BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023281
         (284 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8RWE8|GGAP1_ARATH GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana GN=VTC2
           PE=1 SV=1
          Length = 442

 Score =  142 bits (359), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 154/311 (49%), Gaps = 43/311 (13%)

Query: 3   RGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPF--------ILNSIDQN--------- 45
           RG FRYDVTA E KVI G   F+AQLNE   +           +L S D +         
Sbjct: 84  RGLFRYDVTACETKVIPGKYGFVAQLNEGRHLKKRPTEFRVDKVLQSFDGSKFNFTKVGQ 143

Query: 46  EELLFCVTRSEKANSELIPSAAV--PNDSILVIINANPIEYGHVFVVP----CGSNRLYP 99
           EELLF     E A  +  P   +   N   +V IN +PIEYGHV ++P    C   R+  
Sbjct: 144 EELLFQFEAGEDAQVQFFPCMPIDPENSPSVVAINVSPIEYGHVLLIPRVLDCLPQRI-- 201

Query: 100 DARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTFFSD 157
           D +S  + V +A E  N  FRL Y+     A+  H++FQA Y     P+E  P     + 
Sbjct: 202 DHKSLLLAVHMAAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPLEKAPTKKITTT 261

Query: 158 GQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIF 217
              G+ IS L+ YP++++LFE   + +  + + +S+ C  L+  NI +N+LISDCG++IF
Sbjct: 262 -VSGVKISELLSYPVRSLLFEGGSSMQE-LSDTVSDCCVCLQNNNIPFNILISDCGRQIF 319

Query: 218 LFLQ----KSAISG----------NLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSL 263
           L  Q    K A+            N   WE  G+ +   K +++  +E+   + L+  SL
Sbjct: 320 LMPQCYAEKQALGEVSPEVLETQVNPAVWEISGHMVLKRKEDYEGASEDNAWRLLAEASL 379

Query: 264 NDEGFQVVKQL 274
           ++E F+ V  L
Sbjct: 380 SEERFKEVTAL 390


>sp|Q9FLP9|GGAP2_ARATH GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana GN=VTC5
           PE=1 SV=1
          Length = 431

 Score =  138 bits (347), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 158/314 (50%), Gaps = 46/314 (14%)

Query: 3   RGCFRYDVTASEIKVISGGKKFLAQLNE-------------KWIMDPFILNSID----QN 45
           RG FRYDVTA E KVI G   F+AQLNE               ++ PF  N  +      
Sbjct: 78  RGLFRYDVTACETKVIPGKYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQ 137

Query: 46  EELLFCVTRS-EKANSELIPSAAVP----NDSILVIINANPIEYGHVFVVP----CGSNR 96
           EELLF    S    +SE+   A++P    N   +V IN +PIEYGHV ++P    C   R
Sbjct: 138 EELLFQFKASTNDDDSEIQFLASMPLDADNSPSVVAINVSPIEYGHVLLIPRVLDCLPQR 197

Query: 97  LYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTF 154
           +  D +S  + +++A E +N  FRL Y+     A+  H++FQA Y     P+E       
Sbjct: 198 I--DHKSLLLALQMAAEADNPYFRLGYNSLGAFATINHLHFQAYYLAMQFPIEKAS-SLK 254

Query: 155 FSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGK 214
            +    G+ IS L++YP++ +L E   N    + + +S+    L+  NI +N+LISD GK
Sbjct: 255 ITTTNNGVKISKLLNYPVRGLLVE-GGNTIKDLADTVSDASVCLQNNNIPFNILISDSGK 313

Query: 215 RIFLFLQ----KSA---ISGNLL-------AWECGGYFLFGSKYEFDQVTEEAIHKRLSA 260
           RIFL  Q    K A   +S  LL        WE  G+ +   K +++  +EE   + L+ 
Sbjct: 314 RIFLLPQCYAEKQALGEVSSTLLDTQVNPAVWEMSGHMVLKRKEDYEGASEEKAWRLLAE 373

Query: 261 VSLNDEGFQVVKQL 274
           VSL++E F+ V  +
Sbjct: 374 VSLSEERFREVNTM 387


>sp|Q3TLS3|GDPP1_MOUSE GDP-D-glucose phosphorylase 1 OS=Mus musculus GN=Gdpgp1 PE=2 SV=2
          Length = 386

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 63/302 (20%)

Query: 2   WR-----GCFRYDVTASEIKVISGGKKFLAQLN-EKWIM--------------DP--FIL 39
           WR     G FRY +   + +++ G   F+AQLN E+ I               DP  F  
Sbjct: 67  WRQRLELGLFRYRLEDLQTQILPGSVGFVAQLNIERGIQRRRPQNIRSVRQEFDPEQFNF 126

Query: 40  NSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYP 99
           N I   E +LF + R  K      P+     D +LV+IN +P+E+GHV +VP  +  L  
Sbjct: 127 NKIRPGE-VLFRMQREPKG-----PATPKQEDDVLVVINVSPLEWGHVLLVPAPAQGL-- 178

Query: 100 DARSFEMIVRIAFEIN----NYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDT 153
             R    ++R+  E      +  FR+ ++     AS  H++    Y    LPVE  P   
Sbjct: 179 PQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLHCYYLAHPLPVEGAPSTP 238

Query: 154 FFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSS---LREKNISYNLLIS 210
               G     I  L   P    LF YT      +   IS +C +   L ++ I++NL ++
Sbjct: 239 LDPKG----CIHLLQALPAPGFLF-YTSGPGPDLEVLISRVCRATDYLSDREIAHNLFVT 293

Query: 211 D-------------CGKRIFLFLQKSAI----SG--NLLAWECGGYFLFGSKYEFDQVTE 251
                          G R+ L+ +KS+     SG  N+   E  G+    +  +F  +TE
Sbjct: 294 RGAPPGPTSSTSDLSGIRVILWARKSSFGIKESGAFNVALCELAGHLPVKTSQDFSSLTE 353

Query: 252 EA 253
            A
Sbjct: 354 AA 355


>sp|Q6ZNW5|GDPP1_HUMAN GDP-D-glucose phosphorylase 1 OS=Homo sapiens GN=GDPGP1 PE=1 SV=2
          Length = 385

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 122/294 (41%), Gaps = 57/294 (19%)

Query: 4   GCFRYDVTASEIKVISGGKKFLAQLN-EKWIM--DPFILNSIDQ-------------NEE 47
           G FRY +   + +++ G   F+AQLN E+ +    P  + S+ Q               E
Sbjct: 74  GLFRYRLRELQTQILPGAVGFVAQLNVERGVQRRPPQTIKSVRQAFDPVQFNFNKIRPGE 133

Query: 48  LLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMI 107
           +LF + R       L+       + ILV+IN +P+E+GHV +VP  + +L    R     
Sbjct: 134 VLFRLHREPDLPGTLL------QEDILVVINVSPLEWGHVLLVPEPARQL--PQRLLPGA 185

Query: 108 VRIAFEIN----NYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTFFSDGQRG 161
           +R   E      +  FR+ ++     AS  H++    Y    LPVE  P +     G   
Sbjct: 186 LRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPLDPGG--- 242

Query: 162 IYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSS---LREKNISYNLLISD------- 211
            ++  L D P    LF YT      +   IS +C +   L +  I++NL ++        
Sbjct: 243 -HLHLLQDLPAPGFLF-YTRGPGPDLESLISRVCRATDYLTDHEIAHNLFVTRGAPPGKT 300

Query: 212 ------CGKRIFLFLQKSAI------SGNLLAWECGGYFLFGSKYEFDQVTEEA 253
                  G R+ L+ +KS+       + N+   E  G+    +  +F  +TE A
Sbjct: 301 SPSSALTGVRVILWARKSSFGIKDGEAFNVALCELAGHLPVKTSQDFSSLTEAA 354


>sp|Q8HXE4|GDPP1_MACFA GDP-D-glucose phosphorylase 1 OS=Macaca fascicularis GN=GDPGP1 PE=2
           SV=1
          Length = 385

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 61/296 (20%)

Query: 4   GCFRYDVTASEIKVISGGKKFLAQLN-EKWIM--------------DP--FILNSIDQNE 46
           G FRY +   + +++ G   F+AQLN E+ +               DP  F  N I Q  
Sbjct: 74  GLFRYRLRELQTQILPGVVGFVAQLNVERGVQRRRPQTIKSVRQAFDPEQFNFNKI-QPG 132

Query: 47  ELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGS----NRLYPDA- 101
           E+L+ + R       L+       + ILV+IN +P+E+GHV +VP  +     RL P A 
Sbjct: 133 EVLYRLHREPDLPGTLL------QEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGAL 186

Query: 102 RSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTFFSDGQ 159
           R+    V ++    +  FR+ ++     AS  H++    Y    LPVE  P +     G 
Sbjct: 187 RAGIEAVLLSL---HPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEQAPSEPLDPGG- 242

Query: 160 RGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSS---LREKNISYNLLISD----- 211
              ++  L   P    LF YT    + +   I  +C +   L +  I++NL ++      
Sbjct: 243 ---HLHLLQGLPAPGFLF-YTRGPGLDLESLICRVCRATDYLTDHEIAHNLFVTRGAPPG 298

Query: 212 --------CGKRIFLFLQKS------AISGNLLAWECGGYFLFGSKYEFDQVTEEA 253
                    G R+ L+ +KS        + N+   E  G+    +  +F  +TE A
Sbjct: 299 KTSPSSALTGVRVILWARKSCFGIKDGEAFNVALCELAGHLPVKTSQDFSSLTEAA 354


>sp|Q5E9T1|GDPP1_BOVIN GDP-D-glucose phosphorylase 1 OS=Bos taurus GN=GDPGP1 PE=2 SV=1
          Length = 385

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 121/302 (40%), Gaps = 64/302 (21%)

Query: 2   WR-----GCFRYDVTASEIKVISGGKKFLAQLN-EKWIM--------------DP--FIL 39
           WR     G FRY +     + + G   F+AQLN E+ +               DP  F  
Sbjct: 67  WRQRMELGLFRYPLGELPTQTLPGTVGFVAQLNVERGVQRRCPQNIKSVRQEFDPEQFNF 126

Query: 40  NSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGS----N 95
           N I   E +LF + R +        S  V  + ILV+IN +P+E+GHV +VP  +     
Sbjct: 127 NQIRPGE-VLFRLHRKQDC------SGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQ 179

Query: 96  RLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDT 153
           RL P A      V      ++  FR+ ++     AS  H++    Y    LPVE  P + 
Sbjct: 180 RLLPGA--LRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLHLHGYYLAHRLPVEGAPSEP 237

Query: 154 FFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSS---LREKNISYNLLIS 210
               G+    +  L   P    LF YT      +   IS +C +   L +  I++NL ++
Sbjct: 238 LDPRGR----LHVLQALPAPGFLF-YTSRPGPDLEALISRVCRATDYLTDCEIAHNLFVT 292

Query: 211 D-------------CGKRIFLFLQKSAI------SGNLLAWECGGYFLFGSKYEFDQVTE 251
                          G R+ L+ +K +       + N+   E  G+    +  +F  +TE
Sbjct: 293 RGAPPGKATSSSALSGVRVILWPRKPSFGIKEGEAFNVALCELAGHLPVKTAQDFSSLTE 352

Query: 252 EA 253
            A
Sbjct: 353 AA 354


>sp|Q08CA1|GDPP1_DANRE GDP-D-glucose phosphorylase 1 OS=Danio rerio GN=gdpgp1 PE=2 SV=1
          Length = 343

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 66/314 (21%)

Query: 4   GCFRYDVTASEIKVISGGKKFLAQLN---------------EKWIMDP--FILNSIDQNE 46
           G FRY +   E +++ G + ++AQLN                +   DP  F  N I+  +
Sbjct: 46  GLFRYRLDELETRILPGSRGYIAQLNIMRGTERRKPQEILSVRQNFDPKQFNFNKINP-K 104

Query: 47  ELLFCVTR-SEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFE 105
           ELLF + R SE+  S              VIIN +P+E+GH  +VP    + +P   +  
Sbjct: 105 ELLFELKRESERKCS--------------VIINVSPLEFGHCLLVP-EPEKCFPQVLT-H 148

Query: 106 MIVRIAFEI----NNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTFFSDGQ 159
           + V+   E      +  FR+ ++     AS  H++    Y    L +E  P      +  
Sbjct: 149 LAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLHLHGYYLNHRLKIESSPAKLVLPN-- 206

Query: 160 RGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLI---------- 209
             + +  L+D+P    LF     N  ++++AI  +   L + NI++NL +          
Sbjct: 207 --LNLYELVDFP-SGFLFYTQGPNLDLVVKAICSLTDVLVDHNIAHNLFLTRGCPPQMEP 263

Query: 210 ----SDCGKRIFL------FLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLS 259
               S  G R+ +      F  K   + N+   E  G+  F ++ +++  TEE +   + 
Sbjct: 264 DTSSSRNGVRVIVWPRLSCFGAKEESAFNVALCELAGHLPFKNRQDYESATEETVQDIIQ 323

Query: 260 AVSLNDEGFQVVKQ 273
              L  E    +K+
Sbjct: 324 KYLLPQEETAQLKE 337


>sp|Q0V9F1|GDPP1_XENTR GDP-D-glucose phosphorylase 1 OS=Xenopus tropicalis GN=gdpgp1 PE=2
           SV=1
          Length = 399

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 131/335 (39%), Gaps = 74/335 (22%)

Query: 1   MWRGCFRYDVTASEIKVISGGKKFLAQLN-----------------EKWIMDPFILNSID 43
           M  G FRY +   + K++ G   ++AQLN                 +K+  + F  N I 
Sbjct: 58  MNEGLFRYPLRNVQTKILPGSVSYVAQLNIQRSINRRKPEDIWSVQQKFNPNQFNYNKI- 116

Query: 44  QNEELLFCVTRSEKANS----------------ELIPSAAVPNDS---------ILVIIN 78
           ++EE++F + RSE  +S                    S + P  S          LV+IN
Sbjct: 117 KSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVIN 176

Query: 79  ANPIEYGHVFVVP----CGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--H 132
            +P+E+GHV  +P    C    L  +   F M     F  ++  FR+ ++     AS  H
Sbjct: 177 VSPLEFGHVLFMPDPSLCLPQILTENLMLFGM--ESVFLSSHPGFRVGFNSLGGFASVNH 234

Query: 133 VYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAIS 192
           ++    Y    L +E         +    I    +  +P    LF     +     + I 
Sbjct: 235 LHLHGFYLDHELLIESSCSKPLCPE----INFHLVTHFPAPGFLFYTDGKDLKSTAQKIC 290

Query: 193 EICSSLREKNISYNLLIS-----DCGK--------RIFLFLQKSAISG------NLLAWE 233
           ++   L  KNI++NL ++     D GK        R+ ++ +K +         N+   E
Sbjct: 291 KVTDFLVAKNIAHNLFVTRGSNPDTGKVSEDRNGIRVIIWARKPSFGAKEVSAFNVALCE 350

Query: 234 CGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGF 268
             G+    ++ +F  +TE+++   + +  L D+ F
Sbjct: 351 LAGHLPVKNQEDFISITEDSVIAIIHSCLLADDEF 385


>sp|A8E5Y3|GDPP1_XENLA GDP-D-glucose phosphorylase 1 OS=Xenopus laevis GN=gdpgp1 PE=2 SV=1
          Length = 399

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 76/336 (22%)

Query: 1   MWRGCFRYDVTASEIKVISGGKKFLAQLN-----------EKW-IMDPFILNSIDQN--- 45
           M  G FRY +   + K++ G   ++AQLN           + W I   F  N  + N   
Sbjct: 59  MNEGLFRYPLRNLQTKILPGSLSYVAQLNIQRSINRRKPEDIWSIQQKFNPNQFNYNKIK 118

Query: 46  -EELLFCVTRSEK---ANSELIPSAAV----------------------PNDSILVIINA 79
            EE++F + RSE     +S+ +  ++V                           LV+IN 
Sbjct: 119 PEEIVFQMIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINV 178

Query: 80  NPIEYGHVFVVP----CGSNRLYPDARSF--EMIVRIAFEINNYSFRLFYDCSSPGAS-- 131
           +P+E+GHV  +P    C    L  D   F  E ++  A    +  FR+ ++     AS  
Sbjct: 179 SPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSA----HPGFRVGFNSLGGFASVN 234

Query: 132 HVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAI 191
           H++    Y    L +E         +    +    +  +P  + LF     N     + I
Sbjct: 235 HLHLHGFYLDHDLFIESSSSKPLCPE----MNFHLITHFPAPSFLFYTDGRNLKSTAQNI 290

Query: 192 SEICSSLREKNISYNLLIS-----DCGK--------RIFLFLQKSAISG------NLLAW 232
            ++   L  KNI++NL I+     D G         R+ ++ +K +         N+   
Sbjct: 291 CKVTDFLVAKNIAHNLFITRGSNPDTGNGSEGRNGIRVNIWARKPSFGAKEVSAFNVALC 350

Query: 233 ECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGF 268
           E  G+    ++ +F+ +TE+++   +    L D+ F
Sbjct: 351 ELAGHLPVKNQEDFNSITEDSVIDIIHNCLLADDEF 386


>sp|Q5ZR76|GDPP1_CAEEL GDP-D-glucose phosphorylase 1 OS=Caenorhabditis elegans GN=gdpgp1
           PE=1 SV=1
          Length = 482

 Score = 33.9 bits (76), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 71  DSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFE----INNYSFRLFYDC- 125
           D  LV +NA+P+E  H  +VP   N+  P   + +  VRIA +    +++  F + ++  
Sbjct: 188 DRHLVAVNASPLERDHSLIVP-SVNKCSPQVLTLQ-AVRIAVDLMLLVDDDMFHILFNSL 245

Query: 126 -SSPGASHVYFQACYFP 141
                 +H++  A Y+P
Sbjct: 246 LGQASVNHLHLHAMYWP 262


>sp|B4S5N0|EFG_PROA2 Elongation factor G OS=Prosthecochloris aestuarii (strain DSM 271 /
           SK 413) GN=fusA PE=3 SV=1
          Length = 704

 Score = 33.1 bits (74), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 184 RIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFL-FGS 242
           RI M+EA+SE+  +L EK +    +  D  +++   L+++ ++G ++   CG  F   G 
Sbjct: 220 RINMLEAVSEVDETLLEKYLEGEDITEDEVRKV---LRQATLAGTIIPTLCGSSFKNKGV 276

Query: 243 KYEFDQVTE 251
           ++  D V E
Sbjct: 277 QFMLDTVVE 285


>sp|O48401|GP47_BPSP1 Putative gene 47 protein OS=Bacillus phage SP01 GN=47 PE=4 SV=1
          Length = 94

 Score = 31.2 bits (69), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 11 TASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCV 52
          T  E+K I  G +   +L   W+ D  +   +D NEE LFC+
Sbjct: 11 TVDEVKEIWNGLEEAGRLYAVWLSDDHVYGIVDVNEEGLFCL 52


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.140    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,867,449
Number of Sequences: 539616
Number of extensions: 4099949
Number of successful extensions: 11175
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11151
Number of HSP's gapped (non-prelim): 14
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)