Score=52.22 Aligned_cols=95 Identities=24% Similarity=0.391 Sum_probs=66.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcC-CcE--EeeCCCcc-cccCCCc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLG-ADL--AIDYTKEN-IEDLPEK 214 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g-~~~--~~~~~~~~-~~~~~~~ 214 (284)
...++.++++|+.+| +|. |..++.+++.++ +.+++.++.+++..+.++ .++ .+. ++..+... .......
T Consensus 34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~ 111 (198)
T PRK00377 34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK 111 (198)
T ss_pred HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence 467888999999999 566 888888887642 368999999998887664 345 222 22222211 2223467
Q ss_pred ccEEEeCCCC------cHHHHHhhccCCEEEE
Q 023273 215 FDVVFDAVGQ------CDKALKAVKEGGRVVS 240 (284)
Q Consensus 215 ~d~vid~~g~------~~~~~~~l~~~G~~v~ 240 (284)
+|.||...+. ++.+.++|+++|+++.
T Consensus 112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 9999986542 3677889999999985
No 153
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.35 E-value=0.0026 Score=53.10 Aligned_cols=94 Identities=23% Similarity=0.352 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHc---CCcEEeeCC--C-ccccc-------CCCcc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL---GADLAIDYT--K-ENIED-------LPEKF 215 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~---g~~~~~~~~--~-~~~~~-------~~~~~ 215 (284)
.+++++|+|++|.+|..+++.+... |++|+++++++++...+ ++. +..+.+..+ + +.... .-+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999884 99999999988877655 222 222222211 1 11111 12457
Q ss_pred cEEEeCCCCc--------------------------HHHHHhhccCCEEEEEcCC
Q 023273 216 DVVFDAVGQC--------------------------DKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 216 d~vid~~g~~--------------------------~~~~~~l~~~G~~v~~g~~ 244 (284)
|.++.+.|.. +..+.+++++|+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999887631 2345566778999988754
No 154
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.34 E-value=0.0057 Score=45.40 Aligned_cols=97 Identities=22% Similarity=0.344 Sum_probs=66.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcc-cccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKEN-IEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~-~~~~~~~~d 216 (284)
....+.++++++-+| +|. |..+..+++...+.+++.++.++...+.+++ .+.. .++..+... .....+.+|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 445667788999999 555 8889999887545789999999888777643 3322 222222111 222245799
Q ss_pred EEEeCCC--C----cHHHHHhhccCCEEEEEc
Q 023273 217 VVFDAVG--Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid~~g--~----~~~~~~~l~~~G~~v~~g 242 (284)
+|+...+ . ++.+.+.|+++|++++..
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 9987643 1 378999999999998653
No 155
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.32 E-value=0.0015 Score=56.50 Aligned_cols=91 Identities=18% Similarity=0.346 Sum_probs=68.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---cH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD 226 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---~~ 226 (284)
.|++++|+| .|.+|.+++..++.+ |++|++..+++++.+.+.+.+... +.. .++.+..+++|++++++.. ..
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~-~~~--~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIP-FPL--NKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCee-ecH--HHHHHHhccCCEEEECCChHHhCH
Confidence 578999999 799999999999995 899999999988877776666432 221 1233334689999999864 25
Q ss_pred HHHHhhccCCEEEEEcCCC
Q 023273 227 KALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~~ 245 (284)
..++.++++..++.++...
T Consensus 225 ~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHHhcCCCCeEEEEeCcCC
Confidence 6778888888888776543
No 156
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.30 E-value=0.0009 Score=54.01 Aligned_cols=73 Identities=18% Similarity=0.347 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcc-cc-------cCCCcccEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKEN-IE-------DLPEKFDVV 218 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~-------~~~~~~d~v 218 (284)
.|.+|||+|+++++|++.++-...+ |-+||++.+++++++.++...+ ..+.|-.+.+ .. +.-...+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4789999999999999999988886 9999999999999999986443 2233322211 11 113468889
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
++++|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 98887
No 157
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.30 E-value=0.0017 Score=59.48 Aligned_cols=148 Identities=19% Similarity=0.276 Sum_probs=91.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEE-EecCcc-------ccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccc
Q 023273 63 IPGYDVAGVVEKVGSQVKKFKVGDEVY-GDINEK-------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL 134 (284)
Q Consensus 63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 134 (284)
.-|+|+++-+.+|++++++.-.|+.=+ +.+.+. ...+...++.|++. +++|+.+..+.... ..
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~i~-~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETGIG-AG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcCCC-CC
Confidence 469999999999999988766666522 221110 01111122333332 33444444332222 22
Q ss_pred hHHHHHHHHHhcc----cCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHH-HHHHcCCcEEeeCCCccc
Q 023273 135 ATETAYEGLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKENI 208 (284)
Q Consensus 135 ~~~ta~~al~~~~----~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 208 (284)
+...++.+++.+. ..++++|+|+| +|.+|.+++..++.. |. +++++.++.++.. +++.++.. +++. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence 3344677775332 36789999999 799999999999885 75 7888999888865 55677753 3332 122
Q ss_pred ccCCCcccEEEeCCCC
Q 023273 209 EDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 209 ~~~~~~~d~vid~~g~ 224 (284)
.....++|+||+|+++
T Consensus 237 ~~~l~~aDvVI~aT~s 252 (423)
T PRK00045 237 PEALAEADIVISSTGA 252 (423)
T ss_pred HHHhccCCEEEECCCC
Confidence 2334579999999985
No 158
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.30 E-value=0.0013 Score=54.59 Aligned_cols=73 Identities=27% Similarity=0.489 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC--cE--EeeCCCc-c-------cccCCCccc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA--DL--AIDYTKE-N-------IEDLPEKFD 216 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~--~~--~~~~~~~-~-------~~~~~~~~d 216 (284)
.++.++|+||++++|.++++..... |++++.+.+..++++.+. +++. .. .+|-.+. . .++.-+.+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 4578999999999999999998885 999999999999988775 5662 11 2232221 1 111245799
Q ss_pred EEEeCCC
Q 023273 217 VVFDAVG 223 (284)
Q Consensus 217 ~vid~~g 223 (284)
+.++++|
T Consensus 84 iLvNNAG 90 (246)
T COG4221 84 ILVNNAG 90 (246)
T ss_pred EEEecCC
Confidence 9999998
No 159
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.26 E-value=0.0056 Score=48.88 Aligned_cols=96 Identities=25% Similarity=0.407 Sum_probs=67.2
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEE--eeCCC-cccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLA--IDYTK-ENIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~-~~~~~~~~~~d 216 (284)
....+++|+.++-+|+ ++|..++++++.....++++++++++..+..+ .+|.+.+ +.-+. +.+.+.. .+|
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~d 104 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPD 104 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCC
Confidence 4678899999999995 34556777776544689999999999887664 5775533 32222 2233322 689
Q ss_pred EEEeCCC-C----cHHHHHhhccCCEEEEEc
Q 023273 217 VVFDAVG-Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid~~g-~----~~~~~~~l~~~G~~v~~g 242 (284)
.+|---| + ++.+|+.|+++||+|.-.
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 8876544 3 489999999999998543
No 160
>PRK12742 oxidoreductase; Provisional
Probab=97.22 E-value=0.0042 Score=51.78 Aligned_cols=73 Identities=26% Similarity=0.414 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH-HHcCCcEE-eeCCCc-cccc---CCCcccEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGADLA-IDYTKE-NIED---LPEKFDVVFDAV 222 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~-~~~g~~~~-~~~~~~-~~~~---~~~~~d~vid~~ 222 (284)
.+++++|+|++|++|...++.+... |++++++.+ ++++.+.+ .+.+...+ .|..+. .+.+ ..+.+|++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 5789999999999999999888874 888887765 44444443 34443322 222111 1111 124689999998
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
|
T Consensus 84 g 84 (237)
T PRK12742 84 G 84 (237)
T ss_pred C
Confidence 7
No 161
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.18 E-value=0.0092 Score=49.32 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=66.3
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE--EeeCCCcccccCCCc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEK 214 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~ 214 (284)
.++...++++++||-+| ++.|..++.+++..+ +.+++.++.+++-.+.+++ .+..+ ++..+..........
T Consensus 68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~ 145 (212)
T PRK13942 68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAP 145 (212)
T ss_pred HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCC
Confidence 34566789999999998 356777777777641 2689999999888776653 34322 222221111111357
Q ss_pred ccEEEeCCC--C-cHHHHHhhccCCEEEEEcC
Q 023273 215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~g~ 243 (284)
||+|+-... . +...++.|+++|+++..-+
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~~ 177 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPVG 177 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEEc
Confidence 999876543 2 4788999999999987643
No 162
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.14 E-value=0.0057 Score=53.77 Aligned_cols=97 Identities=25% Similarity=0.342 Sum_probs=66.8
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHH----HcCCcEEeeCCCcc--cccCCC
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLR----SLGADLAIDYTKEN--IEDLPE 213 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~--~~~~~~ 213 (284)
.++...++++++||.+| +| .|..++.+++.. + ..|+.++.+++..+.++ ..+.+.+.....+. ......
T Consensus 72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~ 148 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFA 148 (322)
T ss_pred HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccC
Confidence 33556788999999999 55 699999999874 4 36899999988776654 35544322111111 111124
Q ss_pred cccEEEeCCCC---cHHHHHhhccCCEEEEE
Q 023273 214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 214 ~~d~vid~~g~---~~~~~~~l~~~G~~v~~ 241 (284)
.+|+|+.+.+. +...++.|+++|+++..
T Consensus 149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 69999998773 46788999999998874
No 163
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.14 E-value=0.0033 Score=56.73 Aligned_cols=101 Identities=23% Similarity=0.373 Sum_probs=69.8
Q ss_pred HHHHH-HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccE
Q 023273 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 139 a~~al-~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~ 217 (284)
.+..+ +..+++++++||.+| + +.|..+..+++. .+++|+.++.+++..+.+++......++....++....+.+|.
T Consensus 155 k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~-~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD~ 231 (383)
T PRK11705 155 KLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEH-YGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFDR 231 (383)
T ss_pred HHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCCE
Confidence 33333 567889999999999 4 577788888887 4899999999999999887643221121111122233457998
Q ss_pred EEeC-----CCC------cHHHHHhhccCCEEEEEc
Q 023273 218 VFDA-----VGQ------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 218 vid~-----~g~------~~~~~~~l~~~G~~v~~g 242 (284)
|+.. +|. ++.+.+.|+++|++++..
T Consensus 232 Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 232 IVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 8753 332 267888999999998753
No 164
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.08 E-value=0.0024 Score=52.57 Aligned_cols=98 Identities=27% Similarity=0.364 Sum_probs=64.6
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC--eEEEEeCChhhHHHHH----HcCCcEE--eeCCCc-ccccCC
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADLA--IDYTKE-NIEDLP 212 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~-~~~~~~ 212 (284)
+++...+++|++||.+| ++.|+.++.+++.. +. +|+.++..++-.+.++ .++...+ +..+.. .++. .
T Consensus 64 ~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~-~ 139 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPE-E 139 (209)
T ss_dssp HHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGG-G
T ss_pred HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcccc-C
Confidence 45667799999999998 46788888888875 43 5888888877665553 3454322 221111 1212 3
Q ss_pred CcccEEEeCCCC---cHHHHHhhccCCEEEEEcC
Q 023273 213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 213 ~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~ 243 (284)
..||.|+-+.+. +...++.|+++|++|..-.
T Consensus 140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 479999988763 6889999999999998543
No 165
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.03 E-value=0.0047 Score=49.58 Aligned_cols=108 Identities=21% Similarity=0.258 Sum_probs=74.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC---
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--- 224 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~--- 224 (284)
.-.|.+|.|+| .|.+|...++.++. +|++|++.+++.+........+.. . .++.+.....|+|+.+...
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~~~~~~~~~~~~-~-----~~l~ell~~aDiv~~~~plt~~ 104 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKA-FGMRVIGYDRSPKPEEGADEFGVE-Y-----VSLDELLAQADIVSLHLPLTPE 104 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHH-TT-EEEEEESSCHHHHHHHHTTEE-E-----SSHHHHHHH-SEEEE-SSSSTT
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeec-CCceeEEecccCChhhhcccccce-e-----eehhhhcchhhhhhhhhccccc
Confidence 34689999999 99999999999999 599999999987766644454431 1 1233444578999887651
Q ss_pred -----cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273 225 -----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA 275 (284)
Q Consensus 225 -----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 275 (284)
-...+..|+++..+|-++-.. -=+-+.+++.+++|++.-
T Consensus 105 T~~li~~~~l~~mk~ga~lvN~aRG~------------~vde~aL~~aL~~g~i~g 148 (178)
T PF02826_consen 105 TRGLINAEFLAKMKPGAVLVNVARGE------------LVDEDALLDALESGKIAG 148 (178)
T ss_dssp TTTSBSHHHHHTSTTTEEEEESSSGG------------GB-HHHHHHHHHTTSEEE
T ss_pred cceeeeeeeeeccccceEEEeccchh------------hhhhhHHHHHHhhccCce
Confidence 178899999999888765211 112346677778888763
No 166
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.02 E-value=0.005 Score=49.24 Aligned_cols=88 Identities=26% Similarity=0.278 Sum_probs=61.9
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc---ccccCCCcccEEEeCCCC------
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVGQ------ 224 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~d~vid~~g~------ 224 (284)
|+|+||+|.+|...++.+... +.+|+++.+++++... ..+. +++.-+-. .+.+...++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~ 76 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGV-EIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD 76 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTE-EEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--cccc-ccceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence 789999999999999999985 8999999999998876 3332 23332222 233334689999999983
Q ss_pred -cHHHHHhhccC--CEEEEEcCCC
Q 023273 225 -CDKALKAVKEG--GRVVSIIGSV 245 (284)
Q Consensus 225 -~~~~~~~l~~~--G~~v~~g~~~ 245 (284)
....++.++.. .+++.++...
T Consensus 77 ~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 77 AAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccceeeeccc
Confidence 24455555444 4788776544
No 167
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.93 E-value=0.018 Score=47.37 Aligned_cols=98 Identities=16% Similarity=0.111 Sum_probs=65.2
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCc
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEK 214 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~ 214 (284)
++...++++++||-+|+ +.|..++.+++... +.+++.++.+++-.+.+++ .+.. .++..+..........
T Consensus 65 ~~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~ 142 (205)
T PRK13944 65 CELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP 142 (205)
T ss_pred HHhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence 45567889999999983 55777777777642 3689999999887666643 3421 2233222111112357
Q ss_pred ccEEEeCCC--C-cHHHHHhhccCCEEEEEc
Q 023273 215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 215 ~d~vid~~g--~-~~~~~~~l~~~G~~v~~g 242 (284)
||+|+-+.. . ++.+++.|+++|+++..-
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 999887654 2 478889999999998753
No 168
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.91 E-value=0.01 Score=49.70 Aligned_cols=99 Identities=24% Similarity=0.263 Sum_probs=73.1
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----Cc--EEeeCCCcccccCCCcccEE
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----AD--LAIDYTKENIEDLPEKFDVV 218 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~~~~~d~v 218 (284)
..+..+|++||-++ +++|-.+..+++..+..+|++++.+++-++.+++-- .. ..+..+.+.++=....||++
T Consensus 46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~v 123 (238)
T COG2226 46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAV 123 (238)
T ss_pred hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEE
Confidence 45666999999986 678999999999865579999999999888886422 11 12333333444335679999
Q ss_pred EeCCC-----C----cHHHHHhhccCCEEEEEcCCC
Q 023273 219 FDAVG-----Q----CDKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 219 id~~g-----~----~~~~~~~l~~~G~~v~~g~~~ 245 (284)
..+.| + +..+.|.|+|+|+++.+....
T Consensus 124 t~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 124 TISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred EeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 88777 2 378999999999999886543
No 169
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.83 E-value=0.015 Score=46.99 Aligned_cols=94 Identities=29% Similarity=0.397 Sum_probs=62.4
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCcccEEEeC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d~vid~ 221 (284)
++++.+||-+|+ +.|..++.+++...+.+++.++.+++..+.++ +.+.+. ++..+...+.. .+.+|+|+..
T Consensus 43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence 445899999984 44566666666435789999999988776664 344322 22222222222 4579999875
Q ss_pred C-CC----cHHHHHhhccCCEEEEEcCC
Q 023273 222 V-GQ----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 222 ~-g~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
. +. ++.+.+.|+++|+++.+-+.
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 147 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALKGR 147 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 3 33 36788999999999988544
No 170
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.80 E-value=0.016 Score=45.38 Aligned_cols=91 Identities=19% Similarity=0.266 Sum_probs=63.6
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC- 225 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~- 225 (284)
..-.|++++|.| -|.+|...++.++.+ |++|++++.++-+.-++..-|.... .+.+..+..|+++.++|..
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v~------~~~~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEVM------TLEEALRDADIFVTATGNKD 90 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EEE-------HHHHTTT-SEEEE-SSSSS
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEec------CHHHHHhhCCEEEECCCCcc
Confidence 346899999999 999999999999996 9999999999988887777675422 1233356789999999952
Q ss_pred ---HHHHHhhccCCEEEEEcCCC
Q 023273 226 ---DKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 226 ---~~~~~~l~~~G~~v~~g~~~ 245 (284)
..-++.|+++.-+..+|...
T Consensus 91 vi~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 91 VITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp SB-HHHHHHS-TTEEEEESSSST
T ss_pred ccCHHHHHHhcCCeEEeccCcCc
Confidence 57788888887777666554
No 171
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0069 Score=50.71 Aligned_cols=74 Identities=31% Similarity=0.460 Sum_probs=51.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEE-eeCCCc-cccc---CCCcccEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLA-IDYTKE-NIED---LPEKFDVVFDAV 222 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~-~~~~~~-~~~~---~~~~~d~vid~~ 222 (284)
..+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+.+ .+...+ .|..+. .... ..+++|++|++.
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 35689999999999999999998884 8999999998877765543 333221 222221 1111 134689999988
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
|
T Consensus 86 g 86 (245)
T PRK07060 86 G 86 (245)
T ss_pred C
Confidence 7
No 172
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.78 E-value=0.034 Score=46.01 Aligned_cols=100 Identities=21% Similarity=0.207 Sum_probs=64.9
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE--EeeCCCcccccCCCc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEK 214 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~ 214 (284)
.++...++++++||-+| ++.|..++.+++... ..+|+.++.+++..+.+++ .+.+. ++..+..........
T Consensus 69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 146 (215)
T TIGR00080 69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAP 146 (215)
T ss_pred HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCC
Confidence 34556789999999998 356777777887631 2359999999887776643 44322 222221111112357
Q ss_pred ccEEEeCCC---CcHHHHHhhccCCEEEEEcC
Q 023273 215 FDVVFDAVG---QCDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 215 ~d~vid~~g---~~~~~~~~l~~~G~~v~~g~ 243 (284)
||+|+-... -++.+.+.|+++|+++..-+
T Consensus 147 fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~~ 178 (215)
T TIGR00080 147 YDRIYVTAAGPKIPEALIDQLKEGGILVMPVG 178 (215)
T ss_pred CCEEEEcCCcccccHHHHHhcCcCcEEEEEEc
Confidence 998875433 25788899999999987643
No 173
>PRK08317 hypothetical protein; Provisional
Probab=96.78 E-value=0.019 Score=47.83 Aligned_cols=97 Identities=25% Similarity=0.295 Sum_probs=66.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHc----CCc-EEeeCCCcccccCCCcccE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d~ 217 (284)
+...+.++++||.+| +|. |..+..++... ...+++.++.+++..+.+++. +.. .+...+....+...+.+|+
T Consensus 13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 90 (241)
T PRK08317 13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDA 90 (241)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceE
Confidence 567788999999999 554 88888888874 246899999999988877654 111 1222221112222457998
Q ss_pred EEeCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273 218 VFDAVG-----Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 218 vid~~g-----~----~~~~~~~l~~~G~~v~~g 242 (284)
|+.... + +..+.++|+++|++++..
T Consensus 91 v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 91 VRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 876422 2 378889999999998765
No 174
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.77 E-value=0.015 Score=53.16 Aligned_cols=148 Identities=20% Similarity=0.291 Sum_probs=93.1
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEE-EecC-------ccccCCCCCCCceeeEEeeecCceee---C-CCCCCHHhhh
Q 023273 63 IPGYDVAGVVEKVGSQVKKFKVGDEVY-GDIN-------EKALDHPKRNGSLAEYTAVEENLLAL---K-PKNLSFVEAA 130 (284)
Q Consensus 63 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~aa 130 (284)
.-|.|+++.+.+|++++++.-.|+.-+ +.+. .....+...++.|++++.++. .+.. | +..++...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 468889999999999988766666532 1111 112233445678888887765 2222 3 2223321111
Q ss_pred cccchHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHH-HHHHcCCcEEeeCCCccc
Q 023273 131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSLGADLAIDYTKENI 208 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 208 (284)
.-.+.+..+..++++|+|+| +|.+|..+++.++.. | .+++++.++.++.. .+++++.. .++.+ +.
T Consensus 168 --------v~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~--~l 234 (417)
T TIGR01035 168 --------VELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGE-AVKFE--DL 234 (417)
T ss_pred --------HHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH--HH
Confidence 11122334456789999999 799999999999885 7 68889999888755 55667653 23221 22
Q ss_pred ccCCCcccEEEeCCCC
Q 023273 209 EDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 209 ~~~~~~~d~vid~~g~ 224 (284)
.+...++|+||+|+++
T Consensus 235 ~~~l~~aDvVi~aT~s 250 (417)
T TIGR01035 235 EEYLAEADIVISSTGA 250 (417)
T ss_pred HHHHhhCCEEEECCCC
Confidence 3334589999999985
No 175
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.76 E-value=0.0097 Score=52.28 Aligned_cols=90 Identities=22% Similarity=0.303 Sum_probs=60.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe-eCC-CcccccCCCcccEEEeCCCCc-----
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYT-KENIEDLPEKFDVVFDAVGQC----- 225 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~~~~d~vid~~g~~----- 225 (284)
+|+|+||+|-+|...+..+... |.+|++++++.++.......+.+.+. |.. .+.+...-+++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 7999999999999999888874 89999999987766555544543221 221 122333356899999986521
Q ss_pred ----------HHHHHhhccCC--EEEEEcC
Q 023273 226 ----------DKALKAVKEGG--RVVSIIG 243 (284)
Q Consensus 226 ----------~~~~~~l~~~G--~~v~~g~ 243 (284)
..+++.++..| +++.++.
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 13445444444 8888765
No 176
>PRK06182 short chain dehydrogenase; Validated
Probab=96.75 E-value=0.0084 Score=51.31 Aligned_cols=73 Identities=26% Similarity=0.384 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccC-------CCcccEEEe
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDL-------PEKFDVVFD 220 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~-------~~~~d~vid 220 (284)
.+++++|+|++|++|...++.+... |.+|+++++++++.+.+...+...+ .|-.+ +.+... .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999999999999999988874 9999999998888766655443221 23221 111111 347999999
Q ss_pred CCC
Q 023273 221 AVG 223 (284)
Q Consensus 221 ~~g 223 (284)
++|
T Consensus 81 ~ag 83 (273)
T PRK06182 81 NAG 83 (273)
T ss_pred CCC
Confidence 987
No 177
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.0089 Score=50.57 Aligned_cols=74 Identities=23% Similarity=0.372 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE-eeCCCc-ccccC-------CCcccEE
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTKE-NIEDL-------PEKFDVV 218 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~~-~~~~~-------~~~~d~v 218 (284)
-.+++++|+|++|++|...++..... |++++++++++++.+... +++...+ .|..+. ..... .+.+|++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35789999999999999999988884 999999999877665443 3433211 222221 11111 2468999
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
+.++|
T Consensus 84 i~~ag 88 (255)
T PRK06057 84 FNNAG 88 (255)
T ss_pred EECCC
Confidence 99876
No 178
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.011 Score=50.71 Aligned_cols=73 Identities=21% Similarity=0.363 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-ccc----c----CCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIE----D----LPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~----~----~~~~~d~vi 219 (284)
.+++++|+|++|++|.+.++.+... |.+|+++++++++.+.+.+.+...+ .|..+. ... . ..+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999998888774 9999999999888877766553322 232221 111 1 124689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 179
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0092 Score=51.88 Aligned_cols=73 Identities=30% Similarity=0.376 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCC-cEE----eeCCCc-cccc-------CCCcc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA-DLA----IDYTKE-NIED-------LPEKF 215 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~-~~~----~~~~~~-~~~~-------~~~~~ 215 (284)
.+++++|+|++|++|..+++.... .|++|+++.+++++.+.+ ++++. ..+ .|-.+. .... ..+.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHA-RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999998887 499999999988877655 34442 111 222211 1111 12579
Q ss_pred cEEEeCCC
Q 023273 216 DVVFDAVG 223 (284)
Q Consensus 216 d~vid~~g 223 (284)
|++|+++|
T Consensus 87 d~vI~nAG 94 (296)
T PRK05872 87 DVVVANAG 94 (296)
T ss_pred CEEEECCC
Confidence 99999987
No 180
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0095 Score=51.00 Aligned_cols=71 Identities=18% Similarity=0.329 Sum_probs=50.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-ccccc-------CCCcccEEEeCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIED-------LPEKFDVVFDAV 222 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~-------~~~~~d~vid~~ 222 (284)
++++|+|++|++|...++.+... |++|+++++++++.+.+.+.+...+ .|..+ +.+.+ ..+++|++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999888874 9999999998887776665553322 23222 11111 125799999998
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 7
No 181
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.61 E-value=0.0053 Score=57.74 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=55.0
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-c--------CC-----cEEe--eCCC-cc
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L--------GA-----DLAI--DYTK-EN 207 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~--------g~-----~~~~--~~~~-~~ 207 (284)
..+.+.|++++|+||+|.+|..+++.+... |.+|++++++.++...+.+ + |. ..++ |-.+ +.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 466778999999999999999999888874 9999999998887654421 1 11 1122 2211 22
Q ss_pred cccCCCcccEEEeCCCC
Q 023273 208 IEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 208 ~~~~~~~~d~vid~~g~ 224 (284)
+...-+++|+||+++|.
T Consensus 153 I~~aLggiDiVVn~AG~ 169 (576)
T PLN03209 153 IGPALGNASVVICCIGA 169 (576)
T ss_pred HHHHhcCCCEEEEcccc
Confidence 22334689999999873
No 182
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.61 E-value=0.01 Score=48.22 Aligned_cols=75 Identities=28% Similarity=0.352 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-c----CCcE-EeeCC-CcccccCCCcccEEEeC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L----GADL-AIDYT-KENIEDLPEKFDVVFDA 221 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~----g~~~-~~~~~-~~~~~~~~~~~d~vid~ 221 (284)
..+.+++|+|++|.+|..++..+... +.+++++.++.++.+.+.+ + +... ..+.. .++....-.++|+||.+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 35789999998999999888887774 8899999998887665532 2 2211 11111 11222334679999998
Q ss_pred CCC
Q 023273 222 VGQ 224 (284)
Q Consensus 222 ~g~ 224 (284)
+..
T Consensus 105 t~~ 107 (194)
T cd01078 105 GAA 107 (194)
T ss_pred CCC
Confidence 764
No 183
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.011 Score=52.42 Aligned_cols=74 Identities=26% Similarity=0.484 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCC-ccccc-------CCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTK-ENIED-------LPE 213 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~-------~~~ 213 (284)
..+++++|+|++|++|.+.++.+... |++|+++.+++++++.+ ++.+.+. ++ |-.+ +...+ ..+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 35789999999999999999988884 99999999988877544 3345332 22 2221 11111 135
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
++|++|+++|
T Consensus 84 ~iD~lVnnAG 93 (330)
T PRK06139 84 RIDVWVNNVG 93 (330)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 184
>PRK14967 putative methyltransferase; Provisional
Probab=96.60 E-value=0.049 Score=45.33 Aligned_cols=95 Identities=22% Similarity=0.246 Sum_probs=62.0
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVV 218 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~v 218 (284)
....++++++||-.| +|. |..++.+++. +..+++.++.+++..+.+++ .+.. .+++.+.... ...+.+|+|
T Consensus 30 ~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~V 105 (223)
T PRK14967 30 AAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVV 105 (223)
T ss_pred HhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEE
Confidence 445678899999999 565 8888888875 34489999999987776543 3322 2232221111 113579999
Q ss_pred EeCCC---C---------------------------cHHHHHhhccCCEEEEEc
Q 023273 219 FDAVG---Q---------------------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 219 id~~g---~---------------------------~~~~~~~l~~~G~~v~~g 242 (284)
+.+.. . +..+.+.|+++|+++++.
T Consensus 106 i~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 106 VSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred EECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 87521 0 134678999999998753
No 185
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.011 Score=48.98 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=48.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCC-ccccc----C-CCcccEEEeCCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK-ENIED----L-PEKFDVVFDAVG 223 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~----~-~~~~d~vid~~g 223 (284)
++++|+|++|++|...++..... |++|+++++++++.+.+++.+....+ |-.+ +...+ . .+++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999988887774 99999999988777666554422222 2111 11111 1 246999998875
No 186
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.013 Score=49.57 Aligned_cols=43 Identities=33% Similarity=0.462 Sum_probs=37.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
..+++++|+|++|.+|..++..+... |++|+++.+++++.+.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 49 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL 49 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 46789999999999999999988884 99999999988876555
No 187
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.014 Score=49.91 Aligned_cols=73 Identities=23% Similarity=0.296 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEe--eCCC-cccc-------cCCCcccEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTK-ENIE-------DLPEKFDVV 218 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~-~~~~-------~~~~~~d~v 218 (284)
.+.+++|+||+|++|...++.+... |++++++++++++.+.+ ++++...++ |-.+ +.+. +..+++|++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3679999999999999988887774 99999999988877654 334312222 2221 1111 113578999
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
|+++|
T Consensus 83 i~~ag 87 (273)
T PRK07825 83 VNNAG 87 (273)
T ss_pred EECCC
Confidence 99987
No 188
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.54 E-value=0.011 Score=50.26 Aligned_cols=73 Identities=27% Similarity=0.431 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEe--eCCC-ccccc-------CCCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTK-ENIED-------LPEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~--~~~~-~~~~~-------~~~~~d~ 217 (284)
.+++++|+|+++++|...++.+... |++|+++++++++.+.+.+ ++.. ..+ |-.+ +.... ..+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5789999999999999999888884 9999999998887766643 3321 122 2111 11111 1246899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|+++|
T Consensus 84 li~~ag 89 (263)
T PRK06200 84 FVGNAG 89 (263)
T ss_pred EEECCC
Confidence 998876
No 189
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.53 E-value=0.011 Score=51.26 Aligned_cols=91 Identities=24% Similarity=0.269 Sum_probs=59.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCC-cEEeeCCCcccccCCCcccEEEeCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
..+|++||=+| .++|.+++..++. +..+|++++.++.-.+.+++ .+. ..+.-....+. ..+.||+|+-+.
T Consensus 159 ~~~g~~vLDvG--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~--~~~~~dlvvANI 233 (295)
T PF06325_consen 159 VKPGKRVLDVG--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDL--VEGKFDLVVANI 233 (295)
T ss_dssp SSTTSEEEEES---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCT--CCS-EEEEEEES
T ss_pred ccCCCEEEEeC--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEeccc--ccccCCEEEECC
Confidence 67889999998 3567788888886 56689999998887666543 221 22211111111 137899999876
Q ss_pred CC------cHHHHHhhccCCEEEEEcC
Q 023273 223 GQ------CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 223 g~------~~~~~~~l~~~G~~v~~g~ 243 (284)
-. .....++|+++|.+++.|.
T Consensus 234 ~~~vL~~l~~~~~~~l~~~G~lIlSGI 260 (295)
T PF06325_consen 234 LADVLLELAPDIASLLKPGGYLILSGI 260 (295)
T ss_dssp -HHHHHHHHHHCHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhhCCCCEEEEccc
Confidence 52 2667889999999997773
No 190
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=96.51 E-value=0.072 Score=41.39 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=66.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC--ChhhHHHHHH----cCC---cE-------EeeC---------CCcc
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRS----LGA---DL-------AIDY---------TKEN 207 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~--~~~~~~~~~~----~g~---~~-------~~~~---------~~~~ 207 (284)
+|.|+| .|.+|...++.+.......++++.. +++-...+-+ .|. +. +++- +...
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 578999 6999999888877544566665443 4444444422 221 10 0110 0011
Q ss_pred cccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHH
Q 023273 208 IEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSIL 261 (284)
Q Consensus 208 ~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 261 (284)
++....++|+|+||+|.+ +.+...+..+.+-|+++.|......+|+++.+.+.+
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~~~~t~V~GvN~~~~ 137 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKDADKTFVYGVNHDEY 137 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCCCCceEEEeechHHc
Confidence 111234799999999963 556678888888888988876544467777666544
No 191
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.50 E-value=0.012 Score=49.91 Aligned_cols=44 Identities=32% Similarity=0.469 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~ 194 (284)
.+++++|+|++|++|...++.+... |++|+++.++.++.+.+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEA 47 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh
Confidence 5789999999999999999888774 9999999998877766654
No 192
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.49 E-value=0.034 Score=47.07 Aligned_cols=93 Identities=20% Similarity=0.205 Sum_probs=62.6
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeCCC-
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG- 223 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~~g- 223 (284)
....++++||-+| +|. |..+..+++. +.+++.++.+++.++.+++... ...+..+...++-..+.+|+|+....
T Consensus 38 l~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~l 113 (251)
T PRK10258 38 LPQRKFTHVLDAG-CGP-GWMSRYWRER--GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLAV 113 (251)
T ss_pred cCccCCCeEEEee-CCC-CHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECchh
Confidence 3445678999999 554 6666666653 7899999999999888876542 22232222222222356999987643
Q ss_pred ----C----cHHHHHhhccCCEEEEEc
Q 023273 224 ----Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 224 ----~----~~~~~~~l~~~G~~v~~g 242 (284)
+ +..+.+.|+++|.+++..
T Consensus 114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 114 QWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 2 367888999999998764
No 193
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.018 Score=50.07 Aligned_cols=73 Identities=25% Similarity=0.450 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCC--C-ccccc-------CCCc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYT--K-ENIED-------LPEK 214 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~--~-~~~~~-------~~~~ 214 (284)
.+.+++|+|++|++|.+.++.+... |++|++++++.++.+.+.+ .+.. ..+..+ + +...+ ..+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999888774 9999999998877655432 2321 122211 1 11111 1247
Q ss_pred ccEEEeCCC
Q 023273 215 FDVVFDAVG 223 (284)
Q Consensus 215 ~d~vid~~g 223 (284)
+|++++++|
T Consensus 118 id~li~~AG 126 (293)
T PRK05866 118 VDILINNAG 126 (293)
T ss_pred CCEEEECCC
Confidence 999999987
No 194
>PRK06196 oxidoreductase; Provisional
Probab=96.43 E-value=0.016 Score=50.81 Aligned_cols=73 Identities=18% Similarity=0.342 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEEe--eCCC-ccccc-------CCCcccEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTK-ENIED-------LPEKFDVV 218 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~-~~~~~-------~~~~~d~v 218 (284)
.+.+++|+|++|++|.+++...... |.+|+++.+++++.+.+. ++.....+ |-.+ +.... ..+++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4689999999999999988887774 999999999887765442 22211222 2211 11111 12579999
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
|+++|
T Consensus 104 i~nAg 108 (315)
T PRK06196 104 INNAG 108 (315)
T ss_pred EECCC
Confidence 99887
No 195
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.42 E-value=0.041 Score=46.73 Aligned_cols=95 Identities=22% Similarity=0.224 Sum_probs=66.1
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
+......++++||-+|+ | .|..+..+++...+.+++.++.+++-.+.+++.+.+ ++..+...+. ..+.+|+|+...
T Consensus 22 l~~l~~~~~~~vLDlGc-G-~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~-~~~~d~~~~~-~~~~fD~v~~~~ 97 (255)
T PRK14103 22 LARVGAERARRVVDLGC-G-PGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVD-ARTGDVRDWK-PKPDTDVVVSNA 97 (255)
T ss_pred HHhCCCCCCCEEEEEcC-C-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCc-EEEcChhhCC-CCCCceEEEEeh
Confidence 34566788899999993 3 367777787764367999999999988888776543 2222222222 235799998764
Q ss_pred C-----C----cHHHHHhhccCCEEEEE
Q 023273 223 G-----Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 223 g-----~----~~~~~~~l~~~G~~v~~ 241 (284)
. + ...+.+.|+++|++++.
T Consensus 98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 98 ALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 3 2 25788889999999875
No 196
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.016 Score=49.01 Aligned_cols=72 Identities=22% Similarity=0.318 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~d~vid~~g 223 (284)
.+++++|+|++|++|.+.++..... |++|+++++++ ++.+.... +....+ |-.+ +...+.-+.+|++|+++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG 88 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHG 88 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence 3679999999999999988887774 99999998865 22222111 111222 2211 112223457999999987
No 197
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.39 E-value=0.029 Score=48.45 Aligned_cols=142 Identities=21% Similarity=0.248 Sum_probs=84.6
Q ss_pred CCCCCEEEEecCccccCCCCCCCceeeEEeeecCceeeCCCCCCHHhhhcccchHHHHHHHHH--hcccCCCCEEEEEcC
Q 023273 82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGG 159 (284)
Q Consensus 82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~~g~~vlI~ga 159 (284)
.+.|+|.+..+ +|.++..-....++++.+++-+ .......|++ +++ ....++|++|+=+|
T Consensus 109 ~rig~~f~I~P------------sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~~~g~~vlDvG- 170 (300)
T COG2264 109 VRIGERFVIVP------------SWREYPEPSDELNIELDPGLAF----GTGTHPTTSL-CLEALEKLLKKGKTVLDVG- 170 (300)
T ss_pred EEeeeeEEECC------------CCccCCCCCCceEEEEcccccc----CCCCChhHHH-HHHHHHHhhcCCCEEEEec-
Confidence 55677665543 3444332223455677666633 1223332322 332 23456999999999
Q ss_pred CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcccc--cCCCcccEEEeCCC-C-----cHH
Q 023273 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIE--DLPEKFDVVFDAVG-Q-----CDK 227 (284)
Q Consensus 160 ~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~--~~~~~~d~vid~~g-~-----~~~ 227 (284)
.+.|.+++..++. +..+++.++.++--.+.+++ .+............. ...+.+|+|+-+.= . .++
T Consensus 171 -cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~ 248 (300)
T COG2264 171 -CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPD 248 (300)
T ss_pred -CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHH
Confidence 4568899988887 56679999998776665543 222210101111111 11358999998753 2 278
Q ss_pred HHHhhccCCEEEEEcC
Q 023273 228 ALKAVKEGGRVVSIIG 243 (284)
Q Consensus 228 ~~~~l~~~G~~v~~g~ 243 (284)
..++++++|++++.|.
T Consensus 249 ~~~~lkpgg~lIlSGI 264 (300)
T COG2264 249 IKRLLKPGGRLILSGI 264 (300)
T ss_pred HHHHcCCCceEEEEee
Confidence 8999999999998774
No 198
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.38 E-value=0.014 Score=50.10 Aligned_cols=96 Identities=26% Similarity=0.413 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee----eCCC-cccc-------cC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI----DYTK-ENIE-------DL 211 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~----~~~~-~~~~-------~~ 211 (284)
-.++.|+|+||++++|.+++.-.... |++.+.+.+..++++.+ ++.++.. ++ |-.+ ++.+ ..
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~-G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKR-GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhC-CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 36889999999999998866555553 99999999887777666 3444322 21 1111 1111 12
Q ss_pred CCcccEEEeCCCC----c------------------------HHHHHhhccC--CEEEEEcCCC
Q 023273 212 PEKFDVVFDAVGQ----C------------------------DKALKAVKEG--GRVVSIIGSV 245 (284)
Q Consensus 212 ~~~~d~vid~~g~----~------------------------~~~~~~l~~~--G~~v~~g~~~ 245 (284)
-+++|+.++++|- + +.++..|++. |+||.++...
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 4689999999881 0 2466666654 9999986543
No 199
>PRK04148 hypothetical protein; Provisional
Probab=96.38 E-value=0.026 Score=42.86 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=52.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~ 224 (284)
...+.+++++| +| .|...+..+..+ |.+|++++.+++..+.+++.+...+.+.-...-.+..+++|+++..-..
T Consensus 14 ~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp 87 (134)
T PRK04148 14 KGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPP 87 (134)
T ss_pred cccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence 34568899999 77 887555555564 9999999999999999988876544432222223335688888887654
No 200
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.38 E-value=0.023 Score=44.13 Aligned_cols=100 Identities=24% Similarity=0.305 Sum_probs=60.9
Q ss_pred HHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcEEeeCCCcccccCCCcccEEE
Q 023273 142 GLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVF 219 (284)
Q Consensus 142 al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d~vi 219 (284)
+++..+. ..+.+++|+| +|.+|...++.....++.+++++++++++.+.+ ++++... +.....+..+..+++|+++
T Consensus 9 a~~~~~~~~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dvvi 86 (155)
T cd01065 9 ALEEAGIELKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAEADLII 86 (155)
T ss_pred HHHhhCCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhccccCCEEE
Confidence 4443333 5578999999 699999988888774236788889888776654 4444321 0011112223347899999
Q ss_pred eCCCCcH-------HHHHhhccCCEEEEEcC
Q 023273 220 DAVGQCD-------KALKAVKEGGRVVSIIG 243 (284)
Q Consensus 220 d~~g~~~-------~~~~~l~~~G~~v~~g~ 243 (284)
.|+.... .....++++..++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9987421 12244566666665543
No 201
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.025 Score=48.07 Aligned_cols=76 Identities=29% Similarity=0.441 Sum_probs=50.5
Q ss_pred ccCCCCEEEEEcCCc-hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-----cCCcEE--e--eCCCc-cccc-----
Q 023273 147 AFSAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-----LGADLA--I--DYTKE-NIED----- 210 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g-~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~-~~~~----- 210 (284)
.+..+++++|+|++| ++|.+.++.+... |++|+++++++++.+...+ ++...+ + |..+. ....
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 345678999999886 8999999998884 9999999888776654422 342222 2 22111 1111
Q ss_pred --CCCcccEEEeCCC
Q 023273 211 --LPEKFDVVFDAVG 223 (284)
Q Consensus 211 --~~~~~d~vid~~g 223 (284)
..+.+|++|+++|
T Consensus 92 ~~~~g~id~li~~ag 106 (262)
T PRK07831 92 VERLGRLDVLVNNAG 106 (262)
T ss_pred HHHcCCCCEEEECCC
Confidence 1247899999987
No 202
>PLN02244 tocopherol O-methyltransferase
Probab=96.30 E-value=0.057 Score=48.01 Aligned_cols=92 Identities=21% Similarity=0.221 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc---EEeeCCCcccccCCCcccEEEeC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d~vid~ 221 (284)
+++++||-+|+ +.|..+..+++.. +++++.++.+++..+.+++ .+.. .++..+....+-..+.||+|+..
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~ 193 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM 193 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence 78899999983 5567778888874 8999999999887766654 2321 12222211222224579999865
Q ss_pred CC-----C----cHHHHHhhccCCEEEEEcC
Q 023273 222 VG-----Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 222 ~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (284)
.. + +..+.+.|+++|++++...
T Consensus 194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 194 ESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred CchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 32 1 2678899999999998753
No 203
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.023 Score=49.81 Aligned_cols=42 Identities=24% Similarity=0.335 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|.++++.+... |++|+++.+++++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~ 54 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAA 54 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 89999999987765544
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.061 Score=45.11 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
.+++++|+|++|++|...+..+... |.+|+++.++.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~ 40 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK 40 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 4689999999999999999888774 89999888764
No 205
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=96.28 E-value=0.013 Score=40.91 Aligned_cols=78 Identities=28% Similarity=0.304 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE---EeeCCCcccccCCCcccEEEeCCC-----C----cHHHH
Q 023273 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AIDYTKENIEDLPEKFDVVFDAVG-----Q----CDKAL 229 (284)
Q Consensus 162 ~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~d~vid~~g-----~----~~~~~ 229 (284)
+.|..+..+++. .+.++++++.+++..+.+++..... +...+...++-..+.+|+|+.... . .+.+.
T Consensus 6 G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~e~~ 84 (95)
T PF08241_consen 6 GTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALREIY 84 (95)
T ss_dssp TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHHHHH
T ss_pred cCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHHHHH
Confidence 478888888887 5899999999999888887655322 333333333333568999987543 1 27899
Q ss_pred HhhccCCEEEE
Q 023273 230 KAVKEGGRVVS 240 (284)
Q Consensus 230 ~~l~~~G~~v~ 240 (284)
+.|+++|++++
T Consensus 85 rvLk~gG~l~~ 95 (95)
T PF08241_consen 85 RVLKPGGRLVI 95 (95)
T ss_dssp HHEEEEEEEEE
T ss_pred HHcCcCeEEeC
Confidence 99999999974
No 206
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.26 E-value=0.0072 Score=48.01 Aligned_cols=91 Identities=29% Similarity=0.390 Sum_probs=64.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-CCc--------------------ccc
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TKE--------------------NIE 209 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~~--------------------~~~ 209 (284)
..+|+|+| +|.+|..|+++++.+ |+++++.+..+++.+..+..+...+... ... .+.
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 47889999 899999999999997 9999999999999988888776543221 110 011
Q ss_pred cCCCcccEEEeCC---CC--c----HHHHHhhccCCEEEEEcC
Q 023273 210 DLPEKFDVVFDAV---GQ--C----DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 210 ~~~~~~d~vid~~---g~--~----~~~~~~l~~~G~~v~~g~ 243 (284)
+.-..+|++|.+. +. + +..++.|+++..++.++.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 1123689998653 21 2 788999998888888743
No 207
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.025 Score=48.08 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.++.+++|+|++|++|...++.+... |++|+++++++++.+.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 50 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEV 50 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999999988874 99999999987766544
No 208
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.022 Score=48.84 Aligned_cols=73 Identities=29% Similarity=0.328 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEe--eCCCc-ccccC-------CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAI--DYTKE-NIEDL-------PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~--~~~~~-~~~~~-------~~~~d~ 217 (284)
.+++++|+|++|++|.+.++.+... |.+|+++++++++.+.+.+.... ..+ |..+. .+... -+++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4578999999999999999888774 99999999988877665543221 112 22111 11111 236899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+++++|
T Consensus 82 vv~~ag 87 (277)
T PRK06180 82 LVNNAG 87 (277)
T ss_pred EEECCC
Confidence 999987
No 209
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.23 E-value=0.051 Score=50.21 Aligned_cols=73 Identities=27% Similarity=0.410 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh--hhHHHH-HHcCCcE-EeeCCCcc-ccc-------CCCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL-RSLGADL-AIDYTKEN-IED-------LPEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~-~~~-------~~~~~d~ 217 (284)
++++++|+|++|++|...++.+... |++++++++++ ++.+.+ ++++... ..|-.+.. ... ..+++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 5789999999999999999988874 99999988743 233322 3444322 22322211 111 1236999
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|+++|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999987
No 210
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.023 Score=47.95 Aligned_cols=42 Identities=29% Similarity=0.382 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|.+.++.+... |++|+++.+++++.+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 49 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL 49 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 4789999999999999999888874 99999999987766544
No 211
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.22 E-value=0.036 Score=40.11 Aligned_cols=86 Identities=22% Similarity=0.337 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---H
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D 226 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~ 226 (284)
.|.+|||+| .|.+|..-++.+... |++++++.... ...+ +.-.... ..+.+.-.++++|+-++++. +
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~--~~i~~~~---~~~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSE--GLIQLIR---REFEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHH--TSCEEEE---SS-GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhh--hHHHHHh---hhHHHHHhhheEEEecCCCHHHHH
Confidence 578999999 799999999988884 89999998875 2222 1111111 12233357899999999873 5
Q ss_pred HHHHhhccCCEEEEEcCCC
Q 023273 227 KALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~~ 245 (284)
.+.+..+..|.++......
T Consensus 76 ~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHhhCCEEEEECCCc
Confidence 5566666688888776443
No 212
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.22 E-value=0.017 Score=47.98 Aligned_cols=89 Identities=28% Similarity=0.387 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCCcccc---cCCCcccEEEeC--
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIE---DLPEKFDVVFDA-- 221 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~---~~~~~~d~vid~-- 221 (284)
-+|.+||-+|+.| |+++.-+|+. |+.|...+.+++..+.++..... ..+|+...... ..++.||+|+..
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV 133 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV 133 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence 5899999999544 5788888886 89999999999999888743221 12455543333 334689999864
Q ss_pred ---CCCc----HHHHHhhccCCEEEEE
Q 023273 222 ---VGQC----DKALKAVKEGGRVVSI 241 (284)
Q Consensus 222 ---~g~~----~~~~~~l~~~G~~v~~ 241 (284)
+.++ ..+.++++|+|.+++-
T Consensus 134 lEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 134 LEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 3333 5788999999998754
No 213
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.21 E-value=0.074 Score=42.86 Aligned_cols=94 Identities=23% Similarity=0.340 Sum_probs=61.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~ 217 (284)
....+.++++||-+|+ +.|..++.+++...+.+++.++.+++..+.+++ .+.. .++..+. .....+.+|+
T Consensus 25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~--~~~~~~~~D~ 100 (187)
T PRK08287 25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA--PIELPGKADA 100 (187)
T ss_pred HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc--hhhcCcCCCE
Confidence 4556778999999983 346777777776335799999999987776643 3322 2222211 1122457999
Q ss_pred EEeCCC--C----cHHHHHhhccCCEEEEE
Q 023273 218 VFDAVG--Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 218 vid~~g--~----~~~~~~~l~~~G~~v~~ 241 (284)
++.... . ...+.+.|+++|+++..
T Consensus 101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred EEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 886432 2 26788999999999763
No 214
>PLN03139 formate dehydrogenase; Provisional
Probab=96.19 E-value=0.052 Score=48.98 Aligned_cols=106 Identities=21% Similarity=0.290 Sum_probs=73.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----- 224 (284)
.|++|.|+| .|.+|...++.++. +|.++++.+++....+..++.+.... .++.+.....|+|+.+...
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~a-fG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKP-FNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHH-CCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 678999999 99999999999999 59999998876544444445553211 1244445678999887652
Q ss_pred ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273 225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (284)
Q Consensus 225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 274 (284)
-...+..|+++..+|.++-.. --+-+.+++.+++|+|.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~l~ 311 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARGA------------IMDTQAVADACSSGHIG 311 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCCc------------hhhHHHHHHHHHcCCce
Confidence 156888888888887665211 12345566666777764
No 215
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.03 Score=47.70 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~ 48 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA 48 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999999888874 99999999987776544
No 216
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.19 E-value=0.024 Score=45.13 Aligned_cols=91 Identities=21% Similarity=0.303 Sum_probs=63.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC--CcEEeeCCCcccccCCCcccEEEeCCCCc----
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--ADLAIDYTKENIEDLPEKFDVVFDAVGQC---- 225 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~d~vid~~g~~---- 225 (284)
..|.|+||+|..|...++-|+. +|..|+++++++.|....+... ...+++.. .+.+...|+|+||++.|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~-RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~--~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALK-RGHEVTAIVRNASKLAARQGVTILQKDIFDLT--SLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHh-CCCeeEEEEeChHhccccccceeecccccChh--hhHhhhcCCceEEEeccCCCCCh
Confidence 3688999999999999999998 4999999999999886542211 11222221 1223357999999998731
Q ss_pred --------HHHHHhhccC--CEEEEEcCCC
Q 023273 226 --------DKALKAVKEG--GRVVSIIGSV 245 (284)
Q Consensus 226 --------~~~~~~l~~~--G~~v~~g~~~ 245 (284)
+.++..|+.. -|+..+|+.+
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 3366677663 6888888764
No 217
>PLN03075 nicotianamine synthase; Provisional
Probab=96.19 E-value=0.092 Score=45.48 Aligned_cols=93 Identities=19% Similarity=0.160 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHHcC-C----cEEee---CCCcccccCCCcccEEE
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLG-A----DLAID---YTKENIEDLPEKFDVVF 219 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~~g-~----~~~~~---~~~~~~~~~~~~~d~vi 219 (284)
.+.++|+-+| +|+.++.++.+++.+ .+.+++.++.+++..+.+++.- . ..-+. .+..+.....+.||+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 3789999999 899999888888654 3567999999999888886533 1 11111 11111111236899998
Q ss_pred eCCC------C----cHHHHHhhccCCEEEEEc
Q 023273 220 DAVG------Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 220 d~~g------~----~~~~~~~l~~~G~~v~~g 242 (284)
-.+- . ++...+.|+++|.++.=.
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 7742 2 267889999999997543
No 218
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.024 Score=48.01 Aligned_cols=76 Identities=26% Similarity=0.326 Sum_probs=51.4
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc--EEe--eCCCc-cccc-------CCC
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD--LAI--DYTKE-NIED-------LPE 213 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~--~~~--~~~~~-~~~~-------~~~ 213 (284)
...++.+++|+|++|.+|..+++.+.. .|++|+++.+++++.+.+.+ .... .++ |..+. .+.. ...
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAE-AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345789999999999999999999888 49999999998776655543 2211 122 22111 1111 124
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
++|+||.++|
T Consensus 86 ~~d~vi~~ag 95 (264)
T PRK12829 86 GLDVLVNNAG 95 (264)
T ss_pred CCCEEEECCC
Confidence 7999999876
No 219
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.17 E-value=0.034 Score=49.96 Aligned_cols=93 Identities=26% Similarity=0.266 Sum_probs=64.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC--C--cEEeeCCCc-ccccCCCcccEEEeCCCCc-
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--A--DLAIDYTKE-NIEDLPEKFDVVFDAVGQC- 225 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g--~--~~~~~~~~~-~~~~~~~~~d~vid~~g~~- 225 (284)
++|||+| +|.+|..+++.+.+.+..+|++++++.++++.+.... . ...+|-.+. ...+.-+++|+||++...+
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 5799999 6999999999977642389999999999999887653 1 223343222 2333356779999998852
Q ss_pred --HHHHHhhccCCEEEEEcCCC
Q 023273 226 --DKALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 226 --~~~~~~l~~~G~~v~~g~~~ 245 (284)
..+-.|++.+=.++.++...
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCC
Confidence 44445666666666665543
No 220
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.063 Score=45.88 Aligned_cols=71 Identities=27% Similarity=0.375 Sum_probs=46.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc--E--EeeCCCc-ccc----c---CCCcc
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--L--AIDYTKE-NIE----D---LPEKF 215 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~--~~~~~~~-~~~----~---~~~~~ 215 (284)
++++|+|++|++|..+++.+... |++|+++.+++++.+.. +..+.. . ..|-.+. ... . ..+++
T Consensus 1 k~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 36899999999999998888774 89999988877665443 223322 1 1232211 111 1 13468
Q ss_pred cEEEeCCC
Q 023273 216 DVVFDAVG 223 (284)
Q Consensus 216 d~vid~~g 223 (284)
|++|+++|
T Consensus 80 d~lv~~ag 87 (272)
T PRK07832 80 DVVMNIAG 87 (272)
T ss_pred CEEEECCC
Confidence 99999987
No 221
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.026 Score=48.01 Aligned_cols=42 Identities=26% Similarity=0.461 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|.+.++..... |++|+++.+++++.+.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 48 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASA 48 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 5789999999999999999888874 99999999988776544
No 222
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.16 E-value=0.071 Score=45.28 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=65.7
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEeeCCCcccccCCCcccEEEeC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~d~vid~ 221 (284)
+....+.++++||-+|+ +.|..+..+++...+.+++.++.+++..+.+++... ..++..+...+. ....+|+|+..
T Consensus 24 l~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 100 (258)
T PRK01683 24 LARVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFAN 100 (258)
T ss_pred HhhCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEc
Confidence 34556788999999993 456777788876446899999999998888875432 223322222221 23579999865
Q ss_pred CC-----C----cHHHHHhhccCCEEEEE
Q 023273 222 VG-----Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 222 ~g-----~----~~~~~~~l~~~G~~v~~ 241 (284)
.. + +..+.+.|+++|++++.
T Consensus 101 ~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 101 ASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred cChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 43 2 36788899999999875
No 223
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.15 E-value=0.016 Score=49.83 Aligned_cols=89 Identities=30% Similarity=0.402 Sum_probs=69.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC-Cc-EEeeCCCcccccCCCcccEEEeCC---CC--
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-AD-LAIDYTKENIEDLPEKFDVVFDAV---GQ-- 224 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~~d~vid~~---g~-- 224 (284)
.+|.|+| .|.+|.-++.+|.-+ |++|.+++.+.+|++++..+- .. +++-++...+...-...|++|.++ |.
T Consensus 169 ~kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 169 AKVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred ccEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 4567778 799999999999996 999999999999999987543 33 233334444555567899999875 32
Q ss_pred ----cHHHHHhhccCCEEEEEc
Q 023273 225 ----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 ----~~~~~~~l~~~G~~v~~g 242 (284)
.+++++.|.+++.+|.+.
T Consensus 247 PkLvt~e~vk~MkpGsVivDVA 268 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVA 268 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEE
Confidence 378999999999999983
No 224
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.035 Score=47.02 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=33.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
+..+.+++|+||+|++|.+.++.+...++++|+++++++++
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~ 45 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP 45 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence 34677999999999999998877555345899999987765
No 225
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.031 Score=47.14 Aligned_cols=72 Identities=24% Similarity=0.369 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EE--eeCCCc-cccc-CCCcccEEEeC
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LA--IDYTKE-NIED-LPEKFDVVFDA 221 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~--~~~~~~-~~~~-~~~~~d~vid~ 221 (284)
+.++||+|++|++|...++.+... |++++++++++++.+.+++ .+.. .+ .|..+. .+.. ...++|++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence 458999999999999999988884 9999999998776555432 2221 11 122211 1211 13489999998
Q ss_pred CC
Q 023273 222 VG 223 (284)
Q Consensus 222 ~g 223 (284)
+|
T Consensus 81 ag 82 (257)
T PRK09291 81 AG 82 (257)
T ss_pred CC
Confidence 87
No 226
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.09 E-value=0.03 Score=48.00 Aligned_cols=73 Identities=26% Similarity=0.316 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCChhhHH---HH-HHcCCcEEeeCCCcc---ccc-------CCC
Q 023273 150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLD---LL-RSLGADLAIDYTKEN---IED-------LPE 213 (284)
Q Consensus 150 ~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~~~~~---~~-~~~g~~~~~~~~~~~---~~~-------~~~ 213 (284)
.++++||+|+++ ++|.+.++.+... |++|+++.++++..+ .+ ++.+....+..+-.+ ... ..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 578999999876 9999988888774 999998887653322 22 234432222211111 111 125
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
.+|++++++|
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 7999999876
No 227
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.09 E-value=0.024 Score=47.53 Aligned_cols=99 Identities=23% Similarity=0.306 Sum_probs=60.4
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d 216 (284)
+....++|++||-++ +++|..+..+++..+ ..+|++++.+++-++.+++ .+.. +.+..+...++-..+.+|
T Consensus 41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD 118 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFD 118 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EE
T ss_pred hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCcee
Confidence 345778999999987 466778888888742 3689999999998887754 2222 222223333333346799
Q ss_pred EEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
+|..+.| + ...+.+.|+|+|+++.+...
T Consensus 119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 9998777 1 37899999999999987543
No 228
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.08 E-value=0.029 Score=48.45 Aligned_cols=92 Identities=25% Similarity=0.349 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQC- 225 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~- 225 (284)
..+.+++|+| +|++|.+++..+... | .+|+++.++.++.+.+. ++.....+.. ..+.......+|+||+|+...
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 4567899999 699999999988885 7 78999999988876664 3332110111 111122346799999997631
Q ss_pred -------HHHHHhhccCCEEEEEcC
Q 023273 226 -------DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 226 -------~~~~~~l~~~G~~v~~g~ 243 (284)
....+++++...++.+-.
T Consensus 198 ~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 198 SGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEeec
Confidence 223467777777776644
No 229
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.035 Score=46.19 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA 46 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence 4689999999999999999988874 99999999988776544
No 230
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.031 Score=47.10 Aligned_cols=73 Identities=23% Similarity=0.402 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE--Ee--eCCCc-cccc----C---CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AI--DYTKE-NIED----L---PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~--~~~~~-~~~~----~---~~~~d~ 217 (284)
.+.+++|+|++|++|...++.+... |++|+++.++++..+...+..... .+ |-.+. .+.. . .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4779999999999999988888874 999999998876655444433211 22 21111 1111 1 246899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|.++|
T Consensus 93 vi~~ag 98 (255)
T PRK06841 93 LVNSAG 98 (255)
T ss_pred EEECCC
Confidence 999887
No 231
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.03 Score=47.21 Aligned_cols=41 Identities=24% Similarity=0.420 Sum_probs=34.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+++++|+|++|++|...++..... |.+|+++.+++++.+.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~ 41 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA 41 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 478999999999999999888884 99999999887766544
No 232
>PRK07574 formate dehydrogenase; Provisional
Probab=96.06 E-value=0.074 Score=48.00 Aligned_cols=106 Identities=20% Similarity=0.224 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-c---
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C--- 225 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-~--- 225 (284)
.|.+|.|+| .|.+|...++.++. +|.+|++.++.....+..++.+... ...+.+..+..|+|+-+... .
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~-fG~~V~~~dr~~~~~~~~~~~g~~~-----~~~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKP-FDVKLHYTDRHRLPEEVEQELGLTY-----HVSFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCchhhHhhcCcee-----cCCHHHHhhcCCEEEEcCCCCHHHH
Confidence 578999999 89999999999998 5999999998754444344444321 11234445678999888762 1
Q ss_pred ----HHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273 226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (284)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 274 (284)
...+..|+++..+|.++--. --+-+.+++.+++|+|.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG~------------iVDe~AL~~AL~sG~i~ 304 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARGK------------IVDRDAVVRALESGHLA 304 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCCc------------hhhHHHHHHHHHhCCcc
Confidence 56888899988887665211 12334555666666664
No 233
>PRK08017 oxidoreductase; Provisional
Probab=96.05 E-value=0.033 Score=46.91 Aligned_cols=71 Identities=23% Similarity=0.378 Sum_probs=50.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCCc-cc----ccC----CCcccEEEeC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NI----EDL----PEKFDVVFDA 221 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~----~~~----~~~~d~vid~ 221 (284)
++++|+|++|++|...++.+... |.+++++.+++++.+.+++.+...+ .|..+. .. ... .+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999998884 8999999999888887776664332 222211 11 111 2467888888
Q ss_pred CC
Q 023273 222 VG 223 (284)
Q Consensus 222 ~g 223 (284)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 234
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.04 E-value=0.12 Score=43.29 Aligned_cols=101 Identities=22% Similarity=0.250 Sum_probs=68.1
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH----HcCCcEEeeCCCcccccC--CCc
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDL--PEK 214 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~--~~~ 214 (284)
.+...++.||++|+-.| .+.|.+++.+|+..+. .+++..+..++..+.++ +++....+.....+..+. .+.
T Consensus 86 I~~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~ 163 (256)
T COG2519 86 IVARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEED 163 (256)
T ss_pred HHHHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccc
Confidence 33578999999999988 3567788888887644 68999999999887774 344333222211222221 347
Q ss_pred ccEEEeCCCC----cHHHHHhhccCCEEEEEcCC
Q 023273 215 FDVVFDAVGQ----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 215 ~d~vid~~g~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
+|.++==... .+.+.+.|.++|.++.+..+
T Consensus 164 vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 164 VDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred cCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 8976543443 37888999999999987633
No 235
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.03 Score=46.97 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...++.+... |.+|+++++++++.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~ 45 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV 45 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4679999999999999988888874 99999999988776554
No 236
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.03 E-value=0.081 Score=45.21 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=64.7
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcC-------Cc--EEeeCCCcccccCCC
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLG-------AD--LAIDYTKENIEDLPE 213 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g-------~~--~~~~~~~~~~~~~~~ 213 (284)
+...+.++++||-+|+ +.|..+..+++..+ ..+++.++.+++-++.+++.. .. ..+..+...++-..+
T Consensus 67 ~~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~ 144 (261)
T PLN02233 67 SWSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDC 144 (261)
T ss_pred HHhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCC
Confidence 3456788999999984 34556677777631 258999999999888775321 11 122222222222235
Q ss_pred cccEEEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273 214 KFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 214 ~~d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
.+|+|+...+ + +..+.+.|+++|+++++...
T Consensus 145 sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 145 YFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred CEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 6999876543 2 36899999999999887544
No 237
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.02 E-value=0.1 Score=42.68 Aligned_cols=73 Identities=21% Similarity=0.366 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCCCc-cccc--------CCCcccE
Q 023273 150 AGKSILVLGG-AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYTKE-NIED--------LPEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga-~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~~-~~~~--------~~~~~d~ 217 (284)
....|+|+|+ .|++|.+.+.-... .|+.|+++.++-+....+. ++|.. .-+|-..+ ...+ ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~-~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFAR-NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHh-CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4567888876 79999987766666 4999999999988887776 67732 22332221 1111 1456899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
.++++|
T Consensus 85 L~NNAG 90 (289)
T KOG1209|consen 85 LYNNAG 90 (289)
T ss_pred EEcCCC
Confidence 998887
No 238
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.039 Score=46.56 Aligned_cols=42 Identities=31% Similarity=0.504 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|...++..... |++|+++.+++++.+.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~ 46 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL 46 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4679999999999999988887774 99999999988776554
No 239
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.01 E-value=0.036 Score=48.71 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|++|..+++..... |.+|+++.+++++.+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~ 46 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAA 46 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 5778999999999999988887774 89999999988776544
No 240
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.042 Score=48.72 Aligned_cols=74 Identities=20% Similarity=0.318 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCcE-Ee--eCCC-cccccC-------CC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTK-ENIEDL-------PE 213 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~~-------~~ 213 (284)
..+.+++|+|++|++|..+++.+... |++|+++.+++++.+.+ ++.+... .+ |..+ +..... -+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 35679999999999999998888774 99999999988776544 2334322 12 2221 111111 24
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
.+|++|+++|
T Consensus 85 ~iD~lInnAg 94 (334)
T PRK07109 85 PIDTWVNNAM 94 (334)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 241
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.00 E-value=0.038 Score=51.69 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~ 224 (284)
+.++++|+|+| .|.+|++++++++.. |++|++.+..+++.+.+++.|... +.... . ......+|+|+.+.|-
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~-~-~~~l~~~D~VV~SpGi 80 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVAT-VSTSD-A-VQQIADYALVVTSPGF 80 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEE-EcCcc-h-HhHhhcCCEEEECCCC
Confidence 45789999999 899999999999985 999999998776666667777633 32211 1 1112468999999884
No 242
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.038 Score=46.97 Aligned_cols=73 Identities=27% Similarity=0.323 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCCc-ccccC-------CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTKE-NIEDL-------PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~-------~~~~d~ 217 (284)
.+++++|+|++|++|...++.+... |++|+++++++++.+.+ ++++.. ..+ |-.+. .+.+. .+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999888874 99999999987765544 344422 122 22111 11111 246899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+++++|
T Consensus 84 lv~~ag 89 (261)
T PRK08265 84 LVNLAC 89 (261)
T ss_pred EEECCC
Confidence 999877
No 243
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.98 E-value=0.039 Score=47.33 Aligned_cols=73 Identities=25% Similarity=0.466 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCCchHHHHHH-HHHHHhcCCeEEEEeCChhh----HHHHHHcCCcE--EeeCCC-cccc-------cCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAK----LDLLRSLGADL--AIDYTK-ENIE-------DLPE 213 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~-~~a~~~~g~~vi~~~~~~~~----~~~~~~~g~~~--~~~~~~-~~~~-------~~~~ 213 (284)
..|+.|||+|+++++|++.+ ++|+. |+++++.+.+++. .+.+++.|..+ ..|-++ ++.. +.-+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46999999999999998754 55553 8888888876553 34445555222 223221 1211 1245
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
.+|+++|++|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7999999998
No 244
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.97 E-value=0.044 Score=46.43 Aligned_cols=70 Identities=20% Similarity=0.301 Sum_probs=46.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCcEEeeCC--C-ccccc-------CCCcccEE
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYT--K-ENIED-------LPEKFDVV 218 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~--~-~~~~~-------~~~~~d~v 218 (284)
+++|+|+++++|.+.++..... |++|+++.+++++.+.+. +.+....+..+ + +...+ ..+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 7899999999999988887774 999999999877654442 22322222211 1 11111 13579999
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
|+++|
T Consensus 81 i~naG 85 (259)
T PRK08340 81 VWNAG 85 (259)
T ss_pred EECCC
Confidence 99877
No 245
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.041 Score=46.10 Aligned_cols=73 Identities=27% Similarity=0.401 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-cccc-------cCCCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENIE-------DLPEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~~-------~~~~~~d~ 217 (284)
++++++|+|++|++|...++.+... |++++++.+++++.+.. ++++.. ..+ |..+ .... +..+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5689999999999999999888874 99999999887766544 344432 122 2111 1111 11346899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|+++|
T Consensus 84 vi~~ag 89 (249)
T PRK06500 84 VFINAG 89 (249)
T ss_pred EEECCC
Confidence 999876
No 246
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.92 E-value=0.046 Score=46.43 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=31.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++++|+|++ +++|.++++..... |++|+++.++++.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~ 48 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKA 48 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhh
Confidence 57899999987 49999988887774 8999998887543
No 247
>PRK06194 hypothetical protein; Provisional
Probab=95.91 E-value=0.048 Score=46.91 Aligned_cols=42 Identities=29% Similarity=0.415 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.++||+|++|++|...++.+... |++|++++++.++.+..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 46 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRA 46 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence 4678999999999999988888774 99999999877665443
No 248
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.043 Score=46.48 Aligned_cols=42 Identities=31% Similarity=0.374 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|.++++..... |++|+++++++++.+.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~ 47 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA 47 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999998888774 99999999987766544
No 249
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.05 Score=46.04 Aligned_cols=42 Identities=17% Similarity=0.278 Sum_probs=35.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
+.+++|+|++|++|...++..... |++++++++++++.+...
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~ 43 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAFA 43 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 468999999999999988888774 999999999887766543
No 250
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.049 Score=46.25 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=36.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
++.+++|+|++|++|...+..+... |.+|+++++++++.+.+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~ 46 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEALA 46 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence 4678999999999999988888774 999999999887765553
No 251
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.87 E-value=0.054 Score=49.42 Aligned_cols=75 Identities=19% Similarity=0.300 Sum_probs=52.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~ 224 (284)
+--.+.+++|+| +|++|.+++..+... | .+++++.++.+|.+.+. +++....+..+ ++...-..+|+||+|+++
T Consensus 177 ~~l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 177 DNISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQLIKKADIIIAAVNV 252 (414)
T ss_pred cCccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHHHhccCCEEEECcCC
Confidence 334678999999 799999999888875 6 57888888888765554 45422233221 223334679999999997
Q ss_pred c
Q 023273 225 C 225 (284)
Q Consensus 225 ~ 225 (284)
+
T Consensus 253 ~ 253 (414)
T PRK13940 253 L 253 (414)
T ss_pred C
Confidence 4
No 252
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.052 Score=45.28 Aligned_cols=42 Identities=14% Similarity=0.179 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|+++++|++.+...... |++|+++.+++++.+.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~ 45 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDT 45 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence 4789999999999999988877774 99999999888776544
No 253
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.84 E-value=0.048 Score=46.00 Aligned_cols=41 Identities=27% Similarity=0.410 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
.+++++|+|++|.+|...++.+... |++|+++.+++++.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~ 49 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAA 49 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHH
Confidence 5789999999999999999888874 9999999988776543
No 254
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.061 Score=44.92 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=35.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
...++++|+|++|++|...+..+... |.+|+++++++++.+.+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 46 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEAL 46 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 34678999999999999999888874 89999999987765544
No 255
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.83 E-value=0.041 Score=46.54 Aligned_cols=74 Identities=27% Similarity=0.337 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEe--eCCC-ccccc----C---CCc
Q 023273 149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAI--DYTK-ENIED----L---PEK 214 (284)
Q Consensus 149 ~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~--~~~~-~~~~~----~---~~~ 214 (284)
..+++++|+|++ +++|.+.++..... |++|+++.++++..+.++++... ..+ |-.+ +.... . .+.
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 357899999988 79999988888774 99999988874433444443221 122 2111 11111 1 246
Q ss_pred ccEEEeCCC
Q 023273 215 FDVVFDAVG 223 (284)
Q Consensus 215 ~d~vid~~g 223 (284)
+|++++++|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 899998876
No 256
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.82 E-value=0.062 Score=45.05 Aligned_cols=73 Identities=27% Similarity=0.404 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCc-EEe--eCCC-cccc----c---CCCccc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGAD-LAI--DYTK-ENIE----D---LPEKFD 216 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~-~~~--~~~~-~~~~----~---~~~~~d 216 (284)
.+++++|+|++|++|...++.+... |++|+++.+++. ..+.+++.+.. ..+ |-.+ +.+. . ..+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999988888874 999999987642 12333444422 122 2111 1111 1 124699
Q ss_pred EEEeCCC
Q 023273 217 VVFDAVG 223 (284)
Q Consensus 217 ~vid~~g 223 (284)
++|+++|
T Consensus 83 ~li~~ag 89 (248)
T TIGR01832 83 ILVNNAG 89 (248)
T ss_pred EEEECCC
Confidence 9999876
No 257
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=95.82 E-value=0.21 Score=41.49 Aligned_cols=98 Identities=26% Similarity=0.241 Sum_probs=63.4
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHcCC-------cEEeeCCCcccccCCCcc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGA-------DLAIDYTKENIEDLPEKF 215 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~ 215 (284)
......++.+|+.+| +|. |..+..+++... ..++++++.+++..+.+++.-. ..++..+........+.+
T Consensus 45 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 122 (239)
T PRK00216 45 KWLGVRPGDKVLDLA-CGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNSF 122 (239)
T ss_pred HHhCCCCCCeEEEeC-CCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCCc
Confidence 344566788999999 555 778888888731 3899999999888777765321 112222211122223569
Q ss_pred cEEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273 216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 216 d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (284)
|+|+.... . +..+.+.|+++|+++++..
T Consensus 123 D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 123 DAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred cEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 98875432 2 2678889999999987754
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.044 Score=45.97 Aligned_cols=42 Identities=29% Similarity=0.387 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...++..... |.+++++.+++++...+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~ 46 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERV 46 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5688999999999999999888874 99999999987655433
No 259
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.81 E-value=0.062 Score=45.03 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=35.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
++++++|+|++|++|..+++.+... |++++++++++++.+..
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~ 45 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEA 45 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999999988884 89999999887665443
No 260
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.056 Score=46.02 Aligned_cols=42 Identities=33% Similarity=0.513 Sum_probs=35.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
.++.+++|+|++|++|...++.+... |++|+++++++++.+.
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~ 48 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDA 48 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 36789999999999999999888874 9999999988776543
No 261
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.80 E-value=0.25 Score=40.64 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=61.9
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcE--EeeCCC-cccccCCCcc
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTK-ENIEDLPEKF 215 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~-~~~~~~~~~~ 215 (284)
+...+++++++||-+|+ +.|..+..+++. ..+++.++.+++..+.+++ .+... ++..+. ..+. ..+.|
T Consensus 71 ~~~l~~~~~~~VLeiG~--GsG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~f 145 (212)
T PRK00312 71 TELLELKPGDRVLEIGT--GSGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPF 145 (212)
T ss_pred HHhcCCCCCCEEEEECC--CccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCc
Confidence 35677889999999983 346666666665 3489999998887766643 33322 222211 1111 12579
Q ss_pred cEEEeCCC--C-cHHHHHhhccCCEEEEEcC
Q 023273 216 DVVFDAVG--Q-CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 216 d~vid~~g--~-~~~~~~~l~~~G~~v~~g~ 243 (284)
|+|+.... . +....+.|+++|+++..-.
T Consensus 146 D~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 146 DRILVTAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred CEEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 98876543 2 4778899999999987644
No 262
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.80 E-value=0.045 Score=47.19 Aligned_cols=92 Identities=22% Similarity=0.331 Sum_probs=57.4
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHH-cCCcE-EeeC-CCcccccCCCcccEEEeCCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS-LGADL-AIDY-TKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~-~g~~~-~~~~-~~~~~~~~~~~~d~vid~~g 223 (284)
..++++++|+| +|+.+.+++..++.. | .+++++.|+.+|.+.+.+ ++... .+.. ...++... ..+|++||++.
T Consensus 123 ~~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~-~~~dliINaTp 199 (283)
T COG0169 123 DVTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL-EEADLLINATP 199 (283)
T ss_pred ccCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc-cccCEEEECCC
Confidence 34689999999 799999988888885 6 689999999988776653 33211 0011 00111111 15999999976
Q ss_pred C---cH-----HHHHhhccCCEEEEEc
Q 023273 224 Q---CD-----KALKAVKEGGRVVSII 242 (284)
Q Consensus 224 ~---~~-----~~~~~l~~~G~~v~~g 242 (284)
. .. ....++++.-.+..+-
T Consensus 200 ~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 200 VGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 2 11 1145666666665553
No 263
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.049 Score=47.49 Aligned_cols=41 Identities=24% Similarity=0.261 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
.+++++|+|++|++|..+++..... |.+++++.++.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 6789999999999999988877774 8999999988776543
No 264
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.057 Score=45.20 Aligned_cols=43 Identities=30% Similarity=0.356 Sum_probs=35.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.++.+++|+|++|++|...+...... |++++++.+++++....
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 47 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEAREL 47 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999999888874 99999998887765543
No 265
>PRK08589 short chain dehydrogenase; Validated
Probab=95.75 E-value=0.053 Score=46.41 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
.++++||+|+++++|.+.++..... |++|+++.+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~~ 40 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIAE 40 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCcH
Confidence 5789999999999999988887774 99999999883
No 266
>PRK05717 oxidoreductase; Validated
Probab=95.75 E-value=0.058 Score=45.56 Aligned_cols=73 Identities=21% Similarity=0.303 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-EEe--eCCC-ccc----ccC---CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTK-ENI----EDL---PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~-~~~----~~~---~~~~d~ 217 (284)
.|++++|+|++|.+|...+...... |++|++++++.++.... ++++.. ..+ |-.+ +.. .+. .+.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999999999999988888774 89999998876655443 334422 112 2111 111 111 236899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|.++|
T Consensus 88 li~~ag 93 (255)
T PRK05717 88 LVCNAA 93 (255)
T ss_pred EEECCC
Confidence 999876
No 267
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.053 Score=45.80 Aligned_cols=73 Identities=22% Similarity=0.299 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCc-EEee--CCC-cccccC-------CCcc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGAD-LAID--YTK-ENIEDL-------PEKF 215 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~-~~~~--~~~-~~~~~~-------~~~~ 215 (284)
.+.+++|+|++|++|...++..... |++++++.+++++.+..++ .+.. ..+. ..+ +..... .+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999988887774 8999999887776543333 3322 1222 111 111111 2478
Q ss_pred cEEEeCCC
Q 023273 216 DVVFDAVG 223 (284)
Q Consensus 216 d~vid~~g 223 (284)
|++|.++|
T Consensus 85 d~vi~~ag 92 (258)
T PRK08628 85 DGLVNNAG 92 (258)
T ss_pred CEEEECCc
Confidence 99999987
No 268
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.74 E-value=0.062 Score=46.18 Aligned_cols=93 Identities=20% Similarity=0.294 Sum_probs=59.2
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCChh---hHHHH-HHcCCcEEe--eCCCc-cccc-------CCC
Q 023273 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLAI--DYTKE-NIED-------LPE 213 (284)
Q Consensus 150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~~~--~~~~~-~~~~-------~~~ 213 (284)
.+++++|+|++ +++|+++++..... |++|+++.++++ +.+.+ ++++....+ |-.+. .... ..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 47899999986 79999988887774 999999888743 33333 334432222 22111 1111 135
Q ss_pred cccEEEeCCCC--------c------------------------HHHHHhhccCCEEEEEcC
Q 023273 214 KFDVVFDAVGQ--------C------------------------DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 214 ~~d~vid~~g~--------~------------------------~~~~~~l~~~G~~v~~g~ 243 (284)
.+|++++++|. + +.++..|.++|+++.++.
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 144 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY 144 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence 78999998762 0 235566777899998754
No 269
>PRK08643 acetoin reductase; Validated
Probab=95.71 E-value=0.06 Score=45.44 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=34.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+++++|+|++|++|...++.+... |++|+++++++++.+.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 42 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAA 42 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 568999999999999999888874 99999999887765444
No 270
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.069 Score=45.19 Aligned_cols=42 Identities=24% Similarity=0.403 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|...++..... |++|+++.+++++.+.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 47 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEAL 47 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988888774 89999999987766543
No 271
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.066 Score=45.97 Aligned_cols=43 Identities=23% Similarity=0.299 Sum_probs=35.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
-.+++++|+|++|++|.+.++.+... |++|+++++++++.+.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~ 46 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQA 46 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 35789999999999999988888774 99999999887765543
No 272
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.02 Score=48.84 Aligned_cols=71 Identities=21% Similarity=0.407 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE-EeeCCC-ccccc-------CCCcccEEEe
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTK-ENIED-------LPEKFDVVFD 220 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~-------~~~~~d~vid 220 (284)
.+++++|+|++|++|...++.+... |++|+++++++++.+... +... ..|..+ +.+.. ..+.+|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999999999999988887774 999999998766543221 1111 122211 11111 1346899999
Q ss_pred CCC
Q 023273 221 AVG 223 (284)
Q Consensus 221 ~~g 223 (284)
++|
T Consensus 80 ~ag 82 (270)
T PRK06179 80 NAG 82 (270)
T ss_pred CCC
Confidence 987
No 273
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.069 Score=44.78 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=34.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+.+++|+|++|++|...++..... |++++++++++++.+.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 42 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL 42 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988877774 89999999988776554
No 274
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.033 Score=46.26 Aligned_cols=39 Identities=28% Similarity=0.416 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~ 189 (284)
++++++|+|++|.+|..+++.+... |++|+++++++++.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~ 44 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPL 44 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhH
Confidence 4789999999999999999888874 99999999976654
No 275
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.063 Score=45.19 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|++|.+.++.+... |.+|+++++++++.+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~ 48 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAV 48 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4678999999999999999988884 99999999887765444
No 276
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.68 E-value=0.07 Score=44.43 Aligned_cols=71 Identities=18% Similarity=0.297 Sum_probs=46.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHHcCCcEEe--eCCC-ccccc-------CCCcccEEE
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAI--DYTK-ENIED-------LPEKFDVVF 219 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~--~~~~-~~~~~-------~~~~~d~vi 219 (284)
+++++|+|+++++|...++..... |++|+++++++++ .+.+++.+.. .+ |-.+ +.... ..+++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 468999999999999999887774 9999999886653 2333444422 22 2111 11111 124689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
+++|
T Consensus 80 ~~ag 83 (236)
T PRK06483 80 HNAS 83 (236)
T ss_pred ECCc
Confidence 9887
No 277
>PRK04266 fibrillarin; Provisional
Probab=95.68 E-value=0.18 Score=42.15 Aligned_cols=126 Identities=20% Similarity=0.210 Sum_probs=70.7
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCcEEeeCCCcc---cccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKEN---IEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~---~~~~~~~~d 216 (284)
+..++++|++|+-+|+ +.|..+..+++.....+|++++.+++.++.+.+ ......+..+... .....+.+|
T Consensus 66 ~~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D 143 (226)
T PRK04266 66 KNFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD 143 (226)
T ss_pred hhCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence 3578899999999984 334456666665423589999999976664432 2111222211111 112234699
Q ss_pred EEEeCCCC-------cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCeeE
Q 023273 217 VVFDAVGQ-------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA 275 (284)
Q Consensus 217 ~vid~~g~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 275 (284)
+++..... .+.+.+.|+++|+++++ .+.. ..++.. ...+.+++.++++++..++.
T Consensus 144 ~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~-v~~~--~~d~~~-~~~~~~~~~~~~l~~aGF~~ 205 (226)
T PRK04266 144 VIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA-IKAR--SIDVTK-DPKEIFKEEIRKLEEGGFEI 205 (226)
T ss_pred EEEECCCChhHHHHHHHHHHHhcCCCcEEEEE-Eecc--cccCcC-CHHHHHHHHHHHHHHcCCeE
Confidence 99854432 25677799999999984 2211 111111 11233455567776544544
No 278
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.67 E-value=0.12 Score=42.77 Aligned_cols=91 Identities=18% Similarity=0.133 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCc-----------------EEeeCCCccccc
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-----------------LAIDYTKENIED 210 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~-----------------~~~~~~~~~~~~ 210 (284)
.++.+||+.| .+.|.-++.+|.. |.+|+.++.++.-++.+ ++.+.. .++..+-..+..
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 5778999998 3678889999874 99999999999987765 333211 001111111111
Q ss_pred -CCCcccEEEeCCC--C---------cHHHHHhhccCCEEEEEcC
Q 023273 211 -LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 211 -~~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~g~ 243 (284)
..+.+|.++|+.. . ...+.++|+++|++++.+.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 1246899999753 1 2578999999998766644
No 279
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.07 Score=44.98 Aligned_cols=43 Identities=30% Similarity=0.421 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
..+.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 45 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV 45 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 45789999999999999998888874 99999999987765544
No 280
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.65 E-value=0.047 Score=47.21 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcCCc-EEeeCCC-cccccCCCcccEEEeCCCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGAD-LAIDYTK-ENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~~~~~~~~~d~vid~~g~ 224 (284)
.+.+++|+| +|+.+.+++..+..+ |+ +++++.++.+|.+.+. +++.. .+..... +........+|+||+|+..
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~ 200 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA 200 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence 578999999 799999988888775 65 7889999988876664 33321 1111110 1122223579999999863
No 281
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.064 Score=45.42 Aligned_cols=71 Identities=30% Similarity=0.425 Sum_probs=48.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cC-C-cEE--eeCCC-ccccc----C----CCcccE
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LG-A-DLA--IDYTK-ENIED----L----PEKFDV 217 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g-~-~~~--~~~~~-~~~~~----~----~~~~d~ 217 (284)
++++|+|++|++|...++.+... |.+|+++++++++.+.+.+ .+ . ..+ .|-.+ +.+.+ . .+.+|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47999999999999998887774 9999999998887766643 22 1 112 22221 11111 1 346899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
++.++|
T Consensus 81 vi~~ag 86 (260)
T PRK08267 81 LFNNAG 86 (260)
T ss_pred EEECCC
Confidence 999987
No 282
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.63 E-value=0.032 Score=50.76 Aligned_cols=73 Identities=26% Similarity=0.377 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCC-cEEe--eCCC-cccccCCCcccEEEeCCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA-DLAI--DYTK-ENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~-~~~~--~~~~-~~~~~~~~~~d~vid~~g 223 (284)
.+++++|+||+|++|.+.++..... |.+|+++++++++.+... +... ...+ |-.+ +...+.-+++|++|+++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 4789999999999999988877774 999999998776654322 1111 1122 2211 122223457999998876
No 283
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=95.61 E-value=0.17 Score=42.17 Aligned_cols=98 Identities=24% Similarity=0.241 Sum_probs=63.3
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHHc----CCc--EEeeCCCcccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~d 216 (284)
....++++++||-+|+ +.|..+..+++..+ +.+++.++.+++..+.+++. +.. .++..+...+.-..+.+|
T Consensus 39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 116 (231)
T TIGR02752 39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFD 116 (231)
T ss_pred HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCcc
Confidence 4567788999999984 45667777777632 46899999998887766532 222 222222222221235799
Q ss_pred EEEeCCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (284)
+|+.+.. . ++.+.+.|+++|+++....
T Consensus 117 ~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 117 YVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 9876432 1 2567889999999987643
No 284
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.61 E-value=0.068 Score=45.76 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~ 50 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAV 50 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999999888774 99999999887655433
No 285
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.076 Score=45.46 Aligned_cols=72 Identities=24% Similarity=0.310 Sum_probs=48.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEeeCCCc---cccc-------CCCcccEE
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKE---NIED-------LPEKFDVV 218 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~---~~~~-------~~~~~d~v 218 (284)
+.+++|+|++|++|..+++.+... |.+|+++++++++.+.+.+ .+.. ..+..+-. .+.. ..+++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999999999999988888774 8999999998877665543 2211 12221111 1111 12478999
Q ss_pred EeCCC
Q 023273 219 FDAVG 223 (284)
Q Consensus 219 id~~g 223 (284)
|.++|
T Consensus 82 i~~ag 86 (275)
T PRK08263 82 VNNAG 86 (275)
T ss_pred EECCC
Confidence 99987
No 286
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.59 E-value=0.079 Score=44.67 Aligned_cols=42 Identities=29% Similarity=0.468 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.++++||+|++|++|.+.++..... |++++++++++++.+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~ 49 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELA 49 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH
Confidence 5779999999999999998888874 99999999887765443
No 287
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.59 E-value=0.075 Score=44.68 Aligned_cols=71 Identities=24% Similarity=0.389 Sum_probs=48.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-EEe--eCCC-ccccc-------CCCcccEEE
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAI--DYTK-ENIED-------LPEKFDVVF 219 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~--~~~~-~~~~~-------~~~~~d~vi 219 (284)
++++|+|++|++|.+.++.+... |++|+++++++++.+.+.. ++.. ..+ |-.+ +.+.+ ..+++|+++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 36899999999999999988884 9999999998887765543 3322 122 2111 11111 124799999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.++|
T Consensus 80 ~~ag 83 (248)
T PRK10538 80 NNAG 83 (248)
T ss_pred ECCC
Confidence 8876
No 288
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.59 E-value=0.11 Score=45.96 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---cEEeeCCCcccccCCCcccEEEeCCC--
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG-- 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~d~vid~~g-- 223 (284)
.++.+||-+| +|. |..+..+++...+.+++.++.+++-.+.+++... ..++..+.....-..+.+|+|+.+..
T Consensus 112 ~~~~~VLDLG-cGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~ 189 (340)
T PLN02490 112 DRNLKVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIE 189 (340)
T ss_pred CCCCEEEEEe-cCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhh
Confidence 4688999998 444 7677777776445789999999887777765321 11222211111112346999887532
Q ss_pred ---C----cHHHHHhhccCCEEEEEcC
Q 023273 224 ---Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 224 ---~----~~~~~~~l~~~G~~v~~g~ 243 (284)
+ ++.+.+.|+++|++++++.
T Consensus 190 ~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 190 YWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1 2678899999999987753
No 289
>PLN02253 xanthoxin dehydrogenase
Probab=95.59 E-value=0.066 Score=45.90 Aligned_cols=42 Identities=29% Similarity=0.386 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|++|++|.+.++..... |++|+++++++++.+.+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~ 58 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNV 58 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999988877774 99999998876655443
No 290
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.58 E-value=0.072 Score=45.00 Aligned_cols=42 Identities=24% Similarity=0.355 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|..+++.+... |.+|+++.+++++.+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 47 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAV 47 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Confidence 4789999999999999998888874 99999999987665443
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.58 E-value=0.074 Score=45.21 Aligned_cols=37 Identities=32% Similarity=0.271 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
..+++++|+|+++ ++|.+.++.+... |++|++..+++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~ 44 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE 44 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence 4578999999886 8999988777663 89998887764
No 292
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.58 E-value=0.21 Score=42.73 Aligned_cols=99 Identities=13% Similarity=0.172 Sum_probs=65.2
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--cE--EeeCCCcccccCCCcccE
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DL--AIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--~~--~~~~~~~~~~~~~~~~d~ 217 (284)
++...++.++.+||-+| +| .|..+..+++. .+++++.++.+++..+.+++... .. +...+....+-..+.||+
T Consensus 44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~ 120 (263)
T PTZ00098 44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEK-YGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDM 120 (263)
T ss_pred HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhh-cCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEE
Confidence 44667889999999998 44 46566777776 48899999999988887765321 11 111111111111356999
Q ss_pred EEeCC-----C--C----cHHHHHhhccCCEEEEEcC
Q 023273 218 VFDAV-----G--Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 218 vid~~-----g--~----~~~~~~~l~~~G~~v~~g~ 243 (284)
|+... . . ++.+.+.|+|+|++++...
T Consensus 121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 98631 1 1 2577899999999998754
No 293
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.58 E-value=0.059 Score=45.56 Aligned_cols=73 Identities=29% Similarity=0.364 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---cCCcE-E--eeCCCc-cccc-------CCCcc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADL-A--IDYTKE-NIED-------LPEKF 215 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~g~~~-~--~~~~~~-~~~~-------~~~~~ 215 (284)
.+++++|+|++|++|.+.++.+... |++|+++++++...+..++ .+.+. . .|..+. .... ..+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999988888774 9999999887543333222 23221 1 222211 1111 12479
Q ss_pred cEEEeCCC
Q 023273 216 DVVFDAVG 223 (284)
Q Consensus 216 d~vid~~g 223 (284)
|++++++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999886
No 294
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.57 E-value=0.075 Score=44.96 Aligned_cols=42 Identities=29% Similarity=0.478 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|++|...++..... |++|++++++.++.+..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 52 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA 52 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 5789999999999999999888874 99999999987766544
No 295
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.062 Score=44.59 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=46.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE-eeCCC-ccccc----CCCcccEEEeCCC
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTK-ENIED----LPEKFDVVFDAVG 223 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~~----~~~~~d~vid~~g 223 (284)
+++|+|++|++|.+.++..... |++++++.+++++.+.+. +.+...+ .|-.+ +.+.+ ..+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899999999999998888774 999999999888776553 3333211 22211 11111 1236898888754
No 296
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.56 E-value=0.073 Score=44.01 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=67.3
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE-E--eeC-C-Cccccc-CCC
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL-A--IDY-T-KENIED-LPE 213 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~-~--~~~-~-~~~~~~-~~~ 213 (284)
..+.+..+++|-+| +.+|+.++.+|..+. ..+++.++.++++.+.+++ .|... + +.. + .+.+.+ ..+
T Consensus 54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence 45566889999998 678999999999875 4689999999999888864 45433 2 221 1 111222 256
Q ss_pred cccEE-EeCCCC-----cHHHHHhhccCCEEEEE
Q 023273 214 KFDVV-FDAVGQ-----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 214 ~~d~v-id~~g~-----~~~~~~~l~~~G~~v~~ 241 (284)
.||+| ||+.-. ++.++++|+++|.++.=
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 89986 576542 38999999999999854
No 297
>PRK08264 short chain dehydrogenase; Validated
Probab=95.56 E-value=0.062 Score=44.75 Aligned_cols=71 Identities=23% Similarity=0.393 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHHcCCc-EEe--eCCC-cccccC---CCcccEEEeC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD-LAI--DYTK-ENIEDL---PEKFDVVFDA 221 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~~g~~-~~~--~~~~-~~~~~~---~~~~d~vid~ 221 (284)
.+.+++|+|++|.+|...++.+... |. +|+++++++++.+. .+.. .++ |..+ +.+... .+.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999999999999999888874 88 99999988766543 2211 122 2211 111111 2358999998
Q ss_pred CCC
Q 023273 222 VGQ 224 (284)
Q Consensus 222 ~g~ 224 (284)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 764
No 298
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.074 Score=45.61 Aligned_cols=76 Identities=26% Similarity=0.316 Sum_probs=46.7
Q ss_pred ccCCCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCCh---hhHHHH-HHcCCcEEeeCCCcc---ccc-------
Q 023273 147 AFSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLL-RSLGADLAIDYTKEN---IED------- 210 (284)
Q Consensus 147 ~~~~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~~---~~~~~~-~~~g~~~~~~~~~~~---~~~------- 210 (284)
+...+++++|+|++ +++|++.++..... |++|+++.+++ ++.+.+ ++++....+..+-.+ ...
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence 34567899999986 79999988887774 99998877653 333333 234432222211111 111
Q ss_pred CCCcccEEEeCCC
Q 023273 211 LPEKFDVVFDAVG 223 (284)
Q Consensus 211 ~~~~~d~vid~~g 223 (284)
.-+.+|++++++|
T Consensus 85 ~~g~iD~lv~nAG 97 (272)
T PRK08159 85 KWGKLDFVVHAIG 97 (272)
T ss_pred hcCCCcEEEECCc
Confidence 1246899998875
No 299
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.077 Score=44.66 Aligned_cols=41 Identities=34% Similarity=0.409 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
.+++++|+|++|++|...+..+... |++|+++.+++++.+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~ 46 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEE 46 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHH
Confidence 4789999999999999988877774 8999999998776543
No 300
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.52 E-value=0.072 Score=45.32 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=29.5
Q ss_pred CCCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 149 SAGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 149 ~~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
..+++++|+|+ ++++|.+.++..... |++|++..+.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~ 42 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVD 42 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 35789999996 679999988887774 99998876654
No 301
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.52 E-value=0.075 Score=44.91 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=34.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+++++|+|++|.+|...+...... |+++++++++.++.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~ 42 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANV 42 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 568999999999999998888874 99999999877655433
No 302
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.078 Score=45.30 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
++++++|+|++|.+|...++.+... |++|+++.+++++.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 47 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAA 47 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 4789999999999999999988884 99999999887665433
No 303
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.50 E-value=0.097 Score=42.90 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc--H
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--D 226 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~ 226 (284)
.|.+|+|+| +|.+|...+...... |++|+++..... .+..+.+.+.- .+...... ...-.++|+||-++++. +
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~~~i-~~~~~~~~-~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEEGKI-RWKQKEFE-PSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhCCCE-EEEecCCC-hhhcCCceEEEEcCCCHHHH
Confidence 578999999 799999888877774 888888865321 22222222211 11111111 11135799999999873 4
Q ss_pred HHHHhhccCCEEEEEc
Q 023273 227 KALKAVKEGGRVVSII 242 (284)
Q Consensus 227 ~~~~~l~~~G~~v~~g 242 (284)
..+...+..+.++.+.
T Consensus 85 ~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 85 EQVKEDLPENALFNVI 100 (202)
T ss_pred HHHHHHHHhCCcEEEC
Confidence 4444444445555553
No 304
>PLN00203 glutamyl-tRNA reductase
Probab=95.50 E-value=0.22 Score=46.80 Aligned_cols=92 Identities=22% Similarity=0.338 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcC-Cc-EEeeCCCcccccCCCcccEEEeCCCCc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG-AD-LAIDYTKENIEDLPEKFDVVFDAVGQC 225 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g-~~-~~~~~~~~~~~~~~~~~d~vid~~g~~ 225 (284)
.+.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+. +++ .. .+... ++......+.|+||.|+++.
T Consensus 265 ~~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~~--~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 265 ASARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKPL--DEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeecH--hhHHHHHhcCCEEEEccCCC
Confidence 368999999 799999999988885 75 7889999988876665 443 21 11111 12223346799999998752
Q ss_pred -----HHHHHhhcc----CC---EEEEEcCCC
Q 023273 226 -----DKALKAVKE----GG---RVVSIIGSV 245 (284)
Q Consensus 226 -----~~~~~~l~~----~G---~~v~~g~~~ 245 (284)
...++.+.+ .| .++.++.|.
T Consensus 341 ~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 341 TPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 444444422 12 366667664
No 305
>PRK06720 hypothetical protein; Provisional
Probab=95.49 E-value=0.12 Score=41.14 Aligned_cols=40 Identities=28% Similarity=0.368 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD 190 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~ 190 (284)
.+..++|+|+++++|...+...... |.+++++++++++.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHH
Confidence 5789999999999999988877774 899999998766543
No 306
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.21 Score=41.58 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
++.+++|+|++|++|...++..... |.+++++.++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAGS 39 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCC
Confidence 5689999999999999999888874 88888776643
No 307
>PRK09242 tropinone reductase; Provisional
Probab=95.45 E-value=0.095 Score=44.24 Aligned_cols=42 Identities=19% Similarity=0.345 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|++|++|...+..+... |++++++.+++++.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~ 49 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA 49 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999999888874 99999999987766544
No 308
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.45 E-value=0.075 Score=44.88 Aligned_cols=43 Identities=33% Similarity=0.382 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
.+.+++|+|++|++|...++.+... |.+|++++++.++.+.+.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~ 47 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAA 47 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH
Confidence 4678999999999999999888874 999999999887765554
No 309
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.45 E-value=0.12 Score=45.40 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-c--
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C-- 225 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~-~-- 225 (284)
..|.+|.|+| .|.+|...++.++. +|.+|++.++..++.. +..... ....+.+.....|+|+.+... .
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~a-fG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQT-WGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHH
Confidence 3678999999 99999999999998 5999999987554321 111111 122344445778999988762 1
Q ss_pred -----HHHHHhhccCCEEEEEc
Q 023273 226 -----DKALKAVKEGGRVVSII 242 (284)
Q Consensus 226 -----~~~~~~l~~~G~~v~~g 242 (284)
...+++|+++..+|.++
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECC
Confidence 46788999998888776
No 310
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.074 Score=45.56 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...+..+... |++|+++++++++.+..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 43 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL 43 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 3578999999999999999888874 99999999887766544
No 311
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.44 E-value=0.048 Score=42.66 Aligned_cols=72 Identities=18% Similarity=0.312 Sum_probs=44.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC--hhhHHHH----HHcCCc-EEeeCCCcc---ccc-------CCCc
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS--TAKLDLL----RSLGAD-LAIDYTKEN---IED-------LPEK 214 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~--~~~~~~~----~~~g~~-~~~~~~~~~---~~~-------~~~~ 214 (284)
++++|+|+++++|+..++.....++.+++++.++ .++.+.+ ++.+.. .++..+-.+ ... ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999998887776434567777777 3444333 334422 222211111 111 1357
Q ss_pred ccEEEeCCC
Q 023273 215 FDVVFDAVG 223 (284)
Q Consensus 215 ~d~vid~~g 223 (284)
+|++|.++|
T Consensus 81 ld~li~~ag 89 (167)
T PF00106_consen 81 LDILINNAG 89 (167)
T ss_dssp ESEEEEECS
T ss_pred ccccccccc
Confidence 999999988
No 312
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.089 Score=44.98 Aligned_cols=71 Identities=23% Similarity=0.339 Sum_probs=47.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCc-EE--eeCCCc-cccc-------CCCcccEEE
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GAD-LA--IDYTKE-NIED-------LPEKFDVVF 219 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~-~~--~~~~~~-~~~~-------~~~~~d~vi 219 (284)
.++||+|++|.+|...++.+... |.+|+++.+++++.+.+++. +.. .+ .|..+. .+.+ ..+++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999999999999988887774 89999999988877665432 221 11 122111 1111 124689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.++|
T Consensus 82 ~~ag 85 (276)
T PRK06482 82 SNAG 85 (276)
T ss_pred ECCC
Confidence 9887
No 313
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.098 Score=44.29 Aligned_cols=41 Identities=27% Similarity=0.468 Sum_probs=33.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+.+++|+|++|++|..+++.+... |++|+++++++++.+.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~ 41 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASL 41 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 357999999999999999888874 89999999987665433
No 314
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.084 Score=44.19 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=35.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL 195 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~ 195 (284)
.+++|+|++|++|...++..... |++|+++++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh
Confidence 47899999999999877777774 99999999998887766543
No 315
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.41 E-value=0.054 Score=52.43 Aligned_cols=73 Identities=21% Similarity=0.407 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---------------------hHHHHHHcCCcEEeeCCC---
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK--- 205 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~--- 205 (284)
.+++|+|+| +|+.|+.++..++.. |.+|++++..+. +.+.++++|.+..++..-
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 386 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD 386 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence 489999999 899999999999985 999999987653 445667778665555431
Q ss_pred cccccCCCcccEEEeCCCC
Q 023273 206 ENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 206 ~~~~~~~~~~d~vid~~g~ 224 (284)
..+.+...++|.+|.++|.
T Consensus 387 ~~~~~l~~~~DaV~latGa 405 (639)
T PRK12809 387 ITFSDLTSEYDAVFIGVGT 405 (639)
T ss_pred CCHHHHHhcCCEEEEeCCC
Confidence 1222334579999999885
No 316
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.1 Score=43.99 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (284)
.+.+++|+|+++++|.+.++..... |+++++++++++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~ 43 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD 43 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 5779999999999999999988874 999999988643
No 317
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.39 E-value=0.093 Score=43.96 Aligned_cols=42 Identities=21% Similarity=0.319 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
++.++||+|++|.+|...++.+.. .|.+|++++++.++...+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~-~g~~v~~~~r~~~~~~~~ 43 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAE-EGAKVAVFDLNREAAEKV 43 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEecCCHHHHHHH
Confidence 468899999999999999988887 489999998877765444
No 318
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.075 Score=44.77 Aligned_cols=38 Identities=26% Similarity=0.485 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++++|+|++|++|...++.+... |++++++++++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~ 42 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence 5789999999999999988888774 9999999987654
No 319
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.094 Score=44.41 Aligned_cols=41 Identities=24% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
.+.+++|+|++|++|.+.++.+... |++|+++.++++..+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~~ 45 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEKL 45 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHH
Confidence 5789999999999999999988874 9999999887654333
No 320
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.36 E-value=0.13 Score=45.51 Aligned_cols=104 Identities=25% Similarity=0.288 Sum_probs=70.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----- 224 (284)
.|++|.|+| .|.+|...++.++. +|.+|++.+++.+.. .....+.. . .++.+.....|+|+-+...
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~-~G~~V~~~d~~~~~~-~~~~~~~~----~--~~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKG-FGMRILYYSRTRKPE-AEKELGAE----Y--RPLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCChh-hHHHcCCE----e--cCHHHHHhhCCEEEEeCCCChHHh
Confidence 578999999 89999999999998 599999998865433 23333321 1 1233445678999887652
Q ss_pred ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273 225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (284)
Q Consensus 225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 274 (284)
....+..|+++..++.++-.. --+-+.+++.+++|+|.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg~------------~vd~~aL~~aL~~g~i~ 260 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARGK------------VVDTKALVKALKEGWIA 260 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCch------------hcCHHHHHHHHHcCCeE
Confidence 156788888888888765211 11234556666777764
No 321
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.35 E-value=0.11 Score=45.34 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=57.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--- 225 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--- 225 (284)
..+|.|+| .|.+|.+.+..++.. | .+|++.++++++.+.+++.|....... +..+..+..|+||.|+...
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~---~~~~~~~~aDvViiavp~~~~~ 80 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVTT---SAAEAVKGADLVILCVPVGASG 80 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceecC---CHHHHhcCCCEEEECCCHHHHH
Confidence 36799999 899999988888774 6 378999999988888887774211111 1122235688888888641
Q ss_pred ---HHHHHhhccCCEEEEEcC
Q 023273 226 ---DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 226 ---~~~~~~l~~~G~~v~~g~ 243 (284)
......++++..++.++.
T Consensus 81 ~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 81 AVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHhhCCCCCEEEeCcc
Confidence 223334555555555543
No 322
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.32 E-value=0.22 Score=43.70 Aligned_cols=90 Identities=17% Similarity=0.248 Sum_probs=65.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc-
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC- 225 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~- 225 (284)
..-.|++|.|+| .|.+|.+.++.++. .|.+|++..+.....+.++..|.. +. +..+..+..|+|+-+..+.
T Consensus 12 ~~LkgKtVGIIG-~GsIG~amA~nL~d-~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~ 83 (335)
T PRK13403 12 ELLQGKTVAVIG-YGSQGHAQAQNLRD-SGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQ 83 (335)
T ss_pred hhhCcCEEEEEe-EcHHHHHHHHHHHH-CcCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChH
Confidence 345789999999 99999999999999 499999887765555566666653 11 2344456789998877531
Q ss_pred ------HHHHHhhccCCEEEEEcCC
Q 023273 226 ------DKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 226 ------~~~~~~l~~~G~~v~~g~~ 244 (284)
...+..|+++..+++..+.
T Consensus 84 t~~V~~~eil~~MK~GaiL~f~hgf 108 (335)
T PRK13403 84 QAHVYKAEVEENLREGQMLLFSHGF 108 (335)
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCc
Confidence 4577788888877766544
No 323
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.31 E-value=0.099 Score=44.14 Aligned_cols=73 Identities=22% Similarity=0.377 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh--HHHHHHcCCcE-Ee--eCCC-ccccc-------CCCccc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADL-AI--DYTK-ENIED-------LPEKFD 216 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~--~~~~~~~g~~~-~~--~~~~-~~~~~-------~~~~~d 216 (284)
.+++++|+|+++++|.+.++.+... |++|+++.+++.. .+.+++.+... .+ |-.+ +.... ..+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999888774 9999888765321 22333444321 22 2211 11111 134699
Q ss_pred EEEeCCC
Q 023273 217 VVFDAVG 223 (284)
Q Consensus 217 ~vid~~g 223 (284)
++++++|
T Consensus 86 ~lv~~ag 92 (251)
T PRK12481 86 ILINNAG 92 (251)
T ss_pred EEEECCC
Confidence 9999887
No 324
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.097 Score=43.90 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...++..... |++++++.++.++....
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~ 45 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERV 45 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHH
Confidence 4679999999999999988877774 89999999887665443
No 325
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.072 Score=44.97 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=34.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+++++|+|++|.+|...+..+... |++++++++++++.+.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~ 42 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAF 42 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 468999999999999988887774 89999999987776544
No 326
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.30 E-value=0.065 Score=49.84 Aligned_cols=74 Identities=24% Similarity=0.505 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh---------------------hhHHHHHHcCCcEEeeCCCc-
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTKE- 206 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~- 206 (284)
..+++|+|+| +|+.|+.++..++.. |.+|++++..+ ...+.++++|.+..++..-.
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 216 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR 216 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence 3678999999 899999999999985 99998887654 23466677886655443211
Q ss_pred --ccccCCCcccEEEeCCCC
Q 023273 207 --NIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 207 --~~~~~~~~~d~vid~~g~ 224 (284)
.......++|.+|.++|.
T Consensus 217 ~~~~~~~~~~~D~vilAtGa 236 (467)
T TIGR01318 217 DISLDDLLEDYDAVFLGVGT 236 (467)
T ss_pred ccCHHHHHhcCCEEEEEeCC
Confidence 111223479999999985
No 327
>PRK06484 short chain dehydrogenase; Validated
Probab=95.30 E-value=0.073 Score=50.05 Aligned_cols=73 Identities=22% Similarity=0.381 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcE-Ee--eCCC-cccccC-------CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AI--DYTK-ENIEDL-------PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~--~~~~-~~~~~~-------~~~~d~ 217 (284)
.++++||+|+++++|++.++..... |++|+++.+++++.+.+.+ .+... .+ |-.+ +..... .+.+|+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999999999999988887774 8999999998887766643 44321 12 2221 111111 246999
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|+++|
T Consensus 347 li~nAg 352 (520)
T PRK06484 347 LVNNAG 352 (520)
T ss_pred EEECCC
Confidence 999876
No 328
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.28 E-value=0.086 Score=42.97 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=59.3
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCcccccCCCcccEE
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDVV 218 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d~v 218 (284)
..+..++.+||-+| + +.|..+..+++. +.+|++++.+++-.+.+++ .+.. .....+-..+ ...+.+|+|
T Consensus 25 ~l~~~~~~~vLDiG-c-G~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I 99 (197)
T PRK11207 25 AVKVVKPGKTLDLG-C-GNGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFI 99 (197)
T ss_pred hcccCCCCcEEEEC-C-CCCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEE
Confidence 34556778999998 3 447788888875 7899999999887666543 2221 1111111111 124569999
Q ss_pred EeCCC----C-------cHHHHHhhccCCEEEEEc
Q 023273 219 FDAVG----Q-------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 219 id~~g----~-------~~~~~~~l~~~G~~v~~g 242 (284)
+.+.. . ...+.+.|+++|+++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 87633 1 257788899999965543
No 329
>PLN02928 oxidoreductase family protein
Probab=95.28 E-value=0.12 Score=46.10 Aligned_cols=91 Identities=25% Similarity=0.340 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----C-cEEee--CCCcccccCCCcccEEEeC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----A-DLAID--YTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~-~~~~~--~~~~~~~~~~~~~d~vid~ 221 (284)
-.|.++.|+| .|.+|..+++.++. +|++|++.+++..+... ..++ . ....+ ....++.+.-...|+|+.+
T Consensus 157 l~gktvGIiG-~G~IG~~vA~~l~a-fG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILG-YGAIGIELAKRLRP-FGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 3578999999 89999999999999 49999999876332111 1110 0 00000 0112344445678999988
Q ss_pred CCC--------cHHHHHhhccCCEEEEEc
Q 023273 222 VGQ--------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 222 ~g~--------~~~~~~~l~~~G~~v~~g 242 (284)
... -...+..|+++..+|-++
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 652 168899999999888776
No 330
>PRK06398 aldose dehydrogenase; Validated
Probab=95.25 E-value=0.065 Score=45.45 Aligned_cols=38 Identities=24% Similarity=0.409 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++++|+|+++++|.+.+...... |++|+++.+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~ 42 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS 42 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence 4789999999999999999888874 9999999887554
No 331
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.23 E-value=0.21 Score=39.18 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCccccc-CCCcccEEEeCCCCc--
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFDAVGQC-- 225 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~d~vid~~g~~-- 225 (284)
-.|.+|+|+| +|.+|..-++.... .|++|.++. ++..+.+++++... +.. ..+.+ --.++|+|+-++++.
T Consensus 11 l~~~~vlVvG-GG~va~rka~~Ll~-~ga~V~VIs--p~~~~~l~~l~~i~-~~~--~~~~~~dl~~a~lViaaT~d~e~ 83 (157)
T PRK06719 11 LHNKVVVIIG-GGKIAYRKASGLKD-TGAFVTVVS--PEICKEMKELPYIT-WKQ--KTFSNDDIKDAHLIYAATNQHAV 83 (157)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEc--CccCHHHHhccCcE-EEe--cccChhcCCCceEEEECCCCHHH
Confidence 3678999999 79999988887777 488888774 44444455554211 111 11111 136799999999863
Q ss_pred HHHHHhhccCCEEE
Q 023273 226 DKALKAVKEGGRVV 239 (284)
Q Consensus 226 ~~~~~~l~~~G~~v 239 (284)
+..+...++.+.++
T Consensus 84 N~~i~~~a~~~~~v 97 (157)
T PRK06719 84 NMMVKQAAHDFQWV 97 (157)
T ss_pred HHHHHHHHHHCCcE
Confidence 44444444333333
No 332
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.22 E-value=0.066 Score=45.97 Aligned_cols=44 Identities=34% Similarity=0.491 Sum_probs=37.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
-.|+.++|+|++.++|.+.+...... |++|+++.+++++.+..+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~~ 49 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEETA 49 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 46889999999999999887777774 999999999988876553
No 333
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.11 Score=43.50 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=33.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
++++|+|++|++|...++..... |++|+++++++++.+..
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERL 41 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence 57999999999999998888874 99999999988766443
No 334
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.1 Score=43.06 Aligned_cols=71 Identities=27% Similarity=0.476 Sum_probs=48.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE-EeeCCC-ccccc----C-CCcccEEEeCCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTK-ENIED----L-PEKFDVVFDAVG 223 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~----~-~~~~d~vid~~g 223 (284)
++++|+|++|.+|...++.... .|++++++++++++.+.++..+... ..|-.+ +.+.. . ...+|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~-~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRA-DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHh-CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence 4789999999999998887776 4999999999888777666554321 122211 11111 1 236899998876
No 335
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=95.20 E-value=0.29 Score=40.17 Aligned_cols=98 Identities=23% Similarity=0.278 Sum_probs=63.3
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC--CeEEEEeCChhhHHHHHHcCC----cEEeeCCCcccccCCCcccE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g--~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~d~ 217 (284)
......++.+|+-+| +|. |..+..+++.. + .++++++.+++..+.+++... ..++..+........+.+|+
T Consensus 33 ~~~~~~~~~~vldiG-~G~-G~~~~~~~~~~-~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 109 (223)
T TIGR01934 33 KLIGVFKGQKVLDVA-CGT-GDLAIELAKSA-PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDA 109 (223)
T ss_pred HHhccCCCCeEEEeC-CCC-ChhHHHHHHhc-CCCceEEEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEE
Confidence 344455889999998 444 77777888774 5 589999999888777765321 12222111111112356999
Q ss_pred EEeCCC-----C----cHHHHHhhccCCEEEEEcCC
Q 023273 218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 218 vid~~g-----~----~~~~~~~l~~~G~~v~~g~~ 244 (284)
++...+ . .+.+.+.|+++|++++++..
T Consensus 110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 145 (223)
T TIGR01934 110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFS 145 (223)
T ss_pred EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEec
Confidence 876433 1 26788899999999987643
No 336
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.19 E-value=0.4 Score=39.35 Aligned_cols=89 Identities=22% Similarity=0.282 Sum_probs=57.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc---
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--- 225 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~--- 225 (284)
.|.+|+|+| .|.+|...++.+.. .|++|++++.... .+..+.+.+.-..+..+. . .....++++||-++++.
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~-~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~-~-~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLK-AGAQLRVIAEELESELTLLAEQGGITWLARCF-D-ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHH-CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCC-C-HHHhCCcEEEEECCCCHHHH
Confidence 477999999 89999998888888 4999998876433 333333444222222211 1 11236899999999974
Q ss_pred HHHHHhhccCCEEEEEc
Q 023273 226 DKALKAVKEGGRVVSII 242 (284)
Q Consensus 226 ~~~~~~l~~~G~~v~~g 242 (284)
.......+..|.+|.+.
T Consensus 84 ~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 84 RRVAHAARARGVPVNVV 100 (205)
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 34455555667776554
No 337
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.19 E-value=0.32 Score=39.44 Aligned_cols=97 Identities=18% Similarity=0.278 Sum_probs=60.2
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCc-ccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKE-NIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~-~~~~~~~~~d 216 (284)
...++.++++|+-+|+ +.|..++.+++...+.+++.++.+++..+.+++ ++.. .++..+.. .+......+|
T Consensus 34 ~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d 111 (196)
T PRK07402 34 SQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD 111 (196)
T ss_pred HhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence 4567788999999884 445566666665346799999999988777653 4432 22322211 1222222345
Q ss_pred EE-EeCCCC----cHHHHHhhccCCEEEEEc
Q 023273 217 VV-FDAVGQ----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~v-id~~g~----~~~~~~~l~~~G~~v~~g 242 (284)
.+ ++.... ++.+.+.|+++|+++...
T Consensus 112 ~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 112 RVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred EEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 44 443222 378888999999998764
No 338
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.19 E-value=0.13 Score=43.16 Aligned_cols=42 Identities=29% Similarity=0.320 Sum_probs=35.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|.+|...++..... |.+++++++++++.+..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~ 44 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAA 44 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 4679999999999999999988874 99999999987765444
No 339
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.19 E-value=0.18 Score=40.59 Aligned_cols=92 Identities=26% Similarity=0.305 Sum_probs=53.5
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEe--eCCCcc-c----ccC-CCccc
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKEN-I----EDL-PEKFD 216 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~----~~~-~~~~d 216 (284)
...++++++||.+| +|+-+++.....+.....++++++.++++ +..+.. .+ +..+.. . ... .+++|
T Consensus 27 ~~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCcc
Confidence 35678999999999 55555443333332124579999998764 111222 22 221111 0 011 34799
Q ss_pred EEEeC-----CCC---------------cHHHHHhhccCCEEEEEc
Q 023273 217 VVFDA-----VGQ---------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid~-----~g~---------------~~~~~~~l~~~G~~v~~g 242 (284)
+|+.. .|. ...+.++|+++|+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 99952 221 145788999999999754
No 340
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.18 E-value=0.08 Score=39.48 Aligned_cols=89 Identities=25% Similarity=0.327 Sum_probs=52.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHHHHc-C----C-cEEeeCCCcccccCCCcccEEEeCCCC-
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSL-G----A-DLAIDYTKENIEDLPEKFDVVFDAVGQ- 224 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~~~~-g----~-~~~~~~~~~~~~~~~~~~d~vid~~g~- 224 (284)
+|.|+|++|-+|...+++......+.++.+..+++ .-..+... . . +..+.. .+... ..++|++|.|.++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~Dvvf~a~~~~ 77 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEE-LSDVDVVFLALPHG 77 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHH-HTTESEEEE-SCHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhH-hhcCCEEEecCchh
Confidence 58899999999999999988765677666555444 22222221 1 1 111211 11222 2789999999985
Q ss_pred -cHHHHH-hhccCCEEEEEcCC
Q 023273 225 -CDKALK-AVKEGGRVVSIIGS 244 (284)
Q Consensus 225 -~~~~~~-~l~~~G~~v~~g~~ 244 (284)
...... .+.++-+++..+..
T Consensus 78 ~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 78 ASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHTTSEEEESSST
T ss_pred HHHHHHHHHhhCCcEEEeCCHH
Confidence 244444 45556667766543
No 341
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.11 Score=43.84 Aligned_cols=74 Identities=27% Similarity=0.406 Sum_probs=48.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCChhhHHH----HHHcCCcE-E--eeCCCc-ccccC-------C
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDL----LRSLGADL-A--IDYTKE-NIEDL-------P 212 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~~~~~~----~~~~g~~~-~--~~~~~~-~~~~~-------~ 212 (284)
..+++++|+|++|++|...++.+... |++ |+++.+++++... ++..+... . .|..+. .+.+. .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999888874 888 8888887665542 22333321 1 222211 11111 2
Q ss_pred CcccEEEeCCC
Q 023273 213 EKFDVVFDAVG 223 (284)
Q Consensus 213 ~~~d~vid~~g 223 (284)
+++|++|++.|
T Consensus 83 g~id~li~~ag 93 (260)
T PRK06198 83 GRLDALVNAAG 93 (260)
T ss_pred CCCCEEEECCC
Confidence 46999999987
No 342
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.16 E-value=0.12 Score=43.60 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCc-EEeeCCCc---cccc-------CCCccc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGAD-LAIDYTKE---NIED-------LPEKFD 216 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~-~~~~~~~~---~~~~-------~~~~~d 216 (284)
.+.+++|+|++|++|.+.++..... |++|+.+++++. ..+.+++.+.. ..+..+-. .... ..+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999988774 999988765432 22333444422 12221111 1111 124799
Q ss_pred EEEeCCC
Q 023273 217 VVFDAVG 223 (284)
Q Consensus 217 ~vid~~g 223 (284)
++|+++|
T Consensus 88 ~li~~Ag 94 (253)
T PRK08993 88 ILVNNAG 94 (253)
T ss_pred EEEECCC
Confidence 9999887
No 343
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.15 E-value=0.14 Score=45.14 Aligned_cols=84 Identities=24% Similarity=0.362 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---- 224 (284)
.|+++-|+| .|.+|.+.++.++. +|++|+..++++. .+..++.+..++ + +.+..+..|++.-+.. +
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~-~-----l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYV-D-----LDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceec-c-----HHHHHHhCCEEEEeCCCChHHh
Confidence 489999999 99999999999997 7999999998765 333334433321 1 3444567888765544 2
Q ss_pred ---cHHHHHhhccCCEEEEEc
Q 023273 225 ---CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 ---~~~~~~~l~~~G~~v~~g 242 (284)
-...+..|++++.+|-++
T Consensus 216 hLin~~~l~~mk~ga~lVNta 236 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTA 236 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECC
Confidence 168899999999998776
No 344
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=95.15 E-value=0.026 Score=48.54 Aligned_cols=66 Identities=23% Similarity=0.218 Sum_probs=44.6
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
|||+|++|.+|...++.+... |.+|+++++++++.......+ +.+...........++|+||.+++
T Consensus 1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence 689999999999999888874 899999999776643322111 111111122223467999999886
No 345
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.14 E-value=0.13 Score=43.31 Aligned_cols=73 Identities=23% Similarity=0.343 Sum_probs=46.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC-hhhHHHHHHcCCcEE-eeCCC-ccccc-------CCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRSLGADLA-IDYTK-ENIED-------LPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~-~~~~~~~~~~g~~~~-~~~~~-~~~~~-------~~~~~d~vi 219 (284)
.+++++|+|++|++|.+.++..... |++|+++.+. ++..+.+++.+...+ .|-.+ +.... ..+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999998888774 8998877654 334444444332111 12211 11111 124689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.++|
T Consensus 85 ~~ag 88 (255)
T PRK06463 85 NNAG 88 (255)
T ss_pred ECCC
Confidence 9886
No 346
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.11 Score=45.39 Aligned_cols=35 Identities=29% Similarity=0.327 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
.+++++|+|+++++|+++++..... |++|+++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence 5789999999999999999888874 9999998876
No 347
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.13 E-value=0.23 Score=42.68 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=49.1
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEE
Q 023273 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVF 219 (284)
Q Consensus 142 al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vi 219 (284)
+++..+...+++++|+| +|+.+++++..++.+ |+ ++.++.++++|.+.+.+ ++.. .. ... . ...+|++|
T Consensus 113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~----~~-~~~-~-~~~~dlvI 183 (272)
T PRK12550 113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYE----WR-PDL-G-GIEADILV 183 (272)
T ss_pred HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCc----ch-hhc-c-cccCCEEE
Confidence 44433444567999999 799999988888875 65 69999999888776643 3311 11 011 1 24589999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9974
No 348
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.11 E-value=0.15 Score=42.90 Aligned_cols=41 Identities=29% Similarity=0.413 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
++++++|+|++|.+|...+...... |++++++.+++++.+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~ 50 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEA 50 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHH
Confidence 5889999999999999988877774 9999999998776544
No 349
>PRK07985 oxidoreductase; Provisional
Probab=95.10 E-value=0.23 Score=43.07 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
..+++++|+|+++++|.+.++.+... |++|+++.++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~-G~~Vi~~~~~ 82 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE-GADVAISYLP 82 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEecCC
Confidence 36679999999999999988888874 9999887653
No 350
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.10 E-value=0.23 Score=42.58 Aligned_cols=90 Identities=19% Similarity=0.279 Sum_probs=58.4
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc---CCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
...+++++|+| +|++|.+++..+... |++++++.+++++.+.+. .+ +......... .....+|++|+|++
T Consensus 114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp 187 (270)
T TIGR00507 114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS 187 (270)
T ss_pred CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence 34578999999 589999988887774 889999999887765443 32 2212221111 11246999999987
Q ss_pred Cc--------HHHHHhhccCCEEEEEcC
Q 023273 224 QC--------DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 224 ~~--------~~~~~~l~~~G~~v~~g~ 243 (284)
.. ......++++..++.+..
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 31 112456777777776654
No 351
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.10 E-value=0.13 Score=43.36 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|+++++|...+...... |++++++.+++++.+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~-G~~vv~~~r~~~~~~~~ 51 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHV 51 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 4789999999999999998887774 99999998877765443
No 352
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.16 Score=43.89 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
..+++++|+|+++++|.+.++..... |+++++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence 46789999999999999988877774 89999887654
No 353
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.09 E-value=0.13 Score=43.44 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
..+.++||+|+++++|.+.++..... |++++++.++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~ 48 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG 48 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 35789999999999999999888874 9999999887
No 354
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.07 E-value=0.12 Score=45.25 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=34.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~ 192 (284)
+.+++|+|+++++|.+.++..... | .+|+++.+++++.+.+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~-G~~~V~l~~r~~~~~~~~ 44 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT-GEWHVIMACRDFLKAEQA 44 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHH
Confidence 568999999999999988777764 8 8999999887776544
No 355
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.06 E-value=0.13 Score=43.79 Aligned_cols=37 Identities=27% Similarity=0.276 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCc--hHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 149 ~~g~~vlI~ga~g--~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
..+++++|+|+++ ++|.+.++..... |++|++..+++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~ 42 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 42 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence 3578999999875 8999988777764 89998887763
No 356
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.05 E-value=0.15 Score=42.39 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
++++++|+|++|.+|...++..... |.+|+++.+++++.+..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~ 45 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEAL 45 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHH
Confidence 4578999999999999999888874 99999999987775443
No 357
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=95.04 E-value=0.29 Score=42.99 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=58.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc-C---CcEEeeCCCcccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL-G---ADLAIDYTKENIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~-g---~~~~~~~~~~~~~~~~~~~d 216 (284)
......+|++|+-+| ||. |..+..++.. +...++.++.++.-...+ +.. + ...+....-+++.. ...||
T Consensus 115 ~~l~~~~g~~VLDvG-CG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp~-~~~FD 190 (314)
T TIGR00452 115 PHLSPLKGRTILDVG-CGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLHE-LYAFD 190 (314)
T ss_pred HhcCCCCCCEEEEec-cCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCCC-CCCcC
Confidence 345667889999999 444 7777777765 345788999887654432 222 2 11222222222222 24699
Q ss_pred EEEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273 217 VVFDAVG-----Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 217 ~vid~~g-----~----~~~~~~~l~~~G~~v~~ 241 (284)
+|+...- + +..+.++|+++|++++.
T Consensus 191 ~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 191 TVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred EEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 9986531 2 36788999999999964
No 358
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.00 E-value=0.35 Score=40.48 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~ 184 (284)
.+.++||+|++|.+|...++..... |+++++..+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~ 38 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK 38 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence 3679999999999999988877764 888877664
No 359
>PRK06484 short chain dehydrogenase; Validated
Probab=95.00 E-value=0.11 Score=48.83 Aligned_cols=73 Identities=30% Similarity=0.473 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-E--eeCCC-ccccc----C---CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTK-ENIED----L---PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~--~~~~~-~~~~~----~---~~~~d~ 217 (284)
.+++++|+|+++++|.+.++.+... |++|+++.++.++.+.+ ++++... . .|-.+ +.+.. . .+.+|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999999999999999988874 99999999988876554 4454321 1 22221 11111 1 246999
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|+++|
T Consensus 83 li~nag 88 (520)
T PRK06484 83 LVNNAG 88 (520)
T ss_pred EEECCC
Confidence 999876
No 360
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.98 E-value=0.15 Score=43.31 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|+++++|...+...... |++++++.+++++.+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~-G~~vv~~~~~~~~~~~~ 50 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA-GATIVFNDINQELVDKG 50 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence 5689999999999999988877774 99999998887765443
No 361
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=94.98 E-value=0.61 Score=42.35 Aligned_cols=95 Identities=23% Similarity=0.311 Sum_probs=63.5
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHH-HHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDL-LRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
.+--.+.+++++| +|-+|..++...... | .+++++.+..+|... +++++.. ++..+ ...+....+|+||.+++
T Consensus 173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~-~~~l~--el~~~l~~~DvVissTs 247 (414)
T COG0373 173 FGSLKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAE-AVALE--ELLEALAEADVVISSTS 247 (414)
T ss_pred hcccccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCe-eecHH--HHHHhhhhCCEEEEecC
Confidence 3334788999999 899998888887774 6 678888888887654 4678843 22221 22333567999999998
Q ss_pred Cc------HHHHHhhccCCE--EEEEcCCC
Q 023273 224 QC------DKALKAVKEGGR--VVSIIGSV 245 (284)
Q Consensus 224 ~~------~~~~~~l~~~G~--~v~~g~~~ 245 (284)
++ ....+.++..-+ ++.++.|.
T Consensus 248 a~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 248 APHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred CCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 63 455556665544 44556664
No 362
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.98 E-value=0.25 Score=38.87 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=44.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~ 224 (284)
.+|-++| .|.+|...+.-+... |.++++.++++++.+.+.+.|.... ++ ..+..+..|+||-|..+
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~~-~s----~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEVA-DS----PAEAAEQADVVILCVPD 67 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEEE-SS----HHHHHHHBSEEEE-SSS
T ss_pred CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhhh-hh----hhhHhhcccceEeeccc
Confidence 3688999 899999988887774 9999999999999988887774321 11 11112345666666553
No 363
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.98 E-value=0.46 Score=39.65 Aligned_cols=98 Identities=15% Similarity=0.225 Sum_probs=60.7
Q ss_pred HHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCC---eEEEEeCC----hhh--------HHHHHHcCCcEEeeCC
Q 023273 141 EGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSS----TAK--------LDLLRSLGADLAIDYT 204 (284)
Q Consensus 141 ~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~---~vi~~~~~----~~~--------~~~~~~~g~~~~~~~~ 204 (284)
.+++..+ --.+.+++|+| +|+.|.+++..+... |. ++++++++ .++ .++++.++... .+
T Consensus 14 ~al~~~g~~l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence 3444433 24567999999 799999998888775 75 58888887 444 22334443211 11
Q ss_pred CcccccCCCcccEEEeCCCC---cHHHHHhhccCCEEEEEcCC
Q 023273 205 KENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 205 ~~~~~~~~~~~d~vid~~g~---~~~~~~~l~~~G~~v~~g~~ 244 (284)
..+.+.-+++|++|++++. ....++.|.++..+..+..|
T Consensus 89 -~~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 89 -GTLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred -CCHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence 1222223468999999862 25667777777666655544
No 364
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.96 E-value=0.16 Score=42.34 Aligned_cols=73 Identities=25% Similarity=0.417 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCc-EEeeCC--C-ccccc-------CCCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYT--K-ENIED-------LPEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~--~-~~~~~-------~~~~~d~ 217 (284)
++.+++|+|++|.+|...++..... |..|+...++.++.+... +.+.. ..+..+ + +.+.. ..+++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999999999999988888774 888888888777665543 33321 122211 1 11111 1246899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
+|.++|
T Consensus 84 vi~~ag 89 (245)
T PRK12936 84 LVNNAG 89 (245)
T ss_pred EEECCC
Confidence 999987
No 365
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.96 E-value=0.55 Score=41.41 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=57.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHhc---CCeEEEEeC--ChhhHHHHHHcCCc--------------EEeeC---------C
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVF---GASKVAATS--STAKLDLLRSLGAD--------------LAIDY---------T 204 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~---g~~vi~~~~--~~~~~~~~~~~g~~--------------~~~~~---------~ 204 (284)
+|.|.| .|.+|+..++.+.... ...++.+.. +++-+.++-++... .+++. +
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 478999 5999999999877631 255555433 33334444332210 01110 1
Q ss_pred CcccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCC
Q 023273 205 KENIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVT 246 (284)
Q Consensus 205 ~~~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~ 246 (284)
...++....++|+||+|+|.+ +.+...+..|++.|.++.+..
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~~ 124 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPGA 124 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCCc
Confidence 111222235899999999963 677889999999999998743
No 366
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.94 E-value=0.27 Score=39.54 Aligned_cols=90 Identities=26% Similarity=0.355 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc--EEeeCCCcccccCCCcccEEEeCC-
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKENIEDLPEKFDVVFDAV- 222 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~d~vid~~- 222 (284)
++++|+-+|+ +.|..++.+++...+.+++.++.+++..+.++ +.+.. .++..+...+. ..+.+|+|+...
T Consensus 42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~~-~~~~fD~I~s~~~ 118 (181)
T TIGR00138 42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAEDFQ-HEEQFDVITSRAL 118 (181)
T ss_pred CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhhcc-ccCCccEEEehhh
Confidence 4889999984 34556666665533578999999988665553 34432 22333222221 245799987653
Q ss_pred CC----cHHHHHhhccCCEEEEEc
Q 023273 223 GQ----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 223 g~----~~~~~~~l~~~G~~v~~g 242 (284)
.. .+.+.++|+++|+++..-
T Consensus 119 ~~~~~~~~~~~~~LkpgG~lvi~~ 142 (181)
T TIGR00138 119 ASLNVLLELTLNLLKVGGYFLAYK 142 (181)
T ss_pred hCHHHHHHHHHHhcCCCCEEEEEc
Confidence 23 266788999999999764
No 367
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.93 E-value=0.15 Score=43.23 Aligned_cols=89 Identities=19% Similarity=0.302 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CCc---EEeeCCCcccc-cCCCcccEEEe
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIE-DLPEKFDVVFD 220 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~-~~~~~~d~vid 220 (284)
.++.+||-+| ++.|..+..+++. +.++++++.+++.++.+++. +.. .++..+..++. ...+.+|+|+.
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~ 118 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILF 118 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEe
Confidence 5567899888 4667788888875 78999999999988877642 211 22322222222 12457999985
Q ss_pred CCC-----C----cHHHHHhhccCCEEEEE
Q 023273 221 AVG-----Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 221 ~~g-----~----~~~~~~~l~~~G~~v~~ 241 (284)
... + +..+.+.|+++|+++++
T Consensus 119 ~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 119 HAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred hhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 432 2 36788999999999876
No 368
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.93 E-value=0.066 Score=47.19 Aligned_cols=42 Identities=24% Similarity=0.245 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.|.+++|+||++++|.+.+...... |++|+++++++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence 5889999999999999988777664 99999999998887655
No 369
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.93 E-value=0.11 Score=47.12 Aligned_cols=88 Identities=27% Similarity=0.378 Sum_probs=57.2
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH--cCCc---EEeeCCC-cccccCCCcccEEEeCCCCc-
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS--LGAD---LAIDYTK-ENIEDLPEKFDVVFDAVGQC- 225 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~--~g~~---~~~~~~~-~~~~~~~~~~d~vid~~g~~- 225 (284)
|+|+|+ |.+|..+++.+...... ++++.+++.++.+.+.+ .+.. ..+|..+ +.+.+.-++.|+||+|+|.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789997 99999999998875334 89999999999877754 2211 1233322 12344456789999999853
Q ss_pred --HHHHHhhccCCEEEEEc
Q 023273 226 --DKALKAVKEGGRVVSII 242 (284)
Q Consensus 226 --~~~~~~l~~~G~~v~~g 242 (284)
..+..|+..+-.++..+
T Consensus 80 ~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS
T ss_pred hHHHHHHHHHhCCCeeccc
Confidence 55666777788887743
No 370
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.91 E-value=0.09 Score=44.42 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-cEEe--eCCC--cccccCC-CcccEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAI--DYTK--ENIEDLP-EKFDVVFDAV 222 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~--~~~~--~~~~~~~-~~~d~vid~~ 222 (284)
..+.+|+|+|++|.+|...+..+.. .|.+|+++.+++++.......+. ..++ |..+ ..+.+.. .++|++|.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLA-KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 3467999999999999999988877 48999999988776543322111 1122 3222 1222222 5799999887
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
|
T Consensus 94 g 94 (251)
T PLN00141 94 G 94 (251)
T ss_pred C
Confidence 6
No 371
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.88 E-value=0.16 Score=42.37 Aligned_cols=40 Identities=23% Similarity=0.314 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD 190 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~ 190 (284)
.+.+++|+|++|.+|...+...... |.+|++++++.++..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~ 44 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAA 44 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHH
Confidence 4678999999999999988888774 899999999866543
No 372
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.87 E-value=0.13 Score=44.58 Aligned_cols=90 Identities=20% Similarity=0.216 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHH-HcC----CcEEeeCCCcccccCCCcccEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG----ADLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
..+.+++|+| +|+.|.+++..+... |+ +++++.++.+|.+.+. ++. ...+...+ ........+|+||+|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~--~~~~~~~~aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAGS--DLAAALAAADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc--chHhhhCCCCEEEECC
Confidence 3568999999 899999998888875 65 7889999888876653 332 11222211 1122235799999996
Q ss_pred CC-----c--HHHHHhhccCCEEEEEc
Q 023273 223 GQ-----C--DKALKAVKEGGRVVSII 242 (284)
Q Consensus 223 g~-----~--~~~~~~l~~~G~~v~~g 242 (284)
.. . ....+.+++...++.+-
T Consensus 201 p~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 201 PTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred cCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 31 1 11234566655554443
No 373
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.87 E-value=0.11 Score=44.82 Aligned_cols=73 Identities=29% Similarity=0.452 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCchHHHH-HHHHHHHhcCCeEEEEeCChhhHHHHH-H----cCC---cEEeeCCCcc--cccC---CCc
Q 023273 149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR-S----LGA---DLAIDYTKEN--IEDL---PEK 214 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~-a~~~a~~~~g~~vi~~~~~~~~~~~~~-~----~g~---~~~~~~~~~~--~~~~---~~~ 214 (284)
+-|++.+|+||+.++|.+ |-++|+. |.+++.+.|+.+|++..+ + .+. ..++|...++ ++++ ..+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 457899999999999987 5566663 999999999999997773 2 221 1235554444 3332 233
Q ss_pred --ccEEEeCCC
Q 023273 215 --FDVVFDAVG 223 (284)
Q Consensus 215 --~d~vid~~g 223 (284)
+-+.+|++|
T Consensus 125 ~~VgILVNNvG 135 (312)
T KOG1014|consen 125 LDVGILVNNVG 135 (312)
T ss_pred CceEEEEeccc
Confidence 446788887
No 374
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.17 Score=43.10 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=32.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
++++|+|++|++|...+..... .|.+|++++++.++.+.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~-~g~~V~~~~r~~~~~~~ 39 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAR-EGWRLALADVNEEGGEE 39 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHH
Confidence 3789999999999998888777 49999999988776543
No 375
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.18 Score=43.18 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~ 191 (284)
+..+++|+|++|.+|...++.+... |++|+++.++.++.+.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~ 49 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEE 49 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence 4568999999999999999888774 8999988887765543
No 376
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.81 E-value=0.095 Score=50.91 Aligned_cols=74 Identities=20% Similarity=0.438 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---------------------hHHHHHHcCCcEEeeCCC--
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK-- 205 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~-- 205 (284)
..+++|+|+| +|+.|++++..++.. |.+|++++..+. +.+.++++|.+...+..-
T Consensus 325 ~~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~ 402 (654)
T PRK12769 325 KSDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGK 402 (654)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCC
Confidence 3588999999 899999999999985 999999987543 244556667543333211
Q ss_pred -cccccCCCcccEEEeCCCC
Q 023273 206 -ENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 206 -~~~~~~~~~~d~vid~~g~ 224 (284)
..+.....++|.+|.++|.
T Consensus 403 ~i~~~~~~~~~DavilAtGa 422 (654)
T PRK12769 403 DISLESLLEDYDAVFVGVGT 422 (654)
T ss_pred cCCHHHHHhcCCEEEEeCCC
Confidence 1112223579999998884
No 377
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.79 E-value=0.12 Score=44.73 Aligned_cols=73 Identities=26% Similarity=0.335 Sum_probs=46.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCC-eEEEEeCChhhHHHHHH-c----CCcEEeeCCCcccccCCCcccEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-L----GADLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~-~vi~~~~~~~~~~~~~~-~----g~~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
..+++++|+| +|+.+.+++..+... |+ +++++.++.+|.+.+.+ + +...+...+..........+|+++|++
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence 3478999999 799999888777765 64 78888898888766642 2 111111111011111234689999997
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
.
T Consensus 203 p 203 (283)
T PRK14027 203 P 203 (283)
T ss_pred C
Confidence 5
No 378
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.79 E-value=0.22 Score=39.57 Aligned_cols=95 Identities=25% Similarity=0.274 Sum_probs=58.1
Q ss_pred hcccchHHHHHHHHH-hcccCCCCEEEEEcCCch-HHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcc
Q 023273 130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGG-VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN 207 (284)
Q Consensus 130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~ga~g~-~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (284)
...|+....+...++ ...--.+.+++|+| +|. +|..++..++.. |++++++.+..+.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~~l------------------ 81 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTKNL------------------ 81 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCchhH------------------
Confidence 334544434444443 23346889999999 565 599888888874 88888777653211
Q ss_pred cccCCCcccEEEeCCCCcHH-HHHhhccCCEEEEEcCCC
Q 023273 208 IEDLPEKFDVVFDAVGQCDK-ALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 208 ~~~~~~~~d~vid~~g~~~~-~~~~l~~~G~~v~~g~~~ 245 (284)
.+.-..+|+||.+++.++. -.+.++++-.++.++.+.
T Consensus 82 -~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr 119 (168)
T cd01080 82 -KEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred -HHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence 1223568899999886431 112455555566666554
No 379
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.79 E-value=0.27 Score=42.46 Aligned_cols=95 Identities=24% Similarity=0.265 Sum_probs=65.1
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
..||+.......++..+ --.|.+++|+|.+..+|.-++.++... +++|+++.+.... +.
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t~~-------------------l~ 196 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRSKD-------------------MA 196 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchh-------------------HH
Confidence 45665555555555444 357999999996666999999999984 8999988764321 22
Q ss_pred cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (284)
+..+..|++|.++|.++ -.-+.++++..++.+|.+.
T Consensus 197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence 22467899999998641 1124678888788787654
No 380
>PLN02427 UDP-apiose/xylose synthase
Probab=94.77 E-value=0.13 Score=46.36 Aligned_cols=78 Identities=13% Similarity=0.076 Sum_probs=50.2
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC------cEEeeCC---CcccccCCCccc
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA------DLAIDYT---KENIEDLPEKFD 216 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~d 216 (284)
++..+..+|+|+||+|-+|...++.+...++.+|++++++.++...+...+. ..++.-+ ...+.+.-+++|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 4445567899999999999988888776335889999887666554433221 1122111 112233345799
Q ss_pred EEEeCCC
Q 023273 217 VVFDAVG 223 (284)
Q Consensus 217 ~vid~~g 223 (284)
+||.+++
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9999876
No 381
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=94.76 E-value=0.18 Score=44.49 Aligned_cols=91 Identities=21% Similarity=0.238 Sum_probs=58.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcC----C---cEEeeCCCcccccCCCcccEEEe
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----A---DLAIDYTKENIEDLPEKFDVVFD 220 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g----~---~~~~~~~~~~~~~~~~~~d~vid 220 (284)
..++.+||-+|+ +.|..+..+++. +++|+.++.+++..+.++... . ..++..+.+++....+.||+|+.
T Consensus 129 ~~~g~~ILDIGC--G~G~~s~~La~~--g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~ 204 (322)
T PLN02396 129 PFEGLKFIDIGC--GGGLLSEPLARM--GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS 204 (322)
T ss_pred CCCCCEEEEeeC--CCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEE
Confidence 356789999984 334456666653 889999999999888886421 1 11222222222222457999985
Q ss_pred CC-----CC----cHHHHHhhccCCEEEEEc
Q 023273 221 AV-----GQ----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 221 ~~-----g~----~~~~~~~l~~~G~~v~~g 242 (284)
.. .+ .+.+.++|+++|.+++..
T Consensus 205 ~~vLeHv~d~~~~L~~l~r~LkPGG~liist 235 (322)
T PLN02396 205 LEVIEHVANPAEFCKSLSALTIPNGATVLST 235 (322)
T ss_pred hhHHHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 42 23 367888999999998764
No 382
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.76 E-value=0.5 Score=41.72 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=61.3
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-Hc----CCcEEeeCCCcccccCCCcccE
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SL----GADLAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~----g~~~~~~~~~~~~~~~~~~~d~ 217 (284)
+........++.|+| +|..|.+.+.......+ .++.++.+++++.+.+. ++ +.. +... .+..+.-...|+
T Consensus 120 ~~la~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~--~~~~~~~~~aDi 195 (325)
T PRK08618 120 KYLAREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV--NSADEAIEEADI 195 (325)
T ss_pred HHhcCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe--CCHHHHHhcCCE
Confidence 333345677899999 89999877655433235 46778888888765553 22 322 1111 122333467999
Q ss_pred EEeCCCC--cHHHHHhhccCCEEEEEcCC
Q 023273 218 VFDAVGQ--CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 218 vid~~g~--~~~~~~~l~~~G~~v~~g~~ 244 (284)
|+.|+++ +-.. ++++++-.++.+|.+
T Consensus 196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 196 IVTVTNAKTPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred EEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence 9999885 3344 888888888778764
No 383
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.73 E-value=0.19 Score=44.16 Aligned_cols=81 Identities=25% Similarity=0.357 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~---- 224 (284)
.|+++.|+| .|.+|...+++++. +|.+|++.++..... ..+. ...++.+.....|+|.-+.. +
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~-fgm~V~~~d~~~~~~----~~~~------~~~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQA-FGAKVVYYSTSGKNK----NEEY------ERVSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhh-cCCEEEEECCCcccc----ccCc------eeecHHHHhhcCCEEEEeCCCCchhh
Confidence 688999999 99999999999999 599999998753211 1111 11134444566888876654 1
Q ss_pred ---cHHHHHhhccCCEEEEEc
Q 023273 225 ---CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 ---~~~~~~~l~~~G~~v~~g 242 (284)
-...+..|+++..+|-++
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~a 232 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVG 232 (311)
T ss_pred cccCHHHHHhCCCCeEEEECC
Confidence 178899999999888775
No 384
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.13 Score=43.37 Aligned_cols=38 Identities=34% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++++|+|++|++|...++..... |++|+++.+++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~r~~~~ 45 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEA-GARVVTTARSRPD 45 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHC-CCEEEEEeCChhh
Confidence 5789999999999999998888874 9999999887543
No 385
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=94.71 E-value=0.41 Score=44.60 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=62.2
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc--CCc---EEeeCCCcccccCCCcccEEE
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL--GAD---LAIDYTKENIEDLPEKFDVVF 219 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~--g~~---~~~~~~~~~~~~~~~~~d~vi 219 (284)
...++++++||-+| +|. |..+..+++.. +++++.++.+++..+.+++. +.. .+...+.....-..+.||+|+
T Consensus 261 ~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~ 337 (475)
T PLN02336 261 KLDLKPGQKVLDVG-CGI-GGGDFYMAENF-DVHVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVIY 337 (475)
T ss_pred hcCCCCCCEEEEEe-ccC-CHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEEE
Confidence 34567889999999 443 66677788874 88999999998888777542 211 111111111111134699998
Q ss_pred eCCC-----C----cHHHHHhhccCCEEEEEc
Q 023273 220 DAVG-----Q----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 220 d~~g-----~----~~~~~~~l~~~G~~v~~g 242 (284)
.... + +..+.+.|+++|++++..
T Consensus 338 s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 338 SRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred ECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 7422 2 268889999999998764
No 386
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.70 E-value=0.11 Score=43.17 Aligned_cols=68 Identities=25% Similarity=0.361 Sum_probs=51.0
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh--hHHHHHHcCCcEEeeCCCc---ccccCCCcccEEEeCCC
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~---~~~~~~~~~d~vid~~g 223 (284)
|+|+|++|.+|...++.+.. .+.+|.++.+++. +...++..|...+ .-+-+ .+.+.-+|+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAALKGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHHcCCceEEeecC
Confidence 78999999999999999998 5999999999764 3556677887533 32222 23333579999999887
No 387
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.69 E-value=0.11 Score=44.84 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=56.0
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcCCcEE---eeCCCccc------------
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA---IDYTKENI------------ 208 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~------------ 208 (284)
..+.++-.+++|+|++.++|++.+..++.. |.+|.++.++.+|+..++ +++.... +.+...+.
T Consensus 27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~ 105 (331)
T KOG1210|consen 27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE 105 (331)
T ss_pred hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence 345566689999999999999999999984 999999999999988774 4442111 11211111
Q ss_pred -ccCCCcccEEEeCCCC
Q 023273 209 -EDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 209 -~~~~~~~d~vid~~g~ 224 (284)
++....+|.+|.|+|.
T Consensus 106 l~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 106 LRDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhhccCCcceEEEecCc
Confidence 1113468999999883
No 388
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.69 E-value=0.16 Score=44.52 Aligned_cols=73 Identities=22% Similarity=0.273 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc----CC---cEEeeCC---CcccccCCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA---DLAIDYT---KENIEDLPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~----g~---~~~~~~~---~~~~~~~~~~~d~vi 219 (284)
.|++|+|+|++|.+|...+..+... |.+|+++.++.++.+.+..+ +. -.++..+ ...+.+.-+++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 5789999999999999988888774 89999888876543332221 11 1122111 112223345799999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 83 h~A~ 86 (322)
T PLN02986 83 HTAS 86 (322)
T ss_pred EeCC
Confidence 9876
No 389
>PRK12743 oxidoreductase; Provisional
Probab=94.68 E-value=0.21 Score=42.20 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=45.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH----HHcCCc-EEe--eCCC-ccccc-------CCCc
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGAD-LAI--DYTK-ENIED-------LPEK 214 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~----~~~g~~-~~~--~~~~-~~~~~-------~~~~ 214 (284)
+++++|+|+++++|..+++.+... |++|+++.+ +.++.+.+ +..+.. ..+ |-.+ +.... ..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999988884 999988765 43333322 334432 222 2211 11111 1246
Q ss_pred ccEEEeCCC
Q 023273 215 FDVVFDAVG 223 (284)
Q Consensus 215 ~d~vid~~g 223 (284)
+|++|.++|
T Consensus 81 id~li~~ag 89 (256)
T PRK12743 81 IDVLVNNAG 89 (256)
T ss_pred CCEEEECCC
Confidence 899999887
No 390
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.63 E-value=0.25 Score=40.42 Aligned_cols=67 Identities=22% Similarity=0.256 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCcccccCCCcccEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~d~vid~~ 222 (284)
-.|++++|.| .|.+|..+++.+... |.+|++.+.++++.+.+++ ++.. .++..+ +. ...+|+++-|+
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~--l~--~~~~Dv~vp~A 93 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGAT-VVAPEE--IY--SVDADVFAPCA 93 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE-EEcchh--hc--cccCCEEEecc
Confidence 4678999999 799999999999984 9999999998888776654 3543 333211 11 12577777554
No 391
>PRK08219 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.21 Score=41.09 Aligned_cols=71 Identities=17% Similarity=0.265 Sum_probs=47.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCcEEeeCCCc---ccccC---CCcccEEEeCCC
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE---NIEDL---PEKFDVVFDAVG 223 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~---~~~~~---~~~~d~vid~~g 223 (284)
.++++|+|++|.+|...+..+.. . .+|++++++.++.+.+.+ ....+++..+-. .+... -+++|.+|.++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 36899999999999999888877 4 889999998777655543 211222222111 11111 136999999887
No 392
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.59 E-value=0.17 Score=39.93 Aligned_cols=73 Identities=22% Similarity=0.367 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhHHHHHHcCCcEEeeCCC----ccccc----C---CCcccE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTK----ENIED----L---PEKFDV 217 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~~----~~~~~----~---~~~~d~ 217 (284)
.|-.-+|+|+++++|.++++..... |+.++.++... ...+.++++|...++...+ .+... . -+..|+
T Consensus 8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4555689999999999988877764 89999999744 4567778999765554322 11111 1 346899
Q ss_pred EEeCCC
Q 023273 218 VFDAVG 223 (284)
Q Consensus 218 vid~~g 223 (284)
.++|+|
T Consensus 87 ~vncag 92 (260)
T KOG1199|consen 87 LVNCAG 92 (260)
T ss_pred eeeccc
Confidence 999988
No 393
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.58 E-value=0.19 Score=44.69 Aligned_cols=76 Identities=21% Similarity=0.193 Sum_probs=49.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-Hc--CC-cEEeeCC---CcccccCCCcccEEE
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL--GA-DLAIDYT---KENIEDLPEKFDVVF 219 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~--g~-~~~~~~~---~~~~~~~~~~~d~vi 219 (284)
+-..+.+|||+|++|.+|...++.+... |.+|++++++.++...+. .+ +. -.++..+ .+.+.+..+++|+||
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 3456789999999999999999988874 999999888766544332 22 11 1122211 111222234689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 85 h~A~ 88 (353)
T PLN02896 85 HVAA 88 (353)
T ss_pred ECCc
Confidence 8875
No 394
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=94.57 E-value=1 Score=37.59 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=61.6
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCCc-----------------EEeeCCCcc
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-----------------LAIDYTKEN 207 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~~-----------------~~~~~~~~~ 207 (284)
....++.+|+|.| | +-|.-+..+|.. |.+|+.++.++.-.+.+.+ .+.. .++.-+--.
T Consensus 39 l~~~~~~rvLvPg-C-Gkg~D~~~LA~~--G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~ 114 (226)
T PRK13256 39 LNINDSSVCLIPM-C-GCSIDMLFFLSK--GVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFN 114 (226)
T ss_pred cCCCCCCeEEEeC-C-CChHHHHHHHhC--CCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcC
Confidence 3445678999998 4 457778888875 9999999999988777633 2211 111111111
Q ss_pred cc---cCCCcccEEEeCCC--C--c-------HHHHHhhccCCEEEEEcC
Q 023273 208 IE---DLPEKFDVVFDAVG--Q--C-------DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 208 ~~---~~~~~~d~vid~~g--~--~-------~~~~~~l~~~G~~v~~g~ 243 (284)
+. +..+.+|.|+|.+- . + +.+.++|+++|+++.+..
T Consensus 115 l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 115 LPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred CCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 11 11246999999754 2 1 578889999999988754
No 395
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.55 E-value=0.3 Score=39.72 Aligned_cols=91 Identities=21% Similarity=0.202 Sum_probs=56.9
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEe
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD 220 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid 220 (284)
....++.+||-+|+ +.|..+..+++. +.+|++++.+++-.+.+++ .+.. .....+.... ...+.+|+|+.
T Consensus 26 ~~~~~~~~vLDiGc--G~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~ 100 (195)
T TIGR00477 26 VKTVAPCKTLDLGC--GQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFS 100 (195)
T ss_pred hccCCCCcEEEeCC--CCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEE
Confidence 34455678999983 667788888874 7899999999887766543 2221 1111111111 12356999986
Q ss_pred CCC----C-------cHHHHHhhccCCEEEEE
Q 023273 221 AVG----Q-------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 221 ~~g----~-------~~~~~~~l~~~G~~v~~ 241 (284)
+.- + ...+.+.|+++|+++.+
T Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 101 TVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred ecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 521 1 25778889999996555
No 396
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.54 E-value=0.18 Score=42.71 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=29.0
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
.+++++|+|++ +++|.+.++..... |++|+++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~ 42 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG 42 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence 57899999986 79999988877774 9999988654
No 397
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.52 E-value=0.13 Score=46.63 Aligned_cols=42 Identities=24% Similarity=0.342 Sum_probs=35.4
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+...+.+|+|+|++|.+|..+++.+... |.+|++++++..+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~ 96 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSG 96 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhh
Confidence 44566789999999999999999888874 9999999987654
No 398
>PRK06128 oxidoreductase; Provisional
Probab=94.51 E-value=0.21 Score=43.42 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
..++++||+|++|++|.+.++..... |++|+++.++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~ 88 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE-GADIALNYLP 88 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence 35789999999999999988888874 9998887654
No 399
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.51 E-value=0.22 Score=43.53 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=60.5
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
.......+++|+| +|..|.+.+......++ .++.+..+++++.+.+. ++... .+.....+..+.-.+.|+|+.|+.
T Consensus 120 La~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~-~~~~~~~~~~~av~~aDiVitaT~ 197 (304)
T PRK07340 120 LAPAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL-GPTAEPLDGEAIPEAVDLVVTATT 197 (304)
T ss_pred hCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc-CCeeEECCHHHHhhcCCEEEEccC
Confidence 3335677999999 89999998888765345 46888888888766553 33211 000001223333468999999988
Q ss_pred CcH-HHHHhhccCCEEEEEcCC
Q 023273 224 QCD-KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 224 ~~~-~~~~~l~~~G~~v~~g~~ 244 (284)
+.+ ..-..++++-.+..+|.+
T Consensus 198 s~~Pl~~~~~~~g~hi~~iGs~ 219 (304)
T PRK07340 198 SRTPVYPEAARAGRLVVAVGAF 219 (304)
T ss_pred CCCceeCccCCCCCEEEecCCC
Confidence 521 111136777777777754
No 400
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.48 E-value=0.46 Score=39.40 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=58.7
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-HHcCCcE-----------------EeeCCCccc
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-----------------AIDYTKENI 208 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-----------------~~~~~~~~~ 208 (284)
...++.+||+.| .+.|.-++.+|.. |++|++++.++.-++.+ ++.+... ++..+-..+
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~~--G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAEQ--GHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHhC--CCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 445678999998 4678888888874 99999999999877765 2332110 011111111
Q ss_pred cc-CCCcccEEEeCCC--C---------cHHHHHhhccCCEEEEE
Q 023273 209 ED-LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 209 ~~-~~~~~d~vid~~g--~---------~~~~~~~l~~~G~~v~~ 241 (284)
.. ....+|.|+|... . ...+.++|+++|++.++
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 11 1246899999653 1 26788999999975543
No 401
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.47 E-value=0.17 Score=44.37 Aligned_cols=94 Identities=19% Similarity=0.270 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH-HcC----CcEEe--eCCCcccc----------cC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----ADLAI--DYTKENIE----------DL 211 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~-~~g----~~~~~--~~~~~~~~----------~~ 211 (284)
..+.+++|+|+++++|..+++-.... |++|+...++.++.+.++ ++. ...+. .-+-.+.. ..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 45689999999999999988887774 899999999987766553 222 22221 11111111 12
Q ss_pred CCcccEEEeCCCCc--------------------------HHHHHhhccC--CEEEEEcC
Q 023273 212 PEKFDVVFDAVGQC--------------------------DKALKAVKEG--GRVVSIIG 243 (284)
Q Consensus 212 ~~~~d~vid~~g~~--------------------------~~~~~~l~~~--G~~v~~g~ 243 (284)
....|+.|+++|-. +.++..|+.. +|+|.++.
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS 171 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSS 171 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 45789999888720 3456666655 89999865
No 402
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.46 E-value=0.18 Score=44.22 Aligned_cols=73 Identities=21% Similarity=0.263 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH---c-CC---cEEe--eCC-CcccccCCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---L-GA---DLAI--DYT-KENIEDLPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~---~-g~---~~~~--~~~-~~~~~~~~~~~d~vi 219 (284)
.++++||+|++|.+|...+..+... |++|++++++.++...... . +. ...+ |-. .+.+.+.-+++|++|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 4789999999999999999888874 9999888876654332211 1 11 1122 211 112223334689999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 83 h~A~ 86 (325)
T PLN02989 83 HTAS 86 (325)
T ss_pred EeCC
Confidence 9886
No 403
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.42 E-value=0.2 Score=43.89 Aligned_cols=73 Identities=21% Similarity=0.324 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH---HHHHHcC-C-c--EEeeCC---CcccccCCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL---DLLRSLG-A-D--LAIDYT---KENIEDLPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~---~~~~~~g-~-~--~~~~~~---~~~~~~~~~~~d~vi 219 (284)
.+..|+|+||+|-+|.+.+..+... |+.|..++|++++. +.++++. + + .++..+ .+.+.+.-.|+|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 6789999999999999999999994 99999999987763 3455554 1 1 122211 222444456899999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.++.
T Consensus 84 H~As 87 (327)
T KOG1502|consen 84 HTAS 87 (327)
T ss_pred EeCc
Confidence 8764
No 404
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.40 E-value=0.3 Score=41.26 Aligned_cols=100 Identities=26% Similarity=0.356 Sum_probs=61.0
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE---EeeCC--Ccccc-cC
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL---AIDYT--KENIE-DL 211 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~---~~~~~--~~~~~-~~ 211 (284)
+...++.||++|+-.| .+.|.++..+++..+ ..+|+..+..+++.+.++ .+|... +.+.+ .+.+. ..
T Consensus 33 ~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~ 110 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL 110 (247)
T ss_dssp HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred HHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence 3568999999999988 355667777777652 358999999999887774 455322 12221 11121 12
Q ss_pred CCcccEEE-eCCCC---cHHHHHhh-ccCCEEEEEcCC
Q 023273 212 PEKFDVVF-DAVGQ---CDKALKAV-KEGGRVVSIIGS 244 (284)
Q Consensus 212 ~~~~d~vi-d~~g~---~~~~~~~l-~~~G~~v~~g~~ 244 (284)
...+|.|| |--.- ...+.+.| +++|+++.+.-+
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~ 148 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC 148 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 35688764 54332 37888999 899999988643
No 405
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.40 E-value=0.23 Score=41.57 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKL 189 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~ 189 (284)
++.+++|+|++|.+|...+...... |+++++. .++.++.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~-g~~v~~~~~r~~~~~ 42 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEE-GYDIAVNYARSRKAA 42 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHH
Confidence 4679999999999999999888884 8888764 5555554
No 406
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.37 E-value=0.43 Score=42.25 Aligned_cols=82 Identities=20% Similarity=0.308 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCc----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---- 225 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~---- 225 (284)
.|.+|.|+| .|.+|...++.++. +|.+|++.++++++...... . ..++.+..+..|+|+-+....
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~-~G~~V~~~d~~~~~~~~~~~--------~-~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAG-FGATITAYDAYPNKDLDFLT--------Y-KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEeCChhHhhhhhh--------c-cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 577999999 89999999999998 49999999987654321100 1 112334456789998887631
Q ss_pred ----HHHHHhhccCCEEEEEc
Q 023273 226 ----DKALKAVKEGGRVVSII 242 (284)
Q Consensus 226 ----~~~~~~l~~~G~~v~~g 242 (284)
...+..|+++..+|.++
T Consensus 214 ~li~~~~l~~mk~gavlIN~a 234 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAA 234 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcC
Confidence 46677888888777665
No 407
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.35 E-value=0.27 Score=41.61 Aligned_cols=41 Identities=17% Similarity=0.398 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLD 190 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~ 190 (284)
..+++++|+|+++++|.+.+...... |++|+++.+ ++++.+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~~~~~~~ 47 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQS-GVNIAFTYNSNVEEAN 47 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHH
Confidence 35789999999999999988887774 999887754 444443
No 408
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.35 E-value=0.17 Score=42.25 Aligned_cols=41 Identities=32% Similarity=0.490 Sum_probs=33.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEE-eCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~-~~~~~~~~~~ 192 (284)
+++++|+|++|.+|...+..+... |++++++ .+++++.+.+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~ 46 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQEL 46 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence 568999999999999988877774 8999988 8877665443
No 409
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.35 E-value=0.2 Score=42.53 Aligned_cols=34 Identities=26% Similarity=0.179 Sum_probs=27.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHhcCCeEEEEeC
Q 023273 150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATS 184 (284)
Q Consensus 150 ~g~~vlI~ga~--g~~G~~a~~~a~~~~g~~vi~~~~ 184 (284)
.+++++|+|++ +++|.+.++..... |++|++..+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~ 40 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYL 40 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEec
Confidence 47899999975 79999988887774 999887754
No 410
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.32 E-value=0.023 Score=52.51 Aligned_cols=82 Identities=26% Similarity=0.424 Sum_probs=58.6
Q ss_pred HhcccCCCCEEE----EEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCccc-EE
Q 023273 144 ERSAFSAGKSIL----VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD-VV 218 (284)
Q Consensus 144 ~~~~~~~g~~vl----I~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d-~v 218 (284)
...+.++|+.++ ++|++|++|.+++++++.. |..|+.+...+++....+. .+++ ++
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~------------------~~~~~~~ 87 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWG------------------DRFGALV 87 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcC------------------CcccEEE
Confidence 346778888888 8888999999999999996 9999987765552221111 2344 45
Q ss_pred EeCCCC------------cHHHHHhhccCCEEEEEcCC
Q 023273 219 FDAVGQ------------CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 219 id~~g~------------~~~~~~~l~~~G~~v~~g~~ 244 (284)
+|..+- ....++.|.++|+++.++..
T Consensus 88 ~d~~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 88 FDATGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEccc
Confidence 555441 15678888999999998754
No 411
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.31 E-value=0.23 Score=42.21 Aligned_cols=73 Identities=25% Similarity=0.389 Sum_probs=44.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCC---hhhHHHH-HHcCCcEEe--eCCC-cccccC-------CC
Q 023273 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSS---TAKLDLL-RSLGADLAI--DYTK-ENIEDL-------PE 213 (284)
Q Consensus 150 ~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~---~~~~~~~-~~~g~~~~~--~~~~-~~~~~~-------~~ 213 (284)
.+++++|+|+ ++++|++.++..... |++|+++.+. +++.+.+ ++++....+ |-.+ +...+. .+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999996 579999988777764 8999887543 3333333 334432222 2111 111111 25
Q ss_pred cccEEEeCCC
Q 023273 214 KFDVVFDAVG 223 (284)
Q Consensus 214 ~~d~vid~~g 223 (284)
.+|++++++|
T Consensus 84 ~iD~lvnnAG 93 (260)
T PRK06997 84 GLDGLVHSIG 93 (260)
T ss_pred CCcEEEEccc
Confidence 7999998875
No 412
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=94.31 E-value=0.13 Score=45.70 Aligned_cols=72 Identities=22% Similarity=0.146 Sum_probs=45.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCC----cccccCCCcccEEEeCCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----ENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~d~vid~~g 223 (284)
++|+|+|++|-+|...+..+....+.+|++++++.++...+.....-+++..+- ..+.+..+++|+||.+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 479999999999999888877633689999988665544332211112222111 112223457999998764
No 413
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.31 E-value=0.15 Score=39.40 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=53.2
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeC-------CCccc--ccCCCcccEEEeCCCC
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-------TKENI--EDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~--~~~~~~~d~vid~~g~ 224 (284)
|+|+| +|.+|...+..++.. +.+|..+.+++ +.+..++.|....... ..... ....+.+|++|-|+-+
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~-g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQA-GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHT-TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEEC-cCHHHHHHHHHHHHC-CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 68899 899998877777664 99999999988 7777776653211111 00000 1124679999999864
Q ss_pred --cHH----HHHhhccCCEEEEE
Q 023273 225 --CDK----ALKAVKEGGRVVSI 241 (284)
Q Consensus 225 --~~~----~~~~l~~~G~~v~~ 241 (284)
... +...+.++..++.+
T Consensus 78 ~~~~~~l~~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPNTTIVSL 100 (151)
T ss_dssp GGHHHHHHHHCTGEETTEEEEEE
T ss_pred cchHHHHHHHhhccCCCcEEEEE
Confidence 233 44444555566655
No 414
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.31 E-value=0.28 Score=42.22 Aligned_cols=94 Identities=26% Similarity=0.273 Sum_probs=64.5
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
..||+.......++..++ -.|.+|+|+|.+..+|.-.+.++... ++.|.++-.....+ .
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~t~~l-------------------~ 195 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHILTKDL-------------------S 195 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCCcHHH-------------------H
Confidence 346665555555555444 47999999997779999999999884 88888774432221 2
Q ss_pred cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (284)
+..+..|+++.++|.++ ---+.++++..++.+|..
T Consensus 196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecc
Confidence 22356899999998642 223567888888888854
No 415
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.13 Score=42.89 Aligned_cols=42 Identities=29% Similarity=0.453 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|++|...++..... |.+|+++.+++++.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence 5679999999999999998888874 99999999988766544
No 416
>PRK05599 hypothetical protein; Provisional
Probab=94.30 E-value=0.25 Score=41.54 Aligned_cols=70 Identities=24% Similarity=0.370 Sum_probs=45.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH----HHcCCc--EEeeCC--C-ccccc-------CCCcc
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD--LAIDYT--K-ENIED-------LPEKF 215 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~----~~~g~~--~~~~~~--~-~~~~~-------~~~~~ 215 (284)
++++|+|+++++|.+.++... . |.+|+++.+++++.+.+ ++.+.. ..+..+ + +.... ..+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H-GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999888765 3 89999999988776544 233322 222211 1 11111 13579
Q ss_pred cEEEeCCC
Q 023273 216 DVVFDAVG 223 (284)
Q Consensus 216 d~vid~~g 223 (284)
|++++++|
T Consensus 79 d~lv~nag 86 (246)
T PRK05599 79 SLAVVAFG 86 (246)
T ss_pred CEEEEecC
Confidence 99998877
No 417
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.30 E-value=0.13 Score=43.08 Aligned_cols=45 Identities=22% Similarity=0.332 Sum_probs=37.3
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
...++.+++|+|++|.+|...++..... |++|++++++.++.+.+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~ 52 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAV 52 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Confidence 3557899999999999999999888874 89999999987665443
No 418
>PRK05855 short chain dehydrogenase; Validated
Probab=94.28 E-value=0.2 Score=47.49 Aligned_cols=73 Identities=26% Similarity=0.318 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EEe--eCCCc-cccc-------CCCc
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAI--DYTKE-NIED-------LPEK 214 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~-------~~~~ 214 (284)
.+.+++|+||+|++|...++.+... |.+|+++.++.++.+.+. ..|.. ..+ |-.+. .... ..+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999999999999988887774 999999999877765442 23321 122 21111 1111 1346
Q ss_pred ccEEEeCCC
Q 023273 215 FDVVFDAVG 223 (284)
Q Consensus 215 ~d~vid~~g 223 (284)
+|++++++|
T Consensus 393 id~lv~~Ag 401 (582)
T PRK05855 393 PDIVVNNAG 401 (582)
T ss_pred CcEEEECCc
Confidence 999999987
No 419
>PRK00811 spermidine synthase; Provisional
Probab=94.26 E-value=0.25 Score=42.77 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC--------c---EEeeCCCcc-cccCCCccc
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--------D---LAIDYTKEN-IEDLPEKFD 216 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~--------~---~~~~~~~~~-~~~~~~~~d 216 (284)
.+.++||++|+ +.|..+..+++.....+|.+++.+++-.+.+++.-. + +++..+... +....+.+|
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yD 152 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFD 152 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCccc
Confidence 35678999993 446677777776224589999999998888875321 0 111111111 122245799
Q ss_pred EEEeCCCC-------------cHHHHHhhccCCEEEEEc
Q 023273 217 VVFDAVGQ-------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid~~g~-------------~~~~~~~l~~~G~~v~~g 242 (284)
+||.-... ++.+.++|+++|.++.-.
T Consensus 153 vIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 153 VIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 98753211 157789999999998753
No 420
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.20 E-value=0.22 Score=48.55 Aligned_cols=42 Identities=29% Similarity=0.381 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|++|++|.+.++..... |++|++++++.++.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~ 454 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAV 454 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence 4789999999999999998888874 99999999987766544
No 421
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.20 E-value=0.17 Score=44.63 Aligned_cols=74 Identities=22% Similarity=0.231 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH-HcCC--cEEe--eCCC-cccccCCCcccEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR-SLGA--DLAI--DYTK-ENIEDLPEKFDVVFDAV 222 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~-~~g~--~~~~--~~~~-~~~~~~~~~~d~vid~~ 222 (284)
.+.+|+|+|++|.+|...++.+...+ +.+|+++++++.+...+. .+.. ...+ |-.+ +.+.+.-+++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 46899999999999999888877642 267888887665543332 2221 1122 2111 12222235699999987
Q ss_pred C
Q 023273 223 G 223 (284)
Q Consensus 223 g 223 (284)
|
T Consensus 83 g 83 (324)
T TIGR03589 83 A 83 (324)
T ss_pred c
Confidence 6
No 422
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.18 E-value=0.16 Score=43.05 Aligned_cols=39 Identities=31% Similarity=0.441 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~ 189 (284)
.+++++|+|++|++|.+.++.+... |++|+++++++++.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~-G~~v~~~~~~~~~~ 46 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLAN-GANVVNADIHGGDG 46 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcccc
Confidence 4689999999999999988888774 99999998876543
No 423
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.16 E-value=0.22 Score=37.52 Aligned_cols=87 Identities=23% Similarity=0.389 Sum_probs=55.0
Q ss_pred EEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCC--hhh-HHHHHHcCCcEEeeCCCccccc-----------C-------
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVF-GASKVAATSS--TAK-LDLLRSLGADLAIDYTKENIED-----------L------- 211 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~--~~~-~~~~~~~g~~~~~~~~~~~~~~-----------~------- 211 (284)
|.|+|++|.+|..+.++.+... .++++.+... -++ .++++++.+..+.-.+...... .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5799999999999999999852 2678777653 233 3555778877655443221110 0
Q ss_pred -------CCcccEEEeCC-C--CcHHHHHhhccCCEEEE
Q 023273 212 -------PEKFDVVFDAV-G--QCDKALKAVKEGGRVVS 240 (284)
Q Consensus 212 -------~~~~d~vid~~-g--~~~~~~~~l~~~G~~v~ 240 (284)
...+|+++.+. | +..-.+..++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 24799999985 4 25778888887766653
No 424
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=94.15 E-value=0.21 Score=38.68 Aligned_cols=93 Identities=30% Similarity=0.440 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCCccccc-CCCcccEEEe
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED-LPEKFDVVFD 220 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~-~~~~~d~vid 220 (284)
+.+.+||-+| .+.|..+..++... .+.+++.++.+++..+.+++ .+.. .++..+-.+++. ..+.+|+|+.
T Consensus 2 ~~~~~iLDlG--cG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l~~~~~~~~D~I~~ 79 (152)
T PF13847_consen 2 KSNKKILDLG--CGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIEDLPQELEEKFDIIIS 79 (152)
T ss_dssp TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTCGCGCSSTTEEEEEE
T ss_pred CCCCEEEEec--CcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEeehhccccccCCCeeEEEE
Confidence 4678899888 35667777777432 36899999999998888865 4543 333333222322 1268999998
Q ss_pred CCC-----C----cHHHHHhhccCCEEEEEcC
Q 023273 221 AVG-----Q----CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 221 ~~g-----~----~~~~~~~l~~~G~~v~~g~ 243 (284)
... . ++.+.+.|+++|+++....
T Consensus 80 ~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 80 NGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp ESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 643 1 2678899999999986653
No 425
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.13 E-value=0.3 Score=41.77 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (284)
.+.+++|+|++|++|...++.+... |++++++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence 4679999999999999988887774 999999988654
No 426
>PRK09186 flagellin modification protein A; Provisional
Probab=94.13 E-value=0.14 Score=43.01 Aligned_cols=42 Identities=29% Similarity=0.486 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+++++|+|++|++|...+..+... |++++++.+++++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHH
Confidence 5789999999999999988888874 99999999887776544
No 427
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.12 E-value=0.27 Score=41.63 Aligned_cols=35 Identities=31% Similarity=0.374 Sum_probs=29.6
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 150 ~g~~vlI~ga--~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
.+++++|+|+ ++++|.+.++..... |++|+++.++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~ 42 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFG 42 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCc
Confidence 5789999998 799999988877774 9999988765
No 428
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.08 E-value=0.34 Score=45.22 Aligned_cols=70 Identities=24% Similarity=0.329 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-----hHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-----KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
..+++|+|+| .|.+|+.++.+++.. |.+|++++.+++ ..+.+++.|.....+.... ....+|+|+.+.|
T Consensus 14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence 3567999999 799999999999885 999999886542 2234556675544333221 2356899998888
Q ss_pred C
Q 023273 224 Q 224 (284)
Q Consensus 224 ~ 224 (284)
.
T Consensus 88 i 88 (480)
T PRK01438 88 W 88 (480)
T ss_pred c
Confidence 3
No 429
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.07 E-value=0.54 Score=39.44 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=60.3
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHHH----cCCcE---EeeCCCcc-cccC----
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL---AIDYTKEN-IEDL---- 211 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~---~~~~~~~~-~~~~---- 211 (284)
..+..+.++||-+| .+.|..++.+++.+. +.+++.++.+++..+.+++ .|... ++..+... +...
T Consensus 63 l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 63 LVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND 140 (234)
T ss_pred HHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence 45667788999998 356666666766543 4689999999998877754 34221 22211111 1111
Q ss_pred -CCcccEEEeCCC--C----cHHHHHhhccCCEEEE
Q 023273 212 -PEKFDVVFDAVG--Q----CDKALKAVKEGGRVVS 240 (284)
Q Consensus 212 -~~~~d~vid~~g--~----~~~~~~~l~~~G~~v~ 240 (284)
.+.||+||--.. . ++.++++|+++|.++.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 357998864332 2 3788999999998875
No 430
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.98 E-value=0.88 Score=39.33 Aligned_cols=77 Identities=25% Similarity=0.278 Sum_probs=53.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCCcH-
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD- 226 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~~- 226 (284)
.-.|++++|+|+++-+|...+.++... +++|+++.+..+.+. +..+.+|++++++|.+.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t~~L~-------------------~~~~~aDIvI~AtG~~~~ 215 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRTQNLP-------------------ELVKQADIIVGAVGKPEL 215 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCchhHH-------------------HHhccCCEEEEccCCCCc
Confidence 457899999995445999999988875 887777765322111 11257899999998532
Q ss_pred HHHHhhccCCEEEEEcCC
Q 023273 227 KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 227 ~~~~~l~~~G~~v~~g~~ 244 (284)
--.+.++++..++.++..
T Consensus 216 v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 216 IKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred CCHHHcCCCCEEEEEEEe
Confidence 223568888888777754
No 431
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=93.98 E-value=0.17 Score=49.19 Aligned_cols=78 Identities=15% Similarity=0.081 Sum_probs=49.2
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCC--C-cc-cccCCCcccEEEeC
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K-EN-IEDLPEKFDVVFDA 221 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~-~~-~~~~~~~~d~vid~ 221 (284)
....++++|+|+||+|-+|...++.+...++.+|+++++.+.+.........-+++.-+ + .. ....-.++|+||.+
T Consensus 310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence 34567889999999999999999877753368999999866543322111111222211 1 11 22223579999997
Q ss_pred CC
Q 023273 222 VG 223 (284)
Q Consensus 222 ~g 223 (284)
++
T Consensus 390 Aa 391 (660)
T PRK08125 390 VA 391 (660)
T ss_pred cc
Confidence 75
No 432
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.98 E-value=0.28 Score=42.79 Aligned_cols=58 Identities=28% Similarity=0.391 Sum_probs=49.8
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEee
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID 202 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~ 202 (284)
..+.+.||.++||-.-+|.+|...+-++... |++.+++.. +.||...++.+|+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3578999999999999999999999999984 999998865 778888999999876543
No 433
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.93 E-value=0.23 Score=41.09 Aligned_cols=38 Identities=18% Similarity=0.382 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++++|+|++|++|...++.+... |.+|+++.+++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~-G~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL-GHQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCccc
Confidence 4678999999999999988888874 9999999887654
No 434
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.91 E-value=0.66 Score=40.26 Aligned_cols=86 Identities=26% Similarity=0.328 Sum_probs=54.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcE---Eee---CCCcccccCCCcccEEEeCCCC--
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AID---YTKENIEDLPEKFDVVFDAVGQ-- 224 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~---~~~~~~~~~~~~~d~vid~~g~-- 224 (284)
+|.|+| +|.+|...+..+... |.+|+++++++++.+.+++.|... ... ....+.... +.+|++|-++..
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~ 78 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ 78 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence 689999 799998877777663 889999999888877777655321 000 001111222 679999988764
Q ss_pred cHHHHHhhc----cCCEEEEE
Q 023273 225 CDKALKAVK----EGGRVVSI 241 (284)
Q Consensus 225 ~~~~~~~l~----~~G~~v~~ 241 (284)
...+++.++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 344444443 34456554
No 435
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=93.90 E-value=0.17 Score=45.04 Aligned_cols=38 Identities=24% Similarity=0.293 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++|||+|++|.+|..+++.+... |.+|+++++++..
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~ 40 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPT 40 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCcc
Confidence 4689999999999999999988884 8999999876554
No 436
>PRK01581 speE spermidine synthase; Validated
Probab=93.86 E-value=0.88 Score=40.66 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC-----------c--EEeeCCCcc-cccCCCc
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-----------D--LAIDYTKEN-IEDLPEK 214 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~-----------~--~~~~~~~~~-~~~~~~~ 214 (284)
...++||++| |+.|.++..+++.-...++++++.+++-.+.++++.. . +++..+... +....+.
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 4456999999 4567677777776223689999999998888886210 0 111111111 1222457
Q ss_pred ccEEEeCC----CC----------cHHHHHhhccCCEEEEEcC
Q 023273 215 FDVVFDAV----GQ----------CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 215 ~d~vid~~----g~----------~~~~~~~l~~~G~~v~~g~ 243 (284)
+|+||--. +. ++.+.++|+++|.++.-..
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99976432 11 2578889999999987644
No 437
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.27 Score=47.68 Aligned_cols=41 Identities=27% Similarity=0.445 Sum_probs=35.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
+++++|+|++|++|...+...... |++|+++++++++.+.+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~ 411 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEA-GATVFLVARNGEALDEL 411 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence 678999999999999988887774 99999999988776554
No 438
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=93.81 E-value=1.4 Score=40.66 Aligned_cols=96 Identities=22% Similarity=0.249 Sum_probs=57.7
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCccc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFD 216 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d 216 (284)
....+.+|++||-+|+ | .|..+..++..+ .+.+++.++.++++.+.++ ..|... ++..+...+. ....||
T Consensus 244 ~~l~~~~g~~VLDlga-G-~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-~~~~fD 320 (445)
T PRK14904 244 LLLNPQPGSTVLDLCA-A-PGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSFS-PEEQPD 320 (445)
T ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-cCCCCC
Confidence 4556788999998884 2 233333333332 1458999999999887764 345432 2222222221 134699
Q ss_pred EEEe---CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273 217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid---~~g~----------------------------~~~~~~~l~~~G~~v~~g 242 (284)
.|+- |+|. +..++++|+++|+++...
T Consensus 321 ~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvyst 377 (445)
T PRK14904 321 AILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYAT 377 (445)
T ss_pred EEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8873 4441 135677899999998654
No 439
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.80 E-value=0.38 Score=41.66 Aligned_cols=57 Identities=25% Similarity=0.430 Sum_probs=46.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcCCcEEee
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID 202 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~ 202 (284)
..+.++||++|+- +.+|.+|.+.+.+|+.+ |++.+++.. +.+|.+.++.+|++.++.
T Consensus 55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCCEEEE-cCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 4577999996555 55999999999999995 999888764 788999999999876543
No 440
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=93.78 E-value=0.082 Score=46.21 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=46.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g 223 (284)
+++|+|++|.+|...++.+... |.+|+++++++++.....+.+...+ .|..+ +.+.+.-+++|+||++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 6899999999999999888874 8999999987765443333332211 12211 123333457899998875
No 441
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.77 E-value=1.1 Score=32.78 Aligned_cols=85 Identities=19% Similarity=0.250 Sum_probs=58.6
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCc---ccccC-CCcccEEEeCCCCc----
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE---NIEDL-PEKFDVVFDAVGQC---- 225 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~-~~~~d~vid~~g~~---- 225 (284)
|+|.| .|.+|...++.++. .+.++++++.++++.+.+++.+.. ++.-+.. .+.+. .+.++.++-++++.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~ 77 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL 77 (116)
T ss_dssp EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence 57888 79999999999998 477999999999999999988854 3332221 12222 35788888887752
Q ss_pred --HHHHHhhccCCEEEEE
Q 023273 226 --DKALKAVKEGGRVVSI 241 (284)
Q Consensus 226 --~~~~~~l~~~G~~v~~ 241 (284)
-..++.+.+..+++..
T Consensus 78 ~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 78 LIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 2344445566666644
No 442
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=93.76 E-value=0.15 Score=43.38 Aligned_cols=64 Identities=22% Similarity=0.241 Sum_probs=46.0
Q ss_pred EEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCC-cccEEEeCCC
Q 023273 154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-KFDVVFDAVG 223 (284)
Q Consensus 154 vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~d~vid~~g 223 (284)
|+|+|++|-+|...+..... .|..|+++++++.+.+........ + -+.+.+... ++|+|||-+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~-~gh~v~iltR~~~~~~~~~~~~v~---~--~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRK-GGHQVTILTRRPPKASQNLHPNVT---L--WEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHh-CCCeEEEEEcCCcchhhhcCcccc---c--cchhhhcccCCCCEEEECCC
Confidence 58999999999999999888 489999999988776643332211 1 111222223 7999999988
No 443
>PF00044 Gp_dh_N: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; InterPro: IPR020828 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) plays an important role in glycolysis and gluconeogenesis [] by reversibly catalysing the oxidation and phosphorylation of D-glyceraldehyde-3-phosphate to 1,3-diphospho-glycerate. The enzyme exists as a tetramer of identical subunits, each containing 2 conserved functional domains: an NAD-binding domain, and a highly conserved catalytic domain []. The enzyme has been found to bind to actin and tropomyosin, and may thus have a role in cytoskeleton assembly. Alternatively, the cytoskeleton may provide a framework for precise positioning of the glycolytic enzymes, thus permitting efficient passage of metabolites from enzyme to enzyme []. GAPDH displays diverse non-glycolytic functions as well, its role depending upon its subcellular location. For instance, the translocation of GAPDH to the nucleus acts as a signalling mechanism for programmed cell death, or apoptosis []. The accumulation of GAPDH within the nucleus is involved in the induction of apoptosis, where GAPDH functions in the activation of transcription. The presence of GAPDH is associated with the synthesis of pro-apoptotic proteins like BAX, c-JUN and GAPDH itself. GAPDH has been implicated in certain neurological diseases: GAPDH is able to bind to the gene products from neurodegenerative disorders such as Huntington's disease, Alzheimer's disease, Parkinson's disease and Machado-Joseph disease through stretches encoded by their CAG repeats. Abnormal neuronal apoptosis is associated with these diseases. Propargylamines such as deprenyl increase neuronal survival by interfering with apoptosis signalling pathways via their binding to GAPDH, which decreases the synthesis of pro-apoptotic proteins []. This entry represents the N-terminal domain which is a Rossmann NAD(P) binding fold.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 2G82_Q 1CER_R 1ZNQ_Q 3GPD_G 1U8F_R 3DOC_B 2YYY_A 1GPD_G 4GPD_1 2I5P_O ....
Probab=93.75 E-value=0.38 Score=37.41 Aligned_cols=105 Identities=20% Similarity=0.243 Sum_probs=63.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC---ChhhHHHHHHcC-------Cc------E-EeeCC---------Cc
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLG-------AD------L-AIDYT---------KE 206 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~---~~~~~~~~~~~g-------~~------~-~~~~~---------~~ 206 (284)
+|.|.| -|.+|+.+++.+.......++++.. +.+....+-+.. .. . .++-. ..
T Consensus 2 kVgING-fGRIGR~v~r~~~~~~~~evvaInd~~~~~~~~a~LlkyDs~~G~~~~~v~~~~~~l~v~G~~I~~~~~~dp~ 80 (151)
T PF00044_consen 2 KVGING-FGRIGRLVLRAALDQPDIEVVAINDPAPDPEYLAYLLKYDSVHGRFPGDVEVDDDGLIVNGKKIKVTEERDPE 80 (151)
T ss_dssp EEEEES-TSHHHHHHHHHHHTSTTEEEEEEEESSSSHHHHHHHHHEETTTESGSSHEEEETTEEEETTEEEEEEHTSSGG
T ss_pred EEEEEC-CCcccHHHHHhhcccceEEEEEEecccccchhhhhhhhccccccceecccccccceeEeecccccchhhhhhc
Confidence 578989 9999999999998644556665542 244444443321 00 0 01100 01
Q ss_pred ccccCCCcccEEEeCCCCc---HHHHHhhccCCEEEEEcCCCCCC-ceeEEEeccH
Q 023273 207 NIEDLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-ASSFVLTSDG 258 (284)
Q Consensus 207 ~~~~~~~~~d~vid~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 258 (284)
.++....++|+|+||+|.+ ..+...+..+-+=|+++.+.... ..+++++.+.
T Consensus 81 ~i~W~~~gvDiVvEcTG~f~~~~~~~~hl~~GakkViisap~~~~~~~t~V~GvN~ 136 (151)
T PF00044_consen 81 EIPWGELGVDIVVECTGKFRTRENAEAHLDAGAKKVIISAPSKDDADPTFVMGVNH 136 (151)
T ss_dssp GSTHHHHTESEEEETSSSTHSHHHHTHHHHTTESEEEESSS-SSSSSEEE-TTTSG
T ss_pred ccccccccccEEEeccccceecccccccccccccceeeccccccccCCeEEeeccH
Confidence 1111124899999999964 56667888998888898887665 6666665443
No 444
>PRK09135 pteridine reductase; Provisional
Probab=93.70 E-value=0.4 Score=39.95 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
.+.+++|+|++|.+|...++..... |++|+++.++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~-g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAA-GYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 4578999999999999988888774 99999998753
No 445
>PLN00016 RNA-binding protein; Provisional
Probab=93.69 E-value=0.38 Score=43.35 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=57.9
Q ss_pred CCCEEEEE----cCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH-----------HHcCCcEEeeCCCcccccC--C
Q 023273 150 AGKSILVL----GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----------RSLGADLAIDYTKENIEDL--P 212 (284)
Q Consensus 150 ~g~~vlI~----ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~--~ 212 (284)
...+|||+ |++|.+|...+..+... |.+|+++++++++...+ ...+...+ ..+..++... .
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~~~~~ 128 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPADVKSKVAG 128 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHHHHHhhhcc
Confidence 44689999 99999999999888874 89999999876543211 12232222 1111112222 3
Q ss_pred CcccEEEeCCCC----cHHHHHhhccC--CEEEEEcC
Q 023273 213 EKFDVVFDAVGQ----CDKALKAVKEG--GRVVSIIG 243 (284)
Q Consensus 213 ~~~d~vid~~g~----~~~~~~~l~~~--G~~v~~g~ 243 (284)
.++|+||++.+. ...+++.++.. .++|.++.
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 579999999874 23455555433 47887754
No 446
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.68 E-value=0.25 Score=43.13 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc-C---CcEEeeCC---CcccccCCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL-G---ADLAIDYT---KENIEDLPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~-g---~~~~~~~~---~~~~~~~~~~~d~vi 219 (284)
.+.+|||+|++|.+|...+..+... |.+|++++++.++.... ... + ....+..+ ...+...-+++|.||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 3578999999999999999888884 99999888865543222 111 1 11122111 112333345789999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 82 h~A~ 85 (322)
T PLN02662 82 HTAS 85 (322)
T ss_pred EeCC
Confidence 9875
No 447
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.66 E-value=0.43 Score=40.31 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=30.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
..+++++|+|++|++|...++..... |++++++.++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~-G~~vvi~~~~ 40 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE-KAKVVINYRS 40 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCC
Confidence 35789999999999999999888874 8888887764
No 448
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.64 E-value=0.44 Score=41.21 Aligned_cols=39 Identities=28% Similarity=0.356 Sum_probs=32.4
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
....+.++||+|++|++|...+...... |++|+++.+++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~-G~~V~l~~r~~ 80 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKE-GADIAIVYLDE 80 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 3445789999999999999988887774 99999888764
No 449
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=93.59 E-value=0.56 Score=44.34 Aligned_cols=84 Identities=24% Similarity=0.394 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----- 224 (284)
.|++|.|+| .|.+|...++.++. +|.+|++.++.... +.....+.... ++.+..+..|+|+.+...
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKA-FGMKVIAYDPYISP-ERAAQLGVELV------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCh-hHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence 588999999 89999999999998 59999999875322 22344554321 233445678998887652
Q ss_pred --c-HHHHHhhccCCEEEEEc
Q 023273 225 --C-DKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g 242 (284)
. ...+.+|+++..+|.++
T Consensus 210 ~li~~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCA 230 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECC
Confidence 1 57888999998888775
No 450
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.59 E-value=0.29 Score=43.42 Aligned_cols=91 Identities=16% Similarity=0.210 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHH-HcCCcEEeeCCCcccccCCCcccEEEeCCCCcH
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD 226 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 226 (284)
-.+.+|+|+||+|.+|..+++......+ .+++++.++.++...+. +++...+. ++.+.....|+|+.+++.++
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence 4678999999999999998888764224 57888888877776653 34321111 12333457899999887532
Q ss_pred ---HHHHhhccCCEEEEEcCC
Q 023273 227 ---KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 227 ---~~~~~l~~~G~~v~~g~~ 244 (284)
.-.+.+++.-.++.++.|
T Consensus 228 ~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 228 GVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCHHHhCCCeEEEEecCC
Confidence 112455666666666665
No 451
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.59 E-value=0.64 Score=37.99 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc--EEeeCCC-ccccc-C-CCcccEEEe
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTK-ENIED-L-PEKFDVVFD 220 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~~-~-~~~~d~vid 220 (284)
++.+||-+|+ +.|..+..+++...+.+++.++.+++..+.+++ .+.. .++..+. ..+.. . ...+|.++-
T Consensus 40 ~~~~VLDiGc--GtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~ 117 (202)
T PRK00121 40 DAPIHLEIGF--GKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYL 117 (202)
T ss_pred CCCeEEEEcc--CCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEE
Confidence 6788999983 447777777776445789999999998877753 2222 2233332 22221 2 346898875
Q ss_pred CCCC-----------------cHHHHHhhccCCEEEEEc
Q 023273 221 AVGQ-----------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 221 ~~g~-----------------~~~~~~~l~~~G~~v~~g 242 (284)
.... ++.+.+.|+++|.+++..
T Consensus 118 ~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 118 NFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred ECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 3221 367788999999998754
No 452
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional
Probab=93.58 E-value=1 Score=39.73 Aligned_cols=93 Identities=19% Similarity=0.198 Sum_probs=58.4
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH---H-cCC---cEEeeCCCcccccCCCcccE
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR---S-LGA---DLAIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~---~-~g~---~~~~~~~~~~~~~~~~~~d~ 217 (284)
.....+|++||-+| ++.|..+..++.. +...|+.++.++.-....+ . .+. ..++..+-..++. .+.||+
T Consensus 117 ~l~~l~g~~VLDIG--CG~G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i~~~~~d~e~lp~-~~~FD~ 192 (322)
T PRK15068 117 HLSPLKGRTVLDVG--CGNGYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPA-LKAFDT 192 (322)
T ss_pred hhCCCCCCEEEEec--cCCcHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEeCCHHHCCC-cCCcCE
Confidence 34445788999998 3567788888887 4567999998876443321 2 111 1222222222222 467999
Q ss_pred EEeCCC-----C----cHHHHHhhccCCEEEEE
Q 023273 218 VFDAVG-----Q----CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 218 vid~~g-----~----~~~~~~~l~~~G~~v~~ 241 (284)
|+...- + +..+.+.|+++|++++-
T Consensus 193 V~s~~vl~H~~dp~~~L~~l~~~LkpGG~lvl~ 225 (322)
T PRK15068 193 VFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLE 225 (322)
T ss_pred EEECChhhccCCHHHHHHHHHHhcCCCcEEEEE
Confidence 987421 2 36888999999999864
No 453
>PLN02366 spermidine synthase
Probab=93.56 E-value=0.46 Score=41.60 Aligned_cols=93 Identities=17% Similarity=0.274 Sum_probs=57.2
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcCCc----------EEeeCCCcc-cccC-CCc
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGAD----------LAIDYTKEN-IEDL-PEK 214 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g~~----------~~~~~~~~~-~~~~-~~~ 214 (284)
..+.++||++|+ | -|..+..+++. .. .++.+++.+++-.+.+++.-.. .++..+... +.+. .+.
T Consensus 89 ~~~pkrVLiIGg-G-~G~~~rellk~-~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~ 165 (308)
T PLN02366 89 IPNPKKVLVVGG-G-DGGVLREIARH-SSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGT 165 (308)
T ss_pred CCCCCeEEEEcC-C-ccHHHHHHHhC-CCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCC
Confidence 345789999993 3 36667777776 44 5788889988877777663210 111111111 1222 356
Q ss_pred ccEEEe-CCCC------------cHHHHHhhccCCEEEEEcC
Q 023273 215 FDVVFD-AVGQ------------CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 215 ~d~vid-~~g~------------~~~~~~~l~~~G~~v~~g~ 243 (284)
+|+||. .... ++.+.++|+++|.++.-++
T Consensus 166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~ 207 (308)
T PLN02366 166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAE 207 (308)
T ss_pred CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcC
Confidence 999864 3210 2578899999999986543
No 454
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=93.55 E-value=0.38 Score=44.35 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=45.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh-HHHHHH-cC--CcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRS-LG--ADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~-~~~~~~-~g--~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
++..+|+|+|++|-+|...+..+... |.+|+++++.... ...... .+ ....++.+ .......++|+||.+++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~-G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~D--i~~~~~~~~D~ViHlAa 193 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGR-GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD--VVEPILLEVDQIYHLAC 193 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCCCccHhHhhhhccCCceEEEECc--cccccccCCCEEEECce
Confidence 45679999999999999999988884 9999998864321 111111 11 11122211 11222357999999875
No 455
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.51 E-value=1.4 Score=40.62 Aligned_cols=95 Identities=21% Similarity=0.240 Sum_probs=58.2
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccc----cCCC
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE----DLPE 213 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~----~~~~ 213 (284)
..++++|++||-.|+ +.|.-+..++..+. ..++++++.++++.+.++ .+|.+. ++..+...+. ...+
T Consensus 247 ~l~~~~g~~VLDl~a--g~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~ 324 (434)
T PRK14901 247 LLDPQPGEVILDACA--APGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRG 324 (434)
T ss_pred HhCCCCcCEEEEeCC--CCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccc
Confidence 456788999988874 23334444555432 358999999999887764 455443 2332222222 1134
Q ss_pred cccEEE-e--CCC--C--------------------------cHHHHHhhccCCEEEEE
Q 023273 214 KFDVVF-D--AVG--Q--------------------------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 214 ~~d~vi-d--~~g--~--------------------------~~~~~~~l~~~G~~v~~ 241 (284)
.||.|+ | |+| . +..+++.|+++|+++..
T Consensus 325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 699876 4 444 1 13578899999999854
No 456
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.48 E-value=0.31 Score=40.72 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~ 184 (284)
++++++|+|++|++|...++.+... |+++++...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcC
Confidence 4678999999999999999888885 888877543
No 457
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.48 E-value=1.1 Score=41.14 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=59.2
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHh-cCCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccc-cCCCccc
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE-DLPEKFD 216 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~-~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~-~~~~~~d 216 (284)
..++++|++||-.++ +.|.-++.++..+ .+.+|++++.++++++.++ ..|... ++..+...+. ...+.||
T Consensus 232 ~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l~~~~~~~fD 309 (431)
T PRK14903 232 LMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERLTEYVQDTFD 309 (431)
T ss_pred HhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhhhhhhhccCC
Confidence 457789999988873 2333444444443 2468999999999988775 345432 2222222222 1235699
Q ss_pred EEEe---CCC--C--------------------------cHHHHHhhccCCEEEEEc
Q 023273 217 VVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 217 ~vid---~~g--~--------------------------~~~~~~~l~~~G~~v~~g 242 (284)
.|+- |+| . +..+++.|+++|+++...
T Consensus 310 ~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 366 (431)
T PRK14903 310 RILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST 366 (431)
T ss_pred EEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8873 333 1 125788999999987554
No 458
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.46 E-value=0.53 Score=39.10 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (284)
.+.+++|+|++|.+|...+..+... |++|+++.++++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~-G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQ-GANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCch
Confidence 4578999999999999999998884 999987777544
No 459
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.46 E-value=1.6 Score=37.35 Aligned_cols=95 Identities=20% Similarity=0.236 Sum_probs=57.3
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHhc-CCeEEEEeCChhhHHHHH----HcCCcE--EeeCCCcccccCCCcccE
Q 023273 145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDV 217 (284)
Q Consensus 145 ~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d~ 217 (284)
...+++|++||-.++ | .|..++.++..+. ...|+.++.++++.+.++ ..+... ++..+...+....+.+|.
T Consensus 66 ~l~~~~g~~VLDl~a-g-~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~ 143 (264)
T TIGR00446 66 ALEPDPPERVLDMAA-A-PGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDA 143 (264)
T ss_pred HhCCCCcCEEEEECC-C-chHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCE
Confidence 346789999988874 3 3444444454432 248999999999987774 345432 222222222222345998
Q ss_pred EEe---CCCC----------------------------cHHHHHhhccCCEEEEE
Q 023273 218 VFD---AVGQ----------------------------CDKALKAVKEGGRVVSI 241 (284)
Q Consensus 218 vid---~~g~----------------------------~~~~~~~l~~~G~~v~~ 241 (284)
||- |+|. +..++++|+++|+++..
T Consensus 144 Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 144 ILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred EEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 863 3441 13577889999999744
No 460
>PLN02206 UDP-glucuronate decarboxylase
Probab=93.46 E-value=0.31 Score=45.01 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=44.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh-hHHHH-HHcCC--cEEeeCCCcccccCCCcccEEEeCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLL-RSLGA--DLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~-~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
..+++|+|+|++|-+|...++.+... |.+|+++++... +.+.. ..+.. -..++. +.......++|+||.+++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~-G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~--D~~~~~l~~~D~ViHlAa 192 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMAR-GDSVIVVDNFFTGRKENVMHHFSNPNFELIRH--DVVEPILLEVDQIYHLAC 192 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHC-cCEEEEEeCCCccchhhhhhhccCCceEEEEC--CccChhhcCCCEEEEeee
Confidence 35689999999999999999998884 999998875321 11111 11111 112211 112222357999999875
No 461
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=93.44 E-value=0.39 Score=40.60 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=58.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHh--cCCeEEEEeCChhhHHHHHHc----CCcEEeeCCCcccccC-CCcccEEEe
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDL-PEKFDVVFD 220 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~--~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~-~~~~d~vid 220 (284)
+.++.+||-+|+ | .|..+..+++.. .+.+++.++.+++-++.+++. +...-++....+..+. ...+|+++.
T Consensus 54 ~~~~~~vLDlGc-G-tG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~vv~ 131 (247)
T PRK15451 54 VQPGTQVYDLGC-S-LGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVL 131 (247)
T ss_pred CCCCCEEEEEcc-c-CCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCCCCCCCEEeh
Confidence 568899999994 3 366666666531 368999999999988777542 2111111111111111 235788775
Q ss_pred CCC----C-------cHHHHHhhccCCEEEEEcC
Q 023273 221 AVG----Q-------CDKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 221 ~~g----~-------~~~~~~~l~~~G~~v~~g~ 243 (284)
+.. . ++.+.+.|+++|.+++...
T Consensus 132 ~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~ 165 (247)
T PRK15451 132 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 165 (247)
T ss_pred hhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 432 1 2678899999999998764
No 462
>PRK04457 spermidine synthase; Provisional
Probab=93.44 E-value=0.82 Score=39.06 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CC----c--EEeeCCCcc-cccCCCcccEEE-
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA----D--LAIDYTKEN-IEDLPEKFDVVF- 219 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~----~--~~~~~~~~~-~~~~~~~~d~vi- 219 (284)
.+..+||++|+ +.|..+..+++...+.++++++.+++-.+.+++. +. . +++..+... +....+.+|+|+
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~ 142 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILV 142 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEE
Confidence 45678999993 3466777777765568999999999999888763 21 1 222222111 222345799876
Q ss_pred eCCC-C-----------cHHHHHhhccCCEEEE
Q 023273 220 DAVG-Q-----------CDKALKAVKEGGRVVS 240 (284)
Q Consensus 220 d~~g-~-----------~~~~~~~l~~~G~~v~ 240 (284)
|... . ++.+.++|+++|.++.
T Consensus 143 D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 143 DGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred eCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 4322 1 2678889999999986
No 463
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.44 E-value=0.31 Score=42.34 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCe-EEEEeCCh---hhHHHH-HHcC---Cc-EE--eeCCC-cccccCCCccc
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST---AKLDLL-RSLG---AD-LA--IDYTK-ENIEDLPEKFD 216 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~-vi~~~~~~---~~~~~~-~~~g---~~-~~--~~~~~-~~~~~~~~~~d 216 (284)
..+++++|+| +|++|.+++..+... |++ ++++.+++ ++.+.+ +++. .. .+ .+..+ +.+...-..+|
T Consensus 124 ~~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSD 201 (289)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCC
Confidence 3578999999 589999988777664 775 88888875 444333 2232 11 11 22211 11222234679
Q ss_pred EEEeCCCC---c--H---H-HHHhhccCCEEEEEcC
Q 023273 217 VVFDAVGQ---C--D---K-ALKAVKEGGRVVSIIG 243 (284)
Q Consensus 217 ~vid~~g~---~--~---~-~~~~l~~~G~~v~~g~ 243 (284)
++|+|+.. + . . ....+++...++.+-.
T Consensus 202 ilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY 237 (289)
T PRK12548 202 ILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY 237 (289)
T ss_pred EEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence 99998741 1 1 1 2345666666655543
No 464
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.56 Score=39.53 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
.+.+++|+|++|++|...++.+... |++++++.+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~-g~~v~~~~~~ 42 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH-GFDVAVHYNR 42 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4678999999999999988877774 8888877653
No 465
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.44 E-value=0.52 Score=43.54 Aligned_cols=70 Identities=30% Similarity=0.474 Sum_probs=46.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh-hhH----HHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKL----DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~-~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~ 224 (284)
.+++++|+| .|.+|+.++..+... |++|++.+..+ +.. +.+...+.........+ ...+++|+|+.++|.
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch---hHhhcCCEEEECCCC
Confidence 478999999 666999999888884 99999998864 222 22334454322211111 223579999998883
No 466
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.43 E-value=0.7 Score=39.88 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=65.6
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
..||+.......++..++ -.|++++|+|.+..+|.-.+.++... ++.|.++....+. +.
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs~T~~-------------------l~ 202 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHVFTDD-------------------LK 202 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEeccCCC-------------------HH
Confidence 456665555555555554 48999999998888999999999884 8888777643221 22
Q ss_pred cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (284)
+..+..|+++.++|-++ ---+.++++..++.+|..
T Consensus 203 ~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin 238 (287)
T PRK14176 203 KYTLDADILVVATGVKHLIKADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHhhCCEEEEccCCccccCHHHcCCCcEEEEeccc
Confidence 23467899999998642 233578888888888763
No 467
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.39 E-value=0.65 Score=40.05 Aligned_cols=95 Identities=23% Similarity=0.272 Sum_probs=64.9
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
..||+.......++..++ -.|.+++|+|.+..+|.-.+.++... +++|+++.... .++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs~t-------------------~~l~ 196 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHSKT-------------------RDLA 196 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecCCC-------------------CCHH
Confidence 346555444444554443 47999999998777799999999884 88888754321 1233
Q ss_pred cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCCC
Q 023273 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV 245 (284)
Q Consensus 210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~~ 245 (284)
+..+..|+++.++|.++ ---+.++++..++.+|...
T Consensus 197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR 233 (285)
T ss_pred HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence 33467899999998631 1227889998888888653
No 468
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.37 E-value=0.4 Score=40.16 Aligned_cols=36 Identities=28% Similarity=0.401 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCCh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~ 186 (284)
.+++++|+|++|.+|...++..... |.++++++++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~-G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA-GAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecch
Confidence 5689999999999999999888774 99999998865
No 469
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=93.37 E-value=0.65 Score=43.91 Aligned_cols=85 Identities=25% Similarity=0.413 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----- 224 (284)
.|++|.|+| .|.+|...++.++. +|.+|++.++... .+...+++... . +++.+.....|+|+-+...
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~-fG~~V~~~d~~~~-~~~~~~~g~~~-~----~~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKA-FGMKVLAYDPYIS-PERAEQLGVEL-V----DDLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCC-hhHHHhcCCEE-c----CCHHHHHhhCCEEEEccCCChhhc
Confidence 578999999 99999999999998 5999999987422 22334455321 1 1234445678998877652
Q ss_pred --c-HHHHHhhccCCEEEEEc
Q 023273 225 --C-DKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 --~-~~~~~~l~~~G~~v~~g 242 (284)
. ...+..|+++..+|.++
T Consensus 209 ~li~~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCA 229 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcC
Confidence 1 56788899988888775
No 470
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.35 E-value=0.26 Score=41.04 Aligned_cols=42 Identities=21% Similarity=0.335 Sum_probs=34.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~ 192 (284)
.+.+++|+|++|++|...+..+... |++|+++++++++.+..
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~ 47 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAV 47 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 4678999999999999988887774 89999999987765443
No 471
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.34 E-value=0.81 Score=40.01 Aligned_cols=82 Identities=30% Similarity=0.355 Sum_probs=57.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC----
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---- 224 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~---- 224 (284)
-.|++|.|+| .|.+|...++.++. +|++|++.+++... .+..... .++.+.....|+++.+...
T Consensus 120 L~gktvgIiG-~G~IG~~vA~~l~a-fG~~V~~~~r~~~~------~~~~~~~----~~l~ell~~aDiv~~~lp~t~~T 187 (303)
T PRK06436 120 LYNKSLGILG-YGGIGRRVALLAKA-FGMNIYAYTRSYVN------DGISSIY----MEPEDIMKKSDFVLISLPLTDET 187 (303)
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHH-CCCEEEEECCCCcc------cCccccc----CCHHHHHhhCCEEEECCCCCchh
Confidence 3589999999 99999999999998 49999999876321 1211111 1233445678988887652
Q ss_pred ----cHHHHHhhccCCEEEEEc
Q 023273 225 ----CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 ----~~~~~~~l~~~G~~v~~g 242 (284)
....+..|+++..+|.++
T Consensus 188 ~~li~~~~l~~mk~ga~lIN~s 209 (303)
T PRK06436 188 RGMINSKMLSLFRKGLAIINVA 209 (303)
T ss_pred hcCcCHHHHhcCCCCeEEEECC
Confidence 156788888888777665
No 472
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.33 E-value=1 Score=39.63 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=57.7
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHH-hcCCeEEEEeCChhhHHHHH-Hc---CCcEEeeCCCcccccCCCcccEEEe
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLR-SL---GADLAIDYTKENIEDLPEKFDVVFD 220 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~-~~g~~vi~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~d~vid 220 (284)
.......+++|+| +|.+|.+.+..... .+..++.+..+++++.+.+. ++ +..... . .+..+.-.+.|+|+.
T Consensus 120 La~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~ 195 (314)
T PRK06141 120 LARKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISC 195 (314)
T ss_pred hCCCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEE
Confidence 3345678999999 89999998864443 23467889999988866553 33 311111 1 112223468999999
Q ss_pred CCCCcHH--HHHhhccCCEEEEEcC
Q 023273 221 AVGQCDK--ALKAVKEGGRVVSIIG 243 (284)
Q Consensus 221 ~~g~~~~--~~~~l~~~G~~v~~g~ 243 (284)
++.+..- --+.++++-.+..+|.
T Consensus 196 aT~s~~pvl~~~~l~~g~~i~~ig~ 220 (314)
T PRK06141 196 ATLSTEPLVRGEWLKPGTHLDLVGN 220 (314)
T ss_pred eeCCCCCEecHHHcCCCCEEEeeCC
Confidence 8875321 1256777665544443
No 473
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.32 E-value=0.22 Score=41.76 Aligned_cols=42 Identities=29% Similarity=0.378 Sum_probs=34.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
+.++||+|++|.+|...+...... |.+|+++++++++.+.+.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~~ 42 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAAA 42 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 357999999999999999888774 889999999877665553
No 474
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.32 E-value=0.16 Score=45.61 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEE-eeCCC-cccccCCCcccEEEeCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~d~vid~~g 223 (284)
..+++|+|+|++|-+|...+..+... |.+|+++++..........+..... .|-.+ ..+.....++|+||++++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~-G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAE-GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhC-CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 46789999999999999999999884 9999999875322110001111111 11111 112222357899999874
No 475
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=93.29 E-value=0.31 Score=40.47 Aligned_cols=103 Identities=20% Similarity=0.323 Sum_probs=65.4
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH--cC------CcEEeeCCC-cccc
Q 023273 139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS--LG------ADLAIDYTK-ENIE 209 (284)
Q Consensus 139 a~~al~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~--~g------~~~~~~~~~-~~~~ 209 (284)
+..=+...+++.|++||-+ |+++|..|+..++. ++.+|+.+..++.-+++++- +. +-.++.-+. +-.+
T Consensus 123 t~~Kv~~V~~~~G~rVLDt--C~GLGYtAi~a~~r-GA~~VitvEkdp~VLeLa~lNPwSr~l~~~~i~iilGD~~e~V~ 199 (287)
T COG2521 123 TLAKVELVKVKRGERVLDT--CTGLGYTAIEALER-GAIHVITVEKDPNVLELAKLNPWSRELFEIAIKIILGDAYEVVK 199 (287)
T ss_pred HHhhhheeccccCCEeeee--ccCccHHHHHHHHc-CCcEEEEEeeCCCeEEeeccCCCCccccccccEEecccHHHHHh
Confidence 4333445677889999886 89999999999987 45588888877765554421 11 111221111 1122
Q ss_pred cC-CCcccEEEe------CCCC------cHHHHHhhccCCEEEEEcCC
Q 023273 210 DL-PEKFDVVFD------AVGQ------CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 210 ~~-~~~~d~vid------~~g~------~~~~~~~l~~~G~~v~~g~~ 244 (284)
+. .+.||++|. -+|. +.+..+.|+++|++..+-+.
T Consensus 200 ~~~D~sfDaIiHDPPRfS~AgeLYseefY~El~RiLkrgGrlFHYvG~ 247 (287)
T COG2521 200 DFDDESFDAIIHDPPRFSLAGELYSEEFYRELYRILKRGGRLFHYVGN 247 (287)
T ss_pred cCCccccceEeeCCCccchhhhHhHHHHHHHHHHHcCcCCcEEEEeCC
Confidence 22 345888874 2343 27899999999999987443
No 476
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.28 E-value=0.53 Score=43.42 Aligned_cols=44 Identities=25% Similarity=0.509 Sum_probs=35.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhH-HHHHHcCC
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGA 197 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~-~~~~~~g~ 197 (284)
+|.|+|+.|.+|.+.+..++.. |.+|++.++++++. +.+.+.|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCC
Confidence 6889987899999999988884 88999999887774 44556664
No 477
>PLN02214 cinnamoyl-CoA reductase
Probab=93.27 E-value=0.3 Score=43.40 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=47.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHH--HHHHcC---C-cEEeeCC---CcccccCCCcccEEE
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD--LLRSLG---A-DLAIDYT---KENIEDLPEKFDVVF 219 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~--~~~~~g---~-~~~~~~~---~~~~~~~~~~~d~vi 219 (284)
..+++|+|+|++|.+|...+..+... |.+|++++++.++.. ..+.+. . ..++..+ ...+.+.-+++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 35679999999999999998888874 899999988765422 122221 1 1122111 112223345799999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 87 h~A~ 90 (342)
T PLN02214 87 HTAS 90 (342)
T ss_pred EecC
Confidence 9986
No 478
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.24 E-value=0.79 Score=39.55 Aligned_cols=94 Identities=20% Similarity=0.180 Sum_probs=66.2
Q ss_pred cccchHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccc
Q 023273 131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (284)
..||+....+..++..++ -.|++++|+|.+..+|.-.+.++... ++.|+++-+... ++.
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~T~-------------------~l~ 197 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRFTK-------------------NLR 197 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECCCC-------------------CHH
Confidence 346666555556655544 46999999997777999999999884 888887765322 122
Q ss_pred cCCCcccEEEeCCCCcH-HHHHhhccCCEEEEEcCC
Q 023273 210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 210 ~~~~~~d~vid~~g~~~-~~~~~l~~~G~~v~~g~~ 244 (284)
+..+..|+++.++|.++ -.-+.++++..++.+|..
T Consensus 198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin 233 (285)
T PRK10792 198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccc
Confidence 33467899999999642 223678888888888844
No 479
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.22 E-value=0.46 Score=39.74 Aligned_cols=42 Identities=26% Similarity=0.423 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHH
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL 192 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~ 192 (284)
.+.+++|+|++|++|...+...... |+++++..+ ++++.+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~-G~~vv~~~~~~~~~~~~~ 46 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE-GARVVVNYHQSEDAAEAL 46 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHH
Confidence 3578999999999999988887774 889887654 44444333
No 480
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.19 E-value=0.57 Score=40.86 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCC
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~ 185 (284)
.+.+++|+|+++++|...++..... |++|++.++.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~-Ga~Vv~~~~~ 45 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARL-GATVVVNDVA 45 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCC
Confidence 5789999999999999988877774 8999988764
No 481
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=93.19 E-value=1.7 Score=34.53 Aligned_cols=90 Identities=23% Similarity=0.290 Sum_probs=56.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCcccccCCCcccEEEeC
Q 023273 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 147 ~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~d~vid~ 221 (284)
...++++|+-+|+ +.|..+..+++. +.+++.++.+++..+.+++ .+.. .++..+. .....+.+|+|+.+
T Consensus 16 ~~~~~~~vLdlG~--G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~--~~~~~~~fD~Vi~n 89 (179)
T TIGR00537 16 RELKPDDVLEIGA--GTGLVAIRLKGK--GKCILTTDINPFAVKELRENAKLNNVGLDVVMTDL--FKGVRGKFDVILFN 89 (179)
T ss_pred HhcCCCeEEEeCC--ChhHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccc--ccccCCcccEEEEC
Confidence 3455678999883 556666677765 3489999999988777654 2221 2222221 11123478988754
Q ss_pred CC-----------------------C-------cHHHHHhhccCCEEEEEc
Q 023273 222 VG-----------------------Q-------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 222 ~g-----------------------~-------~~~~~~~l~~~G~~v~~g 242 (284)
.. + .+.+.+.|+++|+++++.
T Consensus 90 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~ 140 (179)
T TIGR00537 90 PPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ 140 (179)
T ss_pred CCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence 21 0 245678999999998775
No 482
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.15 E-value=0.64 Score=40.05 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=46.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g 223 (284)
+|.|+| .|.+|...+..++.. |.+|++.++++++.+.+.+.|....... +.. .....|+||-|+.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~~~---~~~-~~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEAST---DLS-LLKDCDLVILALP 66 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCcccccC---CHh-HhcCCCEEEEcCC
Confidence 688999 899999888877774 8899999999998888877764211111 111 2356788888776
No 483
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=93.13 E-value=0.83 Score=40.27 Aligned_cols=86 Identities=22% Similarity=0.306 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCC-C---
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q--- 224 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g-~--- 224 (284)
..|++|.|+| .|.+|...++-++. +++.+....+...+.+...+.++. ..++.+.....|+++-|.. +
T Consensus 160 ~~gK~vgilG-~G~IG~~ia~rL~~-Fg~~i~y~~r~~~~~~~~~~~~~~------~~d~~~~~~~sD~ivv~~pLt~~T 231 (336)
T KOG0069|consen 160 LEGKTVGILG-LGRIGKAIAKRLKP-FGCVILYHSRTQLPPEEAYEYYAE------FVDIEELLANSDVIVVNCPLTKET 231 (336)
T ss_pred ccCCEEEEec-CcHHHHHHHHhhhh-ccceeeeecccCCchhhHHHhccc------ccCHHHHHhhCCEEEEecCCCHHH
Confidence 3588999999 89999999999999 686566666666666666665554 2334555667888765543 2
Q ss_pred --c--HHHHHhhccCCEEEEEc
Q 023273 225 --C--DKALKAVKEGGRVVSII 242 (284)
Q Consensus 225 --~--~~~~~~l~~~G~~v~~g 242 (284)
. ...+..|++++.+|-++
T Consensus 232 ~~liNk~~~~~mk~g~vlVN~a 253 (336)
T KOG0069|consen 232 RHLINKKFIEKMKDGAVLVNTA 253 (336)
T ss_pred HHHhhHHHHHhcCCCeEEEecc
Confidence 1 68999999999998775
No 484
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.12 E-value=1.6 Score=40.06 Aligned_cols=97 Identities=21% Similarity=0.150 Sum_probs=59.6
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH----HcCCc-EE--eeCCCccccc--CCCc
Q 023273 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LA--IDYTKENIED--LPEK 214 (284)
Q Consensus 144 ~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~~~--~~~~ 214 (284)
....+.+|++||-+|+ +.|..+..+++.+++.++++++.++++++.++ .+|.. .+ .+.+...... ..+.
T Consensus 232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~ 309 (426)
T TIGR00563 232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ 309 (426)
T ss_pred HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence 4456789999998874 33444555555543478999999999887664 35543 22 2211111111 1346
Q ss_pred ccEEEe---CCC--Cc--------------------------HHHHHhhccCCEEEEEc
Q 023273 215 FDVVFD---AVG--QC--------------------------DKALKAVKEGGRVVSII 242 (284)
Q Consensus 215 ~d~vid---~~g--~~--------------------------~~~~~~l~~~G~~v~~g 242 (284)
||.||- |+| .. ..+++.|+++|+++...
T Consensus 310 fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst 368 (426)
T TIGR00563 310 FDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT 368 (426)
T ss_pred cCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 998863 444 11 24788899999998653
No 485
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.12 E-value=0.46 Score=41.97 Aligned_cols=74 Identities=23% Similarity=0.325 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHH---HHc---CCcEEeeC--CC-cccccCCCcccEEE
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL---GADLAIDY--TK-ENIEDLPEKFDVVF 219 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~---~~~---g~~~~~~~--~~-~~~~~~~~~~d~vi 219 (284)
..+.+|+|+|++|.+|...+..+... |.+|+++.++.++.... ..+ +.-.++.- .+ +.+.+.-+++|.||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 34789999999999999999988884 89998888765443322 111 11122221 11 12223335789999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
.+++
T Consensus 86 h~A~ 89 (338)
T PLN00198 86 HVAT 89 (338)
T ss_pred EeCC
Confidence 9876
No 486
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=93.12 E-value=1.1 Score=38.52 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhc---CCeEEEEeCChhhHHHHHHcCCc-EEeeCCCcccccCCCcccEEEeCCC-
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVF---GASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG- 223 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~---g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~d~vid~~g- 223 (284)
.+.++||-+|+ +.|..+..+++... +..++.++.+++-.+.+++.... ..+..+...++-..+.+|+|+....
T Consensus 84 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~~lp~~~~sfD~I~~~~~~ 161 (272)
T PRK11088 84 EKATALLDIGC--GEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSHRLPFADQSLDAIIRIYAP 161 (272)
T ss_pred CCCCeEEEECC--cCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeecccCCCcCCceeEEEEecCC
Confidence 35578888883 45666666666531 24789999999888888654321 2222221222222356999987643
Q ss_pred -CcHHHHHhhccCCEEEEEc
Q 023273 224 -QCDKALKAVKEGGRVVSII 242 (284)
Q Consensus 224 -~~~~~~~~l~~~G~~v~~g 242 (284)
....+.+.|+++|+++.+.
T Consensus 162 ~~~~e~~rvLkpgG~li~~~ 181 (272)
T PRK11088 162 CKAEELARVVKPGGIVITVT 181 (272)
T ss_pred CCHHHHHhhccCCCEEEEEe
Confidence 2578899999999999874
No 487
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.09 E-value=0.62 Score=38.62 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=30.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhH
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKL 189 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~ 189 (284)
+++||+|++|++|...++.+... |++++++.+ ++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~ 38 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD-GYRVAANCGPNEERA 38 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHH
Confidence 46899999999999988888874 899988887 44433
No 488
>PLN02686 cinnamoyl-CoA reductase
Probab=93.09 E-value=0.38 Score=43.24 Aligned_cols=45 Identities=20% Similarity=0.229 Sum_probs=36.0
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHH
Q 023273 148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193 (284)
Q Consensus 148 ~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~ 193 (284)
...+++|||+|++|.+|...+..+... |.+|+++.++.++.+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 355789999999999999999988874 999988887766554443
No 489
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=93.08 E-value=0.39 Score=40.55 Aligned_cols=89 Identities=25% Similarity=0.344 Sum_probs=62.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCC---------cEEeeCCCcccccCCCcccEEEeC
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---------DLAIDYTKENIEDLPEKFDVVFDA 221 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~~~~~d~vid~ 221 (284)
|.+||-+| | +-|++..-+|+. |+.|..++.+++..+.+++.-. .+.+++...+.+...+.||.|+..
T Consensus 90 g~~ilDvG-C-GgGLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcs 165 (282)
T KOG1270|consen 90 GMKILDVG-C-GGGLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCS 165 (282)
T ss_pred CceEEEec-c-CccccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeH
Confidence 47888888 3 348899999996 8999999999998888865321 112444444444555669988754
Q ss_pred -----CCCc----HHHHHhhccCCEEEEEcC
Q 023273 222 -----VGQC----DKALKAVKEGGRVVSIIG 243 (284)
Q Consensus 222 -----~g~~----~~~~~~l~~~G~~v~~g~ 243 (284)
+-++ +.+++.|+|+|++++...
T Consensus 166 evleHV~dp~~~l~~l~~~lkP~G~lfitti 196 (282)
T KOG1270|consen 166 EVLEHVKDPQEFLNCLSALLKPNGRLFITTI 196 (282)
T ss_pred HHHHHHhCHHHHHHHHHHHhCCCCceEeeeh
Confidence 2232 678899999999987643
No 490
>PRK00536 speE spermidine synthase; Provisional
Probab=93.06 E-value=0.55 Score=40.05 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHcCCc--EEeeCCC----cccccC-CCcccEEE-e
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTK----ENIEDL-PEKFDVVF-D 220 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~----~~~~~~-~~~~d~vi-d 220 (284)
...++|||+| |+=|.++-+++|+ . .+|..++.+++-.+.++++-+. ..++... ..+.+. .+.+|+|| |
T Consensus 71 ~~pk~VLIiG--GGDGg~~REvLkh-~-~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 71 KELKEVLIVD--GFDLELAHQLFKY-D-THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCCeEEEEc--CCchHHHHHHHCc-C-CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEc
Confidence 4458999998 5667788899998 3 4899999999888888773321 0011000 011121 35799876 5
Q ss_pred CCCC---cHHHHHhhccCCEEEEEcCC
Q 023273 221 AVGQ---CDKALKAVKEGGRVVSIIGS 244 (284)
Q Consensus 221 ~~g~---~~~~~~~l~~~G~~v~~g~~ 244 (284)
.+-+ ++.+.++|+++|.++.=+++
T Consensus 147 s~~~~~fy~~~~~~L~~~Gi~v~Qs~s 173 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_pred CCCChHHHHHHHHhcCCCcEEEECCCC
Confidence 3332 37899999999999976554
No 491
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.04 E-value=1.1 Score=39.10 Aligned_cols=87 Identities=14% Similarity=0.206 Sum_probs=53.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHHc-CCcEEeeCCCc-------ccccCCCcccEEEeCCC
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADLAIDYTKE-------NIEDLPEKFDVVFDAVG 223 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~~-------~~~~~~~~~d~vid~~g 223 (284)
.+|+|+| +|++|...+..+... |.+|..+.++.++.+.+++- |.. +.+.... ......+.+|++|-|+-
T Consensus 3 m~I~IiG-aGaiG~~~a~~L~~~-G~~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILG-AGSLGSLWACRLARA-GLPVRLILRDRQRLAAYQQAGGLT-LVEQGQASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEechHHHHHHhhcCCeE-EeeCCcceeeccCCCCcccccccCEEEEECC
Confidence 4799999 899997655555553 88999999988777777643 321 1111100 00111347899998875
Q ss_pred Cc------HHHHHhhccCCEEEEE
Q 023273 224 QC------DKALKAVKEGGRVVSI 241 (284)
Q Consensus 224 ~~------~~~~~~l~~~G~~v~~ 241 (284)
++ ..+...+.++..++.+
T Consensus 80 ~~~~~~al~~l~~~l~~~t~vv~l 103 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPGAELLLL 103 (305)
T ss_pred HHhHHHHHHHHHhhCCCCCEEEEE
Confidence 42 3344455667766665
No 492
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.02 E-value=0.79 Score=39.75 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh---hHHHH-HHcCCc-----EEeeCCCc-ccccCCCcccEEE
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGAD-----LAIDYTKE-NIEDLPEKFDVVF 219 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~---~~~~~-~~~g~~-----~~~~~~~~-~~~~~~~~~d~vi 219 (284)
.+++++|+| +|+.+.+++..+...+..+++++.++++ |.+.+ +.++.. .+...... .+......+|+++
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 567999999 6888888666555542347888888743 44433 333211 11111110 1122235789999
Q ss_pred eCCC
Q 023273 220 DAVG 223 (284)
Q Consensus 220 d~~g 223 (284)
+|+.
T Consensus 202 NaTp 205 (288)
T PRK12749 202 NGTK 205 (288)
T ss_pred ECCC
Confidence 9874
No 493
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=92.99 E-value=0.73 Score=40.67 Aligned_cols=103 Identities=19% Similarity=0.257 Sum_probs=64.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeC-ChhhHHHHHHcCCcEEeeCCCcccccCCCcccEEEeCCCC-----
Q 023273 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----- 224 (284)
Q Consensus 151 g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~vid~~g~----- 224 (284)
|++|-|+| .|.+|..+++.++. +|.+|++.++ .++.... ..+.. ..+.+.+.....|++...+.-
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~a-fgm~v~~~d~~~~~~~~~--~~~~~-----~~~~Ld~lL~~sDiv~lh~PlT~eT~ 212 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKA-FGMKVIGYDPYSPRERAG--VDGVV-----GVDSLDELLAEADILTLHLPLTPETR 212 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CCCeEEEECCCCchhhhc--cccce-----ecccHHHHHhhCCEEEEcCCCCcchh
Confidence 88999999 99999999999999 5999999998 3322221 11110 011233344556776655431
Q ss_pred ---cHHHHHhhccCCEEEEEcCCCCCCceeEEEeccHHHHHHHHHHHHCCCee
Q 023273 225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK 274 (284)
Q Consensus 225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 274 (284)
-...+..|+++..+|-++--. -=+-+.+++.+++|+|.
T Consensus 213 g~i~~~~~a~MK~gailIN~aRG~------------vVde~aL~~AL~~G~i~ 253 (324)
T COG0111 213 GLINAEELAKMKPGAILINAARGG------------VVDEDALLAALDSGKIA 253 (324)
T ss_pred cccCHHHHhhCCCCeEEEECCCcc------------eecHHHHHHHHHcCCcc
Confidence 157777888777666554111 11334566667777765
No 494
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.94 E-value=0.28 Score=40.96 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=30.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhh
Q 023273 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188 (284)
Q Consensus 152 ~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~ 188 (284)
.+++|+|++|++|...++..... |+++++++++.++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~-G~~v~~~~r~~~~ 37 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQP-GIAVLGVARSRHP 37 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhC-CCEEEEEecCcch
Confidence 37999999999999999888774 9999999886554
No 495
>PRK03612 spermidine synthase; Provisional
Probab=92.93 E-value=0.46 Score=44.85 Aligned_cols=91 Identities=22% Similarity=0.265 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHhcC-CeEEEEeCChhhHHHHHHcC------------C-cEEeeCCCcc-cccCCC
Q 023273 149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG------------A-DLAIDYTKEN-IEDLPE 213 (284)
Q Consensus 149 ~~g~~vlI~ga~g~~G~~a~~~a~~~~g-~~vi~~~~~~~~~~~~~~~g------------~-~~~~~~~~~~-~~~~~~ 213 (284)
++.++||++|+ +.|..+.++++. .. .++++++.+++-.+.+++.- + .+++..+... .....+
T Consensus 296 ~~~~rVL~IG~--G~G~~~~~ll~~-~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~ 372 (521)
T PRK03612 296 ARPRRVLVLGG--GDGLALREVLKY-PDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAE 372 (521)
T ss_pred CCCCeEEEEcC--CccHHHHHHHhC-CCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCC
Confidence 45678999984 456677777775 45 69999999999888887621 0 0122221111 122246
Q ss_pred cccEEEeCCCC--------------cHHHHHhhccCCEEEEEc
Q 023273 214 KFDVVFDAVGQ--------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 214 ~~d~vid~~g~--------------~~~~~~~l~~~G~~v~~g 242 (284)
.+|+|+..... .+.+.++|+++|.++.-.
T Consensus 373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 89998743221 157788999999998654
No 496
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=92.88 E-value=1.9 Score=39.59 Aligned_cols=98 Identities=19% Similarity=0.211 Sum_probs=60.0
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH----cCCc-EEeeCCCccccc-C-CCcc
Q 023273 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIED-L-PEKF 215 (284)
Q Consensus 143 l~~~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~-~-~~~~ 215 (284)
....++.+|++||-+|+ +.|..+..++....+.+++.++.++++.+.+++ .|.. .++..+...... . .+.+
T Consensus 237 ~~~l~~~~g~~VLDlga--G~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~~~~~~f 314 (427)
T PRK10901 237 ATLLAPQNGERVLDACA--APGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARDPAQWWDGQPF 314 (427)
T ss_pred HHHcCCCCCCEEEEeCC--CCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhhcccCCC
Confidence 34556789999999874 334445566665324689999999998877743 4432 233322221111 1 3469
Q ss_pred cEEE-e--CCCC----------------------------cHHHHHhhccCCEEEEEc
Q 023273 216 DVVF-D--AVGQ----------------------------CDKALKAVKEGGRVVSII 242 (284)
Q Consensus 216 d~vi-d--~~g~----------------------------~~~~~~~l~~~G~~v~~g 242 (284)
|.|+ | |+|. +..+++.|+++|+++...
T Consensus 315 D~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 315 DRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred CEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 9887 2 3331 136778899999998544
No 497
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.87 E-value=1.4 Score=38.36 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=64.2
Q ss_pred cccchHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEe-CChhhHHHHHHcCCcEEeeCCCccc
Q 023273 131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI 208 (284)
Q Consensus 131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (284)
.+||+....+..++..+ --.|++|+|+|.++.+|.-.+.++... |+.|+++. ++.+ .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~~--------------------l 195 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTRD--------------------L 195 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCCC--------------------H
Confidence 35666544555555444 357999999999999999999888874 89888884 3321 1
Q ss_pred ccCCCcccEEEeCCCCcHHHHH-hhccCCEEEEEcCCC
Q 023273 209 EDLPEKFDVVFDAVGQCDKALK-AVKEGGRVVSIIGSV 245 (284)
Q Consensus 209 ~~~~~~~d~vid~~g~~~~~~~-~l~~~G~~v~~g~~~ 245 (284)
.+..+..|+++.++|..+..-. .++++..++.+|...
T Consensus 196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR 233 (296)
T ss_pred HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence 2223568999999987533222 377888888887643
No 498
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.85 E-value=0.73 Score=38.20 Aligned_cols=37 Identities=30% Similarity=0.395 Sum_probs=30.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChh
Q 023273 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187 (284)
Q Consensus 150 ~g~~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~ 187 (284)
+.+++||+|++|.+|...+..+... |.+++++.++.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~-g~~v~~~~~~~~ 41 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARA-GADVVVHYRSDE 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCCH
Confidence 4568999999999999999988874 888877666443
No 499
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]
Probab=92.83 E-value=1.7 Score=36.67 Aligned_cols=100 Identities=20% Similarity=0.246 Sum_probs=63.3
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHhcC------CeEEEEeCChhhHHHHHHc----C--Cc---EEeeCCCccccc
Q 023273 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRSL----G--AD---LAIDYTKENIED 210 (284)
Q Consensus 146 ~~~~~g~~vlI~ga~g~~G~~a~~~a~~~~g------~~vi~~~~~~~~~~~~~~~----g--~~---~~~~~~~~~~~~ 210 (284)
.++..++++|-++ |++|-.|-.+.++... .+|++++.+++.++..++. + +. ..+..+.++++-
T Consensus 96 L~p~~~m~~lDva--GGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpF 173 (296)
T KOG1540|consen 96 LGPGKGMKVLDVA--GGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPF 173 (296)
T ss_pred cCCCCCCeEEEec--CCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCCC
Confidence 4556677777664 6667777777776533 6899999999977666432 2 22 112223333332
Q ss_pred CCCcccEEEeCCC-----C----cHHHHHhhccCCEEEEEcCCCCC
Q 023273 211 LPEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGSVTP 247 (284)
Q Consensus 211 ~~~~~d~vid~~g-----~----~~~~~~~l~~~G~~v~~g~~~~~ 247 (284)
-...+|.+--+.| + .+.+.+.|+++|||..+..+..+
T Consensus 174 dd~s~D~yTiafGIRN~th~~k~l~EAYRVLKpGGrf~cLeFskv~ 219 (296)
T KOG1540|consen 174 DDDSFDAYTIAFGIRNVTHIQKALREAYRVLKPGGRFSCLEFSKVE 219 (296)
T ss_pred CCCcceeEEEecceecCCCHHHHHHHHHHhcCCCcEEEEEEccccc
Confidence 1345777655555 2 37899999999999988776533
No 500
>PRK08309 short chain dehydrogenase; Provisional
Probab=92.79 E-value=4.2 Score=32.50 Aligned_cols=129 Identities=19% Similarity=0.245 Sum_probs=70.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHhcCCeEEEEeCChhhHHHHHH-cCC---cEE--eeCCCc-cccc-------CCCcccEE
Q 023273 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGA---DLA--IDYTKE-NIED-------LPEKFDVV 218 (284)
Q Consensus 153 ~vlI~ga~g~~G~~a~~~a~~~~g~~vi~~~~~~~~~~~~~~-~g~---~~~--~~~~~~-~~~~-------~~~~~d~v 218 (284)
+++|+|++| +|...++.... .|++|+++.+++++.+.+.. +.. ... .|..+. .... ..+.+|.+
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~-~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCE-KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHH-CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 689999875 44444444444 38999999998877665543 321 111 132221 1111 13578999
Q ss_pred EeCCCC--cHHHHHhhccCC------EEEEEcCCCCC-C----------c---ee----EEEec-------cHHHHHHHH
Q 023273 219 FDAVGQ--CDKALKAVKEGG------RVVSIIGSVTP-P----------A---SS----FVLTS-------DGSILEKLN 265 (284)
Q Consensus 219 id~~g~--~~~~~~~l~~~G------~~v~~g~~~~~-~----------~---~~----~~~~~-------~~~~~~~~~ 265 (284)
|+.... ++......+..| +++.+-++... . . .. |.... -.|.-+-++
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv~ 159 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDPRIPSEKIGPARCSYRRVILGFVLEDTYSRWLTHEEISDGVI 159 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcCCchhhhhhhhhhcCCceEEEEEeEEEeCCccccCchHHHHHHHH
Confidence 988763 344444444444 46666443321 1 0 01 11111 246778899
Q ss_pred HHHHCCCeeEeecccccC
Q 023273 266 PYFESGKVKAIIDPKGLL 283 (284)
Q Consensus 266 ~~~~~g~i~~~i~~~~~~ 283 (284)
+.++.+.=...+..+=||
T Consensus 160 ~~~~~~~~~~~~g~~~pw 177 (177)
T PRK08309 160 KAIESDADEHVVGTVEPW 177 (177)
T ss_pred HHHhcCCCeEEEEEecCC
Confidence 999887666666555443
Done!