BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023284
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93227|FNTA_SOLLC Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Solanum lycopersicum GN=FTA PE=2 SV=1
Length = 346
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 203/238 (85%)
Query: 15 RLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKE 74
R+P +RP+W+DV P+PQDDGP PVVPIAY +FSETM YFRA+Y +DERS+R+ QLT E
Sbjct: 10 RIPFKERPDWADVKPVPQDDGPCPVVPIAYTEDFSETMDYFRAIYVADERSTRALQLTGE 69
Query: 75 AICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTG 134
AI LNPGNYTVW FRR ++E L DL++EL FV RIA N+KNYQ+WHHRRW+AEKLG
Sbjct: 70 AIQLNPGNYTVWQFRRVVLEALGVDLREELKFVDRIAGENTKNYQIWHHRRWLAEKLGAD 129
Query: 135 AVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQR 194
AV EL+FTKK+ S DAKNYHAWS+RQWVLQALGGWEDEL YCQ LL +DI+NNSAWNQR
Sbjct: 130 AVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALGGWEDELAYCQQLLEDDIYNNSAWNQR 189
Query: 195 YFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRM 252
YFVVTRSPLLGGL+AMR+ EVN+T++AI +PENESPWRYLRGLYK+DT+S + D ++
Sbjct: 190 YFVVTRSPLLGGLVAMRELEVNYTVQAIRASPENESPWRYLRGLYKNDTQSLVQDSQV 247
>sp|O24304|FNTA_PEA Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Pisum sativum GN=FTA PE=2 SV=1
Length = 333
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/247 (69%), Positives = 203/247 (82%)
Query: 6 GDEQQQEAERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERS 65
G+ + +E +R+PL RPEWSDVTPIPQDDGP+PVVPI Y EFSE M YFRAVY++ E S
Sbjct: 3 GNIEVEEDDRVPLRLRPEWSDVTPIPQDDGPSPVVPINYSEEFSEVMDYFRAVYFAKELS 62
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
SR+ LT EAI LN GNYTVWHFRR ++E+L DL E FV R+A NSKNYQ+WHHRR
Sbjct: 63 SRALALTAEAIGLNAGNYTVWHFRRLLLESLKVDLHVEREFVERVASGNSKNYQIWHHRR 122
Query: 126 WVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDI 185
WVAEKLG A N EL+FTKK+LS+DAK+YHAWS+RQWVLQ LGGWEDEL YC LL EDI
Sbjct: 123 WVAEKLGPEARNSELEFTKKILSVDAKHYHAWSHRQWVLQNLGGWEDELSYCSELLAEDI 182
Query: 186 FNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTES 245
FNNSAWNQRYFV+TRSP+LGGL AMR+SEV FT+EAI+ PENES WRYLRGL+KD++
Sbjct: 183 FNNSAWNQRYFVITRSPVLGGLKAMRESEVLFTVEAIISYPENESSWRYLRGLFKDESTL 242
Query: 246 WINDPRM 252
++ND ++
Sbjct: 243 YVNDAQV 249
>sp|Q9LX33|FNTA_ARATH Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Arabidopsis thaliana GN=FTA PE=1 SV=2
Length = 326
Score = 359 bits (922), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/239 (71%), Positives = 203/239 (84%)
Query: 14 ERLPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTK 73
E +PLSQR EWSDV P+ QDDGPNPVVPIAYK EF ETM YFRA+Y+SDERS R+ +LT+
Sbjct: 5 ETVPLSQRLEWSDVVPLTQDDGPNPVVPIAYKEEFRETMDYFRAIYFSDERSPRALRLTE 64
Query: 74 EAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGT 133
E + LN GNYTVWHFRR ++E L+ DL +EL F+ RIA+ NSKNYQLWHHRRWVAEKLG
Sbjct: 65 ETLLLNSGNYTVWHFRRLVLEALNHDLFEELEFIERIAEDNSKNYQLWHHRRWVAEKLGP 124
Query: 134 GAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQ 193
+EL+FT+++LSLDAK+YHAWS+RQW L+ALGGWEDELDYC LL D+FNNSAWNQ
Sbjct: 125 DVAGRELEFTRRVLSLDAKHYHAWSHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQ 184
Query: 194 RYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRM 252
RY+V+T+SPLLGGL AMR+SEV++TI+AIL NP NES WRYL+ LYKDD ESWI+DP +
Sbjct: 185 RYYVITQSPLLGGLEAMRESEVSYTIKAILTNPANESSWRYLKALYKDDKESWISDPSV 243
>sp|P29702|FNTA_BOVIN Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Bos taurus GN=FNTA PE=2 SV=2
Length = 375
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 151/221 (68%), Gaps = 3/221 (1%)
Query: 21 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNP 80
RPEW+D+ P+PQ+DGPNPVV I Y +F + YFRAV DERS R+F+LT++AI LN
Sbjct: 65 RPEWADIDPVPQNDGPNPVVQIIYSEKFQDVYDYFRAVLQRDERSERAFKLTRDAIELNA 124
Query: 81 GNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKEL 140
NYTVWHFRR ++++L DL +E+ ++ I + KNYQ+WHHRR + E L + +EL
Sbjct: 125 ANYTVWHFRRVLLKSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLVEWLRDPS--QEL 182
Query: 141 QFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR 200
+F +L+ DAKNYHAW +RQWV+Q W++EL Y LL ED+ NNS WNQRYFV++
Sbjct: 183 EFIADILTQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 242
Query: 201 SPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 241
+ A+ + EV +T+E I P NES W YL+G+ +D
Sbjct: 243 TTGYNDR-AILEREVQYTLEMIKLVPHNESAWNYLKGILQD 282
>sp|Q61239|FNTA_MOUSE Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Mus musculus GN=Fnta PE=1 SV=1
Length = 377
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
Query: 21 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNP 80
R EW+D+ P+PQ+DGPNPVV I Y +F + YFRAV DERS R+F+LT++AI LN
Sbjct: 69 RAEWADIDPVPQNDGPNPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128
Query: 81 GNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKEL 140
NYTVWHFRR ++ +L DLQ+E+ ++ I + KNYQ+WHHRR + E L + +EL
Sbjct: 129 ANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLKDPS--QEL 186
Query: 141 QFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR 200
+F +LS DAKNYHAW +RQWV+Q W++EL Y LL ED+ NNS WNQR+FV++
Sbjct: 187 EFIADILSQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVISN 246
Query: 201 SPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 241
+ A+ + EV +T+E I P NES W YL+G+ +D
Sbjct: 247 TTGYSDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286
>sp|P49354|FNTA_HUMAN Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Homo sapiens GN=FNTA PE=1 SV=1
Length = 379
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
Query: 21 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNP 80
R EW+D+ P+PQ+DGPNPVV I Y +F + YFRAV DERS R+F+LT++AI LN
Sbjct: 69 RAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128
Query: 81 GNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKEL 140
NYTVWHFRR ++++L DL +E+ ++ I + KNYQ+WHHRR + E L + +EL
Sbjct: 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPS--QEL 186
Query: 141 QFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR 200
+F +L+ DAKNYHAW +RQWV+Q W++EL Y LL ED+ NNS WNQRYFV++
Sbjct: 187 EFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246
Query: 201 SPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 241
+ A+ + EV +T+E I P NES W YL+G+ +D
Sbjct: 247 TTGYNDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286
>sp|Q04631|FNTA_RAT Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Rattus norvegicus GN=Fnta PE=1 SV=1
Length = 377
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
Query: 21 RPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNP 80
R EW+D+ P+PQ+DGP+PVV I Y +F + YFRAV DERS R+F+LT++AI LN
Sbjct: 69 RAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128
Query: 81 GNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKEL 140
NYTVWHFRR ++ +L DLQ+E+ ++ I + KNYQ+WHHRR + E L + +EL
Sbjct: 129 ANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLKDPS--QEL 186
Query: 141 QFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR 200
+F +L+ DAKNYHAW +RQWV+Q W++EL Y LL ED+ NNS WNQR+FV++
Sbjct: 187 EFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVISN 246
Query: 201 SPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 241
+ A+ + EV +T+E I P NES W YL+G+ +D
Sbjct: 247 TTGYSDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286
>sp|Q54RT9|FNTA_DICDI Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Dictyostelium discoideum GN=fntA PE=3
SV=1
Length = 322
Score = 215 bits (548), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 150/241 (62%), Gaps = 13/241 (5%)
Query: 16 LPLSQRPEWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEA 75
+P S+RPEWSDV P+ QDDGP+P+ PI Y F + M+YFRA+ S E+S R L +E
Sbjct: 11 VPFSKRPEWSDVKPLAQDDGPHPICPILYSEVFKDKMNYFRAILKSKEKSLRVLDLLEEV 70
Query: 76 ICLNPGNYTVWHFRRQII------ETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAE 129
I NP NYT+W++RR+++ ET+ D+Q E+ + + +++ KNYQ+W+HRR++ E
Sbjct: 71 IQENPSNYTIWYYRREVLKAIEQDETIEYDIQQEMNLLNDMGETDPKNYQIWNHRRFIVE 130
Query: 130 KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNS 189
K G+ NKE +F +L DAKNYHAWS+RQW+L+ W EL LL D NNS
Sbjct: 131 KY-IGSDNKEKEFLSGVLLEDAKNYHAWSHRQWLLKTYRDWNGELAMVDKLLSLDHRNNS 189
Query: 190 AWNQRYFVVTR---SPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESW 246
WN R+FV++ SP LI + EV F I +P NESPW YL+GL+K S
Sbjct: 190 VWNHRFFVISNLNPSPFPLSLI---EREVEFAFNHIRHSPNNESPWSYLKGLFKGQKIST 246
Query: 247 I 247
I
Sbjct: 247 I 247
>sp|O60052|FNTA_SCHPO Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cwp1 PE=1 SV=1
Length = 294
Score = 177 bits (448), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 130/216 (60%), Gaps = 4/216 (1%)
Query: 23 EWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNPGN 82
E+ +TPIPQDDG NP+ I Y + + M+YFRA+ E S R+ LT I NP +
Sbjct: 16 EYGPLTPIPQDDGENPLAKICYTTGYEQGMAYFRAIMAKKEYSLRALNLTGFLIMNNPAH 75
Query: 83 YTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKELQF 142
YTVW +R QI+ + + +EL ++ IA+ KNYQ+WHHR+ + T +EL+F
Sbjct: 76 YTVWAYRFQILNHTPSYIDNELEWLDEIAEDFQKNYQVWHHRQKILSL--TKNYERELEF 133
Query: 143 TKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTRSP 202
TKKM +D+KNYH WSYR W+LQ + EL LL +DI+NNSAWN R++V+ +
Sbjct: 134 TKKMFEIDSKNYHVWSYRVWILQNFNDYSQELKLTNELLEKDIYNNSAWNHRFYVLFETS 193
Query: 203 LLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGL 238
+ + E+N+ + IL P+N+S W YL G+
Sbjct: 194 KVVSW--SLEEELNYLKDKILFAPDNQSAWNYLCGV 227
>sp|P29703|FNTA_YEAST Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAM2 PE=1 SV=1
Length = 316
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 9/224 (4%)
Query: 23 EWSDVTPIP-QDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNPG 81
++SDV P+P + D + + I Y ++ M RA+ +E S R+ QLT E I + P
Sbjct: 5 DYSDVKPLPIETDLQDELCRIMYTEDYKRLMGLARALISLNELSPRALQLTAEIIDVAPA 64
Query: 82 NYTVWHFRRQIIETLHTDLQD-------ELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTG 134
YT+W++R I+ + ++ +D EL ++ + +N KNYQ+W +R+ + + +
Sbjct: 65 FYTIWNYRFNIVRHMMSESEDTVLYLNKELDWLDEVTLNNPKNYQIWSYRQSLLKLHPSP 124
Query: 135 AVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAWNQR 194
+ +EL K M+ D+KNYH WSYR+W ++ EL Y L+ DI+NNSAW R
Sbjct: 125 SFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFSDFQHELAYASDLIETDIYNNSAWTHR 184
Query: 195 YFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGL 238
F + + + + D E+ F ++ I P+N SPW YLRG
Sbjct: 185 MFYWVNAKDVISKVELAD-ELQFIMDKIQLVPQNISPWTYLRGF 227
>sp|Q9Y765|FNTA_CANAX Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Candida albicans GN=RAM2 PE=1 SV=1
Length = 306
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 9/226 (3%)
Query: 23 EWSDVTPIPQDDGPNPVVPIAYKPEFSETMSYFRAVYYSDERSSRSFQLTKEAICLNPGN 82
++SD+TP+ + + I Y ++ + M A+ ++E S R+ +T+ I +
Sbjct: 7 DYSDITPVDINTEEPQICQILYDEDYKQIMGLLLALMKAEEYSERALHITELGINELASH 66
Query: 83 YTVWHFRRQIIETL-HTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVN---- 137
YT+W +R I++ L + +L DEL + IA N KNYQ+W++R+ + ++ N
Sbjct: 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDP 126
Query: 138 -KELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWED--ELDYCQMLLGEDIFNNSAWNQR 194
+E + MLS D KN+H WSYR+W++ D EL + ++ D+ NNSAW+ R
Sbjct: 127 YREFPILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHR 186
Query: 195 YFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYK 240
+F++ L + D E+N+ + I+ P+N S W YL G+++
Sbjct: 187 FFLLFSKKHLATDNTI-DEELNYVKDKIVKCPQNPSTWNYLLGIHE 231
>sp|Q00618|PGTA_YEAST Geranylgeranyl transferase type-2 subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BET4 PE=1
SV=3
Length = 327
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 17/196 (8%)
Query: 65 SSRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQ-----DELAFVGRIAKSNSKNYQ 119
S + + T E + NP +W++RR II +L ++L+ EL FV + K K Y
Sbjct: 45 SIEALKKTSELLEKNPEFNAIWNYRRDIIASLASELEIPFWDKELVFVMMLLKDYPKVYW 104
Query: 120 LWHHRRWVAEKLGTGAVN---KELQFTKKMLSLDAKNYHAWSYRQWVLQALGGW------ 170
+W+HR WV + T + EL K+L DA+NYH W YR+ V+ +
Sbjct: 105 IWNHRLWVLKHYPTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIESITNKSLD 164
Query: 171 EDELDYCQMLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRD---SEVNFTIEAILGNPE 227
++E +Y + + +I N SAW+QR +++R G + ++ +E+++ I A+ + E
Sbjct: 165 KEEFEYTTIKINNNISNYSAWHQRVQIISRMFQKGEVGNQKEYIRTEISYIINAMFTDAE 224
Query: 228 NESPWRYLRGLYKDDT 243
++S W Y++ K+D
Sbjct: 225 DQSVWFYIKWFIKNDI 240
>sp|Q55DQ4|PGTA_DICDI Geranylgeranyl transferase type-2 subunit alpha OS=Dictyostelium
discoideum GN=rabggta PE=3 SV=2
Length = 311
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 68 SFQLTKEAICLNPGNYTVWHFRR----QIIET-----LHTDLQDELAFVGRIAKSNSKNY 118
S ++K + NP YT+W++RR Q ET L Q+E+ F+ + +K+Y
Sbjct: 50 SLSVSKLVLIENPEFYTIWNYRRLAILQFTETKENSELQVIYQNEMKFLEECIQRFTKSY 109
Query: 119 QLWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALG-GWEDELDYC 177
+W HR+W+A ++ +E++ K+L+ D +N+H W +R+++L+ EDEL Y
Sbjct: 110 WIWFHRQWIALRMDNCDWEREMKLCTKLLNFDLRNFHCWGHRRFILKHSNIKLEDELKYT 169
Query: 178 QMLLGEDIFNNSAWNQRYFV---VTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRY 234
+ ++ N SAW+QR + + + P L+ E A+ P++ S W Y
Sbjct: 170 TEKVEQNFSNYSAWHQRSSILPKIYKEP--EQLLEKILEEFELVRNAVYTEPKDSSSWIY 227
Query: 235 LRGL 238
+ L
Sbjct: 228 HKWL 231
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 67 RSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRW 126
R +L + + + N+ W RR I++ + L+DEL + + N NY WH R
Sbjct: 129 REMKLCTKLLNFDLRNFHCWGHRRFILKHSNIKLEDELKYTTEKVEQNFSNYSAWHQRSS 188
Query: 127 VAEKLGT------GAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQALGG 169
+ K+ + +E + + + + K+ +W Y +W++ +
Sbjct: 189 ILPKIYKEPEQLLEKILEEFELVRNAVYTEPKDSSSWIYHKWLVATIKS 237
>sp|Q5NVK5|PGTA_PONAB Geranylgeranyl transferase type-2 subunit alpha OS=Pongo abelii
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTD---------LQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR++++ L T ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWV-LQALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L +D +N+H W YR++V QA +EL +
Sbjct: 109 TWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTD 222
Query: 226 PENESPWRYLR 236
P ++S W Y R
Sbjct: 223 PNDQSAWFYHR 233
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + ++ N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 TRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + KEL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|Q92696|PGTA_HUMAN Geranylgeranyl transferase type-2 subunit alpha OS=Homo sapiens
GN=RABGGTA PE=1 SV=2
Length = 567
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 29/191 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTD---------LQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR++++ L T ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWV-LQALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L +D +N+H W YR++V QA +EL +
Sbjct: 109 TWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTD 222
Query: 226 PENESPWRYLR 236
P ++S W Y R
Sbjct: 223 PNDQSAWFYHR 233
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + ++ N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 TRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + KEL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|O93829|PGTA_CANAX Geranylgeranyl transferase type-2 subunit alpha OS=Candida albicans
GN=BET4 PE=3 SV=1
Length = 371
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 55/234 (23%)
Query: 60 YSDERSSRSFQLTKEAICLNPGNYTVWHFRRQII-----------ETLHTD-LQDELAFV 107
YSDE + T E + +NP YT+W++RR+I+ + ++ D L +L FV
Sbjct: 45 YSDEALIK----TNELLIINPEFYTIWNYRREILINNYSSSNDKDDQIYEDILNQDLNFV 100
Query: 108 GRIAKSNSKNYQLWHHRRWVA-EKLGTGAVNKELQF--TKKMLSLDAKNYHAWSYRQWVL 164
K K Y +W+HRRW+ E + G VN + +F K+L LD +N+H W YR++V+
Sbjct: 101 LVQLKKFPKCYWIWNHRRWLLFELVKLGKVNWKYEFGVVSKLLDLDQRNFHGWHYRRFVV 160
Query: 165 Q------------ALGGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR------------ 200
+ L DE +Y + + +D N SAW+ R ++ +
Sbjct: 161 KNMELECKNDTTLILKINLDEFNYTTLKIQKDFSNFSAWHNRTKLIPKIYNLIQQQQQQQ 220
Query: 201 ---SPLLGGL---------IAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDD 242
+ G L I + +++ + +PE+ S W YL L DD
Sbjct: 221 QKDGKIFGDLPGIELFQNPILLLKNDLEMIKTGVYMSPEDTSVWLYLYWLLTDD 274
>sp|A5A779|PGTA_PIG Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 29/191 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTD---------LQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR++++ L ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQRLEVQKSPEELAALVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL-QALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L +D +N+H W YR++V QA +EL +
Sbjct: 109 TWHHRCWLLGRLPEPNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTD 222
Query: 226 PENESPWRYLR 236
P ++S W Y R
Sbjct: 223 PNDQSAWFYHR 233
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + ++ N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 ARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + KEL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|O94412|PGTA_SCHPO Geranylgeranyl transferase type-2 subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=bet4 PE=3 SV=1
Length = 344
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 25/250 (10%)
Query: 47 EFSETMSYFRAVYYSDERSSRSFQLTKEAICLNPGNYTVWHFRRQII----------ETL 96
E+ +S F+ + S + +LT E + NP Y+VW++RR+I+
Sbjct: 27 EYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNPETYSVWNYRREILLNDVFPKISLNEK 86
Query: 97 HTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHA 156
L +EL +V K K Y +++HRRW E N E+ T+K+LS DA+N+H
Sbjct: 87 QDLLDNELKYVLSKMKVFPKVYWIFNHRRWCLENAPYPNWNYEMMITEKLLSADARNFHG 146
Query: 157 WSYRQWVLQAL------GGWEDELDYCQMLLGEDIFNNSAWNQRYFVVTR------SPLL 204
W YR++V+ + + E++Y + + N SA + R ++ P
Sbjct: 147 WHYRRYVVSQIERAGNCSLAKKEMEYTTSAIATNFSNFSALHNRTKLIETILNLEADPNS 206
Query: 205 GGLIA--MRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRMLLSVFESFEY 262
+A + + E++ +A+ +P++ S W Y R L + + ++++ E +Y
Sbjct: 207 QKALAKQILEQELDMIHQAVFTDPDDSSVWIYHRWLMGHCNPNSMTPLISMITIEERIQY 266
Query: 263 -QKQLCFCSE 271
QK++ E
Sbjct: 267 LQKEIELIQE 276
>sp|Q08602|PGTA_RAT Geranylgeranyl transferase type-2 subunit alpha OS=Rattus
norvegicus GN=Rabggta PE=1 SV=1
Length = 567
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTD---------LQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR++++ L T+ ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQW-VLQALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L D +N+H W YR++ QA +EL +
Sbjct: 109 TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD 222
Query: 226 PENESPWRYLRGL 238
P ++S W Y R L
Sbjct: 223 PNDQSAWFYHRWL 235
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + + N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + KEL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|Q5EA80|PGTA_BOVIN Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 29/191 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQII---------ETLHTDLQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR+++ E L T ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQQLEVQKSPEELATLVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQW-VLQALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L +D +N+H W YR++ QA +EL +
Sbjct: 109 TWHHRCWLLSRLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTD 222
Query: 226 PENESPWRYLR 236
P ++S W Y R
Sbjct: 223 PNDQSAWFYHR 233
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + ++ N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 ARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + KEL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|Q9JHK4|PGTA_MOUSE Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus
GN=Rabggta PE=1 SV=1
Length = 567
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTD---------LQDELAFVGRIAKSNSKNYQ 119
+LT + + NP T+W+ RR++++ L T ++ EL F+ + N K+Y
Sbjct: 49 LELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYG 108
Query: 120 LWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQW-VLQALGGWEDELDYCQ 178
WHHR W+ +L +EL+ + L D +N+H W YR++ QA +EL +
Sbjct: 109 TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168
Query: 179 MLLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDS-------------EVNFTIEAILGN 225
L+ + N S+W+ RS LL L DS E+ A +
Sbjct: 169 SLITRNFSNYSSWH------YRSCLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFTD 222
Query: 226 PENESPWRYLRGL 238
P ++S W Y R L
Sbjct: 223 PNDQSAWFYHRWL 235
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 66 SRSFQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRR 125
+R +L + + N+ W +RR + +ELAF + N NY WH+R
Sbjct: 126 ARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRS 185
Query: 126 WVAE------------KLGTGAVNKELQFTKKMLSLDAKNYHAWSYRQWVL 164
+ +L + +EL+ + D + AW Y +W+L
Sbjct: 186 CLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFTDPNDQSAWFYHRWLL 236
>sp|A1L3L1|PTR1B_XENLA Protein prenyltransferase alpha subunit repeat-containing protein
1-B (Fragment) OS=Xenopus laevis GN=ptar1-b PE=2 SV=1
Length = 431
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 37/190 (19%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSN-SKNYQLWHHRRWV 127
+T + LNP T W+ R+++I++ + +L G++A + K+ + W HRRWV
Sbjct: 87 IDVTCTLLLLNPDFTTAWNVRKELIQSGTLNPVKDLQL-GKLALTKFPKSPETWIHRRWV 145
Query: 128 AEK----------LGTGA------------VNKELQFTKKMLSLDAKNYHAWSYRQWVLQ 165
++ +G A V +E+ + NY++WS+R WV+Q
Sbjct: 146 LQRVVQELVVAAVVGKDATCPETYERIQTIVQEEMHVCYEAAGRYPSNYNSWSHRIWVIQ 205
Query: 166 ALGGWE-----DELDYCQMLLGEDIFNNSAWNQRYFVVTRSPLLGGLIA--MRDSEVNFT 218
LG DEL + + + ++S ++ R F LL L+ ++DS+
Sbjct: 206 HLGNLNVKLLIDELSSTKHWVSMHVSDHSGFHYRQF------LLKSLLCKTLKDSDNVTA 259
Query: 219 IEAILGNPEN 228
+ ++ N +N
Sbjct: 260 VPDLIANEKN 269
>sp|A3KPW7|PTAR1_DANRE Protein prenyltransferase alpha subunit repeat-containing protein 1
OS=Danio rerio GN=ptar1 PE=2 SV=1
Length = 426
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 30/157 (19%)
Query: 71 LTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKS-NSKNYQLWHHRRWVAE 129
+T + LNP T W+ R+++++ + + +L ++G++A S + K+ + W HRRWV +
Sbjct: 90 ITSTLLLLNPDFTTAWNVRKELLQCGVLNPEKDL-YLGKLALSKHPKSPETWIHRRWVLQ 148
Query: 130 KLGT-----------------------GAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQA 166
+L A+ +E++ + NY+AWS+R WVLQ
Sbjct: 149 RLQKECSPSGQELKDSAESRRQCERLQRALQEEMRVCAEAAGRYPSNYNAWSHRIWVLQN 208
Query: 167 LGG-----WEDELDYCQMLLGEDIFNNSAWNQRYFVV 198
+ DEL ++ + + ++S ++ R ++
Sbjct: 209 MAKGNLKVLHDELSSTRLWVSMHVSDHSGFHYRQHLL 245
>sp|Q7Z6K3|PTAR1_HUMAN Protein prenyltransferase alpha subunit repeat-containing protein 1
OS=Homo sapiens GN=PTAR1 PE=2 SV=2
Length = 402
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 29/158 (18%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSN-SKNYQLWHHRRWV 127
+T + LNP T W+ R+++I + + +L +G++A + K+ + W HRRWV
Sbjct: 88 IDVTCTLLLLNPDFTTAWNVRKELILSGTLNPIKDL-HLGKLALTKFPKSPETWIHRRWV 146
Query: 128 AEK---------------LGT-------GAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQ 165
++ LGT + +E++ + NY+AWS+R WVLQ
Sbjct: 147 LQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQ 206
Query: 166 ALGGWE-----DELDYCQMLLGEDIFNNSAWNQRYFVV 198
L + DEL + + ++S ++ R F++
Sbjct: 207 HLAKLDVKILLDELSSTKHWASMHVSDHSGFHYRQFLL 244
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 100 LQDELAFVGRIAKSNSKNYQLWHHRRWVAE---KLGTGAVNKELQFTKKMLSLDAKNYHA 156
+Q+E+ G A NY W HR WV + KL + EL TK S+ ++
Sbjct: 177 IQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSDHSG 236
Query: 157 WSYRQWVLQALGGWEDELDYCQMLLGEDIFNNSAW----------NQRYFVVTRSPLLGG 206
+ YRQ++L++L Q ++ + + ++ V T P +
Sbjct: 237 FHYRQFLLKSL--------ISQTVIDSSVMEQNPLRSEPALVPPKDEEAAVSTEEPRI-N 287
Query: 207 LIAMRDSEVNFTIEAILGNPENESPWRYLRGLY 239
L + + EV F+ + I P +E+ W + R ++
Sbjct: 288 LPHLLEEEVEFSTDLIDSYPGHETLWCHRRHIF 320
>sp|Q0IHB3|PTR1A_XENLA Protein prenyltransferase alpha subunit repeat-containing protein
1-A OS=Xenopus laevis GN=ptar1-a PE=2 SV=1
Length = 432
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 29/156 (18%)
Query: 69 FQLTKEAICLNPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSN-SKNYQLWHHRRWV 127
+T + LNP T W+ R+++I++ + +L G++A + K+ + W HRRW
Sbjct: 88 IDVTCTLLLLNPDFTTAWNVRKELIQSGTLNPVKDLQL-GKLALTKFPKSPETWIHRRWA 146
Query: 128 AEKLGT----------------------GAVNKELQFTKKMLSLDAKNYHAWSYRQWVLQ 165
++L V +E+ + NY++WS+R WV+Q
Sbjct: 147 LQRLVQELVVAAVVDKDAICPETSERIQAIVEEEMHVCCEAAGRYPSNYNSWSHRIWVVQ 206
Query: 166 ALGGWE-----DELDYCQMLLGEDIFNNSAWNQRYF 196
LG + DEL + + + ++S ++ R F
Sbjct: 207 HLGNLKATLLIDELSSTKHWVSMHVSDHSGFHYRQF 242
>sp|B3R018|RL17_PHYMT 50S ribosomal protein L17 OS=Phytoplasma mali (strain AT) GN=rplQ
PE=3 SV=1
Length = 118
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 99 DLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNKELQFTKKMLSLDAKNY 154
+LQ ++ V +AK S HHRR V +KL +NKE T+K+ + A+ Y
Sbjct: 39 ELQKKVEKVITLAKKKS-----LHHRRQVFKKLFDENINKEQTVTQKLFTTTAEKY 89
>sp|Q8CF25|CS067_MOUSE UPF0575 protein C19orf67 homolog OS=Mus musculus PE=2 SV=2
Length = 301
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 79 NPGNYTVWHFRRQIIETLHTDLQDELAFVGRIAKSNSKNYQLWHHRRWVAEKLGTGAVNK 138
P YT HF R + + + +L+ + A S+ Y L + W E G G N
Sbjct: 161 TPAAYTASHFPRYLYKKMRWNLETTTEASSQGADSHVDYYFLCYRDTW--EDAGQGPANS 218
Query: 139 ELQFTKKMLSLDAKNYHAWSYRQWVLQALGGWEDELD 175
Q K WS +W+ LG ED+LD
Sbjct: 219 CPQIQK-----------LWSIGRWM--PLGPAEDDLD 242
>sp|Q21407|GPC1B_CAEEL Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog
K10B3.6 OS=Caenorhabditis elegans GN=K10B3.6 PE=2 SV=2
Length = 690
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 193 QRYFVVTRSPLLG------GLIAMRDSEVNFTIEAILGNPEN--ESPWRYLRGLYKDDTE 244
++ VV P+LG + ++ T AI+ P + E +RY+R +Y D +E
Sbjct: 20 EKIHVVGSLPVLGEWNPRKSFPLTKSTDEENTFHAIVSVPSSIKEFNFRYIRVMYLDPSE 79
Query: 245 SWINDPRMLLSVFESF 260
+ ++P M+LS +E+F
Sbjct: 80 NNTSEPIMVLSKWETF 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,247,167
Number of Sequences: 539616
Number of extensions: 4827533
Number of successful extensions: 10273
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10035
Number of HSP's gapped (non-prelim): 56
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)