BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023283
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
SV=1
Length = 329
Score = 336 bits (862), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 156/236 (66%), Positives = 193/236 (81%), Gaps = 3/236 (1%)
Query: 14 VEVTKDRNGIEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRG 73
E+ K +G+E+VVLR R A+I L+GGQ SW+ + GEELLF S+KAIFKPP A+RG
Sbjct: 24 AELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRG 83
Query: 74 GIPICFPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIW 133
GIPIC PQFG G+LEQHGFARNR W ID++PPPL P + K +VDL+L+P+EEDLKIW
Sbjct: 84 GIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPL-PVNPAIKAFVDLILRPAEEDLKIW 142
Query: 134 PHSFEFRLRVSLAADGNLALISRIRNINC--KPFSFSIAYHTYFAISDISEVRIEGLETL 191
PHSFEFRLRV+L G+L+L SRIRN N +PFS++ AYHTYF +SDISEVR+EGLET+
Sbjct: 143 PHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETM 202
Query: 192 DYLDNLCQRERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIHKEGLPD 247
DYLDNL +ERFTEQGDA+ FESE+D+VYL++ KIAI+DHE+K+TFV+ KEGLPD
Sbjct: 203 DYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPD 258
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
(strain K12) GN=yeaD PE=1 SV=2
Length = 294
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 23 IEQVVLRNPRGASAKISLHGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQF 82
++ +V+ +P+ A +L G LSW+ EE+L+ S FK A+RGG+P+C+P F
Sbjct: 26 LDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWF 84
Query: 83 G--NRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHSFEFR 140
G + L HGFARN W + + D+ G V + L SEE K WPH F
Sbjct: 85 GPAAQQGLPAHGFARNLPWTLKSH-----HEDADG-VALTFELTQSEETKKFWPHDFTLL 138
Query: 141 LRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDISEVRIEGLETLDYLDNLCQR 200
+ + L S F + A HTYF + DI++V + GL ++D +
Sbjct: 139 AHFRVGKTCEIDLESH------GEFETTSALHTYFNVGDIAKVSVSGLGD-RFIDKVNDA 191
Query: 201 ERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVI 240
+ TF DRVYL+ D I D R +
Sbjct: 192 KENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAV 231
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
Length = 297
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 24 EQVVLRNPRGASAKISL--HGGQALSWRTERGEELLFTSTKAIFKPPHAVRGGIPICFPQ 81
++VVL +P + + + +G SW+ + EE L+ ST A VRGGIP+ FP
Sbjct: 8 KEVVLTHPADETTSVHILKYGATVYSWKL-KSEEQLWLSTAAKLDGSKPVRGGIPLVFPV 66
Query: 82 FGNRGS------LEQHGFARNRSWVI----DDNPPPLKPSDSQGKVYVDLLLKP---SEE 128
FG + L QHG ARN +W +NPP V LKP + E
Sbjct: 67 FGKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPPT-----------VQFGLKPEIANPE 115
Query: 129 DLKIWPHSFEFRLRVSLAADGNLALISRIRNINCKPFSFSIAYHTYFAISDISEVRIEGL 188
K+WP + L V L +D I + K F+ +HTYF I DI + L
Sbjct: 116 LTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNL 175
Query: 189 ETLDYLDNLCQRERFTEQGDALTFESEIDRVY--LSSSDKIAILDHERKRTFVIHKEGLP 246
+ D L +E + ++ +TF E D +Y +S+ I I+D + + + + LP
Sbjct: 176 AGMKLYDQLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLP 233
Query: 247 D 247
D
Sbjct: 234 D 234
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
PE=3 SV=1
Length = 271
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 54 EELLFTSTKAIFKPPHAVRGGIPICFPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDS 113
+++L+ S FK +A+RGG+PIC+P FG HG AR R W +
Sbjct: 53 QDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQ-PAHGTARIRLWQLSH---------- 101
Query: 114 QGKVYVDLLLKPSEEDLKIWPHSFEFRLRVSLAADGNL--ALISRIRNINCKPFSFS--- 168
Y+ + + RL L +D N+ A +S + C +F+
Sbjct: 102 ---YYISV---------------HKVRLEFELFSDLNIIEAKVSMVFTDKCH-LTFTHYG 142
Query: 169 -----IAYHTYFAISDISEVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSS 223
A HTYF I DI++V ++GL + ++L Q++ ++ +D +Y +
Sbjct: 143 EESAQAALHTYFNIGDINQVEVQGLPETCF-NSLNQQQENVPSPRHIS--ENVDCIYSAE 199
Query: 224 SDKIAILDHERKRTFVIH 241
+ + ILD RT +H
Sbjct: 200 NMQNQILDKSFNRTIALH 217
>sp|Q8R4E9|CDT1_MOUSE DNA replication factor Cdt1 OS=Mus musculus GN=Cdt1 PE=1 SV=1
Length = 557
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 182 EVRIEGLETLDYLDNLCQRERFTEQGDALTFESEIDRVYLSSSDKIAILDHERKRTFVIH 241
E+R++ LE L L + + +E+ ALT E R + S + A+ E ++ V+
Sbjct: 457 ELRLQRLERLPELARVLRNVFVSERKPALTMEVVCAR--MVDSCQTALSPGEMEKHLVLL 514
Query: 242 KEGLPDWCGIH 252
E LPDW +H
Sbjct: 515 AELLPDWLSLH 525
>sp|A8K4G0|CLM7_HUMAN CMRF35-like molecule 7 OS=Homo sapiens GN=CD300LB PE=1 SV=2
Length = 201
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Query: 224 SDKIAILDHERKRTFVIHKEGLPD------WCGIHGRG 255
SD+++I D+++ RTF + EGL WCGI RG
Sbjct: 73 SDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIERRG 110
>sp|O09175|AMPB_RAT Aminopeptidase B OS=Rattus norvegicus GN=Rnpep PE=1 SV=2
Length = 650
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 79 FPQFGNRGSLEQHGFARNRSWVIDDNPPPLKPSDSQGKVYVDLLLKPSEEDLKIWPHS 136
FP+ +G GF NR W+ PP P S G D L+KP+EE ++W S
Sbjct: 463 FPELKKKGVDSIPGFEFNR-WLNTPGWPPYLPDLSPG----DSLMKPAEELAELWAAS 515
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,146,051
Number of Sequences: 539616
Number of extensions: 4532994
Number of successful extensions: 9049
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9035
Number of HSP's gapped (non-prelim): 12
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)