BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023285
(284 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 123/184 (66%), Gaps = 6/184 (3%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
DG D+ +I L I+ K+ +GS+G +++ + +VA+K+L + + E + EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--TSLLKVAIDV 217
IM+++RH N+V F+GA T+PPNL IVTE+++RGS+Y LHK QL L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 218 SKGMNYLHQNN--IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMT-AETGTYRWM 274
+KGMNYLH N I+HRDLK+ NLL+D+ VKV DFG++R++A + + GT WM
Sbjct: 147 AKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWM 206
Query: 275 APEV 278
APEV
Sbjct: 207 APEV 210
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 125/184 (67%), Gaps = 6/184 (3%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
DG D+ +I L I+ K+ +GS+G +++ + +VA+K+L + + E + EF +EV
Sbjct: 28 DGDDM-DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVA 86
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--TSLLKVAIDV 217
IM+++RH N+V F+GA T+PPNL IVTE+++RGS+Y LHK QL L +A DV
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146
Query: 218 SKGMNYLHQNN--IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMT-AETGTYRWM 274
+KGMNYLH N I+HR+LK+ NLL+D+ VKV DFG++R++A + + + + GT WM
Sbjct: 147 AKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWM 206
Query: 275 APEV 278
APEV
Sbjct: 207 APEV 210
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D + WEI+A ++ + ++ SGS+G +YKG + +VA+K+LK E + F EV
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVA 84
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+ NL IVT++ S+Y LH Q+ FQ+ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH NIIHRD+K+ N+ + E VK+ DFG+A V+++ SG E TG+ WMAP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 277 EV 278
EV
Sbjct: 204 EV 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 61 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAP
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
Query: 277 EV 278
EV
Sbjct: 180 EV 181
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A +++ SG E +G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 277 EV 278
EV
Sbjct: 192 EV 193
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 115/183 (62%), Gaps = 5/183 (2%)
Query: 99 TDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEV 158
+D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMA 275
+GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMA
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 276 PEV 278
PEV
Sbjct: 180 PEV 182
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 115/183 (62%), Gaps = 5/183 (2%)
Query: 99 TDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEV 158
+D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A +
Sbjct: 61 GVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMA 275
+GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMA
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 276 PEV 278
PEV
Sbjct: 180 PEV 182
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 111/182 (60%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A +++ SG E +G+ WMAP
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 277 EV 278
EV
Sbjct: 192 EV 193
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAP
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
Query: 277 EV 278
EV
Sbjct: 204 EV 205
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 25 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 84 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAP
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
Query: 277 EV 278
EV
Sbjct: 203 EV 204
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 5/180 (2%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV ++
Sbjct: 2 SDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++GM
Sbjct: 61 RKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAPEV 278
+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAPEV
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 85 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A +++ SG E +G+ WMAP
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
Query: 277 EV 278
EV
Sbjct: 204 EV 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY 159
D +D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV
Sbjct: 18 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++RK RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++
Sbjct: 77 VLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAP 276
GM+YLH +IIHRDLK+ N+ + E+ VK+ DFG+A +++ SG E +G+ WMAP
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
Query: 277 EV 278
EV
Sbjct: 196 EV 197
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 112/179 (62%), Gaps = 5/179 (2%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
K RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAPEV 278
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 57
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 58 KKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKWTAPE 175
Query: 278 VAF 280
A
Sbjct: 176 AAL 178
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 114/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+KIRH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 316
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 317 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 434
Query: 278 VAFTFFF 284
A F
Sbjct: 435 AALYGRF 441
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 60
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 61 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 178
Query: 278 VAF 280
A
Sbjct: 179 AAL 181
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 278 VAF 280
A
Sbjct: 352 AAL 354
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 278 VAF 280
A
Sbjct: 352 AAL 354
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 113/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 58
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 59 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 176
Query: 278 VAF 280
A
Sbjct: 177 AAL 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 5/179 (2%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
K RH N++ F+G T P L IVT++ S+Y LH + F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAPEV 278
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A V+++ SG E +G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 5/179 (2%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI Q+ + ++ SGS+G +YKG + +VA+K+L + L+ F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
K RH N++ F+G T+P L IVT++ S+Y LH + F++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-SGVMTAE--TGTYRWMAPEV 278
YLH +IIHRDLK+ N+ + E+ VK+ DFG+A +++ SG E +G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV 177
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M +GS+ DFL + G + +L L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEWTARQGAKFPIKWTAPE 182
Query: 278 VAF 280
A
Sbjct: 183 AAL 185
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 98 PTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFS 155
P+ D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 61
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVA 214
+E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 121
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---Y 271
+S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 180
Query: 272 RWMAPE 277
+W APE
Sbjct: 181 KWTAPE 186
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M +GS+ DFL + G + +L L+ ++ ++ G
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 182
Query: 278 VAF 280
A
Sbjct: 183 AAL 185
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IV E+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IV E+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IV E+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 278 VAF 280
A
Sbjct: 352 AAL 354
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 112/182 (61%), Gaps = 10/182 (5%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M+
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 57
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKGM 221
K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ GM
Sbjct: 58 KLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 116
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEV 278
Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 117 AYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPEA 175
Query: 279 AF 280
A
Sbjct: 176 AL 177
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++G + DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVM 234
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IVTE+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 235 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 293
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+ R+ + TA G +W APE
Sbjct: 294 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRL-IEDNEYTARQGAKFPIKWTAPE 352
Query: 278 VAF 280
A
Sbjct: 353 AAL 355
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IV E+M++GS+ DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 19/205 (9%)
Query: 86 LLIESSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKP 143
L + SPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK
Sbjct: 10 LYFQGSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE 61
Query: 144 ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QK 202
+ + E EF +E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + +
Sbjct: 62 DTMEVE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 118
Query: 203 GVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG 262
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+
Sbjct: 119 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GD 177
Query: 263 VMTAETGT---YRWMAPE-VAFTFF 283
TA G +W APE +A+ F
Sbjct: 178 TYTAHAGAKFPIKWTAPESLAYNKF 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 19/201 (9%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN 147
SSPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK + +
Sbjct: 6 SSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 148 TEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQ 206
E EF +E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + +
Sbjct: 58 VE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 267 ETGT---YRWMAPE-VAFTFF 283
G +W APE +A+ F
Sbjct: 174 HAGAKFPIKWTAPESLAYNKF 194
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 19/201 (9%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN 147
SSPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK + +
Sbjct: 6 SSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 148 TEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQ 206
E EF +E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + +
Sbjct: 58 VE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 114
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 267 ETGT---YRWMAPE-VAFTFF 283
G +W APE +A+ F
Sbjct: 174 HAGAKFPIKWTAPESLAYNKF 194
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 19/201 (9%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN 147
SSPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK + +
Sbjct: 6 SSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 148 TEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQ 206
E EF +E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + +
Sbjct: 58 VE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTA 173
Query: 267 ETGT---YRWMAPE-VAFTFF 283
G +W APE +A+ F
Sbjct: 174 HAGAKFPIKWTAPESLAYNKF 194
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 18/194 (9%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN 147
SSPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK + +
Sbjct: 6 SSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 148 TEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQ 206
E EF +E +M++I+H N+VQ +G CTR P I+TEFM G++ D+L + +
Sbjct: 58 VE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 267 ETGT---YRWMAPE 277
G +W APE
Sbjct: 174 HAGAKFPIKWTAPE 187
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 11/193 (5%)
Query: 98 PTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFS 155
P+ D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFL 58
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVA 214
+E +M++I+H N+VQ +G CTR P I+ EFM G++ D+L + + LL +A
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---Y 271
+S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 177
Query: 272 RWMAPE-VAFTFF 283
+W APE +A+ F
Sbjct: 178 KWTAPESLAYNKF 190
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAP 179
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 180 ESLAYNKF 187
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 182 ESLAYNKF 189
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 183
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 184 ESLAYNKF 191
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 183
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 184 ESLAYNKF 191
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 182 ESLAYNKF 189
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 10/181 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E 277
E
Sbjct: 182 E 182
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 10/181 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E 277
E
Sbjct: 182 E 182
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + L++E K+ G +G+++ GT+ + VAIK LKP ++ E F QE +M
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF-QLTSLLKVAIDVSKG 220
+K+RH+ +VQ + P + IV E+M++G + DFL + G + +L L+ +A ++ G
Sbjct: 68 KKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N +HRDL+ AN+L+ EN V KVADFG+AR+ + TA G +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 185
Query: 278 VAFTFFF 284
A F
Sbjct: 186 AALYGRF 192
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAP 183
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 184 ESLAYNKF 191
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 63
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAP 182
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 183 ESLAYNKF 190
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN 147
SSPN D WE++ + ++ K+ G YG++Y+G + S VA+K LK + +
Sbjct: 6 SSPN--------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 148 TEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQ 206
E EF +E +M++I+H N+VQ +G CTR P I+ EFM G++ D+L + +
Sbjct: 58 VE---EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 114
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL +A +S M YL + N IHRDL N L+ EN +VKVADFG++R+ TA
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTA 173
Query: 267 ETGT---YRWMAPE 277
G +W APE
Sbjct: 174 HAGAKFPIKWTAPE 187
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G +G++Y+G + S VA+K LK + + E EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAP 179
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 180 ESLAYNKF 187
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 269
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHR+L N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 388
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 389 ESLAYNKF 396
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 266
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHR+L N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 385
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 386 ESLAYNKF 393
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 60
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+ EFM G++ D+L + + LL +A +S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAP 179
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 180 ESLAYNKF 187
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 308
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+TEFM G++ D+L + + LL +A +S
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHR+L N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 427
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 428 ESLAYNKF 435
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+ EFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 182 ESLAYNKF 189
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y+G + S VA+K LK + + E EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CTR P I+ EFM G++ D+L + + LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN +VKVADFG++R+ TA G +W AP
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 181
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 182 ESLAYNKF 189
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 11/188 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
D WE++ + ++ K+ G YG++Y G + S VA+K LK + + E EF +E +
Sbjct: 25 DKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAV 81
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
M++I+H N+VQ +G CT P IVTE+M G++ D+L + + LL +A +S
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
M YL + N IHRDL N L+ EN VVKVADFG++R+ TA G +W AP
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAP 200
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 201 ESLAYNTF 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + LK+E K+ +G +G+++ TY +VA+K +KP ++ E F E +M
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 64
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ-LTSLLKVAIDVSKG 220
+ ++H +V+ T+ P + I+TEFMA+GS+ DFL +G Q L L+ + +++G
Sbjct: 65 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ Q N IHRDL+ AN+L+ + V K+ADFG+ARV + E + +W APE
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 183
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + LK+E K+ +G +G+++ TY +VA+K +KP ++ E F E +M
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 237
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ-LTSLLKVAIDVSKG 220
+ ++H +V+ T+ P + I+TEFMA+GS+ DFL +G Q L L+ + +++G
Sbjct: 238 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ Q N IHRDL+ AN+L+ + V K+ADFG+ARV + E + +W APE
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRK 163
W ID +L ++ SG +G ++ G + +++ VAIK ++ ++ E +F +E +M K
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMK 59
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H +VQ G C +C+VTEFM G + D+L Q+G+F +LL + +DV +GM Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEVAF 280
L + +IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +PEV F
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEV-F 177
Query: 281 TF 282
+F
Sbjct: 178 SF 179
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 113/187 (60%), Gaps = 10/187 (5%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
DVWEI + L++ ++ +G +G+++ GT+ + +VAIK LKP ++ E F +E IM
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIM 58
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKG-VFQLTSLLKVAIDVSKG 220
+K++H +VQ + P + IVTE+M +GS+ DFL +G +L +L+ +A V+ G
Sbjct: 59 KKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPE 277
M Y+ + N IHRDL++AN+L+ + K+ADFG+AR+ + TA G +W APE
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIKWTAPE 176
Query: 278 VAFTFFF 284
A F
Sbjct: 177 AALYGRF 183
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 123 bits (309), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 14/178 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + LK+E K+ +G +G+++ TY +VA+K +KP ++ E F E +M
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 231
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ-LTSLLKVAIDVSKG 220
+ ++H +V+ T+ P + I+TEFMA+GS+ DFL +G Q L L+ + +++G
Sbjct: 232 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
M ++ Q N IHRDL+ AN+L+ + V K+ADFG+ARV A+ + +W APE
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI--------KWTAPEA 340
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 9/186 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVY 159
G+ W ID +L ++ SG +G ++ G + +++ VAIK ++ ++ E +F +E
Sbjct: 1 GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAE 57
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M K+ H +VQ G C +C+V EFM G + D+L Q+G+F +LL + +DV +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAP 276
GM YL + +IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +P
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 176
Query: 277 EVAFTF 282
EV F+F
Sbjct: 177 EV-FSF 181
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 107/180 (59%), Gaps = 7/180 (3%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYC-SQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WEI + +K+ ++ +G +G+++ G Y S +VA+K LKP T ++ F +E +M
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKP---GTMSVQAFLEEANLM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKG-VFQLTSLLKVAIDVSKG 220
+ ++H +V+ TR + I+TE+MA+GS+ DFL +G L L+ + +++G
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M Y+ + N IHRDL+ AN+L+ E+ + K+ADFG+ARV + E + +W APE
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 182
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
ID +L ++ SG +G ++ G + +++ VAIK ++ ++ E +F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 60
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H +VQ G C +C+V EFM G + D+L Q+G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEVAFTF 282
+ ++IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +PEV F+F
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEV-FSF 178
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 106/179 (59%), Gaps = 7/179 (3%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKGTYC-SQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
WEI + +K+ K+ +G +G+++ G Y S +VA+K LKP T ++ F +E +M+
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKP---GTMSVQAFLEEANLMK 62
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK-QKGVFQLTSLLKVAIDVSKGM 221
++H +V+ T+ + I+TEFMA+GS+ DFL + G L L+ + +++GM
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
Y+ + N IHRDL+ AN+L+ E+ + K+ADFG+ARV + E + +W APE
Sbjct: 123 AYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 181
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
ID +L ++ SG +G ++ G + +++ VAIK ++ ++ E +F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 60
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H +VQ G C +C+V EFM G + D+L Q+G+F +LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEVAFTF 282
+ +IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +PEV F+F
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEV-FSF 178
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
ID +L ++ SG +G ++ G + +++ VAIK ++ ++ E +F +E +M K+
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 58
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H +VQ G C +C+V EFM G + D+L Q+G+F +LL + +DV +GM YL
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEVAFTF 282
+ +IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +PEV F+F
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEV-FSF 176
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
ID +L ++ SG +G ++ G + +++ VAIK +K ++ + +F +E +M K+
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLS 80
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H +VQ G C +C+V EFM G + D+L Q+G+F +LL + +DV +GM YL
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT---YRWMAPEVAFTF 282
+ +IHRDL N L+ EN V+KV+DFG+ R T+ TGT +W +PEV F+F
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEV-FSF 198
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
W+I +QL+I + G +G +Y G + EVAI+++ E N + LK F +EV R+
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 165 RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
RH+NVV F+GAC PP+L I+T ++Y + K V + ++A ++ KGM YL
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
H I+H+DLK+ N+ D NG V + DFG+ + SGV+ A
Sbjct: 147 HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSI---SGVLQA 184
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
W ++ K+LK+ + G +GD+ G Y +VA+K +K N + F E +M ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 56
Query: 165 RHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMN 222
RH N+VQ +G L IVTE+MA+GS+ D+L + + V LLK ++DV + M
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
YL NN +HRDL N+L+ E+ V KV+DFG+ + +A S T +TG +W APE
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPE 169
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
W ++ K+LK+ + G +GD+ G Y +VA+K +K N + F E +M ++
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 62
Query: 165 RHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMN 222
RH N+VQ +G L IVTE+MA+GS+ D+L + + V LLK ++DV + M
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
YL NN +HRDL N+L+ E+ V KV+DFG+ + +A S T +TG +W APE
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEA 176
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
W ++ K+LK+ + G +GD+ G Y +VA+K +K N + F E +M ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 71
Query: 165 RHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMN 222
RH N+VQ +G L IVTE+MA+GS+ D+L + + V LLK ++DV + M
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
YL NN +HRDL N+L+ E+ V KV+DFG+ + +A S T +TG +W APE
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEA 185
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
W ++ K+LK+ + G +GD+ G Y +VA+K +K N + F E +M ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK----NDATAQAFLAEASVMTQL 243
Query: 165 RHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMN 222
RH N+VQ +G L IVTE+MA+GS+ D+L + + V LLK ++DV + M
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
YL NN +HRDL N+L+ E+ V KV+DFG+ + +A S T +TG +W APE
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASS---TQDTGKLPVKWTAPEA 357
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRK 163
WEID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
L +HRDL N L+++ GVVKV+DFG++R ++ + RW PEV
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEV 177
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 91 SPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTE 149
S N G WEID K L ++ +G +G + G + Q +VAIK++K ++ +
Sbjct: 5 SKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED 64
Query: 150 MLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTS 209
EF +E +M + H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ
Sbjct: 65 ---EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 121
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETG 269
LL++ DV + M YL +HRDL N L+++ GVVKV+DFG++R ++
Sbjct: 122 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181
Query: 270 TY--RWMAPEV 278
+ RW PEV
Sbjct: 182 KFPVRWSPPEV 192
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 6/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVY 159
G WEID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E
Sbjct: 6 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 62
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV +
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
M YL +HRDL N L+++ GVVKV+DFG++R ++ + RW PE
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 278 V 278
V
Sbjct: 183 V 183
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 6/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVY 159
G WEID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
M YL +HRDL N L+++ GVVKV+DFG++R ++ + RW PE
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPE 191
Query: 278 V 278
V
Sbjct: 192 V 192
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRK 163
WEID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E +M
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 59
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV + M Y
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
L +HRDL N L+++ GVVKV+DFG++R ++ + RW PEV
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 176
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRK 163
WEID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
L +HRDL N L+++ GVVKV+DFG++R ++ + RW PEV
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 177
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 16/192 (8%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLK--PECVNTEMLKEFSQEVYIMRK 163
EID +L +E + G +G +Y+ + EVA+K + P+ ++ ++ QE +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
++H N++ G C + PNLC+V EF G + L ++ L+ A+ +++GMNY
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNY 120
Query: 224 LHQN---NIIHRDLKTANLLM---DENG-----VVKVADFGVARVQAQSGVMTAETGTYR 272
LH IIHRDLK++N+L+ ENG ++K+ DFG+AR ++ M+A G Y
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYA 179
Query: 273 WMAPEVAFTFFF 284
WMAPEV F
Sbjct: 180 WMAPEVIRASMF 191
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKP--ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G +G +YKG + VA+K L + E+ ++F QE+ +M K +H+N+V+ +G
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL--KVAIDVSKGMNYLHQNNIIHR 232
+ +LC+V +M GS+ D L G L+ + K+A + G+N+LH+N+ IHR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 233 DLKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPEV 278
D+K+AN+L+DE K++DFG+AR AQ+ + + GT +MAPE
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 100/169 (59%), Gaps = 7/169 (4%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKP--ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G +G +YKG + VA+K L + E+ ++F QE+ +M K +H+N+V+ +G
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL--KVAIDVSKGMNYLHQNNIIHR 232
+ +LC+V +M GS+ D L G L+ + K+A + G+N+LH+N+ IHR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 233 DLKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPEV 278
D+K+AN+L+DE K++DFG+AR AQ+ + GT +MAPE
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 99/169 (58%), Gaps = 7/169 (4%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKP--ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G +G +YKG + VA+K L + E+ ++F QE+ +M K +H+N+V+ +G
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL--KVAIDVSKGMNYLHQNNIIHR 232
+ +LC+V +M GS+ D L G L+ + K+A + G+N+LH+N+ IHR
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 151
Query: 233 DLKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPEV 278
D+K+AN+L+DE K++DFG+AR AQ + GT +MAPE
Sbjct: 152 DIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 63
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 64 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 64
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 65 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 57
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 58 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 71
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 72 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 70
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 71 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 68 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 72
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 73 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
ID K L ++ +G +G + G + Q +VAIK++K ++ + EF +E +M +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLS 57
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H+ +VQ G CT+ + I+TE+MA G + ++L + + FQ LL++ DV + M YL
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
+HRDL N L+++ GVVKV+DFG++R ++ + RW PEV
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIM 161
D WE+ + LK+ ++ +G G+++ G Y +VA+K LK ++ + F E +M
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKG 220
++++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++G
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
M ++ + N IHRDL+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEA 181
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 277 EVAFTFFF 284
E T F
Sbjct: 194 ESLKTRTF 201
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 277 EVAFTFFF 284
E T F
Sbjct: 184 ESLKTRTF 191
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 277 EVAFTFFF 284
E T F
Sbjct: 194 ESLKTRTF 201
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 277 EVAFTFFF 284
E T F
Sbjct: 184 ESLKTRTF 191
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 277 EVAFTFFF 284
E T F
Sbjct: 184 ESLKTRTF 191
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 277 EVAFTFFF 284
E T F
Sbjct: 188 ESLKTRTF 195
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVN-TEMLKEFSQEVYI 160
I K L++ K+ GS+G + +G + + VA+K LKP+ ++ E + +F +EV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H+N+++ G PP + +VTE GS+ D L K +G F L +L + A+ V++G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG---VMTAETGT-YRWMAP 276
M YL IHRDL NLL+ +VK+ DFG+ R Q+ VM + W AP
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 277 EVAFTFFF 284
E T F
Sbjct: 188 ESLKTRTF 195
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 103/178 (57%), Gaps = 8/178 (4%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRK 163
WE+ + LK+ ++ +G +G+++ G Y +VA+K LK ++ + F E +M++
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQ 60
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKGMN 222
++H+ +V+ T+ P + I+TE+M GS+ DFL G+ + LL +A +++GM
Sbjct: 61 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEV 278
++ + N IHR+L+ AN+L+ + K+ADFG+AR+ + E + +W APE
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 177
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFL 59
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +W
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 274 MAPE 277
MAPE
Sbjct: 179 MAPE 182
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 99 TDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKE 153
+ T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREK 60
Query: 154 FSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKV 213
F QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILY 119
Query: 214 AIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY-- 271
A +S + YL +HRD+ N+L+ N VK+ DFG++R S A G
Sbjct: 120 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 272 RWMAPE 277
+WMAPE
Sbjct: 180 KWMAPE 185
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFL 59
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +W
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 274 MAPE 277
MAPE
Sbjct: 179 MAPE 182
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQ 156
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F Q
Sbjct: 30 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQ 88
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 147
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWM 274
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +WM
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 275 APE 277
APE
Sbjct: 208 APE 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKP--ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K G +G +YKG + VA+K L + E+ ++F QE+ + K +H+N+V+ +G
Sbjct: 29 KXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLT--SLLKVAIDVSKGMNYLHQNNIIHR 232
+ +LC+V + GS+ D L G L+ K+A + G+N+LH+N+ IHR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 233 DLKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPEV 278
D+K+AN+L+DE K++DFG+AR AQ + GT + APE
Sbjct: 149 DIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEA 197
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQ 156
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F Q
Sbjct: 7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQ 65
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 124
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWM 274
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +WM
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 275 APE 277
APE
Sbjct: 185 APE 187
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFL 61
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +W
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 274 MAPE 277
MAPE
Sbjct: 181 MAPE 184
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFL 439
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +W
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 274 MAPE 277
MAPE
Sbjct: 559 MAPE 562
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFL 59
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ N VK+ DFG++R S A G +W
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 274 MAPE 277
MAPE
Sbjct: 179 MAPE 182
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVY 159
+EI +++++ + G +GD+++G Y S E VAIK K C + + ++F QE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEAL 60
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A +S
Sbjct: 61 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
+ YL +HRD+ N+L+ N VK+ DFG++R S A G +WMAPE
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYI 160
EID +KIE + +G +G++ +G + VAIK LK + +EF E I
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASI 70
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G T + I+TEFM G++ FL G F + L+ + ++ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY------RWM 274
M YL + + +HRDL N+L++ N V KV+DFG++R ++ ET + RW
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 275 APE-VAFTFF 283
APE +AF F
Sbjct: 191 APEAIAFRKF 200
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
D W ++ + L + ++ G++G+++ G + VA+K + E + ++ +F QE I
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARI 165
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
+++ H N+V+ IG CT+ + IV E + G FL + ++ +LL++ D + G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETG----TYRWMAP 276
M YL IHRDL N L+ E V+K++DFG++R +A GV A G +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTAP 284
Query: 277 EV 278
E
Sbjct: 285 EA 286
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
D W ++ + L + ++ G++G+++ G + VA+K + E + ++ +F QE I
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARI 165
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
+++ H N+V+ IG CT+ + IV E + G FL + ++ +LL++ D + G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETG----TYRWMAP 276
M YL IHRDL N L+ E V+K++DFG++R +A GV A G +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAP 284
Query: 277 EV 278
E
Sbjct: 285 EA 286
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFL 59
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ VK+ DFG++R S A G +W
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 274 MAPE 277
MAPE
Sbjct: 179 MAPE 182
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFS 155
T +EI +++++ + G +GD+++G Y S E VAIK K C + + ++F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFL 439
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
QE MR+ H ++V+ IG T P + I+ E G + FL +K L SL+ A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RW 273
+S + YL +HRD+ N+L+ VK+ DFG++R S A G +W
Sbjct: 499 QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 558
Query: 274 MAPE 277
MAPE
Sbjct: 559 MAPE 562
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 16/179 (8%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
ID K++++E V G++G + K + +++VAIK ++ E + E Q + ++ H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQ----LSRVNH 61
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTS--LLKVAIDVSKGMNYL 224
N+V+ GAC P +C+V E+ GS+Y+ LH + + T+ + + S+G+ YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 225 HQ---NNIIHRDLKTANLLMDENG-VVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
H +IHRDLK NLL+ G V+K+ DFG A +Q MT G+ WMAPEV
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEV 175
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGS-----YGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
EI+A ++ IE + SG YG L VAIK LK + ++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR-RDFLSEASI 103
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G TR IVTE+M GS+ FL G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETG---TYRWMAP 276
M YL +HRDL N+L+D N V KV+DFG++RV + TG RW AP
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 277 E-VAFTFF 283
E +AF F
Sbjct: 224 EAIAFRTF 231
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 16/179 (8%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
ID K++++E V G++G + K + +++VAIK ++ E + E Q + ++ H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQ----LSRVNH 60
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTS--LLKVAIDVSKGMNYL 224
N+V+ GAC P +C+V E+ GS+Y+ LH + + T+ + + S+G+ YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 225 HQ---NNIIHRDLKTANLLMDENG-VVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
H +IHRDLK NLL+ G V+K+ DFG A +Q MT G+ WMAPEV
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEV 174
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYI 160
EID +KIE + +G +G++ +G + VAIK LK + +EF E I
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASI 68
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G T + I+TEFM G++ FL G F + L+ + ++ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY------RWM 274
M YL + + +HRDL N+L++ N V KV+DFG++R ++ T + RW
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 275 APE-VAFTFF 283
APE +AF F
Sbjct: 189 APEAIAFRKF 198
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGS-----YGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
EI+A ++ IE + SG YG L VAIK LK + ++F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR-RDFLSEASI 103
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G TR IVTE+M GS+ FL G F + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETG---TYRWMAP 276
M YL +HRDL N+L+D N V KV+DFG++RV + TG RW AP
Sbjct: 164 MRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 277 E-VAFTFF 283
E +AF F
Sbjct: 224 EAIAFRTF 231
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY---CSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
EIDA +KIE + G +G++ G +E VAIK LK + + ++F E I
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 83
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N++ G T+ + I+TE+M GS+ FL K G F + L+ + + G
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL + +HRDL N+L++ N V KV+DFG++RV T G RW AP
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 204 EAIAYRKF 211
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY---CSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
EIDA +KIE + G +G++ G +E VAIK LK + + ++F E I
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 62
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N++ G T+ + I+TE+M GS+ FL K G F + L+ + + G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL + +HRDL N+L++ N V KV+DFG++RV T G RW AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 183 EAIAYRKF 190
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY---CSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
EIDA +KIE + G +G++ G +E VAIK LK + + ++F E I
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 68
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N++ G T+ + I+TE+M GS+ FL K G F + L+ + + G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL + +HRDL N+L++ N V KV+DFG++RV T G RW AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 189 EAIAYRKF 196
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 14/172 (8%)
Query: 118 VASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI-RHKNVVQFIG 174
V +G+YG +YKG + Q AIKV+ V + +E QE+ +++K H+N+ + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 175 ACTR--PP----NLCIVTEFMARGSIYDFLHKQKG-VFQLTSLLKVAIDVSKGMNYLHQN 227
A + PP L +V EF GS+ D + KG + + + ++ +G+++LHQ+
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 228 NIIHRDLKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+IHRD+K N+L+ EN VK+ DFGV A++ G GT WMAPEV
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG+ARV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKGTY-----CSQEVAIKVLKPE 144
P+ E P + EI+A + IE + +G +G++ G VAIK LK
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG 61
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N++ G T+ + IVTE+M GS+ FL K G
Sbjct: 62 YTEKQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ 120
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + +S GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 180
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW APE +AF F
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKF 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY---CSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
EID +KIE + +G +G++ G +E VAIK LK + ++F E I
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASI 87
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H NV+ G T+ + I+TEFM GS+ FL + G F + L+ + ++ G
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV---QAQSGVMTAETG---TYRWM 274
M YL N +HRDL N+L++ N V KV+DFG++R T+ G RW
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 275 APEV 278
APE
Sbjct: 208 APEA 211
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY-----CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
E+DA +KIE + +G +G++ G VAIK LK + ++F E I
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR-RDFLCEASI 97
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H NVV G TR + IV EFM G++ FL K G F + L+ + ++ G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL +HRDL N+L++ N V KV+DFG++RV V T G RW AP
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 277 E 277
E
Sbjct: 218 E 218
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ-EVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
E+ +++ + ++ SG +G + G + Q +VA+K++K ++ + EF QE M K+
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---EFFQEAQTMMKL 60
Query: 165 RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
H +V+F G C++ + IVTE+++ G + ++L + + LL++ DV +GM +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPEVAFTF 282
+ IHRDL N L+D + VKV+DFG+ R +++ + +W APEV F +
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV-FHY 179
Query: 283 F 283
F
Sbjct: 180 F 180
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG+ RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 23 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 83 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 141
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 201
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 202 AYTTRGGKIPIRWTSPEAIAYRKF 225
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE+M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
E+DA + I+ V +G +G++ G + VAIK LK + ++F E I
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASI 87
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G T+ + IVTE+M GS+ FL K F + L+ + ++ G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL +HRDL N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 208 EAIAYRKF 215
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
E+DA + I+ V +G +G++ G + VAIK LK + ++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASI 70
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G T+ + IVTE+M GS+ FL K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL +HRDL N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 191 EAIAYRKF 198
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 118 VASGSYGDLYKGTYCSQE------VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQ 171
+ +G +G++YKG + VAIK LK + + +F E IM + H N+++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHNIIR 110
Query: 172 FIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
G ++ + I+TE+M G++ FL ++ G F + L+ + ++ GM YL N +H
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETG----TYRWMAPEV 278
RDL N+L++ N V KV+DFG++RV T T RW APE
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEF 154
G+D + + + LK ++ G++G + Y + VA+K L+ E L++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDF 58
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK 212
+E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGT 270
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 271 YR--WMAPE 277
W APE
Sbjct: 179 SPIFWYAPE 187
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 92 PNCIEIPTDGTDVW--EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPE 144
P+ E PT + E+DA + I+ V +G +G++ G + VAIK LK
Sbjct: 25 PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
+ ++F E IM + H N+++ G T+ + IVTE M GS+ FL K
Sbjct: 85 YTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
Query: 205 FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSG 262
F + L+ + ++ GM YL +HRDL N+L++ N V KV+DFG++RV
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 VMTAETG--TYRWMAPE-VAFTFF 283
T G RW +PE +A+ F
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEF 154
G+D + + + LK ++ G++G + Y + VA+K L+ E L++F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDF 58
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK 212
+E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGT 270
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178
Query: 271 YR--WMAPE 277
W APE
Sbjct: 179 SPIFWYAPE 187
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY---CSQE--VAIKVLKPECVNTEMLKEFSQEVYI 160
EID +KIE + +G +G++ G +E VAIK LK + ++F E I
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASI 61
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H NV+ G T+ + I+TEFM GS+ FL + G F + L+ + ++ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV---QAQSGVMTAETG---TYRWM 274
M YL N +HR L N+L++ N V KV+DFG++R T+ G RW
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 275 APEV 278
APE
Sbjct: 182 APEA 185
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 91 SPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNT 148
SP +++P ++ + + K+E ++ GS+G+++KG Q VAIK++ E
Sbjct: 5 SPVAVQVPGMQNNIADPEELFTKLE-RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED 63
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQL 207
E+ QE+ ++ + V ++ G+ + L I+ E++ GS D L FQ+
Sbjct: 64 EIEDI-QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI 122
Query: 208 TSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGV-MTA 266
++LK ++ KG++YLH IHRD+K AN+L+ E G VK+ADFGVA + +
Sbjct: 123 ATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 267 ETGTYRWMAPEV 278
GT WMAPEV
Sbjct: 180 FVGTPFWMAPEV 191
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK+L E + EF E
Sbjct: 37 ETELKRVKV---LGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEAL 92
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
IM + H ++V+ +G C P + +VT+ M G + +++H+ K LL + ++K
Sbjct: 93 IMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 151
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GM YL + ++HRDL N+L+ VK+ DFG+AR ++ A+ G +WMA
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 277 E 277
E
Sbjct: 212 E 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNT-EMLKEFSQEVYIMRKIRHKNVVQFI 173
++ GS+G +Y + S+ VAIK + + E ++ +EV ++K+RH N +Q+
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
G R +V E+ GS D L K Q + V +G+ YLH +N+IHRD
Sbjct: 121 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K N+L+ E G+VK+ DFG A + A + GT WMAPEV
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEV 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNT-EMLKEFSQEVYIMRKIRHKNVVQFI 173
++ GS+G +Y + S+ VAIK + + E ++ +EV ++K+RH N +Q+
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
G R +V E+ GS D L K Q + V +G+ YLH +N+IHRD
Sbjct: 82 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K N+L+ E G+VK+ DFG A + A + GT WMAPEV
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEV 182
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 13 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 71
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 205 F-------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
F L L+ + V+KGM +L IHRDL N+L+ E VVK+ D
Sbjct: 132 FVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 252 FGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
FG+AR + V + +WMAPE F
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 22/184 (11%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-----KPECVNTEMLKEFSQEVYIMRK 163
+++ E ++ G +G ++KG + VAIK L + E E +EF +EV+IM
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H N+V+ G PP + V EF+ G +Y L + + + L++ +D++ G+ Y
Sbjct: 80 LNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 224 LHQNN--IIHRDLKTANLL---MDENGVV--KVADFGVAR--VQAQSGVMTAETGTYRWM 274
+ N I+HRDL++ N+ +DEN V KVADFG+++ V + SG++ G ++WM
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL----GNFQWM 193
Query: 275 APEV 278
APE
Sbjct: 194 APET 197
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 97 IPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEM 150
+P ++ + + + LK ++ G++G + Y + VA+K L+ E
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEH 72
Query: 151 LKEFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLT 208
L++F +E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTA 266
LL+ + KGM YL IHRDL T N+L++ VK+ DFG+ +V Q +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 267 ETGTYR--WMAPE 277
E G W APE
Sbjct: 193 EPGESPIFWYAPE 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK+L E + EF E
Sbjct: 14 ETELKRVKV---LGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEAL 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
IM + H ++V+ +G C P + +VT+ M G + +++H+ K LL + ++K
Sbjct: 70 IMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GM YL + ++HRDL N+L+ VK+ DFG+AR ++ A+ G +WMA
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 97 IPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEM 150
+P ++ + + + LK ++ G++G + Y + VA+K L+ E
Sbjct: 15 VPRGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEH 72
Query: 151 LKEFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLT 208
L++F +E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTA 266
LL+ + KGM YL IHRDL T N+L++ VK+ DFG+ +V Q +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 267 ETGTYR--WMAPE 277
E G W APE
Sbjct: 193 EPGESPIFWYAPE 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKG-----TYCSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
E+DA + I+ V +G +G++ G + VAIK LK + ++F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASI 70
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
M + H N+++ G T+ + IVTE M GS+ FL K F + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETG--TYRWMAP 276
M YL +HRDL N+L++ N V KV+DFG++RV T G RW +P
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 277 E-VAFTFF 283
E +A+ F
Sbjct: 191 EAIAYRKF 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-----KPECVNTEMLKEFSQEVYIMRK 163
+++ E ++ G +G ++KG + VAIK L + E E +EF +EV+IM
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H N+V+ G PP + V EF+ G +Y L + + + L++ +D++ G+ Y
Sbjct: 80 LNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 224 LHQNN--IIHRDLKTANLL---MDENGVV--KVADFGVAR--VQAQSGVMTAETGTYRWM 274
+ N I+HRDL++ N+ +DEN V KVADFG ++ V + SG++ G ++WM
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLL----GNFQWM 193
Query: 275 APEV 278
APE
Sbjct: 194 APET 197
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 20/191 (10%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCS---QEVAIKVLKPECVNTEMLKEFSQEVYIM 161
W I+ +++ + SG+ + + YC+ ++VAIK + E T M E +E+ M
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSM-DELLKEIQAM 67
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL--------HKQKGVFQLTSLLKV 213
+ H N+V + + L +V + ++ GS+ D + HK GV +++ +
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS-GVLDESTIATI 126
Query: 214 AIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------ 267
+V +G+ YLH+N IHRD+K N+L+ E+G V++ADFGV+ A G +T
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 268 TGTYRWMAPEV 278
GT WMAPEV
Sbjct: 187 VGTPCWMAPEV 197
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 20/191 (10%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCS---QEVAIKVLKPECVNTEMLKEFSQEVYIM 161
W I+ +++ + SG+ + + YC+ ++VAIK + E T M E +E+ M
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRINLEKCQTSM-DELLKEIQAM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL--------HKQKGVFQLTSLLKV 213
+ H N+V + + L +V + ++ GS+ D + HK GV +++ +
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKS-GVLDESTIATI 121
Query: 214 AIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------ 267
+V +G+ YLH+N IHRD+K N+L+ E+G V++ADFGV+ A G +T
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 268 TGTYRWMAPEV 278
GT WMAPEV
Sbjct: 182 VGTPCWMAPEV 192
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 2 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++TEF G++ +L ++
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNE 120
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +L + + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F-----------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
F L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG
Sbjct: 130 FVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 254 VAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
+AR + V + +WMAPE F
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIF 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 14/191 (7%)
Query: 99 TDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLK 152
++ D + + + LK ++ G++G + Y + VA+K L+ E L+
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLR 59
Query: 153 EFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSL 210
+F +E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K L
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
Query: 211 LKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAET 268
L+ + KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 269 GTYR--WMAPE 277
G W APE
Sbjct: 180 GESPIFWYAPE 190
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 91
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 273 --WMAPE 277
W APE
Sbjct: 212 IFWYAPE 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L + E L++F +
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFER 64
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 273 --WMAPE 277
W APE
Sbjct: 185 IFWYAPE 191
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 66
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 273 --WMAPE 277
W APE
Sbjct: 187 IFWYAPE 193
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
++ GS+G++YKG + + VAIK++ E E+ QE+ ++ + + ++ G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYITRYFG 84
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ + L I+ E++ GS D L + G + T + + ++ KG++YLH IHRD+
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
K AN+L+ E G VK+ADFGVA + + GT WMAPEV
Sbjct: 143 KAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 187
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 58
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 273 --WMAPE 277
W APE
Sbjct: 179 IFWYAPE 185
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 65
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 273 --WMAPE 277
W APE
Sbjct: 186 IFWYAPE 192
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 60
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 273 --WMAPE 277
W APE
Sbjct: 181 IFWYAPE 187
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 67
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 273 --WMAPE 277
W APE
Sbjct: 188 IFWYAPE 194
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 59
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 273 --WMAPE 277
W APE
Sbjct: 180 IFWYAPE 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-----KPECVNTEMLKEFSQEVYIMRK 163
+++ E ++ G +G ++KG + VAIK L + E E +EF +EV+IM
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
+ H N+V+ G PP + V EF+ G +Y L + + + L++ +D++ G+ Y
Sbjct: 80 LNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 224 LHQNN--IIHRDLKTANLL---MDENGVV--KVADFGVAR--VQAQSGVMTAETGTYRWM 274
+ N I+HRDL++ N+ +DEN V KVADF +++ V + SG++ G ++WM
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLL----GNFQWM 193
Query: 275 APEV 278
APE
Sbjct: 194 APET 197
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIF 223
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 63
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ EF+ GS+ ++L K K LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 273 --WMAPE 277
W APE
Sbjct: 184 IFWYAPE 190
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 48 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 106
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 107 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 166
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 167 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +L + + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F-----------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
F L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG
Sbjct: 130 FVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 254 VAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
+AR + V + +WMAPE F
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIF 219
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 13 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 71
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 205 F---------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 132 FVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 191
Query: 250 ADFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 16 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 74 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 193 DFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPECVNT 148
+P D + WE +LK+ + G++G + + T + VA+K+LK ++
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGVF-- 205
E S+ ++ H NVV +GACT+P L ++TEF G++ +L ++ F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 206 -------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADF 252
L L+ + V+KGM +L IHRDL N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 253 GVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
G+AR + V + +WMAPE F
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 98 PTDGTDVWEIDAKQLKIECKVASGSYGDLY------KGTYCSQEVAIKVLKPECVNTEML 151
P D + + LK + G +G + +G ++VA+K LKPE +
Sbjct: 9 PATEVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH-I 67
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTS 209
+ +E+ I+R + H+N+V++ G CT + ++ EF+ GS+ ++L K K L
Sbjct: 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMT 265
LK A+ + KGM+YL +HRDL N+L++ VK+ DFG+ + + V
Sbjct: 128 QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 266 AETGTYRWMAPE 277
W APE
Sbjct: 188 DRDSPVFWYAPE 199
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS+G+++KG + VAIK++ + +++ QE+ ++ + V ++ G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ + L I+ E++ GS D L + G T + + ++ KG++YLH IHRD+
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
K AN+L+ E+G VK+ADFGVA + + GT WMAPEV
Sbjct: 146 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
+D +K + + G++G + K + AIK +K E + + ++F+ E+ ++
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 70
Query: 163 KI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK---------------GVFQ 206
K+ H N++ +GAC L + E+ G++ DFL K +
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL A DV++GM+YL Q IHRDL N+L+ EN V K+ADFG++R Q T
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 267 ETGTYRWMAPE 277
RWMA E
Sbjct: 191 GRLPVRWMAIE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 95 IEIPTDGTDVWEIDAKQL--KIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEM 150
+++ T+ +D ++L K+E K+ GS+G+++KG + VAIK++ +
Sbjct: 11 VDLGTENLYFQSMDPEELFTKLE-KIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDE 68
Query: 151 LKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSL 210
+++ QE+ ++ + V ++ G+ + L I+ E++ GS D L + G T +
Sbjct: 69 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQI 126
Query: 211 LKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGV-MTAETG 269
+ ++ KG++YLH IHRD+K AN+L+ E+G VK+ADFGVA + + G
Sbjct: 127 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 270 TYRWMAPEV 278
T WMAPEV
Sbjct: 187 TPFWMAPEV 195
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
+D +K + + G++G + K + AIK +K E + + ++F+ E+ ++
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 80
Query: 163 KI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK---------------GVFQ 206
K+ H N++ +GAC L + E+ G++ DFL K +
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL A DV++GM+YL Q IHRDL N+L+ EN V K+ADFG++R Q T
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 267 ETGTYRWMAPE 277
RWMA E
Sbjct: 201 GRLPVRWMAIE 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPECVNT 148
+P D + WE +LK+ + G++G + + T + VA+K+LK ++
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGVF-- 205
E S+ ++ H NVV +GACT+P L ++TEF G++ +L ++ F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 206 -------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADF 252
L L+ + V+KGM +L IHRDL N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 253 GVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
G+AR + V + +WMAPE F
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIF 214
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 128 KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIV 185
+G ++VA+K LKPE + + +E+ I+R + H+N+V++ G CT + ++
Sbjct: 33 EGDNTGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 91
Query: 186 TEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG 245
EF+ GS+ ++L K K L LK A+ + KGM+YL +HRDL N+L++
Sbjct: 92 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH 151
Query: 246 VVKVADFGVARV----QAQSGVMTAETGTYRWMAPE 277
VK+ DFG+ + + V W APE
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 16 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 74 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 8 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 65
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 66 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 184
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 185 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 9 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 66
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 67 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 185
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 186 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 222
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 16 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 74 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 5 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 62
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 63 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 181
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 182 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 1 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 58
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 59 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 177
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS+G+++KG + VAIK++ + +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ + L I+ E++ GS D L + G T + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
K AN+L+ E+G VK+ADFGVA + + GT WMAPEV
Sbjct: 131 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 175
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS+G+++KG + VAIK++ + +++ QE+ ++ + V ++ G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ + L I+ E++ GS D L + G T + + ++ KG++YLH IHRD+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGV-MTAETGTYRWMAPEV 278
K AN+L+ E+G VK+ADFGVA + + GT WMAPEV
Sbjct: 131 KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 175
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +L + + G++G + + T + VA+K+LK
Sbjct: 12 HCERLPYDASK-WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 70
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 71 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 130
Query: 205 F--------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
F L L+ + V+KGM +L IHRDL N+L+ E VVK+
Sbjct: 131 FVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 251 DFGVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
DFG+AR + V + +WMAPE F
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 16 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL------- 198
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L
Sbjct: 74 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 199 --------HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
H + L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 192
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCS---------QEVAIKVLKPECV 146
E+P D WE+ +L + + G++G + +VA+K+LK +
Sbjct: 57 ELPEDPR--WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 114
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 115 EKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 206 -------------QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
QL+S L+ A V++GM YL IHRDL N+L+ E+ V+K+A
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 233
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 270
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 61
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L K K LL+
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHR+L T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 273 --WMAPE 277
W APE
Sbjct: 182 IFWYAPE 188
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPECVNT 148
+P D + WE +LK+ + G++G + + T + VA+K+LK ++
Sbjct: 5 RLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 63
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGVF-- 205
E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++ F
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 206 -------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADF 252
L L+ + V+KGM +L IHRDL N+L+ E VVK+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 253 GVAR--VQAQSGVMTAETG-TYRWMAPEVAF 280
G+AR + V + +WMAPE F
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIF 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
+D +K + + G++G + K + AIK +K E + + ++F+ E+ ++
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLC 77
Query: 163 KI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK---------------GVFQ 206
K+ H N++ +GAC L + E+ G++ DFL K +
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
LL A DV++GM+YL Q IHR+L N+L+ EN V K+ADFG++R Q T
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 267 ETGTYRWMAPE 277
RWMA E
Sbjct: 198 GRLPVRWMAIE 208
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
ID KQL K+ G+L+KG + ++ +KVLK +T ++F++E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 167 KNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKG-VFQLTSLLKVAIDVSKGMNY 223
NV+ +GAC P P+ ++T +M GS+Y+ LH+ V + +K A+D+++GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 224 LH--QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
LH + I L + ++++DE+ +++ V G M A W+APE
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA----WVAPEA 179
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 117 KVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GSYG +YK + Q VAIK + E E++KE S IM++ +VV++ G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS----IMQQCDSPHVVKYYG 91
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ + +L IV E+ GS+ D + + + + KG+ YLH IHRD+
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K N+L++ G K+ADFGVA ++ GT WMAPEV
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV 196
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
E L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 E-EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQ 156
D + + + LK ++ G++G + Y + VA+K L+ E L++F +
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFER 63
Query: 157 EVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
E+ I++ ++H N+V++ G C NL ++ E++ GS+ D+L LL+
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR 272
+ KGM YL IHRDL T N+L++ VK+ DFG+ +V Q + E G
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 273 --WMAPE 277
W APE
Sbjct: 184 IFWYAPE 190
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 119 ASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR 178
A G +G ++K ++ VA+K+ + + + EVY + ++H+N++QFIGA R
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 179 PP----NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN------- 227
+L ++T F +GS+ DFL + V L +A +++G+ YLH++
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 228 ---NIIHRDLKTANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
I HRD+K+ N+L+ N +ADFG+A +G + GT R+MAPEV
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKNTTNGRLPVKWMAPEALF 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ ++SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ ++SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 21 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 76
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 277 E 277
E
Sbjct: 196 E 196
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 24/188 (12%)
Query: 109 AKQLKI-ECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK 167
A+Q+ + EC V G YG++++G++ + VA+K+ +E E+Y +RH+
Sbjct: 36 ARQITLLEC-VGKGRYGEVWRGSWQGENVAVKIFSSR-DEKSWFRE--TELYNTVMLRHE 91
Query: 168 NVVQFIGA--CTR--PPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI + +R L ++T + GS+YD+L Q S L++ + ++ G+ +
Sbjct: 92 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAH 149
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVM-----TAETGT 270
LH + I HRDLK+ N+L+ +NG +AD G+A + +QS GT
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 271 YRWMAPEV 278
R+MAPEV
Sbjct: 210 KRYMAPEV 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 277 E 277
E
Sbjct: 192 E 192
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 277 E 277
E
Sbjct: 191 E 191
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 277 E 277
E
Sbjct: 192 E 192
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 20 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 75
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 76 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 277 E 277
E
Sbjct: 195 E 195
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+++A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 277 E 277
E
Sbjct: 192 E 192
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 24 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 79
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 80 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 277 E 277
E
Sbjct: 199 E 199
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 21 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 76
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 277 E 277
E
Sbjct: 196 E 196
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G +G + + VA+K+LK +
Sbjct: 15 ELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 72
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 73 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 191
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 192 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 8 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 63
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 64 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 277 E 277
E
Sbjct: 183 E 183
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G +G + + VA+K+LK +
Sbjct: 69 ELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 126
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 127 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 245
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAFTFFF 284
DFG+AR T +WMAPE F +
Sbjct: 246 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 39 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 94
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 95 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 277 E 277
E
Sbjct: 214 E 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G +G + + VA+K+LK +
Sbjct: 12 ELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 69
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 70 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 188
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 189 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 221
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G +G + + VA+K+LK +
Sbjct: 10 ELPEDPK--WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 67
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ E+ ++G++ ++L ++
Sbjct: 68 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIA 186
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 187 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 147 NTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ 206
+ E + F +EV +MR + H NV++FIG + L +TE++ G++ + +
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQ-----S 261
+ + A D++ GM YLH NIIHRDL + N L+ EN V VADFG+AR+
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 262 GVMTAE----------TGTYRWMAPEV 278
G+ + + G WMAPE+
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEM 193
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 114 IECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
+EC V G YG++++G++ + VA+K+ +E E+Y +RH+N++ FI
Sbjct: 13 LEC-VGKGRYGEVWRGSWQGENVAVKIFSSR-DEKSWFRE--TELYNTVMLRHENILGFI 68
Query: 174 GA--CTR--PPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH---- 225
+ +R L ++T + GS+YD+L Q S L++ + ++ G+ +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 226 ----QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVM-----TAETGTYRWMAP 276
+ I HRDLK+ N+L+ +NG +AD G+A + +QS GT R+MAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 277 EV 278
EV
Sbjct: 187 EV 188
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 114 IECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
+EC V G YG++++G++ + VA+K+ +E E+Y +RH+N++ FI
Sbjct: 13 LEC-VGKGRYGEVWRGSWQGENVAVKIFSSR-DEKSWFRE--TELYNTVMLRHENILGFI 68
Query: 174 GA--CTR--PPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH---- 225
+ +R L ++T + GS+YD+L Q S L++ + ++ G+ +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 226 ----QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVM-----TAETGTYRWMAP 276
+ I HRDLK+ N+L+ +NG +AD G+A + +QS GT R+MAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 277 EV 278
EV
Sbjct: 187 EV 188
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 96
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 154
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 213
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 214 TKRYMAPEV 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 28 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 83
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 84 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 141
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 200
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 201 TKRYMAPEV 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 58
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 59 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 116
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 175
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 176 TKRYMAPEV 184
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 63
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 64 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 121
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 180
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 181 TKRYMAPEV 189
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 5 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 60
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 61 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 118
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 177
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 178 TKRYMAPEV 186
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 103/189 (54%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
A+ + ++ + G +G++++G + +EVA+K+ + E F + E+Y +RH+
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFS----SREERSWFREAEIYQTVMLRHE 57
Query: 168 NVVQFIGACTRP----PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L +V+++ GS++D+L++ + ++K+A+ + G+ +
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAH 115
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE------TG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S T + G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 174
Query: 270 TYRWMAPEV 278
T R+MAPEV
Sbjct: 175 TKRYMAPEV 183
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 121 GSYGDLYKGTYCSQEV--AIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR 178
G +G +YK V A KV+ + + E L+++ E+ I+ H N+V+ + A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI--DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 179 PPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTAN 238
NL I+ EF A G++ + + + + + V +NYLH N IIHRDLK N
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN 138
Query: 239 LLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
+L +G +K+ADFGV+ ++ + ++ GT WMAPEV
Sbjct: 139 ILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEV 180
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 277 E 277
E
Sbjct: 191 E 191
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 21 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 76
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 277 E 277
E
Sbjct: 196 E 196
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 11 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 66
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + +++
Sbjct: 67 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 277 E 277
E
Sbjct: 186 E 186
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ + ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 84 SKLLIESSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ------- 134
S ++ + +PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 20 STIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPL 79
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
+VA+K L C + L +F E I+ K H+N+V+ IG + I+ E MA G +
Sbjct: 80 QVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 138
Query: 195 YDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG--- 245
FL + Q + LL VA D++ G YL +N+ IHRD+ N L+ G
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 198
Query: 246 VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
V K+ DFG+AR ++G +WM PE F
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 84 SKLLIESSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ------- 134
S ++ + +PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 43 STIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPL 102
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
+VA+K L C + L +F E I+ K H+N+V+ IG + I+ E MA G +
Sbjct: 103 QVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161
Query: 195 YDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG--- 245
FL + Q + LL VA D++ G YL +N+ IHRD+ N L+ G
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 221
Query: 246 VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
V K+ DFG+AR ++G +WM PE F
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 263
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 15 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 70
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 71 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 277 E 277
E
Sbjct: 190 E 190
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ ++SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 21 ETEFKKIKV---LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 76
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 77 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 277 E 277
E
Sbjct: 196 E 196
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 79 GVPMHSKLLIE-SSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ- 134
G+P L + S+PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 135 ------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEF 188
+VA+K L C + L +F E I+ K+ H+N+V+ IG + I+ E
Sbjct: 71 NDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLEL 129
Query: 189 MARGSIYDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD 242
MA G + FL + Q + LL VA D++ G YL +N+ IHRD+ N L+
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 243 ENG---VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
G V K+ DFG+AR ++ +WM PE F
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 18 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 73
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 74 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 277 E 277
E
Sbjct: 193 E 193
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE---------VAIKVLKPECV 146
E+P D WE +L + + G++G + + VA+K+LK +
Sbjct: 23 ELPEDPK--WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 147 NTEMLKEFSQEVYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV- 204
+ L + E+ +M+ I +HKN++ +GACT+ L ++ + ++G++ ++L ++
Sbjct: 81 EKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPG 139
Query: 205 --------------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
L+ +++GM YL IHRDL N+L+ EN V+K+A
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199
Query: 251 DFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DFG+AR T +WMAPE F
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 14 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 69
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 70 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 277 E 277
E
Sbjct: 189 E 189
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 277 E 277
E
Sbjct: 191 E 191
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 15 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 70
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 71 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 277 E 277
E
Sbjct: 190 E 190
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 109 AKQLKIECKVASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
A++ I C + GS+G++ K QE A+KV+ + +EV +++K+ H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
N+++ + IV E G ++D + K+K F ++ V G+ Y+H+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+NI+HRDLK N+L+ +++ +K+ DFG++ Q+ M GT ++APEV
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 17 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 72
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 73 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 277 E 277
E
Sbjct: 192 E 192
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAI L+ E + + KE E Y
Sbjct: 48 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIMELR-EATSPKANKEILDEAY 103
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++T+ M G + D++ + K LL + ++K
Sbjct: 104 VMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG+A+ + A+ AE G +WMA
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 277 E 277
E
Sbjct: 223 E 223
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 79 GVPMHSKLLIE-SSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ- 134
G+P L + S+PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 135 ------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEF 188
+VA+K L C + L +F E I+ K H+N+V+ IG + I+ E
Sbjct: 71 NDPSPLQVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 129
Query: 189 MARGSIYDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD 242
MA G + FL + Q + LL VA D++ G YL +N+ IHRD+ N L+
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 243 ENG---VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
G V K+ DFG+AR ++ +WM PE F
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 109 AKQLKIECKVASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
A++ I C + GS+G++ K QE A+KV+ + +EV +++K+ H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
N+++ + IV E G ++D + K+K F ++ V G+ Y+H+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+NI+HRDLK N+L+ +++ +K+ DFG++ Q+ M GT ++APEV
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 109 AKQLKIECKVASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
A++ I C + GS+G++ K QE A+KV+ + +EV +++K+ H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
N+++ + IV E G ++D + K+K F ++ V G+ Y+H+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+NI+HRDLK N+L+ +++ +K+ DFG++ Q+ M GT ++APEV
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI + + G++G +YK V + + E L+++ E+ I+
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
H N+V+ + A NL I+ EF A G++ + + + + + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQS-GVMTAETGTYRWMAPEV 278
YLH N IIHRDLK N+L +G +K+ADFGV+ ++ + GT WMAPEV
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 27/171 (15%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIY 195
VA+K+LK E + +M +F +E +M + + N+V+ +G C +C++ E+MA G +
Sbjct: 80 VAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 196 DFLHK---------------------QKGVFQLTSL--LKVAIDVSKGMNYLHQNNIIHR 232
+FL G L+ L +A V+ GM YL + +HR
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 233 DLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETG---TYRWMAPEVAF 280
DL T N L+ EN VVK+ADFG++R + A+ RWM PE F
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF 249
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI + + G++G +YK V + + E L+++ E+ I+
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
H N+V+ + A NL I+ EF A G++ + + + + + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-----RVQAQSGVMTAETGTYRWMAPE 277
YLH N IIHRDLK N+L +G +K+ADFGV+ +Q + + GT WMAPE
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI----GTPYWMAPE 205
Query: 278 V 278
V
Sbjct: 206 V 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS+G L K T ++ IK + ++++ +E +EV ++ ++H N+VQ+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGV-FQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ +L IV ++ G ++ ++ QKGV FQ +L + + + ++H I+HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 234 LKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+K+ N+ + ++G V++ DFG+ARV + + A GT +++PE+
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 79 GVPMHSKLLIE-SSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ- 134
G+P L + S+PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 135 ------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEF 188
+VA+K L PE + + +F E I+ K H+N+V+ IG + I+ E
Sbjct: 71 NDPSPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 129
Query: 189 MARGSIYDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD 242
MA G + FL + Q + LL VA D++ G YL +N+ IHRD+ N L+
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 243 ENG---VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
G V K+ DFG+AR ++ +WM PE F
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 237
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 26/189 (13%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHK 167
AKQ+++ ++ G YG+++ G + ++VA+KV TE F + E+Y +RH+
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVF----FTTEEASWFRETEIYQTVLMRHE 91
Query: 168 NVVQFIGACTRPP----NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI A + L ++T++ GS+YD+L + S+LK+A G+ +
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCH 149
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGV------MTAETG 269
LH + I HRDLK+ N+L+ +NG +AD G+A V+ S G
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRVG 208
Query: 270 TYRWMAPEV 278
T R+M PEV
Sbjct: 209 TKRYMPPEV 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 118 VASGSYGDLYKGTYCSQ-----EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y G Y Q + AIK L + ++ F +E +MR + H NV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLS-RITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 173 IGACTRPPNLC-IVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
IG P L ++ +M G + F+ + + L+ + V++GM YL + +H
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 232 RDLKTANLLMDENGVVKVADFGVAR 256
RDL N ++DE+ VKVADFG+AR
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLAR 172
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 277 E 277
E
Sbjct: 191 E 191
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 18 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 73
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 74 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 277 E 277
E
Sbjct: 193 E 193
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACT 177
+ G+YG +Y G S +V I + + ++ + +E+ + + ++HKN+VQ++G+ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 178 RPPNLCIVTEFMARGSIYDFLHKQKGVFQLT--SLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ I E + GS+ L + G + ++ + +G+ YLH N I+HRD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 236 TANLLMDE-NGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
N+L++ +GV+K++DFG ++ A T TGT ++MAPE+
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 194
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQE-------VAIKVLKPECVNTEMLKEFSQE 157
WE K L + + G +G + K T + VA+K+LK +E L++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSE 76
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL------------------- 198
+++++ H +V++ GAC++ L ++ E+ GS+ FL
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 199 ----HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGV 254
H + + L+ A +S+GM YL + +++HRDL N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 255 AR-VQAQSGVMTAETG--TYRWMAPEVAFTFFF 284
+R V + + G +WMA E F +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + K++K+ + SG++G +YKG + + VAIK L+ E + + KE E Y
Sbjct: 16 ETEFKKIKV---LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + + +V + +G C + ++ + M G + D++ + K LL + ++K
Sbjct: 72 VMASVDNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG--TYRWMAP 276
GMNYL ++HRDL N+L+ VK+ DFG A+ + A+ AE G +WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 277 E 277
E
Sbjct: 191 E 191
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACT 177
+ G+YG +Y G S +V I + + ++ + +E+ + + ++HKN+VQ++G+ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 178 RPPNLCIVTEFMARGSIYDFLHKQKGVFQLT--SLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ I E + GS+ L + G + ++ + +G+ YLH N I+HRD+K
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 236 TANLLMDE-NGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
N+L++ +GV+K++DFG ++ A T TGT ++MAPE+
Sbjct: 136 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 180
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D WEI + + G++G +YK V + + E L+++ E+ I+
Sbjct: 37 DFWEIIGE-------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
H N+V+ + A NL I+ EF A G++ + + + + + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-----RVQAQSGVMTAETGTYRWMAPE 277
YLH N IIHRDLK N+L +G +K+ADFGV+ +Q + + GT WMAPE
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI----GTPYWMAPE 205
Query: 278 V 278
V
Sbjct: 206 V 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLY-------KGTYCSQEVAIKVLKPECVNTEMLKE 153
G V I + + ++ ++ G++G ++ T VA+K LK + K+
Sbjct: 6 GIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--KD 63
Query: 154 FSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLH-------------- 199
F +E ++ ++H+++V+F G C L +V E+M G + FL
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 200 -KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQ 258
+ KG L+ +L +A ++ GM YL + +HRDL T N L+ N +VK+ DFG++R
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV 183
Query: 259 AQSGVMTAETGTY---RWMAPE 277
+ T RWM PE
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPE 205
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 91
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV---------FQL 207
+ IM + +H+N+V +GACT + ++TE+ G + +FL ++ +L
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 208 TSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTA 266
LL + V++GM +L N IHRD+ N+L+ V K+ DFG+AR + S +
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 267 ETGTY--RWMAPEVAF 280
+WMAPE F
Sbjct: 212 GNARLPVKWMAPESIF 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ SG+YG+ L + E AIK+++ V+T + +EV +++ + H N+++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 175 ACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
N +V E G ++D +H+ K F + V G+ YLH++NI+HRD
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 234 LKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
LK NLL+ +++ ++K+ DFG++ V M GT ++APEV
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR--PPNLCIVTEFMARGS 193
VA+K LK +C + + QE+ I+R + H++++++ G C +L +V E++ GS
Sbjct: 46 VAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
+ D+L + L LL A + +GM YLH + IHR+L N+L+D + +VK+ DFG
Sbjct: 105 LRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFG 162
Query: 254 VARV--QAQSGVMTAETGTYR--WMAPEV--AFTFFF 284
+A+ + E G W APE + F++
Sbjct: 163 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQE-------VAIKVLKPECVNTEMLKEFSQE 157
WE K L + + G +G + K T + VA+K+LK +E L++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSE 76
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL------------------- 198
+++++ H +V++ GAC++ L ++ E+ GS+ FL
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 199 ----HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGV 254
H + + L+ A +S+GM YL + ++HRDL N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 255 AR-VQAQSGVMTAETG--TYRWMAPEVAFTFFF 284
+R V + + G +WMA E F +
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQ------EVAIKVLKPECVNTEMLKEFSQEVY 159
E + +++K+ + SG++G +YKG + VAIKVL+ E + + KE E Y
Sbjct: 16 ETELRKVKV---LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-ENTSPKANKEILDEAY 71
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
+M + V + +G C + +VT+ M G + D + + +G LL + ++K
Sbjct: 72 VMAGVGSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAK 130
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
GM+YL ++HRDL N+L+ VK+ DFG+AR+
Sbjct: 131 GMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 34/213 (15%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTYCSQE-------VAIKVLKPECVNTEMLKEFSQE 157
WE K L + + G +G + K T + VA+K+LK +E L++ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-LRDLLSE 76
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL------------------- 198
+++++ H +V++ GAC++ L ++ E+ GS+ FL
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 199 ----HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGV 254
H + + L+ A +S+GM YL + ++HRDL N+L+ E +K++DFG+
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 255 AR-VQAQSGVMTAETG--TYRWMAPEVAFTFFF 284
+R V + + G +WMA E F +
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 81
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K+ H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIF 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G++Y+G Y + + VA+K K +C + ++F E IM+ + H ++V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
IG P I+ E G + +L + K ++ +L+ ++ + K M YL N +HR
Sbjct: 91 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 149
Query: 233 DLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
D+ N+L+ VK+ DFG++R A +WM+PE
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 84 SKLLIESSPN-CIEIPTDG-TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ------- 134
S ++ + +PN C T +D+ E+ K + + + G++G++Y+G
Sbjct: 19 STIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPL 78
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
+VA+K L C + L +F E I+ K H+N+V+ IG + I+ E MA G +
Sbjct: 79 QVAVKTLPEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 137
Query: 195 YDFLHK------QKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG--- 245
FL + Q + LL VA D++ G YL +N+ IHRD+ N L+ G
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 197
Query: 246 VVKVADFGVARVQAQSGVMT---AETGTYRWMAPEVAFTFFF 284
V K+ DFG+AR ++ +WM PE F
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 239
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV---------FQL 207
+ IM + +H+N+V +GACT + ++TE+ G + +FL ++ +L
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 208 TSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTA 266
LL + V++GM +L N IHRD+ N+L+ V K+ DFG+AR + S +
Sbjct: 160 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 267 ETGTY--RWMAPEVAF 280
+WMAPE F
Sbjct: 220 GNARLPVKWMAPESIF 235
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G++Y+G Y + + VA+K K +C + ++F E IM+ + H ++V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
IG P I+ E G + +L + K ++ +L+ ++ + K M YL N +HR
Sbjct: 75 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 133
Query: 233 DLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
D+ N+L+ VK+ DFG++R A +WM+PE
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR--PPNLCIVTEFMARGS 193
VA+K LK +C + + QE+ I+R + H++++++ G C +L +V E++ GS
Sbjct: 46 VAVKALKADC-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
+ D+L + L LL A + +GM YLH + IHR+L N+L+D + +VK+ DFG
Sbjct: 105 LRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFG 162
Query: 254 VARV--QAQSGVMTAETGTYR--WMAPEV--AFTFFF 284
+A+ + E G W APE + F++
Sbjct: 163 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY 199
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G++Y+G Y + + VA+K K +C + ++F E IM+ + H ++V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
IG P I+ E G + +L + K ++ +L+ ++ + K M YL N +HR
Sbjct: 79 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 137
Query: 233 DLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTY--RWMAPE 277
D+ N+L+ VK+ DFG++R A +WM+PE
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 11/157 (7%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC--TRPPNLCIVTEFMARGS 193
VA+K LK + + + QE+ I+R + H++++++ G C +L +V E++ GS
Sbjct: 63 VAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
+ D+L + L LL A + +GM YLH + IHRDL N+L+D + +VK+ DFG
Sbjct: 122 LRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG 179
Query: 254 VARV--QAQSGVMTAETGTYR--WMAPEV--AFTFFF 284
+A+ + E G W APE + F++
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYY 216
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 80
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIF 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 24/198 (12%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKG---TYCSQE----VAIKVLKPECVNTEMLKEF 154
T V I + ++ ++ G++G ++ C ++ VA+K LK N K+F
Sbjct: 5 TFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR--KDF 62
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL--HKQKGVF------- 205
+E ++ ++H+++V+F G C L +V E+M G + FL H V
Sbjct: 63 HREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 206 -QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG 262
+LT +L +A ++ GM YL + +HRDL T N L+ EN +VK+ DFG++R +
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 263 VMTAETGTY---RWMAPE 277
T RWM PE
Sbjct: 183 YYRVGGHTMLPIRWMPPE 200
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 22 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 80
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIF 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNT 148
++P D WE +L + +G++G + + T + VA+K+LKP T
Sbjct: 11 QLPYDHK--WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--- 205
E S+ + H N+V +GACT ++TE+ G + +FL +++ F
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 206 --------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
L LL + V+KGM +L N IHRDL N+L+ + K+ D
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 252 FGVAR-VQAQSGVMTAETGTY--RWMAPEVAFT 281
FG+AR ++ S + +WMAPE F
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 221
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 14 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 72
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 133 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIF 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNT-------EMLKEFSQEV 158
E + ++LK+ + SG +G ++KG + + +IK+ P C+ + + + +
Sbjct: 30 ETELRKLKV---LGSGVFGTVHKGVWIPEGESIKI--PVCIKVIEDKSGRQSFQAVTDHM 84
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
+ + H ++V+ +G C +L +VT+++ GS+ D + + +G LL + ++
Sbjct: 85 LAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 143
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG--VMTAETGT-YRWMA 275
KGM YL ++ ++HR+L N+L+ V+VADFGVA + ++ +E T +WMA
Sbjct: 144 KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 276 PE 277
E
Sbjct: 204 LE 205
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMT 265
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 266 AETG--TYRWMAPE 277
G RWM+PE
Sbjct: 191 GGKGLLPVRWMSPE 204
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 81
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIF 223
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 29 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 87
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 148 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIF 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNT-------EMLKEFSQEV 158
E + ++LK+ + SG +G ++KG + + +IK+ P C+ + + + +
Sbjct: 12 ETELRKLKV---LGSGVFGTVHKGVWIPEGESIKI--PVCIKVIEDKSGRQSFQAVTDHM 66
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
+ + H ++V+ +G C +L +VT+++ GS+ D + + +G LL + ++
Sbjct: 67 LAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 125
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSG--VMTAETGT-YRWMA 275
KGM YL ++ ++HR+L N+L+ V+VADFGVA + ++ +E T +WMA
Sbjct: 126 KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 276 PE 277
E
Sbjct: 186 LE 187
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 20/194 (10%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 61
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMT 265
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 266 AETG--TYRWMAPE 277
G RWM+PE
Sbjct: 182 GGKGLLPVRWMSPE 195
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNT 148
++P D WE +L + +G++G + + T + VA+K+LKP T
Sbjct: 27 QLPYDHK--WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--- 205
E S+ + H N+V +GACT ++TE+ G + +FL +++ F
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 206 --------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
L LL + V+KGM +L N IHRDL N+L+ + K+ D
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 252 FGVAR-VQAQSGVMTAETGTY--RWMAPEVAFT 281
FG+AR ++ S + +WMAPE F
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNT 148
++P D WE +L + +G++G + + T + VA+K+LKP T
Sbjct: 29 QLPYDHK--WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--- 205
E S+ + H N+V +GACT ++TE+ G + +FL +++ F
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 206 --------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
L LL + V+KGM +L N IHRDL N+L+ + K+ D
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 252 FGVAR-VQAQSGVMTAETGTY--RWMAPEVAFT 281
FG+AR ++ S + +WMAPE F
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 49 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 107
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+AR ++
Sbjct: 168 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIF 249
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNT 148
++P D WE +L + +G++G + + T + VA+K+LKP T
Sbjct: 34 QLPYDHK--WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--- 205
E S+ + H N+V +GACT ++TE+ G + +FL +++ F
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 206 --------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
L LL + V+KGM +L N IHRDL N+L+ + K+ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 252 FGVAR-VQAQSGVMTAETGTY--RWMAPEVAFT 281
FG+AR ++ S + +WMAPE F
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 96 EIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNT 148
++P D WE +L + +G++G + + T + VA+K+LKP T
Sbjct: 34 QLPYDHK--WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 149 EMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--- 205
E S+ + H N+V +GACT ++TE+ G + +FL +++ F
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 206 --------------QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
L LL + V+KGM +L N IHRDL N+L+ + K+ D
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 252 FGVAR-VQAQSGVMTAETGTY--RWMAPEVAFT 281
FG+AR ++ S + +WMAPE F
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVKWMAPESIFN 244
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF---------Q 206
E +M++ +VV+ +G ++ ++ E M RG + +L +
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 197 GGKGLLPV-----RWMSPE 210
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
ID KQL K+ G+L+KG + ++ +KVLK +T ++F++E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 167 KNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKG-VFQLTSLLKVAIDVSKGMNY 223
NV+ +GAC P P+ ++T + GS+Y+ LH+ V + +K A+D ++G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 224 LH--QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
LH + I L + ++ +DE+ +++ V G A W+APE
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA----WVAPEA 179
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 76
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 197 GGKGLLPV-----RWMSPE 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 66
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF---------Q 206
E +M++ +VV+ +G ++ ++ E M RG + +L +
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 187 GGKGLLPV-----RWMSPE 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 184 GGKGLLPV-----RWMSPE 197
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 190 GGKGLLPV-----RWMSPE 203
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 70
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 191 GGKGLLPV-----RWMSPE 204
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 67
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 128 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 188 GGKGLLPV-----RWMSPE 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--------- 207
+ IM + +H+N+V +GACT + ++TE+ G + +FL ++ V +
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 208 ----TSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSG 262
LL + V++GM +L N IHRD+ N+L+ V K+ DFG+AR + S
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 263 VMTAETGTY--RWMAPEVAF 280
+ +WMAPE F
Sbjct: 220 YIVKGNARLPVKWMAPESIF 239
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 24/188 (12%)
Query: 109 AKQLK-IECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK 167
A+Q+ +EC V G YG++++G + + VA+K+ E E+Y +RH
Sbjct: 7 ARQVALVEC-VGKGRYGEVWRGLWHGESVAVKIFSSR---DEQSWFRETEIYNTVLLRHD 62
Query: 168 NVVQFIGACTRPPN----LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNY 223
N++ FI + N L ++T + GS+YDFL +Q L L++A+ + G+ +
Sbjct: 63 NILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA--LRLAVSAACGLAH 120
Query: 224 LH--------QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVM-----TAETGT 270
LH + I HRD K+ N+L+ N +AD G+A + +Q GT
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 271 YRWMAPEV 278
R+MAPEV
Sbjct: 181 KRYMAPEV 188
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 69
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 190 GGKGLLPV-----RWMSPE 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 126 LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIV 185
L + +EVAIK++ +N L++ +EV IM+ + H N+V+ L ++
Sbjct: 33 LARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92
Query: 186 TEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG 245
E+ + G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D +
Sbjct: 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKRIVHRDLKAENLLLDADM 151
Query: 246 VVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K+ADFG + G + A G + APE+
Sbjct: 152 NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPEL 184
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 114 IECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVN-TEMLKEFSQEVYIMRKIRHKNVV 170
I + GS+G + T+ Q+VA+K + + + ++M +E+ ++ +RH +++
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
+ T P ++ +V E+ A G ++D++ ++K + + + + + Y H++ I+
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHKIV 130
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
HRDLK NLL+D+N VK+ADFG++ + + G+ + APEV
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 25/179 (13%)
Query: 119 ASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR 178
A G +G ++K + VA+K+ + + + +E++ ++H+N++QFI A R
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 179 PPNL----CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN------- 227
NL ++T F +GS+ D+L + + L VA +S+G++YLH++
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 228 ----NIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET----GTYRWMAPEV 278
+I HRD K+ N+L+ + +ADFG+A V+ + G +T GT R+MAPEV
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEPGKPPGDTHGQVGTRRYMAPEV 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--------- 207
+ IM + +H+N+V +GACT + ++TE+ G + +FL ++ V +
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 208 ----TSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSG 262
LL + V++GM +L N IHRD+ N+L+ V K+ DFG+AR + S
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 263 VMTAETGTY--RWMAPEVAF 280
+ +WMAPE F
Sbjct: 220 YIVKGNARLPVKWMAPESIF 239
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 98
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N ++ E+ VK+ DFG+ R +
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 219 GGKGLLPV-----RWMSPE 232
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 118 VASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFIG 174
V GSYG + K + VAIK E + +M+K+ + +E+ +++++RH+N+V +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
C + +V EF+ +I D L + K + G+ + H +NIIHRD+
Sbjct: 92 VCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K N+L+ ++GVVK+ DFG AR A G V E T + APE+
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 118 VASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
+ G +G +YKG VA+K LK E L +F EV ++ H+N+++ G C
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL-QFQTEVEMISMAVHRNLLRLRGFC 104
Query: 177 TRPPNLCIVTEFMARGSIYDFLHKQ---KGVFQLTSLLKVAIDVSKGMNYLHQN---NII 230
P +V +MA GS+ L ++ + ++A+ ++G+ YLH + II
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 164
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQ--AQSGVMTAETGTYRWMAPEVAFT 281
HRD+K AN+L+DE V DFG+A++ V A GT +APE T
Sbjct: 165 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLST 217
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 102 TDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEF 154
+D+ E+ K + + + G++G++Y+G +VA+K L C + L +F
Sbjct: 23 SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-DF 81
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHK------QKGVFQLT 208
E I+ K H+N+V+ IG + I+ E MA G + FL + Q +
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG---VVKVADFGVARVQAQSGVMT 265
LL VA D++ G YL +N+ IHRD+ N L+ G V K+ DFG+A+ ++
Sbjct: 142 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 266 ---AETGTYRWMAPEVAFTFFF 284
+WM PE F
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIF 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 126 LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIV 185
L + +EVAIK++ +N L++ +EV IM+ + H N+V+ L ++
Sbjct: 30 LARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 89
Query: 186 TEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG 245
E+ + G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D +
Sbjct: 90 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-AVQYCHQKRIVHRDLKAENLLLDADM 148
Query: 246 VVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K+ADFG + G + G+ + APE+
Sbjct: 149 NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPEL 181
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VAIK + E + EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFL 63
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M++ +VV+ +G ++ ++ E M RG + +L + +
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQ 258
L+ ++++A +++ GM YL+ N +HRDL N + E+ VK+ DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 259 AQSGVMTAETGTYRWMAPE 277
G++ RWM+PE
Sbjct: 184 GGKGLLPV-----RWMSPE 197
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 27/202 (13%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 99
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF----------- 205
+ IM + +H+N+V +GACT + ++TE+ G + +FL +++
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 206 --QLTS--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQ 260
QL+S LL + V++GM +L N IHRD+ N+L+ V K+ DFG+AR +
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 261 SGVMTAETGTY--RWMAPEVAF 280
S + +WMAPE F
Sbjct: 220 SNYIVKGNARLPVKWMAPESIF 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 174
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 93 NCIEIPTDGTD--VWEIDAKQLKIECKVASGSYGDLY----KGTYCSQE---VAIKVLKP 143
+ IE P +D V I + + ++ ++ G++G ++ Q+ VA+K LK
Sbjct: 22 HIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE 81
Query: 144 ECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ-- 201
+ ++F +E ++ ++H+++V+F G CT L +V E+M G + FL
Sbjct: 82 ASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP 139
Query: 202 ------------KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
G L LL VA V+ GM YL + +HRDL T N L+ + VVK+
Sbjct: 140 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 199
Query: 250 ADFGVARVQAQSGVMTAETGTY---RWMAPE 277
DFG++R + T RWM PE
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 100 DGTDVWEIDAKQLK--IECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLK----E 153
+ + W+ A+ +K E K G+ G + ++ K+ +C+ + LK
Sbjct: 8 ESSSSWKKQAEDIKKIFEFKETLGT-GAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS 66
Query: 154 FSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF---QLTSL 210
E+ ++RKI+H+N+V P +L +V + ++ G ++D + +KG + ++L
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTL 125
Query: 211 LKVAIDVSKGMNYLHQNNIIHRDLKTANLL---MDENGVVKVADFGVARVQAQSGVMTAE 267
++ +D + YLH+ I+HRDLK NLL DE + ++DFG+++++ + VM+
Sbjct: 126 IRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA 182
Query: 268 TGTYRWMAPEV 278
GT ++APEV
Sbjct: 183 CGTPGYVAPEV 193
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 23/158 (14%)
Query: 116 CKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
K+ G++G+++K + Q+VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 174 GAC---TRPPNLCIVTEFMARGSIY---DFL-HKQKGV-------FQLTSLLKVAIDVSK 219
C P N C +GSIY DF H G+ F L+ + +V +
Sbjct: 84 EICRTKASPYNRC-------KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
G+ Y+H+N I+HRD+K AN+L+ +GV+K+ADFG+AR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 148
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 154
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 175
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 153
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 23/158 (14%)
Query: 116 CKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
K+ G++G+++K + Q+VA+K + E +E+ I++ ++H+NVV I
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 174 GAC---TRPPNLCIVTEFMARGSIY---DFL-HKQKGV-------FQLTSLLKVAIDVSK 219
C P N C +GSIY DF H G+ F L+ + +V +
Sbjct: 83 EICRTKASPYNRC-------KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
G+ Y+H+N I+HRD+K AN+L+ +GV+K+ADFG+AR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 23/158 (14%)
Query: 116 CKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
K+ G++G+++K + Q+VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 174 GAC---TRPPNLCIVTEFMARGSIY---DFL-HKQKGV-------FQLTSLLKVAIDVSK 219
C P N C +GSIY DF H G+ F L+ + +V +
Sbjct: 84 EICRTKASPYNRC-------KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
G+ Y+H+N I+HRD+K AN+L+ +GV+K+ADFG+AR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 17/155 (10%)
Query: 116 CKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
K+ G++G+++K + Q+VA+K + E +E+ I++ ++H+NVV I
Sbjct: 24 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 174 GAC---TRPPNLCIVTEFMARGSIYDFL-HKQKGV-------FQLTSLLKVAIDVSKGMN 222
C P N C + ++ ++DF H G+ F L+ + +V + G+
Sbjct: 84 EICRTKASPYNRCKASIYL----VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
Y+H+N I+HRD+K AN+L+ +GV+K+ADFG+AR
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM YL +H
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 232 RDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT-----YRWMAPE 277
RDL N ++DE VKVADFG+AR + T +WMA E
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIY 195
VA+K LK + ++F +E ++ ++H+++V+F G CT L +V E+M G +
Sbjct: 51 VAVKALKEASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 196 DFLHKQ--------------KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
FL G L LL VA V+ GM YL + +HRDL T N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 242 DENGVVKVADFGVARVQAQSGVMTAETGTY---RWMAPE 277
+ VVK+ DFG++R + T RWM PE
Sbjct: 169 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIY 195
VA+K LK + ++F +E ++ ++H+++V+F G CT L +V E+M G +
Sbjct: 45 VAVKALKEASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 196 DFLHKQ--------------KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
FL G L LL VA V+ GM YL + +HRDL T N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 242 DENGVVKVADFGVARVQAQSGVMTAETGTY---RWMAPE 277
+ VVK+ DFG++R + T RWM PE
Sbjct: 163 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 201
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 118 VASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
+ G +G +YKG VA+K LK E L +F EV ++ H+N+++ G C
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFC 96
Query: 177 TRPPNLCIVTEFMARGSIYDFLHKQ---KGVFQLTSLLKVAIDVSKGMNYLHQN---NII 230
P +V +MA GS+ L ++ + ++A+ ++G+ YLH + II
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQ--AQSGVMTAETGTYRWMAPEVAFT 281
HRD+K AN+L+DE V DFG+A++ V A G +APE T
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLST 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE L+ + +G++G + + T +VA+K+LK + + + E
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSE 84
Query: 158 VYIMRKI-RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV------------ 204
+ IM + +H+N+V +GACT + ++TE+ G + +FL ++
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 205 ----------FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGV 254
+L LL + V++GM +L N IHRD+ N+L+ V K+ DFG+
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 255 AR-VQAQSGVMTAETGTY--RWMAPEVAF 280
AR + S + +WMAPE F
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIF 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 118 VASGSYGDLYKGT--YCSQEVAIKVLK-------PECVNTEMLKEFSQEVYIMRKIRHKN 168
+ G + +YK +Q VAIK +K + +N L+E + +++++ H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE----IKLLQELSHPN 73
Query: 169 VVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS-KGMNYLHQN 227
++ + A N+ +V +FM + + + K + S +K + ++ +G+ YLHQ+
Sbjct: 74 IIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 228 NIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM-APEVAF 280
I+HRDLK NLL+DENGV+K+ADFG+A+ RW APE+ F
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ G+ G +Y QEVAI+ + + + KE E+ +MR+ ++ N+V ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V E++A GS+ D + + + V + + + +LH N +IHRD
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ N+L+ +G VK+ DFG A++ + + GT WMAPEV
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 3 PSSVYVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 58
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 59 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 256 R-VQAQSGVMTAETG--TYRWMAPE 277
R + G RWMAPE
Sbjct: 178 RDIXETDXXRKGGKGLLPVRWMAPE 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA+K++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + A G + APE+
Sbjct: 157 FGFSNEFTFGNKLDAFCGAPPYAAPEL 183
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ G+ G +Y QEVAI+ + + + KE E+ +MR+ ++ N+V ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V E++A GS+ D + + + V + + + +LH N +IHRD
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ N+L+ +G VK+ DFG A++ + + GT WMAPEV
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ G+ G +Y QEVAI+ + + + KE E+ +MR+ ++ N+V ++
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V E++A GS+ D + + + V + + + +LH N +IHRD
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRD 142
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ N+L+ +G VK+ DFG A++ + + GT WMAPEV
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 188
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQE 157
WE + L+ + SG++G + T S +VA+K+LK + ++E S+
Sbjct: 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK--------------- 202
+ + H+N+V +GACT + ++ E+ G + ++L ++
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 203 -------GVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
V LL A V+KGM +L + +HRDL N+L+ VVK+ DFG+A
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 256 R-VQAQSGVMTAETGTY--RWMAPEVAF 280
R + + S + +WMAPE F
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESLF 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
+ + LK ++ G++G + Y VA+K L+ + ++F +E+ I
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQI 61
Query: 161 MRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++ + +V++ G P P L +V E++ G + DFL + + + LL + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA--QSGVMTAETGTYR--WM 274
KGM YL +HRDL N+L++ VK+ADFG+A++ + + E G W
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 275 APE 277
APE
Sbjct: 182 APE 184
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ G+ G +Y QEVAI+ + + + KE E+ +MR+ ++ N+V ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V E++A GS+ D + + + V + + + +LH N +IHRD
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ N+L+ +G VK+ DFG A++ + + GT WMAPEV
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + + +TG +WMA E
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFI 173
K+ SG+YG+ L K E AIK++K V T EV +++++ H N+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 174 GACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
N +V E G ++D + +QK F + V G YLH++NI+HR
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 233 DLKTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
DLK NLL++ + ++K+ DFG++ G M GT ++APEV
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 177
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 3 PSSVFVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 58
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 59 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 256 R-VQAQSGVMTAETG--TYRWMAPE 277
R + G RWMAPE
Sbjct: 178 RDIXETDXXRKGGKGLLPVRWMAPE 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Query: 121 GSYGDLYKGTY--CSQEVAIKVLKPECVNT-EMLKEFSQEVYIMRKIRHKNVVQFIGACT 177
G++G + G + +VA+K+L + + + +++ + +E+ ++ RH ++++ +
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 178 RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTA 237
P ++ +V E+++ G ++D++ K G ++ + G++Y H++ ++HRDLK
Sbjct: 87 TPSDIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPE 145
Query: 238 NLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N+L+D + K+ADFG++ + + + G+ + APEV
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+L+ VK
Sbjct: 98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVK 156
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
KV+ Y GT + VA+K LK C ++ + +E+ I+R + H+++V++ G C
Sbjct: 23 KVSLYCYDPTNDGT--GEMVAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCC 79
Query: 177 TR--PPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
++ +V E++ GS+ D+L + L LL A + +GM YLH + IHR L
Sbjct: 80 EDQGEKSVQLVMEYVPLGSLRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQHYIHRAL 137
Query: 235 KTANLLMDENGVVKVADFGVARV--QAQSGVMTAETGTYR--WMAPE 277
N+L+D + +VK+ DFG+A+ + E G W APE
Sbjct: 138 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTR--PPNLCIVTEFMARGS 193
VA+K LK C ++ + +E+ I+R + H+++V++ G C ++ +V E++ GS
Sbjct: 41 VAVKALKEGC-GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
+ D+L + L LL A + +GM YLH + IHR L N+L+D + +VK+ DFG
Sbjct: 100 LRDYLPRH--CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFG 157
Query: 254 VARV--QAQSGVMTAETGTYR--WMAPE 277
+A+ + E G W APE
Sbjct: 158 LAKAVPEGHEYYRVREDGDSPVFWYAPE 185
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 117 KVASGSYGDLYKGTYCSQ----EVAIKVLK--PECVNTEMLKEFSQEVYIMRKIRHKNVV 170
++ G++G + +G Y + +VAIKVLK E +TE E +E IM ++ + +V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIV 73
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
+ IG C + L +V E G ++ FL ++ ++++ ++ VS GM YL + N +
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 231 HRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG---TYRWMAPE 277
HRDL N+L+ K++DFG+++ + A TA + +W APE
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFI 173
K+ SG+YG+ L K E AIK++K V T EV +++++ H N+++
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 174 GACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
N +V E G ++D + +QK F + V G YLH++NI+HR
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 233 DLKTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
DLK NLL++ + ++K+ DFG++ G M GT ++APEV
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV 194
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 3 PSSVFVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 58
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 59 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 256 R-VQAQSGVMTAETG--TYRWMAPE 277
R + + G RWMAPE
Sbjct: 178 RDIYETAYYRKGGKGLLPVRWMAPE 202
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 113 KIECKVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+++ + G++ L + +EVA+K++ +N L++ +EV IM+ + H N+V
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
+ L +V E+ + G ++D+L + + + K VS + Y HQ I+
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKYIV 136
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
HRDLK NLL+D + +K+ADFG + + G+ + APE+
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPEL 184
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + +TG +WMA E
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 154
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + +TG +WMA E
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA+K++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + G+ + APE+
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 161
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + +TG +WMA E
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA+K++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + G+ + APE+
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215
Query: 232 RDLKTANLLMDENGVVKVADFGVAR 256
RDL N ++DE VKVADFG+AR
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + +TG +WMA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 3 PSSVFVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 58
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 59 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 256 R--------VQAQSGVMTAETGTYRWMAPE 277
R + G++ RWMAPE
Sbjct: 178 RDIYETDYYRKGGKGLLPV-----RWMAPE 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA+K++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 149
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + G+ + APE+
Sbjct: 150 FGFSNEFTFGNKLDTFCGSPPYAAPEL 176
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 118 VASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
+ G +G +Y GT + A+K L + + +F E IM+ H NV+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 173 IGACTRPP-NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIH 231
+G C R + +V +M G + +F+ + + L+ + V+KGM +L +H
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 232 RDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGT---YRWMAPE 277
RDL N ++DE VKVADFG+AR + + +TG +WMA E
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 103 DVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFS 155
D WE+ +++ + ++ GS+G +Y+G VA+K + E + EF
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFL 65
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ--------- 206
E +M+ +VV+ +G ++ +V E MA G + +L + +
Sbjct: 66 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMT 265
L ++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+ R +
Sbjct: 126 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRK 185
Query: 266 AETG--TYRWMAPE 277
G RWMAPE
Sbjct: 186 GGKGLLPVRWMAPE 199
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 118 VASGSYGDLYK-----GTYCSQEVAIKVLKPECV--NTEMLKEFSQEVYIMRKIRHKNVV 170
+ G YG +++ G + A+KVLK + N + E I+ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
I A L ++ E+++ G ++ L ++ G+F + ++S + +LHQ II
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
+RDLK N++++ G VK+ DFG+ + G +T GT +MAPE+
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+++ VK
Sbjct: 98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 118 VASGSYGDLYK-----GTYCSQEVAIKVLKPECV--NTEMLKEFSQEVYIMRKIRHKNVV 170
+ G YG +++ G + A+KVLK + N + E I+ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
I A L ++ E+++ G ++ L ++ G+F + ++S + +LHQ II
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
+RDLK N++++ G VK+ DFG+ + G +T GT +MAPE+
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+++ VK
Sbjct: 98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVN-TEMLKEFS--QEVYIMRKIRHKNVVQFIG 174
+ SG++ +++ Q + K+ +C+ + ++ S E+ +++KI+H+N+V
Sbjct: 17 LGSGAFSEVF---LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ +V + ++ G ++D + ++GV+ V V + YLH+N I+HRDL
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 235 KTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL +EN + + DFG+++++ Q+G+M+ GT ++APEV
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVAPEV 178
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+++ VK
Sbjct: 98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEY 97
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+++ VK
Sbjct: 98 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ G+ G +Y QEVAI+ + + + KE E+ +MR+ ++ N+V ++
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V E++A GS+ D + + + V + + + +LH N +IHR+
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRN 142
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ N+L+ +G VK+ DFG A++ + + GT WMAPEV
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA+K++ +N+ L++ +EV I + + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADXNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + A G + APE+
Sbjct: 157 FGFSNEFTFGNKLDAFCGAPPYAAPEL 183
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA++++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + G+ + APE+
Sbjct: 157 FGFSNEFTFGNKLDTFCGSPPYAAPEL 183
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY-----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
ID L + + G +G + +G S +VA+K +K + + ++EF E M
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 162 RKIRHKNVVQFIGACTRP-----PNLCIVTEFMARGSIYDFLHKQK-----GVFQLTSLL 211
+ H NV++ +G C P ++ FM G ++ +L + L +LL
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR 256
K +D++ GM YL N +HRDL N ++ ++ V VADFG+++
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 121 GSYGDLYKGTY--CSQEVAIKVLKPECVNT-EMLKEFSQEVYIMRKIRHKNVVQFIGACT 177
G++G + G + +VA+K+L + + + +++ + +E+ ++ RH ++++ +
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 178 RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTA 237
P + +V E+++ G ++D++ K V ++ + ++ + ++Y H++ ++HRDLK
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHMVVHRDLKPE 140
Query: 238 NLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N+L+D + K+ADFG++ + + + G+ + APEV
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 75/135 (55%), Gaps = 15/135 (11%)
Query: 151 LKEFSQEVYIMRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDF-----LHKQKG 203
+++ QE+ I++K+ H NVV+ + P +L +V E + +G + + L + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 204 VFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSG 262
F L+K G+ YLH IIHRD+K +NLL+ E+G +K+ADFGV+ +
Sbjct: 140 RFYFQDLIK-------GIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 263 VMTAETGTYRWMAPE 277
+++ GT +MAPE
Sbjct: 193 LLSNTVGTPAFMAPE 207
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQE 157
D +VWEI + + G++G +YK A KV+ E + E L+++ E
Sbjct: 8 DPNEVWEIVGE-------LGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVE 58
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
+ I+ H +V+ +GA L I+ EF G++ + + + V +
Sbjct: 59 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 118
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQS-GVMTAETGTYRWMAP 276
+ +N+LH IIHRDLK N+LM G +++ADFGV+ ++ + GT WMAP
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
Query: 277 EV 278
EV
Sbjct: 179 EV 180
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 117 KVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
KV G+YG +YK VA+K ++ + + + +E+ +++++ H N+V I
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EFM + + L + K Q + + + +G+ + HQ+ I+HRDLK
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 236 TANLLMDENGVVKVADFGVAR---VQAQSGVMTAETGTYRWMAPEV 278
NLL++ +G +K+ADFG+AR + +S T E T + AP+V
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDV 190
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 117 KVASGSYGDLYKGTYCSQE-VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
KV G+YG +YK VA+K ++ + + + +E+ +++++ H N+V I
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EFM + + L + K Q + + + +G+ + HQ+ I+HRDLK
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 236 TANLLMDENGVVKVADFGVAR---VQAQSGVMTAETGTYRWMAPEV 278
NLL++ +G +K+ADFG+AR + +S T E T + AP+V
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDV 190
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
+EVA++++ +N+ L++ +EV IM+ + H N+V+ L +V E+ +
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G ++D+L + + + K VS + Y HQ I+HRDLK NLL+D + +K+AD
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 156
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG + + G+ + APE+
Sbjct: 157 FGFSNEFTFGNKLDEFCGSPPYAAPEL 183
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 134 QEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQF--IGACTRP--PNLCIVTEF 188
++VA+KVL+ + + F +E + H +V G P P IV E+
Sbjct: 55 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 114
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
+ ++ D +H + G ++V D + +N+ HQN IIHRD+K AN+++ VK
Sbjct: 115 VDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 173
Query: 249 VADFGVARVQAQSGVMTAET----GTYRWMAPEVA 279
V DFG+AR A SG +T GT ++++PE A
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 117 KVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS G + T + ++VA+K K + + + EV IMR H NVV
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVK--KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ L +V EF+ G++ D + H + Q+ + V + V + ++YLH +IHRD
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQGVIHRD 166
Query: 234 LKTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+K+ ++L+ +G +K++DFG A+V + GT WMAPEV
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV 212
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQE-----VAIKVLKPECVNTEMLKEFSQEVYIM 161
I +Q + + G +G + + ++ VA+K+LK + + + ++EF +E M
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 162 RKIRHKNVVQFIGACTRP------PNLCIVTEFMARGSIYDFLHKQK-----GVFQLTSL 210
++ H +V + +G R P ++ FM G ++ FL + L +L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 211 LKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR 256
++ +D++ GM YL N IHRDL N ++ E+ V VADFG++R
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
Query: 121 GSYGDLYKGTY--CSQEVAIKVLKPECVNT-EMLKEFSQEVYIMRKIRHKNVVQFIGACT 177
G++G + G + +VA+K+L + + + +++ + +E+ ++ RH ++++ +
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 178 RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTA 237
P + +V E+++ G ++D++ K V ++ + ++ + ++Y H++ ++HRDLK
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHMVVHRDLKPE 140
Query: 238 NLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N+L+D + K+ADFG++ + + + G+ + APEV
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 100 DGTDVWEIDAKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQE 157
D +VWEI + + G++G +YK A KV+ E + E L+++ E
Sbjct: 16 DPNEVWEIVGE-------LGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVE 66
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
+ I+ H +V+ +GA L I+ EF G++ + + + V +
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQS-GVMTAETGTYRWMAP 276
+ +N+LH IIHRDLK N+LM G +++ADFGV+ ++ + GT WMAP
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
Query: 277 EV 278
EV
Sbjct: 187 EV 188
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 3 PSSVYVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 58
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 59 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HR+L N ++ + VK+ DFG+
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 177
Query: 256 R--------VQAQSGVMTAETGTYRWMAPE 277
R + G++ RWMAPE
Sbjct: 178 RDIYETDYYRKGGKGLLPV-----RWMAPE 202
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 92 PNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPE 144
P+ + +P D WE+ +++ + ++ GS+G +Y+G VA+K +
Sbjct: 4 PSSVYVP----DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 59
Query: 145 CVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGV 204
E + EF E +M+ +VV+ +G ++ +V E MA G + +L +
Sbjct: 60 ASLRERI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 118
Query: 205 FQ---------LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ L ++++A +++ GM YL+ +HR+L N ++ + VK+ DFG+
Sbjct: 119 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT 178
Query: 256 R--------VQAQSGVMTAETGTYRWMAPE 277
R + G++ RWMAPE
Sbjct: 179 RDIYETDYYRKGGKGLLPV-----RWMAPE 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 117 KVASGSYGDLYKGTYCSQ----EVAIKVLK--PECVNTEMLKEFSQEVYIMRKIRHKNVV 170
++ G++G + +G Y + +VAIKVLK E +TE E +E IM ++ + +V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIV 399
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
+ IG C + L +V E G ++ FL ++ ++++ ++ VS GM YL + N +
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 231 HRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETG---TYRWMAPE 277
HR+L N+L+ K++DFG+++ + A TA + +W APE
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ GS+G L T Q+VA+K++ + + ++M +E+ +R +RH ++++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ +V E+ A ++D++ Q+ + + + Y H++ I+HRDL
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+DE+ VK+ADFG++ + + G+ + APEV
Sbjct: 140 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ GS+G L T Q+VA+K++ + + ++M +E+ +R +RH ++++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ +V E+ A ++D++ Q+ + + + Y H++ I+HRDL
Sbjct: 76 VIKSKDEIIMVIEY-AGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 133
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+DE+ VK+ADFG++ + + G+ + APEV
Sbjct: 134 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ GS+G L T Q+VA+K++ + + ++M +E+ +R +RH ++++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ +V E+ A ++D++ Q+ + + + Y H++ I+HRDL
Sbjct: 81 VIKSKDEIIMVIEY-AGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+DE+ VK+ADFG++ + + G+ + APEV
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 118 VASGSYGDLYKGTYC-SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
+ G +G +YKG +VA+K PE +++ ++EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 177 TRPPNLCIVTEFMARGSIYDFLHKQK---GVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ ++ ++M G++ L+ L++ I ++G++YLH IIHRD
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRD 164
Query: 234 LKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPE 277
+K+ N+L+DEN V K+ DFG+++ Q+ + GT ++ PE
Sbjct: 165 VKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ GS+G L T Q+VA+K++ + + ++M +E+ +R +RH ++++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ +V E+ A ++D++ Q+ + + + Y H++ I+HRDL
Sbjct: 72 VIKSKDEIIMVIEY-AGNELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 129
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+DE+ VK+ADFG++ + + G+ + APEV
Sbjct: 130 KPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 118 VASGSYGDLYKGTYC-SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
+ G +G +YKG +VA+K PE +++ ++EF E+ + RH ++V IG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 177 TRPPNLCIVTEFMARGSIYDFLHKQK---GVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+ ++ ++M G++ L+ L++ I ++G++YLH IIHRD
Sbjct: 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRD 164
Query: 234 LKTANLLMDENGVVKVADFGVARVQA---QSGVMTAETGTYRWMAPE 277
+K+ N+L+DEN V K+ DFG+++ Q+ + GT ++ PE
Sbjct: 165 VKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPE 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
W+ A+ LK ++ G+YG + K + Q +A+K ++ E + +MR
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR 76
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARG--SIYDFLHK-QKGVFQLTSLLKVAIDVSK 219
+VQF GA R + I E M+ Y +++ V L K+ + K
Sbjct: 77 SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK 136
Query: 220 GMNYLHQN-NIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+N+L +N IIHRD+K +N+L+D +G +K+ DFG++ S T + G +MAPE
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE 195
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 139 KVLKPECVNTEMLK----EFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
K++ +C+ E L+ E+ ++ KI+H N+V +L ++ + ++ G +
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL---MDENGVVKVAD 251
+D + +KG + ++ V + YLH I+HRDLK NLL +DE+ + ++D
Sbjct: 104 FDRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+++++ V++ GT ++APEV
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
+ + LK ++ G++G + Y VA+K L+ + + ++F +E+ I
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQI 64
Query: 161 MRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++ + +V++ G P +L +V E++ G + DFL + + + LL + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA--QSGVMTAETGTYR--WM 274
KGM YL +HRDL N+L++ VK+ADFG+A++ + + E G W
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 275 APE 277
APE
Sbjct: 185 APE 187
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ RG +Y L K F +++ ++Y H +IHRD+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 140 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 182
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
+ + LK ++ G++G + Y VA+K L+ + ++F +E+ I
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQI 65
Query: 161 MRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++ + +V++ G P +L +V E++ G + DFL + + + LL + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA--QSGVMTAETGTYR--WM 274
KGM YL +HRDL N+L++ VK+ADFG+A++ + + E G W
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 275 APE 277
APE
Sbjct: 186 APE 188
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTY------CSQEVAIKVLKPECVNTEMLKEFSQEVYI 160
+ + LK ++ G++G + Y VA+K L+ + ++F +E+ I
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQI 77
Query: 161 MRKIRHKNVVQFIGACTRP--PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVS 218
++ + +V++ G P +L +V E++ G + DFL + + + LL + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA--QSGVMTAETGTYR--WM 274
KGM YL +HRDL N+L++ VK+ADFG+A++ + + E G W
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 275 APE 277
APE
Sbjct: 198 APE 200
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 98 PTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEF 154
P W ++ I + G +G++Y + +A+KVL K + + +
Sbjct: 2 PLGSKRQWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL 59
Query: 155 SQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
+EV I +RH N+++ G + ++ E+ G++Y L K F
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYI 118
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
+++ ++Y H +IHRD+K NLL+ NG +K+ADFG + V A S T GT ++
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYL 177
Query: 275 APEV 278
PE+
Sbjct: 178 PPEM 181
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 139 KVLKPECVNTEMLK----EFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
K++ +C+ E L+ E+ ++ KI+H N+V +L ++ + ++ G +
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL---MDENGVVKVAD 251
+D + +KG + ++ V + YLH I+HRDLK NLL +DE+ + ++D
Sbjct: 104 FDRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+++++ V++ GT ++APEV
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 143
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 187
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 147
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 191
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 154
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 198
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 152
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 196
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 139 KVLKPECVNTEMLK----EFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
K++ +C+ E L+ E+ ++ KI+H N+V +L ++ + ++ G +
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL---MDENGVVKVAD 251
+D + +KG + ++ V + YLH I+HRDLK NLL +DE+ + ++D
Sbjct: 104 FDRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+++++ V++ GT ++APEV
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQFIG 174
+ GS+G+ L K QE A+KV+ V + KE +EV +++++ H N+++
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+V E G ++D + +K F ++ V G+ Y+H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 235 KTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL++ ++ +++ DFG++ S M + GT ++APEV
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 21 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 80
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 81 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 138
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 278 VAFTFFF 284
+ F
Sbjct: 199 CINYYKF 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 82
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 140
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 278 VAFTFFF 284
+ F
Sbjct: 201 CINYYKF 207
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 82
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 140
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 278 VAFTFFF 284
+ F
Sbjct: 201 CINYYKF 207
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 73 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 130
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 278 VAFTFFF 284
+ F
Sbjct: 191 CINYYKF 197
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 60
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 118
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 278 VAFTFFF 284
+ F
Sbjct: 179 CINYYKF 185
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 278 VAFTFFF 284
+ F
Sbjct: 185 CINYYKF 191
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLY--KGTYCSQEVAIK-VLKPECVNTEMLKEFSQEVYI 160
+ +I ++ KI K+ G +Y + T + +VAIK + P E LK F +EV+
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 161 MRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKG 220
++ H+N+V I +V E++ ++ +++ + G + + + + G
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDG 123
Query: 221 MNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE--TGTYRWMAPEV 278
+ + H I+HRD+K N+L+D N +K+ DFG+A+ +++ + GT ++ +PE
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 279 A 279
A
Sbjct: 184 A 184
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQFIG 174
+ GS+G+ L K QE A+KV+ V + KE +EV +++++ H N+++
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+V E G ++D + +K F ++ V G+ Y+H+N I+HRDL
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 235 KTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL++ ++ +++ DFG++ S M + GT ++APEV
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQFIG 174
+ GS+G+ L K QE A+KV+ V + KE +EV +++++ H N+++
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+V E G ++D + +K F ++ V G+ Y+H+N I+HRDL
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 235 KTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL++ ++ +++ DFG++ S M + GT ++APEV
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 120
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 278 VAFTFFF 284
+ F
Sbjct: 181 CINYYKF 187
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 124
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 278 VAFTFFF 284
+ F
Sbjct: 185 CINYYKF 191
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQFIG 174
+ GS+G+ L K QE A+KV+ V + KE +EV +++++ H N+++
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+V E G ++D + +K F ++ V G+ Y+H+N I+HRDL
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 235 KTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL++ ++ +++ DFG++ S M + GT ++APEV
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 205
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 197
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 241
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYC-------SQEVAIKVLKPECVNTEMLKEFSQEV 158
EI ++ ++ +G +YKG +Q VAIK LK + + +EF E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 63
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL-----HKQKGVFQLTSLLKV 213
+ +++H NVV +G T+ L ++ + + G +++FL H G +K
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 214 AID----------VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQS- 261
A++ ++ GM YL ++++H+DL T N+L+ + VK++D G+ R V A
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 183
Query: 262 -GVMTAETGTYRWMAPE 277
++ RWMAPE
Sbjct: 184 YKLLGNSLLPIRWMAPE 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYC-------SQEVAIKVLKPECVNTEMLKEFSQEV 158
EI ++ ++ +G +YKG +Q VAIK LK + + +EF E
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEA 80
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFL-----HKQKGVFQLTSLLKV 213
+ +++H NVV +G T+ L ++ + + G +++FL H G +K
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 214 AID----------VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQS- 261
A++ ++ GM YL ++++H+DL T N+L+ + VK++D G+ R V A
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 200
Query: 262 -GVMTAETGTYRWMAPE 277
++ RWMAPE
Sbjct: 201 YKLLGNSLLPIRWMAPE 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 366 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 425
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 483
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 278 VAFTFFF 284
+ F
Sbjct: 544 CINYYKF 550
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 107 IDAKQLKIECK-VASGSYGDLYKGTY----CSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+D K L +E K + SG++G + KG Y + VA+K+LK E + + E E +M
Sbjct: 365 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 424
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
+++ + +V+ IG C + +V E G + +L + + V + +++++ VS GM
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHV-KDKNIIELVHQVSMGM 482
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAET-GTY--RWMAPE 277
YL ++N +HRDL N+L+ K++DFG+++ ++A A+T G + +W APE
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 278 VAFTFFF 284
+ F
Sbjct: 543 CINYYKF 549
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G+ W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S A GT ++ PE
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE 179
Query: 278 V 278
+
Sbjct: 180 M 180
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL + E ++ + +E+ I +RH N+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ EF RG +Y L K G F +++ ++Y H+ +IHRD+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLLM G +K+ADFG + V A S GT ++ PE+
Sbjct: 141 KPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ RG +Y L K F +++ ++Y H +IHRD+
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 140 KPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEM 182
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL + E ++ + +E+ I +RH N+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ EF RG +Y L K G F +++ ++Y H+ +IHRD+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLLM G +K+ADFG + V A S GT ++ PE+
Sbjct: 141 KPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL + E ++ + +E+ I +RH N+++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ EF RG +Y L K G F +++ ++Y H+ +IHRD+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKVIHRDI 141
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLLM G +K+ADFG + V A S GT ++ PE+
Sbjct: 142 KPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 184
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
K+ GS G + T S + V K + + + EV IMR +H+NVV+ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 177 TRPPNLCIVTEFMARGSIYDFL-HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V EF+ G++ D + H + Q+ + V + V + ++ LH +IHRD+K
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGVIHRDIK 274
Query: 236 TANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
+ ++L+ +G VK++DFG A+V + GT WMAPE+
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPEL 318
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 117 KVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G+YG ++K + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
L +V EF + + + G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 235 KTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEVAF 280
K NLL++ NG +K+ADFG+AR +AE T + P+V F
Sbjct: 128 KPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 176
Query: 278 V 278
+
Sbjct: 177 M 177
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPE 176
Query: 278 V 278
+
Sbjct: 177 M 177
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 139 KVLKPECVNTEMLK----EFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
K++ +C+ + L+ E+ ++ KI+H N+V +L ++ + ++ G +
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL---MDENGVVKVAD 251
+D + +KG + ++ V + YLH I+HRDLK NLL +DE+ + ++D
Sbjct: 104 FDRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+++++ V++ GT ++APEV
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEV 189
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVN-------TEMLKEFSQEVY----IMRK 163
K+ SG+YG+ L K E AIKV+K + + +++F +E+Y +++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMN 222
+ H N+++ +VTEF G +++ +++ K F + + G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGIC 160
Query: 223 YLHQNNIIHRDLKTANLLMDENGV---VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
YLH++NI+HRD+K N+L++ +K+ DFG++ ++ + GT ++APEV
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV 219
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 1 GPRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S T GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPE 176
Query: 278 V 278
+
Sbjct: 177 M 177
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 117 KVASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHKNVVQFI 173
K+ GSYG ++K Q VAIK E + ++K+ + +E+ ++++++H N+V +
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK-VAIDVSKGMNYLHQNNIIHR 232
R L +V E+ +++ Q+GV + L+K + + +N+ H++N IHR
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE--HLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 233 DLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETGTYRWMAPEV 278
D+K N+L+ ++ V+K+ DFG AR + S E T + +PE+
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPEL 173
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 110 KQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPE-CVNTEMLKEFSQEVYIMRKIRH 166
+ +I + +GS+G L + + + A+KVLK E V + ++ + E ++ + H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
+++ G + ++ +++ G ++ L K + + A +V + YLH
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA-EVCLALEYLHS 124
Query: 227 NNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVAFT 281
+II+RDLK N+L+D+NG +K+ DFG A+ V GT ++APEV T
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVST 177
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 23/222 (10%)
Query: 73 KRQPALGVPMHS--KLLIESSPN-------CIEIPTDGTDVWEIDAKQLKIECKVASGSY 123
KR P L +P + + S+P CI I G +E+ A L+ ++ G+Y
Sbjct: 8 KRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISI---GNQNFEVKADDLEPIMELGRGAY 64
Query: 124 GDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI-MRKIRHKNVVQFIGACTRPP 180
G + K + Q +A+K ++ VN++ K ++ I MR + V F GA R
Sbjct: 65 GVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG 123
Query: 181 NLCIVTEFMARGSIYDFLHKQ---KGVFQLTSLL-KVAIDVSKGMNYLHQN-NIIHRDLK 235
++ I E M + D +KQ KG +L K+A+ + K + +LH ++IHRD+K
Sbjct: 124 DVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVK 181
Query: 236 TANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+N+L++ G VK+ DFG++ S T + G +MAPE
Sbjct: 182 PSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 110 KQLKIECKVASGSYGDLYKGTYC---SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR- 165
+Q + ++ G+YG ++K + VA+K ++ + M +EV ++R +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 166 --HKNVVQFIGACT-----RPPNLCIVTEFMARGSIYDFLHK--QKGVFQLTSLLKVAID 216
H NVV+ CT R L +V E + + + +L K + GV ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQ 128
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAP 276
+ +G+++LH + ++HRDLK N+L+ +G +K+ADFG+AR+ + +T+ T + AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 277 EV 278
EV
Sbjct: 189 EV 190
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 110 KQLKIECKVASGSYGDLYKGTYC---SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR- 165
+Q + ++ G+YG ++K + VA+K ++ + M +EV ++R +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 166 --HKNVVQFIGACT-----RPPNLCIVTEFMARGSIYDFLHK--QKGVFQLTSLLKVAID 216
H NVV+ CT R L +V E + + + +L K + GV ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQ 128
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAP 276
+ +G+++LH + ++HRDLK N+L+ +G +K+ADFG+AR+ + +T+ T + AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 277 EV 278
EV
Sbjct: 189 EV 190
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y ++ +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 132 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 174
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ NG +K+ADFG + V A S GT ++ PE+
Sbjct: 139 KPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEM 181
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 110 KQLKIECKVASGSYGDLYKGTYC---SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR- 165
+Q + ++ G+YG ++K + VA+K ++ + M +EV ++R +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 166 --HKNVVQFIGACT-----RPPNLCIVTEFMARGSIYDFLHK--QKGVFQLTSLLKVAID 216
H NVV+ CT R L +V E + + + +L K + GV ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGV-PTETIKDMMFQ 128
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAP 276
+ +G+++LH + ++HRDLK N+L+ +G +K+ADFG+AR+ + +T+ T + AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 277 EV 278
EV
Sbjct: 189 EV 190
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKKVIHRDI 134
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S A GT ++ PE+
Sbjct: 135 KPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEM 177
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 133
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 134 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 176
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 112 LKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKN 168
+I + G +G++Y + +A+KVL K + + + +EV I +RH N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 169 VVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
+++ G + ++ E+ G++Y L K F +++ ++Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKR 132
Query: 229 IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+IHRD+K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 181
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 140 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 182
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S A GT ++ PE+
Sbjct: 135 KPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEM 177
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 138 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 138 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 161 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 151
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 152 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEM 194
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
K NLL+ G +K+ADFG + V A S T GT ++ PE
Sbjct: 140 KPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE 181
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 112 LKIECKVASGSYGDLY----KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK 167
++E ++ G+ +Y KGT + A+KVLK + V+ ++++ E+ ++ ++ H
Sbjct: 55 FEVESELGRGATSIVYRCKQKGT--QKPYALKVLK-KTVDKKIVR---TEIGVLLRLSHP 108
Query: 168 NVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN 227
N+++ P + +V E + G ++D + +KG + + + + YLH+N
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRI-VEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 228 NIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
I+HRDLK NLL + +K+ADFG++++ +M GT + APE+
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY-------CSQEVAIKVLKPECVNTEMLKEFSQEV 158
E+ +++ + ++ GS+G +Y+G VA+K + E + EF E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEA 70
Query: 159 YIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQ---------LTS 209
+M+ +VV+ +G ++ +V E MA G + +L + + L
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--------VQAQS 261
++++A +++ GM YL+ +HRDL N ++ + VK+ DFG+ R +
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 262 GVMTAETGTYRWMAPE 277
G++ RWMAPE
Sbjct: 191 GLLPV-----RWMAPE 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 136 KPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 178
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFMARGS 193
EV + L PE + E+ + +E +I+R++ H +++ I + + +V + M +G
Sbjct: 128 EVTAERLSPEQLE-EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
++D+L +K + + + +++LH NNI+HRDLK N+L+D+N ++++DFG
Sbjct: 187 LFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245
Query: 254 VARVQAQSGVMTAET-GTYRWMAPEV 278
+ + G E GT ++APE+
Sbjct: 246 FS-CHLEPGEKLRELCGTPGYLAPEI 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 135 KPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 177
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 117 KVASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ GS G L + + ++VA+K++ + + + EV IMR +H NVV+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ L ++ EF+ G++ D + + + + V V + + YLH +IHRD+
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 235 KTANLLMDENGVVKVADFGV-ARVQAQSGVMTAETGTYRWMAPEV 278
K+ ++L+ +G VK++DFG A++ GT WMAPEV
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEV 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 117 KVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G+YG ++K + VA+K ++ + + + +E+ ++++++HKN+V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
L +V EF + + + G + + KG+ + H N++HRDL
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDL 127
Query: 235 KTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEVAF 280
K NLL++ NG +K+A+FG+AR +AE T + P+V F
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 181 PNYIAPEV 188
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 135 KPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 177
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+D LK+ + G YG +YKG+ + VA+KV N + + +Y + + H
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFS--FANRQNFIN-EKNIYRVPLMEH 66
Query: 167 KNVVQFIGACTRPP-----NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
N+ +FI R +V E+ GS+ +L + S ++A V++G+
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW--VSSCRLAHSVTRGL 124
Query: 222 NYLH---------QNNIIHRDLKTANLLMDENGVVKVADFGVA---------RVQAQSGV 263
YLH + I HRDL + N+L+ +G ++DFG++ R +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 264 MTAETGTYRWMAPEV 278
+E GT R+MAPEV
Sbjct: 185 AISEVGTIRYMAPEV 199
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S T GT ++ PE+
Sbjct: 140 KPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEM 182
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 120
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 121 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 181 PNYIAPEV 188
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + A S T +GT ++ PE+
Sbjct: 136 KPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEM 178
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 118
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 179 PNYIAPEV 186
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 124
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 125 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 185 PNYIAPEV 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 142
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 143 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 203 PNYIAPEV 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G+ W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 4 GSRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 120
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S GT ++ PE
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE 179
Query: 278 V 278
+
Sbjct: 180 M 180
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+M G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G +KVADFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I R + H++VV F G + +V E R S+ + LHK++
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR 144
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+ G YLH+N +IHRDLK NL ++E+ VK+ DFG+A +V+ GT
Sbjct: 145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 205 PNYIAPEV 212
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+M G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G +KVADFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 101 GTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQE 157
G W ++ +I + G +G++Y + +A+KVL K + + + +E
Sbjct: 1 GKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 158 VYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDV 217
V I +RH N+++ G + ++ E+ G++Y L K F ++
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITEL 117
Query: 218 SKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ ++Y H +IHRD+K NLL+ G +K+ADFG + V A S GT ++ PE
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE 176
Query: 278 V 278
+
Sbjct: 177 M 177
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 26/189 (13%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+D K++++ + SG +G ++K + + V+K N E + +EV + K+ H
Sbjct: 11 MDFKEIEL---IGSGGFGQVFKAKH-RIDGKTYVIKRVKYNNE---KAEREVKALAKLDH 63
Query: 167 KNVVQFIGA--------------CTRPPNLC--IVTEFMARGSIYDFLHKQKGVFQLTSL 210
N+V + G +R C I EF +G++ ++ K++G +L +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKV 122
Query: 211 LKVAI--DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET 268
L + + ++KG++Y+H +I+RDLK +N+ + + VK+ DFG+ G
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 269 GTYRWMAPE 277
GT R+M+PE
Sbjct: 183 GTLRYMSPE 191
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 108 DAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
D + LK + ++ GS+ +YKG T + EVA L+ + + F +E ++ ++
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 166 HKNVVQFIGA--CTRPPNLCI--VTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
H N+V+F + T CI VTE G++ +L + K V ++ L + KG+
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGL 142
Query: 222 NYLHQNN--IIHRDLKTANLLMD-ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+LH IIHRDLK N+ + G VK+ D G+A ++ ++ A GT + APE
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK-RASFAKAVIGTPEFXAPE 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQFIG 174
+ GS+G+ L K QE A+KV+ V + KE +EV +++++ H N+ +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+V E G ++D + +K F ++ V G+ Y H+N I+HRDL
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 235 KTANLLMD---ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL++ ++ +++ DFG++ S + GT ++APEV
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+A+FG + V A S T GT ++ PE+
Sbjct: 137 KPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEM 179
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF++ + DF+ L+K + + +G+ + H + +
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+++ H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 9 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF++ + DF+ L+K + + +G+ + H + +
Sbjct: 68 KLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + DF+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+A+FG + V A S T GT ++ PE+
Sbjct: 138 KPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEM 180
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 137 KPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEM 179
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 136 KPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEM 178
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 112 LKIECKVASGSYGDLYKGTYCSQEVAIKVLKPE---CVNTEMLKEFSQEVYIMRKIRHKN 168
+IE K+ G + ++Y+ V + + K + ++ + + +E+ +++++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 169 VVQFIGACTRPPNLCIVTEFMARGSIYDFLH---KQKGVFQLTSLLKVAIDVSKGMNYLH 225
V+++ + L IV E G + + KQK + ++ K + + + ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 226 QNNIIHRDLKTANLLMDENGVVKVADFGVAR-VQAQSGVMTAETGTYRWMAPE 277
++HRD+K AN+ + GVVK+ D G+ R +++ + GT +M+PE
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 138 KPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEM 180
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 39/202 (19%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+D K++++ + SG +G ++K + + V++ N E + +EV + K+ H
Sbjct: 12 MDFKEIEL---IGSGGFGQVFKAKH-RIDGKTYVIRRVKYNNEKAE---REVKALAKLDH 64
Query: 167 KNVVQFIGA---------------------------CTRPPNLC--IVTEFMARGSIYDF 197
N+V + G +R C I EF +G++ +
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 198 LHKQKGVFQLTSLLKVAI--DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA 255
+ K++G +L +L + + ++KG++Y+H +IHRDLK +N+ + + VK+ DFG+
Sbjct: 125 IEKRRGE-KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 256 RVQAQSGVMTAETGTYRWMAPE 277
G T GT R+M+PE
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPE 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 107 IDAKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
+D + + K+ G+YG +YK + VA+K ++ + + +E+ +++++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 165 RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNY 223
H N+V+ + L +V EF+ + + F+ L+K + + +G+ +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
H + ++HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 178
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 128 KGTYCSQEVAIKVLKPECVNTEML----KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLC 183
KGT +E A K +K +++ +E +EV I+R+IRH N++ ++
Sbjct: 34 KGT--GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 91
Query: 184 IVTEFMARGSIYDFLHKQKGVF--QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
++ E ++ G ++DFL +++ + + T LK +D G++YLH I H DLK N+++
Sbjct: 92 LILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHSKRIAHFDLKPENIML 148
Query: 242 DENGV----VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ V +K+ DFG+A GT ++APE+
Sbjct: 149 LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 106 EIDAKQLKIECKVASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMR 162
+++ +I + GS+G + + + A+K + K +CV ++ +E+ IM+
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGM 221
+ H +V + ++ +V + + G + H Q+ V +K+ I ++ +
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKEETVKLFICELVMAL 128
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+YL IIHRD+K N+L+DE+G V + DF +A + + +T GT +MAPE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEM 185
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 14 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 72
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 14 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 72
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 8 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y + +A+KVL K + + + +EV I +RH N+++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ G++Y L K F +++ ++Y H +IHRD+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 161 KPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEM 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 116 CKVASGSYGDLYKG--TYCSQEVAIKVLK-PECVNTEMLKEFS--QEVYIMRKIR---HK 167
++ G+YG +YK + VA+K ++ P S +EV ++R++ H
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 168 NVVQFIGACT-----RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK-VAIDVSKGM 221
NVV+ + C R + +V E + + + +L K +K + +G+
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
++LH N I+HRDLK N+L+ G VK+ADFG+AR+ + +T T + APEV
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 128 KGTYCSQEVAIKVLKPECVNTEML----KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLC 183
KGT +E A K +K +++ +E +EV I+R+IRH N++ ++
Sbjct: 27 KGT--GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84
Query: 184 IVTEFMARGSIYDFLHKQKGVF--QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
++ E ++ G ++DFL +++ + + T LK +D G++YLH I H DLK N+++
Sbjct: 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHSKRIAHFDLKPENIML 141
Query: 242 DENGV----VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ V +K+ DFG+A GT ++APE+
Sbjct: 142 LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G +KVADFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T + A
Sbjct: 142 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWYRA 197
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 198 PEIMLNWM 205
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T + A
Sbjct: 142 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWYRA 197
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 198 PEIMLNWM 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR A MT T + A
Sbjct: 142 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--MTGYVATRWYRA 197
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 198 PEIMLNW 204
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 117 KVASGSYGDLYKGTYCSQEV-AIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
K+ G+YG +YK E A+K ++ E + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V E + + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 236 TANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
NLL++ G +K+ADFG+AR T E T + AP+V
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 154
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+DE G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 155 KPENLLIDEQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 196
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 137 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 117 KVASGSYGDLYKGTYCSQEV-AIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
K+ G+YG +YK E A+K ++ E + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V E + + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 236 TANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
NLL++ G +K+ADFG+AR T E T + AP+V
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 135 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 117 KVASGSYGDLYKGTYCSQEV-AIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
K+ G+YG +YK E A+K ++ E + + +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
L +V E + + + L +G + + + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 236 TANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
NLL++ G +K+ADFG+AR T E T + AP+V
Sbjct: 128 PQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPEC-VNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L K + A+K+LK E V + + E +++ RH +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH-QNNIIHRD 233
+ LC V E+ G ++ L +++ VF ++ ++YLH + N+++RD
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
LK NL++D++G +K+ DFG+ + + G M GT ++APEV
Sbjct: 137 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 128 KGTYCSQEVAIKVLKPECVNTEML----KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLC 183
KGT +E A K +K + + +E +EV I+R+IRH N++ ++
Sbjct: 48 KGT--GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 105
Query: 184 IVTEFMARGSIYDFLHKQKGVF--QLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
++ E ++ G ++DFL +++ + + T LK +D G++YLH I H DLK N+++
Sbjct: 106 LILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLHSKRIAHFDLKPENIML 162
Query: 242 DENGV----VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ V +K+ DFG+A GT ++APE+
Sbjct: 163 LDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPEC-VNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L K + A+K+LK E V + + E +++ RH +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH-QNNIIHRD 233
+ LC V E+ G ++ L +++ VF ++ ++YLH + N+++RD
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
LK NL++D++G +K+ DFG+ + + G M GT ++APEV
Sbjct: 136 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPEC-VNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L K + A+K+LK E V + + E +++ RH +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH-QNNIIHRD 233
+ LC V E+ G ++ L +++ VF ++ ++YLH + N+++RD
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
LK NL++D++G +K+ DFG+ + + G M GT ++APEV
Sbjct: 135 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECV-NTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L + + A+K+L+ E + + + E +++ RH +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A LC V E+ G ++ L +++ VF ++ + YLH ++++RD+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
K NL++D++G +K+ DFG+ + G M GT ++APEV
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFS-QEVYIMRKIRHK 167
+ Q K K+ +G+Y +YKG + V + + + + + E + +E+ +M++++H+
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 168 NVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ------KGVFQLTSLLKVAIDVSKGM 221
N+V+ L +V EFM + ++ + +G+ +L + + +G+
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGL-ELNLVKYFQWQLLQGL 121
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
+ H+N I+HRDLK NLL+++ G +K+ DFG+AR ++E T + AP+V
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPEC-VNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L K + A+K+LK E V + + E +++ RH +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH-QNNIIHRD 233
+ LC V E+ G ++ L +++ VF ++ ++YLH + N+++RD
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
LK NL++D++G +K+ DFG+ + + G M GT ++APEV
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPEC-VNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G L K + A+K+LK E V + + E +++ RH +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH-QNNIIHRD 233
+ LC V E+ G ++ L +++ VF ++ ++YLH + N+++RD
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSG-VMTAETGTYRWMAPEV 278
LK NL++D++G +K+ DFG+ + + G M GT ++APEV
Sbjct: 278 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 155 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 210
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 211 PEIMLNW 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 141 --LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 197 PEIMLNW 203
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 137 --LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 193 PEIMLNW 199
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 27 IWEVPERYQNL-APVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 145 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 200
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 201 PEIMLNW 207
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 154 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 209
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 210 PEIMLNW 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 98 PTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEV--AIKVLKPECV--NTEMLKE 153
P+ D LK+ + GS+G + + ++EV A+KVL+ + + E
Sbjct: 29 PSSNPHAKPSDFHFLKV---IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI 85
Query: 154 FSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKV 213
S+ +++ ++H +V + L V +++ G ++ L +++ + +
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-Y 144
Query: 214 AIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYR 272
A +++ + YLH NI++RDLK N+L+D G + + DFG+ + + T+ GT
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPE 204
Query: 273 WMAPEV 278
++APEV
Sbjct: 205 YLAPEV 210
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 117 KVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ G+Y +YKG VA+K ++ E +EV +++ ++H N+V
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHD 67
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+L +V E++ + + +L + + ++ + +G+ Y H+ ++HRDL
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDL 126
Query: 235 KTANLLMDENGVVKVADFGVARVQA 259
K NLL++E G +K+ADFG+AR ++
Sbjct: 127 KPQNLLINERGELKLADFGLARAKS 151
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 116 CKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR---HKNVV 170
++ G+YG +YK + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 171 QFIGACT-----RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK-VAIDVSKGMNYL 224
+ + C R + +V E + + + +L K +K + +G+++L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
H N I+HRDLK N+L+ G VK+ADFG+AR+ + + T + APEV
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 108 DAKQLKIECKVASGSYGDLY-----KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D Q ++ + GS+G ++ G+ Q A+KVLK + E I+
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
++ H +V+ A L ++ +F+ G ++ L K+ +F + +++ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALD 140
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
+LH II+RDLK N+L+DE G +K+ DFG+++ + GT +MAPEV
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 141 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 197 PEIMLNW 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 108 DAKQLKIECKVASGSYGDLY-----KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D Q ++ + GS+G ++ G+ Q A+KVLK + E I+
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
++ H +V+ A L ++ +F+ G ++ L K+ +F + +++ ++
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALD 141
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
+LH II+RDLK N+L+DE G +K+ DFG+++ + GT +MAPEV
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 108 DAKQLKIECKVASGSYGDLY-----KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMR 162
D Q ++ + GS+G ++ G+ Q A+KVLK + E I+
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
++ H +V+ A L ++ +F+ G ++ L K+ +F + +++ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALD 140
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQA-QSGVMTAETGTYRWMAPEV 278
+LH II+RDLK N+L+DE G +K+ DFG+++ + GT +MAPEV
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAPEI 209
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 131 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 186
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 187 PEIMLNW 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAPEI 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 110 KQLKIECKVASGSYGDLYKG--TYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRH 166
+ K+ + GS+ +Y+ + EVAIK++ K M++ EV I +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
++++ + +V E G + +L + F + GM YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 227 NNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEVA 279
+ I+HRDL +NLL+ N +K+ADFG+A +++ GT +++PE+A
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 116 CKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR---HKNVV 170
++ G+YG +YK + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 171 QFIGACT-----RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK-VAIDVSKGMNYL 224
+ + C R + +V E + + + +L K +K + +G+++L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
H N I+HRDLK N+L+ G VK+ADFG+AR+ + + T + APEV
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 146 --LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 201
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 202 PEIMLNW 208
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 140 --LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 196 PEIMLNW 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 97 IPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEF 154
+PT WE+ + + +G +G + + + ++VAIK + E ++ + + +
Sbjct: 9 LPTQTCGPWEMKER-------LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 60
Query: 155 SQEVYIMRKIRHKNVVQFI----GACTRPPN--LCIVTEFMARGSIYDFLHKQKGVFQLT 208
E+ IM+K+ H NVV G PN + E+ G + +L++ + L
Sbjct: 61 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 209 S--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD---ENGVVKVADFGVARVQAQSGV 263
+ + D+S + YLH+N IIHRDLK N+++ + + K+ D G A+ Q +
Sbjct: 121 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 264 MTAETGTYRWMAPEV 278
T GT +++APE+
Sbjct: 181 CTEFVGTLQYLAPEL 195
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 97 IPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEF 154
+PT WE+ + + +G +G + + + ++VAIK + E ++ + + +
Sbjct: 8 LPTQTCGPWEMKER-------LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERW 59
Query: 155 SQEVYIMRKIRHKNVVQFI----GACTRPPN--LCIVTEFMARGSIYDFLHKQKGVFQLT 208
E+ IM+K+ H NVV G PN + E+ G + +L++ + L
Sbjct: 60 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 209 S--LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD---ENGVVKVADFGVARVQAQSGV 263
+ + D+S + YLH+N IIHRDLK N+++ + + K+ D G A+ Q +
Sbjct: 120 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 264 MTAETGTYRWMAPEV 278
T GT +++APE+
Sbjct: 180 CTEFVGTLQYLAPEL 194
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+ R MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 191 PEIMLNWM 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 114 IECKVASGSYGDL----YKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNV 169
+E + GS+G++ KGT + A K+ K E + F QE+ IM+ + H N+
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRI-RRAAKKIPK---YFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
++ ++ +V E G +++ +HK+ VF+ + ++ DV + Y H+ N
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN 126
Query: 229 IIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L + +K+ DFG+A +M + GT +++P+V
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
+E +EV I+R++ H NV+ ++ ++ E ++ G ++DFL +++ + + TS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMT 265
+K +D G+NYLH I H DLK N +L+D+N +K+ DFG+A + + GV
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEF 175
Query: 266 AET-GTYRWMAPEV 278
GT ++APE+
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 116 CKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR---HKNVV 170
++ G+YG +YK + VA+K ++ + +EV ++R++ H NVV
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 171 QFIGACT-----RPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK-VAIDVSKGMNYL 224
+ + C R + +V E + + + +L K +K + +G+++L
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
H N I+HRDLK N+L+ G VK+ADFG+AR+ + + T + APEV
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF++ + F+ L+K + + +G+ + H + +
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 8 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF++ + F+ L+K + + +G+ + H + +
Sbjct: 67 KLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL---------KVAIDVSKGM 221
+ + L +V ++FLH+ F S L + +G+
Sbjct: 69 KLLDVIHTENKLYLV---------FEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 222 NYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+ H + ++HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 33/191 (17%)
Query: 118 VASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF--- 172
+ G++G + K S+ AIK ++ E L EV ++ + H+ VV++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 173 ----------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
+ A + L I E+ G++YD +H + Q ++ + + ++
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR---------------VQAQSGVMTAE 267
Y+H IIHRDLK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 268 TGTYRWMAPEV 278
GT ++A EV
Sbjct: 191 IGTAMYVATEV 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 147 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 203 PEIMLNW 209
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 114 IECKVASGSYGDL----YKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNV 169
+E + GS+G++ KGT + A K+ K E + F QE+ IM+ + H N+
Sbjct: 30 LENTIGRGSWGEVKIAVQKGTRI-RRAAKKIPK---YFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYD-FLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
++ ++ +V E G +++ +HK+ VF+ + ++ DV + Y H+ N
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN 143
Query: 229 IIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L + +K+ DFG+A +M + GT +++P+V
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 196
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 8 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 11 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 69
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 9 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 137 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 193 PEIMLNW 199
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 118 VASGSYGDLYKGTY--CSQEVAIKV------LKPECVNTEMLKEFSQEVYIMRKIRHKNV 169
+ G+ ++++G + AIKV L+P V+ +M +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQM-----REFEVLKKLNHKNI 69
Query: 170 VQF--IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--TSLLKVAIDVSKGMNYLH 225
V+ I T + ++ EF GS+Y L + + L + L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 226 QNNIIHRDLKTANLLM----DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+N I+HR++K N++ D V K+ DFG AR + GT ++ P++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 9 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 8 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 162
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + + SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEVPERYQNL-SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 140 --LRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 196 PEIMLNW 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 8 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 66
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
WE+ A ++ V SG+YG + +VAIK L + K +E+ ++
Sbjct: 20 AWEVRAVYRDLQ-PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 78
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ +RH+NV+ + T L +V FM H++ G ++ L+ +
Sbjct: 79 KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
KG+ Y+H IIHRDLK NL ++E+ +K+ DFG+AR QA S M T + A
Sbjct: 139 ---KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-QADSE-MXGXVVTRWYRA 193
Query: 276 PEVAFTF 282
PEV +
Sbjct: 194 PEVILNW 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+ ++ + + +E+ +++++ H N+V
Sbjct: 7 KVE-KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 65
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+ ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI----YDFLHKQKGVFQLTSLLK 212
E I+ K+ + +V A +LC+V M G I Y+ G FQ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIF 293
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTY 271
+ G+ +LHQ NII+RDLK N+L+D++G V+++D G+A ++A GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 272 RWMAPEV 278
+MAPE+
Sbjct: 354 GFMAPEL 360
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 9 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 67
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V EF+ + + F+ L+K + + +G+ + H + +
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
+E +EV I+R++ H NV+ ++ ++ E ++ G ++DFL +++ + + TS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMT 265
+K +D G+NYLH I H DLK N +L+D+N +K+ DFG+A + + GV
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEF 175
Query: 266 AET-GTYRWMAPEV 278
GT ++APE+
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 36 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 154 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 209
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 210 PEIMLNW 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 104
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ +VT M +Y L Q + + +G+ Y+
Sbjct: 105 G-INDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQH--LSNDHICYFLYQILRGLKYI 160
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 158 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 213
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 214 PEIMLNWM 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 147 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 203 PEIMLNW 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 29 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 147 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 202
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 203 PEIMLNW 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 141 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 197 PEIMLNW 203
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 155 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 210
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 211 PEIMLNW 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 137 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 193 PEIMLNW 199
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI----YDFLHKQKGVFQLTSLLK 212
E I+ K+ + +V A +LC+V M G I Y+ G FQ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIF 293
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTY 271
+ G+ +LHQ NII+RDLK N+L+D++G V+++D G+A ++A GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 272 RWMAPEV 278
+MAPE+
Sbjct: 354 GFMAPEL 360
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI----YDFLHKQKGVFQLTSLLK 212
E I+ K+ + +V A +LC+V M G I Y+ G FQ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIF 293
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTY 271
+ G+ +LHQ NII+RDLK N+L+D++G V+++D G+A ++A GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 272 RWMAPEV 278
+MAPE+
Sbjct: 354 GFMAPEL 360
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
+E +EV I+R++ H NV+ ++ ++ E ++ G ++DFL +++ + + TS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMT 265
+K +D G+NYLH I H DLK N +L+D+N +K+ DFG+A + + GV
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEF 175
Query: 266 AET-GTYRWMAPEV 278
GT ++APE+
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 19 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 137 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 192
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 193 PEIMLNW 199
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI----YDFLHKQKGVFQLTSLLK 212
E I+ K+ + +V A +LC+V M G I Y+ G FQ +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIF 293
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTY 271
+ G+ +LHQ NII+RDLK N+L+D++G V+++D G+A ++A GT
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 272 RWMAPEV 278
+MAPE+
Sbjct: 354 GFMAPEL 360
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 28 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 146 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 201
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 202 PEIMLNW 208
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
+E +EV I+R++ H NV+ ++ ++ E ++ G ++DFL +++ + + TS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMT 265
+K +D G+NYLH I H DLK N +L+D+N +K+ DFG+A + + GV
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEF 175
Query: 266 AET-GTYRWMAPEV 278
GT ++APE+
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 140 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 196 PEIMLNW 202
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 24 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 142 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 197
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 198 PEIMLNW 204
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 22 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 140 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 195
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 196 PEIMLNW 202
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I + + +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G +KVADFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 16 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 134 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 189
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 190 PEIMLNW 196
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
+E +EV I+R++ H NV+ ++ ++ E ++ G ++DFL +++ + + TS
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMT 265
+K +D G+NYLH I H DLK N +L+D+N +K+ DFG+A + + GV
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEF 175
Query: 266 AET-GTYRWMAPEV 278
GT ++APE+
Sbjct: 176 KNIFGTPEFVAPEI 189
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 15 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 133 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 188
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 189 PEIMLNW 195
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 132 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 187
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 188 PEIMLNW 194
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 23 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 141 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 196
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 197 PEIMLNW 203
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 14 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 132 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 187
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 188 PEIMLNW 194
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 118 VASGSYGDLYKGTY--CSQEVAIKV------LKPECVNTEMLKEFSQEVYIMRKIRHKNV 169
+ G+ ++++G + AIKV L+P V+ +M +E +++K+ HKN+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQM-----REFEVLKKLNHKNI 69
Query: 170 VQF--IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQL--TSLLKVAIDVSKGMNYLH 225
V+ I T + ++ EF GS+Y L + + L + L V DV GMN+L
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 226 QNNIIHRDLKTANLLM----DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+N I+HR++K N++ D V K+ DFG AR GT ++ P++
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 153 EFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDF------LHKQKGVFQ 206
+F E+ I+ I+++ + G T + I+ E+M SI F L K F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 207 LTSLLKVAI-DVSKGMNYLH-QNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVM 264
++K I V +Y+H + NI HRD+K +N+LMD+NG VK++DFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI- 207
Query: 265 TAETGTYRWMAPE 277
GTY +M PE
Sbjct: 208 KGSRGTYEFMPPE 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 131 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 186
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 187 PEIMLNW 193
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 37 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR M T + A
Sbjct: 155 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVATRWYRA 210
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 211 PEIMLNWM 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ + + GT ++APE+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGATWTL---CGTPEYLAPEI 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
VWE+ ++L+ V SG+YG + Q+VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMA-------RGSIYDFLHKQKGVFQLT 208
+ ++H+NV+ + T ++ +VT M + H Q V+QL
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET 268
+G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT
Sbjct: 142 ----------RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYV 189
Query: 269 GTYRWMAPEVAFTFF 283
T + APE+ +
Sbjct: 190 ATRWYRAPEIMLNWM 204
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA------- 214
+ ++H+NV+ + T +L EF +Y H L +++K A
Sbjct: 72 KHMKHENVIGLLDVFTPARSL---EEF---NDVYLVTHLMGA--DLNNIVKCAKLTDDHV 123
Query: 215 ----IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT 270
+ +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 181
Query: 271 YRWMAPEVAFTF 282
+ APE+ +
Sbjct: 182 RWYRAPEIMLNW 193
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEV 278
PE+
Sbjct: 191 PEI 193
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 108 DAKQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKI 164
D+ + ++ + +G++G L + ++ VA+K ++ E + E +E+ R +
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE----RGEKIDENVKREIINHRSL 72
Query: 165 RHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
RH N+V+F P +L IV E+ + G +++ + G F + G++Y
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYA 131
Query: 225 HQNNIIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
H + HRDLK N L+D + +K+ADFG ++ + GT ++APEV
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEV 187
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI-YDFLHKQKGVFQLTSLLKVAI 215
E I+ K+ + VV A LC+V M G + + H + F + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
++ G+ LH+ I++RDLK N+L+D++G ++++D G+A + + GT +MA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 276 PEV 278
PEV
Sbjct: 354 PEV 356
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 121
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 274 MAPEV 278
+APEV
Sbjct: 182 LAPEV 186
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 122
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 274 MAPEV 278
+APEV
Sbjct: 183 LAPEV 187
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 118 VASGSYGDLYK--GTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G +G ++K T ++A K++K + + +E E+ +M ++ H N++Q A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKNEISVMNQLDHANLIQLYDA 154
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI--DVSKGMNYLHQNNIIHRD 233
++ +V E++ G ++D + + + LT L + + +G+ ++HQ I+H D
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 234 LKTANLL--MDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
LK N+L + +K+ DFG+AR + GT ++APEV
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEV 259
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 122
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 274 MAPEV 278
+APEV
Sbjct: 183 LAPEV 187
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 116 CKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
K+ G+YG++YK T ++ VAIK ++ E + +EV ++++++H+N+++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
L ++ E+ A + ++ K V + + + G+N+ H +HRD
Sbjct: 100 SVIHHNHRLHLIFEY-AENDLKKYMDKNPDV-SMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 234 LKTANLLM-----DENGVVKVADFGVARV 257
LK NLL+ E V+K+ DFG+AR
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARA 186
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 122
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 274 MAPEV 278
+APEV
Sbjct: 183 LAPEV 187
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T L +V E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLXQVIQMELDHERMSYLLYQML---XGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 128
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 274 MAPEV 278
+APEV
Sbjct: 189 LAPEV 193
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 247
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 274 MAPEV 278
+APEV
Sbjct: 308 LAPEV 312
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI-YDFLHKQKGVFQLTSLLKVAI 215
E I+ K+ + VV A LC+V M G + + H + F + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
++ G+ LH+ I++RDLK N+L+D++G ++++D G+A + + GT +MA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 276 PEV 278
PEV
Sbjct: 354 PEV 356
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
E+ + Q I K S G Y + + + + C +E +EV I+R++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVC-----REEIEREVSILRQVL 73
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTSLLKVAIDVSKGMNY 223
H N++ ++ ++ E ++ G ++DFL +++ + + TS +K +D G+NY
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNY 130
Query: 224 LHQNNIIHRDLKTAN-LLMDEN---GVVKVADFGVARVQAQSGVMTAET-GTYRWMAPEV 278
LH I H DLK N +L+D+N +K+ DFG+A + + GV GT ++APE+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEI 189
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLIIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAID 216
E+ I++K+ H +++ I + IV E M G ++D + K + + T L
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQ 261
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + YLH+N IIHRDLK N+L+ +E+ ++K+ DFG +++ ++ +M GT +
Sbjct: 262 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 274 MAPEV 278
+APEV
Sbjct: 322 LAPEV 326
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY-----IMRKIRHKNVVQF 172
+ G +G++Y C + K+ +C++ + +K E IM + F
Sbjct: 197 IGRGGFGEVYG---CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 173 I----GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
I A P L + + M G ++ L Q GVF + A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 229 IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++RDLK AN+L+DE+G V+++D G+A A GT+ +MAPEV
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEV 361
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY-----IMRKIRHKNVVQF 172
+ G +G++Y C + K+ +C++ + +K E IM + F
Sbjct: 197 IGRGGFGEVYG---CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 173 I----GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
I A P L + + M G ++ L Q GVF + A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 229 IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++RDLK AN+L+DE+G V+++D G+A A GT+ +MAPEV
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEV 361
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY-----IMRKIRHKNVVQF 172
+ G +G++Y C + K+ +C++ + +K E IM + F
Sbjct: 197 IGRGGFGEVYG---CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 173 I----GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
I A P L + + M G ++ L Q GVF + A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF 312
Query: 229 IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++RDLK AN+L+DE+G V+++D G+A A GT+ +MAPEV
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEV 361
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIV 185
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 186 TEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG 245
E M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ +
Sbjct: 108 MELMD-ANLSQVIQMELDHERMSYLLYQML---VGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 246 VVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K+ DFG+AR S +MT T + APEV
Sbjct: 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 118 VASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ SG++G L + + VA+K ++ E ++ +E+ R +RH N+V+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRHPNIVRFKEV 84
Query: 176 CTRPPNLCIVTEFMARGSIYDFL------HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNI 229
P +L I+ E+ + G +Y+ + + + F LL G++Y H I
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCHSMQI 137
Query: 230 IHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
HRDLK N L+D + +K+ DFG ++ + GT ++APEV
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 188
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIV 185
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV
Sbjct: 48 LERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 186 TEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENG 245
E M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ +
Sbjct: 108 MELMD-ANLSQVIQMELDHERMSYLL---YQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
Query: 246 VVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K+ DFG+AR S +MT T + APEV
Sbjct: 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVY-----IMRKIRHKNVVQF 172
+ G +G++Y C + K+ +C++ + +K E IM + F
Sbjct: 196 IGRGGFGEVYG---CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 173 I----GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNN 228
I A P L + + M G ++ L Q GVF + A ++ G+ ++H
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRF 311
Query: 229 IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++RDLK AN+L+DE+G V+++D G+A A GT+ +MAPEV
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAPEV 360
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT E T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-REIKILLRFRHENII 88
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 89 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLSQVIQMELDHERMSYLLYQML---VGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 153
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 154 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAPEI 195
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T YR A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYR--A 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T YR A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYR--A 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 13 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR T YR A
Sbjct: 131 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYR--A 186
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 187 PEIMLNW 193
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 181 NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L V E++ G + + +Q G F+ + A ++S G+ +LH+ II+RDLK N++
Sbjct: 94 RLYFVMEYVNGGDLM-YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVM 152
Query: 241 MDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
+D G +K+ADFG+ + GV T E GT ++APE+
Sbjct: 153 LDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ D+G+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAPEI 210
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 140
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 89 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 6 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 64
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V E + + + F+ L+K + + +G+ + H + +
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR T E T + APE+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
WE+ K V SG+YG + ++VAIK L + K +E+ ++
Sbjct: 37 AWEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL 95
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEF-MARGSIYDFLHKQKGV-FQLTSLLKVAIDVSK 219
+ ++H+NV+ + T +L +F + + L K G+ F + + + K
Sbjct: 96 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLK 155
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVA 279
G+ Y+H ++HRDLK NL ++E+ +K+ DFG+AR MT T + APEV
Sbjct: 156 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 213
Query: 280 FTF 282
++
Sbjct: 214 LSW 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL---EEFQDVYI 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L+ ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT +APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEALAPEI 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 140
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
WE+ K V SG+YG + ++VAIK L + K +E+ ++
Sbjct: 19 AWEL-PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL 77
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEF-MARGSIYDFLHKQKGV-FQLTSLLKVAIDVSK 219
+ ++H+NV+ + T +L +F + + L K G+ F + + + K
Sbjct: 78 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLK 137
Query: 220 GMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVA 279
G+ Y+H ++HRDLK NL ++E+ +K+ DFG+AR MT T + APEV
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 195
Query: 280 FTF 282
++
Sbjct: 196 LSW 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 140
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQ 156
+WE+ ++ + V SG+YG + CS ++A+K L + K +
Sbjct: 46 IWEV-PERYQTLSPVGSGAYGSV-----CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR 99
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSL 210
E+ +++ ++H+NV+ + T +L +VT M + + + QK
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQF 158
Query: 211 LKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGT 270
L + +G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR MT T
Sbjct: 159 L--IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVAT 214
Query: 271 YRWMAPEVAFTF 282
+ APE+ +
Sbjct: 215 RWYRAPEIMLNW 226
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 202
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T L +V E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLXQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
VWE+ ++L+ V SG+YG + Q+VA+K L + + +E+ ++
Sbjct: 23 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 81
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMA-------RGSIYDFLHKQKGVFQLT 208
+ ++H+NV+ + T ++ +VT M + H Q V+QL
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET 268
+G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT
Sbjct: 142 ----------RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYV 189
Query: 269 GTYRWMAPEVAFTFF 283
T + APE+ +
Sbjct: 190 ATRWYRAPEIMLNWM 204
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 19/171 (11%)
Query: 118 VASGSYGD----LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM-RKIRHKNVVQF 172
+ GSY + ++K T + E A+KV+ + ++ S+E+ I+ R +H N++
Sbjct: 35 IGVGSYSECKRCVHKAT--NMEYAVKVID------KSKRDPSEEIEILLRYGQHPNIITL 86
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
++ +VTE M G + D + +QK F V + K + YLH ++HR
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHR 145
Query: 233 DLKTANLL-MDENG---VVKVADFGVAR-VQAQSGVMTAETGTYRWMAPEV 278
DLK +N+L +DE+G +++ DFG A+ ++A++G++ T ++APEV
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEV 196
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG+A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 89
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 90 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 145
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 37 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 90
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 91 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 146
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 28 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 81
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 82 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 137
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 89 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYI 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L+ ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 39 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 92
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 93 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 148
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 140
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 82
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 83 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 138
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T L +V E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLXQVIQMELDHERMSYLL---YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 85 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 140
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 82
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 83 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 138
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 19/171 (11%)
Query: 118 VASGSYGD----LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM-RKIRHKNVVQF 172
+ GSY + ++K T + E A+KV+ + ++ S+E+ I+ R +H N++
Sbjct: 35 IGVGSYSECKRCVHKAT--NMEYAVKVID------KSKRDPSEEIEILLRYGQHPNIITL 86
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
++ +VTE M G + D + +QK F V + K + YLH ++HR
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQGVVHR 145
Query: 233 DLKTANLL-MDENG---VVKVADFGVAR-VQAQSGVMTAETGTYRWMAPEV 278
DLK +N+L +DE+G +++ DFG A+ ++A++G++ T ++APEV
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEV 196
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T L +V E
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 103 LMD-ANLXQVIQMELDHERMSYLL---YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTL 158
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 86
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 87 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 142
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 40 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DFG+AR M T + A
Sbjct: 158 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVATRWYRA 213
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 214 PEIMLNW 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E++A G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NLL+D+ G ++V DFG A RV+ ++ + GT ++AP +
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPAI 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 130
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 104
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 105 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 160
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 108 DAKQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
D+ + ++ + SG++G L + ++ VA+K ++ ++ +E+ R +R
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLR 73
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H N+V+F P +L IV E+ + G +++ + G F + G++Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 226 QNNIIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L+D + +K+ DFG ++ + GT ++APEV
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHKNVVQFIG 174
+ GSY L + + A+KV+K E VN + ++ Q E ++ + + + +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 175 ACTRPPN-LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+C + + L V E++ G + + +Q+ + + + A ++S +NYLH+ II+RD
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERGIIYRD 135
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
LK N+L+D G +K+ D+G+ + + G T+ GT ++APE+
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 181
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHKNVVQFIG 174
+ GSY L + + A+KV+K E VN + ++ Q E ++ + + + +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 175 ACTRPPN-LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+C + + L V E++ G + + +Q+ + + + A ++S +NYLH+ II+RD
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERGIIYRD 131
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
LK N+L+D G +K+ D+G+ + + G T+ GT ++APE+
Sbjct: 132 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 177
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPP------NLCIVTEF 188
VAIK + P T + +E+ I+ RH+N++ I R P ++ IV +
Sbjct: 52 RVAIKKISPFEHQTYCQRTL-REIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDL 109
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
M +Y L Q + + +G+ Y+H N++HRDLK +NLL++ +K
Sbjct: 110 M-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLK 166
Query: 249 VADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
+ DFG+ARV +G +T T + APE+
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ DF +AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHKNVVQFIG 174
+ GSY L + + A+KV+K E VN + ++ Q E ++ + + + +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 175 ACTRPPN-LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+C + + L V E++ G + + +Q+ + + + A ++S +NYLH+ II+RD
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERGIIYRD 146
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
LK N+L+D G +K+ D+G+ + + G T+ GT ++APE+
Sbjct: 147 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 192
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + + H+NVV+F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 131
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 111
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 170
Query: 275 APE 277
+PE
Sbjct: 171 SPE 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 111
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 170
Query: 275 APE 277
+PE
Sbjct: 171 SPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 111
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 170
Query: 275 APE 277
+PE
Sbjct: 171 SPE 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL---EEFQDVYL 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 115 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ A GT ++++PE+
Sbjct: 174 FGTAKVLSPESKQARANAFVGTAQYVSPEL 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 111
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 170
Query: 275 APE 277
+PE
Sbjct: 171 SPE 173
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++R +H N++ + +VTE M G + D + +QK F V ++K
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITK 127
Query: 220 GMNYLHQNNIIHRDLKTANLL-MDENG---VVKVADFGVAR-VQAQSGVMTAETGTYRWM 274
+ YLH ++HRDLK +N+L +DE+G +++ DFG A+ ++A++G++ T ++
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 275 APEV 278
APEV
Sbjct: 188 APEV 191
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 108 DAKQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
D+ + ++ + SG++G L + ++ VA+K ++ ++ + +E+ R +R
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLR 72
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H N+V+F P +L IV E+ + G +++ + G F + G++Y H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 226 QNNIIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L+D + +K+ DFG ++ + GT ++APEV
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 186
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAI+ + P T + +E+ I+ + RH+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 89 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G +T T + APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 111
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 112 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 170
Query: 275 APE 277
+PE
Sbjct: 171 SPE 173
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRK 163
E+ +L++ +A G + +Y+ +E A+K L E + QEV M+K
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKK 81
Query: 164 IR-HKNVVQFIGAC--------TRPPNLCIVTEFMARGSIYDFLHK--QKGVFQLTSLLK 212
+ H N+VQF A T ++TE + +G + +FL K +G ++LK
Sbjct: 82 LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 213 VAIDVSKGMNYLHQNN--IIHRDLKTANLLMDENGVVKVADFGVA 255
+ + + ++H+ IIHRDLK NLL+ G +K+ DFG A
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 33/191 (17%)
Query: 118 VASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF--- 172
+ G++G + K S+ AIK ++ E L EV ++ + H+ VV++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 173 ----------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
+ A + L I E+ ++YD +H + Q ++ + + ++
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR---------------VQAQSGVMTAE 267
Y+H IIHRDLK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 268 TGTYRWMAPEV 278
GT ++A EV
Sbjct: 191 IGTAMYVATEV 201
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 138
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 197
Query: 275 APE 277
+PE
Sbjct: 198 SPE 200
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGAC 176
KV G LY A+KVLK + E I+ + H VV+ A
Sbjct: 49 KVTRPDSGHLY---------AMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAF 99
Query: 177 TRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKT 236
L ++ +F+ G ++ L K+ +F + +++ G+++LH II+RDLK
Sbjct: 100 QTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALGLDHLHSLGIIYRDLKP 158
Query: 237 ANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
N+L+DE G +K+ DFG+++ +A A + GT +MAPEV
Sbjct: 159 ENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEV 201
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 173
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 232
Query: 275 APE 277
+PE
Sbjct: 233 SPE 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 130
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 189
Query: 275 APE 277
+PE
Sbjct: 190 SPE 192
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G ++V DFG A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPP------NLCIVTEF 188
VAIK + P T + +E+ I+ + RH+N++ I R P ++ IV +
Sbjct: 54 RVAIKKISPFEHQTYCQRTL-REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDL 111
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
M +Y L Q + + +G+ Y+H N++HRDLK +NLL++ +K
Sbjct: 112 M-ETDLYKLLKCQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 168
Query: 249 VADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
+ DFG+ARV +G +T T + APE+
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +M E T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 124 GDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLC 183
GDLY ++V ++ EC TE + + + R H + Q P L
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTE-----KRILSLARN--HPFLTQLFCCFQTPDRLF 100
Query: 184 IVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDE 243
V EF+ G + + K + F A ++ + +LH II+RDLK N+L+D
Sbjct: 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDH 159
Query: 244 NGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
G K+ADFG+ + +GV TA GT ++APE+
Sbjct: 160 EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ FG+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTF 282
PE+ +
Sbjct: 191 PEIMLNW 197
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 28/195 (14%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
VWE+ ++L+ V SG+YG + Q+VA+K L + + +E+ ++
Sbjct: 15 VWEV-PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLL 73
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMA-------RGSIYDFLHKQKGVFQLT 208
+ ++H+NV+ + T ++ +VT M + H Q V+QL
Sbjct: 74 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 209 SLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET 268
+G+ Y+H IIHRDLK +N+ ++E+ +++ DFG+AR + MT
Sbjct: 134 ----------RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE--MTGYV 181
Query: 269 GTYRWMAPEVAFTFF 283
T + APE+ +
Sbjct: 182 ATRWYRAPEIMLNWM 196
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +M E T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + +V+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G ++V DFG+A RV+ ++ + GT ++APE+
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXL---CGTPEYLAPEI 209
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPP------NLCIVTEF 188
VAIK + P T + +E+ I+ RH+N++ I R P ++ IV +
Sbjct: 52 RVAIKKISPFEHQTYCQRTL-REIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDL 109
Query: 189 MARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVK 248
M +Y L Q + + +G+ Y+H N++HRDLK +NLL++ +K
Sbjct: 110 M-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLK 166
Query: 249 VADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
+ DFG+ARV +G +T T + APE+
Sbjct: 167 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T +L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL---EEFQDVYI 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L+ ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 67 KDQSCSKRQPALGVPMHSKLLIESSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYG-- 124
+D S P P H+ + ++ N + DV + +I + +G+YG
Sbjct: 12 EDGSAEPPGPVKAEPAHTAASV-AAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVV 70
Query: 125 DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRP----- 179
+ Q+VAIK + K +E+ I++ +H N++ I RP
Sbjct: 71 SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA-IKDILRPTVPYG 129
Query: 180 --PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTA 237
++ +V + M ++ +H + + L + + +G+ Y+H +IHRDLK +
Sbjct: 130 EFKSVYVVLDLM-ESDLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPS 187
Query: 238 NLLMDENGVVKVADFGVARVQAQSGV-----MTAETGTYRWMAPEVAFTF 282
NLL++EN +K+ DFG+AR S MT T + APE+ +
Sbjct: 188 NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I + + + +VV F G + +V E R S+ + LHK++
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+G+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGT 205
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 206 PNYIAPEV 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 118 VASGSYGDLYKGTY---CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV---Q 171
+ G+YG + Y VAIK + P T + +E+ I+ + RH+NV+
Sbjct: 51 IGEGAYG-MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL-REIQILLRFRHENVIGIRD 108
Query: 172 FIGACTRPP--NLCIVTEFMARGSIYDFLHKQKGVFQLTS--LLKVAIDVSKGMNYLHQN 227
+ A T ++ IV + M +Y L Q QL++ + + +G+ Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQ----QLSNDHICYFLYQILRGLKYIHSA 163
Query: 228 NIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
N++HRDLK +NLL++ +K+ DFG+AR+ +G +T T + APE+
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 144
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 145 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ +GS+G L K A+K+L K + V + ++ E I++ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ NL +V E+ G ++ L ++ G F A + YLH ++I+RDL
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 235 KTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
K NL++D+ G +KV DFG A RV+ ++ + GT ++APE+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEI 210
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G+YG+ L + VA+K++ + + + +E+ I + H+NVV+F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLK 235
+ E+ + G ++D + G+ + + + + G+ YLH I HRD+K
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RFFHQLMAGVVYLHGIGITHRDIK 132
Query: 236 TANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGTYRWMAPEV 278
NLL+DE +K++DFG+A R + ++ GT ++APE+
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I + + + +VV F G + +V E R S+ + LHK++
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+G+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGT 205
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 206 PNYIAPEV 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ-EVYIMRKIRHKNVVQFIG 174
+ GSY L + + A++V+K E VN + ++ Q E ++ + + + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 175 ACTRPPN-LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
+C + + L V E++ G + + +Q+ + + + A ++S +NYLH+ II+RD
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERGIIYRD 178
Query: 234 LKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
LK N+L+D G +K+ D+G+ + + G T+ GT ++APE+
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 113 KIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
K+E K+ G+YG +YK + VA+K ++ + + +E+ +++++ H N+V
Sbjct: 10 KVE-KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV 68
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI-DVSKGMNYLHQNNI 229
+ + L +V E + + + F+ L+K + + +G+ + H + +
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMTAETGTYRWMAPEV 278
+HRDLK NLL++ G +K+ADFG+AR E T + APE+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 115 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 171 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 191 PEIMLNWM 198
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 191 PEIMLNWM 198
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 58 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 117
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 118 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 176
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ + GT ++++PE+
Sbjct: 177 FGTAKVLSPESKQARANSFVGTAQYVSPEL 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I + + + +VV F G + +V E R S+ + LHK++
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 129
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+G+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 189
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 190 PNYIAPEV 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 110 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 104 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 159
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 160 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 144
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 145 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 89 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 144
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G + T + APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 118 VASGSYGDLYKGTYCSQ-------EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
+ G+YG CS VAIK + P T + +E+ I+ + RH+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 89
Query: 171 QFIGACTRPP------NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
I R P ++ IV + M +Y L Q + + +G+ Y+
Sbjct: 90 G-INDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH--LSNDHICYFLYQILRGLKYI 145
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVARV----QAQSGVMTAETGTYRWMAPEV 278
H N++HRDLK +NLL++ +K+ DFG+ARV +G + T + APE+
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 118 VASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGA 175
+ G++G + K S+ AIK ++ E L EV ++ + H+ VV++ A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 176 CTRPPN-------------LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
N L I E+ ++YD +H + Q ++ + + ++
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR---------------VQAQSGVMTAE 267
Y+H IIHR+LK N+ +DE+ VK+ DFG+A+ + S +T+
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 268 TGTYRWMAPEV 278
GT ++A EV
Sbjct: 191 IGTAXYVATEV 201
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 111 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +MT T + APEV
Sbjct: 167 KILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Query: 106 EIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI-MR 162
E+ A L+ ++ G+YG + K + Q +A+K ++ VN++ K ++ I MR
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMR 61
Query: 163 KIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ---KGVFQLTSLL-KVAIDVS 218
+ V F GA R ++ I E M + D +KQ KG +L K+A+ +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 219 KGMNYLHQN-NIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
K + +LH ++IHRD+K +N+L++ G VK+ DFG++ + G +MAPE
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPE 179
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 54 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 113
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 114 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ + GT ++++PE+
Sbjct: 173 FGTAKVLSPESKQARANSFVGTAQYVSPEL 202
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 105
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 106 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 161 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLL 211
++ S E+ I + + + +VV F G + +V E R S+ + LHK++
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 212 KVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA-RVQAQSGVMTAETGT 270
+G+ YLH N +IHRDLK NL ++++ VK+ DFG+A +++ GT
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT 205
Query: 271 YRWMAPEV 278
++APEV
Sbjct: 206 PNYIAPEV 213
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 104 VWEIDAKQLKIECKVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIM 161
+WE+ + + V SG+YG + T VA+K L + K +E+ ++
Sbjct: 17 IWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 162 RKIRHKNVVQFIGACTRPPNL------CIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+ ++H+NV+ + T +L +VT M + + + QK L I
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 216 DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMA 275
+G+ Y+H +IIHRDLK +NL ++E+ +K+ D G+AR MT T + A
Sbjct: 135 --LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVATRWYRA 190
Query: 276 PEVAFTFF 283
PE+ +
Sbjct: 191 PEIMLNWM 198
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 107
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 108 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 106
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 107 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 188 FMARG---SIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDEN 244
M I L ++ + L +L G+ +LH IIHRDLK +N+++ +
Sbjct: 110 LMDANLCQVIQMELDHERMSYLLYQMLC-------GIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 245 GVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K+ DFG+AR S +MT T + APEV
Sbjct: 163 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 100
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 101 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI-----RHKNVV 170
+ GS+G ++ + +Q AIK LK + V ++ + + + +++ H +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV---LMDDDVECTMVEKRVLSLAWEHPFLT 82
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQLTSLLKVAIDVSKGMNYLHQNNI 229
NL V E++ G + H Q F L+ A ++ G+ +LH I
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
++RDLK N+L+D++G +K+ADFG+ + T E GT ++APE+
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEI 190
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 107
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 108 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 67 KDQSCSKRQPALGVPMHSKLLIESSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYG-- 124
+D S P P H+ + + N + DV + +I + +G+YG
Sbjct: 13 EDGSAEPPGPVKAEPAHTAASVAAK-NLALLKARSFDVTFDVGDEYEIIETIGNGAYGVV 71
Query: 125 DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRP----- 179
+ Q+VAIK + K +E+ I++ +H N++ I RP
Sbjct: 72 SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIA-IKDILRPTVPYG 130
Query: 180 --PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTA 237
++ +V + M ++ +H + + L + + +G+ Y+H +IHRDLK +
Sbjct: 131 EFKSVYVVLDLM-ESDLHQIIHSSQPL-TLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPS 188
Query: 238 NLLMDENGVVKVADFGVARVQAQSGV-----MTAETGTYRWMAPEVAFTF 282
NLL++EN +K+ DFG+AR S MT T + APE+ +
Sbjct: 189 NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 100
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 101 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+ VAIK L N K +E+ +M+ + HKN++ + T L EF
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL---EEFQDVYL 99
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSK----------GMNYLHQNNIIHRDLKTANLLMDE 243
+ + + L ++++ +D + G+ +LH IIHRDLK +N+++
Sbjct: 100 VMELMDAN-----LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 244 NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ +K+ DFG+AR S +MT T + APEV
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 117 GCLLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ + GT ++++PE+
Sbjct: 176 FGTAKVLSPESKQARANSFVGTAQYVSPEL 205
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTEFM 189
VA+K L N K +E+ +++ + HKN++ + T L +V E M
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 190 ARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
++ +H + +++ LL + G+ +LH IIHRDLK +N+++ + +K+
Sbjct: 110 -DANLCQVIHMELDHERMSYLLYQML---CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 165
Query: 250 ADFGVARVQAQSGVMTAETGTYRWMAPEV 278
DFG+AR + + +MT T + APEV
Sbjct: 166 LDFGLARTASTNFMMTPYVVTRYYRAPEV 194
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 39 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 98
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 99 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 157
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 158 FGTAKVLSPESKQARANXFVGTAQYVSPEL 187
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 32 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 91
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 92 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 150
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 151 FGTAKVLSPESKQARANXFVGTAQYVSPEL 180
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 117 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 115 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 115 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 60 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 119
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 120 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 178
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 179 FGTAKVLSPESKQARANXFVGTAQYVSPEL 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 115 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 173
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 174 FGTAKVLSPESKQARANXFVGTAQYVSPEL 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 33 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 92
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 93 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 151
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 152 FGTAKVLSPESKQARANXFVGTAQYVSPEL 181
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 117 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 117 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 154 FSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKV 213
+E+ I + + H+NVV+F G + E+ + G ++D + G+ + + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-RF 109
Query: 214 AIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVA---RVQAQSGVMTAETGT 270
+ G+ YLH I HRD+K NLL+DE +K++DFG+A R + ++ GT
Sbjct: 110 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 271 YRWMAPEV 278
++APE+
Sbjct: 170 LPYVAPEL 177
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 117 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 175
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 176 FGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 58 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 117
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 118 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 176
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 177 FGTAKVLSPESKQARANXFVGTAQYVSPEL 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 132 CSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMA 190
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 56 TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115
Query: 191 RGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVA 250
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++
Sbjct: 116 NGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT 174
Query: 251 DFGVARV---QAQSGVMTAETGTYRWMAPEV 278
DFG A+V +++ GT ++++PE+
Sbjct: 175 DFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 54 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 113
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 114 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 172
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 173 FGTAKVLSPESKQARANXFVGTAQYVSPEL 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 35 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 94
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 95 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 153
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 154 FGTAKVLSPESKQARANXFVGTAQYVSPEL 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 156 QEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
+EV I+RK+ H N++Q +V + M +G ++D+L +K K+
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 117
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET-GTYRW 273
+ + + LH+ NI+HRDLK N+L+D++ +K+ DFG + Q G E GT +
Sbjct: 118 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSY 176
Query: 274 MAPEV 278
+APE+
Sbjct: 177 LAPEI 181
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ D + K+ G L KV+I
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 114
Query: 216 DVSKGMNYLHQNN-IIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V KG+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + GT +M
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDEMANEFVGTRSYM 173
Query: 275 APE 277
+PE
Sbjct: 174 SPE 176
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 36/149 (24%)
Query: 132 CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF--------------IGACT 177
C + VAIK K + + +K +E+ I+R++ H N+V+ +G+ T
Sbjct: 35 CDKRVAIK--KIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92
Query: 178 RPPNLCIVTEFMA--------RGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNI 229
++ IV E+M +G + + H + ++QL +G+ Y+H N+
Sbjct: 93 ELNSVYIVQEYMETDLANVLEQGPLLEE-HARLFMYQLL----------RGLKYIHSANV 141
Query: 230 IHRDLKTANLLMD-ENGVVKVADFGVARV 257
+HRDLK ANL ++ E+ V+K+ DFG+AR+
Sbjct: 142 LHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 34 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 93
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 94 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 152
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 153 FGTAKVLSPESKQARANXFVGTAQYVSPEL 182
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMAR 191
S+E AIK+L K + + ++E +M ++ H V+ L +
Sbjct: 62 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKN 121
Query: 192 GSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVAD 251
G + ++ K G F T ++ + YLH IIHRDLK N+L++E+ +++ D
Sbjct: 122 GELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITD 180
Query: 252 FGVARV---QAQSGVMTAETGTYRWMAPEV 278
FG A+V +++ GT ++++PE+
Sbjct: 181 FGTAKVLSPESKQARANXFVGTAQYVSPEL 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 160 IMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK 219
++R +H N++ + +VTE G + D + +QK F V ++K
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITK 127
Query: 220 GMNYLHQNNIIHRDLKTANLL-MDENG---VVKVADFGVAR-VQAQSGVMTAETGTYRWM 274
+ YLH ++HRDLK +N+L +DE+G +++ DFG A+ ++A++G++ T ++
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 275 APEV 278
APEV
Sbjct: 188 APEV 191
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 156 QEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI 215
+E+ ++ + +V F GA + I E M GS+ L + K + + L KV+I
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-EILGKVSI 121
Query: 216 DVSKGMNYLHQ-NNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
V +G+ YL + + I+HRD+K +N+L++ G +K+ DFGV+ Q + + GT +M
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYM 180
Query: 275 APE 277
APE
Sbjct: 181 APE 183
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 156 QEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
+EV I+RK+ H N++Q +V + M +G ++D+L +K K+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET-GTYRW 273
+ + + LH+ NI+HRDLK N+L+D++ +K+ DFG + Q G E GT +
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSY 189
Query: 274 MAPEV 278
+APE+
Sbjct: 190 LAPEI 194
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 133 SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARG 192
+QE A K++ + ++ ++ +E I R ++H N+V+ + + +V + + G
Sbjct: 56 TQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 115
Query: 193 SIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD---ENGVVKV 249
+++ + ++ + + + +N++HQ++I+HRDLK NLL+ + VK+
Sbjct: 116 ELFEDIVARE-YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Query: 250 ADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
ADFG+A VQ + GT +++PEV
Sbjct: 175 ADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 156 QEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVA 214
+EV I+RK+ H N++Q +V + M +G ++D+L +K K+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 130
Query: 215 IDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM 274
+ + + LH+ NI+HRDLK N+L+D++ +K+ DFG + + + GT ++
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYL 190
Query: 275 APEV 278
APE+
Sbjct: 191 APEI 194
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 136 VAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTEFM 189
VA+K L N K +E+ +++ + HKN++ + T L +V E M
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 190 ARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKV 249
++ +H + +++ LL + G+ +LH IIHRDLK +N+++ + +K+
Sbjct: 112 D-ANLCQVIHMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 250 ADFGVARVQAQSGVMTAETGTYRWMAPEV 278
DFG+AR + +MT T + APEV
Sbjct: 168 LDFGLARTACTNFMMTPYVVTRYYRAPEV 196
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 40/200 (20%)
Query: 109 AKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ +++ + G+YG + T+ + VAIK ++P L+ +E+ I++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKH 68
Query: 167 KNVVQFIGACTRPPN------LCIVTEFMARGSIYDFL--------HKQKGVFQLTSLLK 212
+N++ I RP + + I+ E M + ++ + H Q ++Q +K
Sbjct: 69 ENIIT-IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGV--------- 263
V LH +N+IHRDLK +NLL++ N +KV DFG+AR+ +S
Sbjct: 127 V----------LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 264 --MTAETGTYRWMAPEVAFT 281
MT T + APEV T
Sbjct: 177 SGMTEXVATRWYRAPEVMLT 196
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI-YDFLHKQKGV 204
++TE LK +E I ++H ++V+ + + L +V EFM + ++ + +
Sbjct: 68 LSTEDLK---REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG 124
Query: 205 FQLTSLLKVAI--DVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQA 259
F + + + + + Y H NNIIHRD+K N+L+ + + VK+ DFGVA
Sbjct: 125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG 184
Query: 260 QSG-VMTAETGTYRWMAPEV 278
+SG V GT +MAPEV
Sbjct: 185 ESGLVAGGRVGTPHFMAPEV 204
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 17/172 (9%)
Query: 118 VASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK------NV 169
+ GS+G + K Q VA+K+++ E ++ ++E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQLTSLLKVAIDVSKGMNYLHQNN 228
+ + T ++C+ E ++ ++Y+ + K K F L + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 229 IIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
IIH DLK N+L+ + G +KV DFG + + Q ++ YR APEV
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEV 270
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 17/172 (9%)
Query: 118 VASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK------NV 169
+ GS+G + K Q VA+K+++ E ++ ++E+ I+ +R + NV
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQLTSLLKVAIDVSKGMNYLHQNN 228
+ + T ++C+ E ++ ++Y+ + K K F L + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 229 IIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
IIH DLK N+L+ + G +KV DFG + + Q ++ YR APEV
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEV 270
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 40/200 (20%)
Query: 109 AKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ +++ + G+YG + T+ + VAIK ++P L+ +E+ I++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKH 68
Query: 167 KNVVQFIGACTRPPNL------CIVTEFMARGSIYDFL--------HKQKGVFQLTSLLK 212
+N++ I RP + I+ E M + ++ + H Q ++Q +K
Sbjct: 69 ENIIT-IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGV--------- 263
V LH +N+IHRDLK +NLL++ N +KV DFG+AR+ +S
Sbjct: 127 V----------LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 264 --MTAETGTYRWMAPEVAFT 281
MT T + APEV T
Sbjct: 177 SGMTEYVATRWYRAPEVMLT 196
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 108 DAKQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
D+ + ++ + SG++G L + ++ VA+K ++ ++ + +E+ R +R
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLR 73
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H N+V+F P +L IV E+ + G +++ + G F + G++Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 226 QNNIIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L+D + +K+ FG ++ + GT ++APEV
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 19/164 (11%)
Query: 133 SQEVAIKVL--KPECVNTEMLKEFSQEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFM 189
SQE A+K++ +P + + + +E V ++ + + H+NV++ I +V E M
Sbjct: 38 SQEYAVKIIEKQPGHIRSRVFRE----VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 190 ARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDE-NGV-- 246
GSI +HK++ +L + + V DV+ +++LH I HRDLK N+L + N V
Sbjct: 94 RGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 247 VKVADFGVARVQAQSG----VMTAE----TGTYRWMAPEVAFTF 282
VK+ DFG+ +G + T E G+ +MAPEV F
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 117 KVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEM-LKEFS--QEVYIMRKIRHKNVVQFI 173
++ SG++G +++ C ++ +V + +NT L +++ E+ IM ++ H ++
Sbjct: 58 ELGSGAFGVVHR---CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 174 GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRD 233
A + ++ EF++ G ++D + + ++ +G+ ++H+++I+H D
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174
Query: 234 LKTANLLMD--ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+K N++ + + VK+ DFG+A ++ T T + APE+
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 118 VASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI-----RHKNVV 170
+ GS+G ++ + +Q AIK LK + V ++ + + + +++ H +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV---LMDDDVECTMVEKRVLSLAWEHPFLT 81
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQLTSLLKVAIDVSKGMNYLHQNNI 229
NL V E++ G + H Q F L+ A ++ G+ +LH I
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
++RDLK N+L+D++G +K+ADFG+ + T GT ++APE+
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 114 IECKVASGSYGDLYKGT--YCSQEVAIK-VLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
I ++ +G++G +++ T A K V+ P + E ++ +E+ M +RH +V
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHPTLV 111
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A + ++ EFM+ G +++ + + ++ V KG+ ++H+NN +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 231 HRDLKTANLLM--DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVA 279
H DLK N++ + +K+ DFG+ + TGT + APEVA
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 114 IECKVASGSYGDLYKGT--YCSQEVAIK-VLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
I ++ +G++G +++ T A K V+ P + E ++ +E+ M +RH +V
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHPTLV 217
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A + ++ EFM+ G +++ + + ++ V KG+ ++H+NN +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 231 HRDLKTANLLM--DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVA 279
H DLK N++ + +K+ DFG+ + TGT + APEVA
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 207 LTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--VQAQSGVM 264
+ L+ + V++GM +L IHRDL N+L+ EN VVK+ DFG+AR + V
Sbjct: 198 MEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 265 TAETG-TYRWMAPEVAF 280
+T +WMAPE F
Sbjct: 258 KGDTRLPLKWMAPESIF 274
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLY-------KGTYCSQEVAIKVLKPEC 145
C +P D + WE ++LK+ + G++G + K + + VA+K+LK
Sbjct: 11 QCERLPYDASK-WEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHK-NVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKG 203
+E K E+ I+ I H NVV +GACT+ L ++ E+ G++ ++L ++
Sbjct: 70 TASE-YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
Query: 204 VFQLT 208
+F L
Sbjct: 129 LFFLN 133
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNL------CIVTE 187
+ VAIK L N K +E+ +M+ + HKN++ + T +L IV E
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 188 FMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVV 247
M ++ + + +++ LL + G+ +LH IIHRDLK +N+++ + +
Sbjct: 112 LMD-ANLCQVIQMELDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 248 KVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K+ DFG+AR S +M T + APEV
Sbjct: 168 KILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 40/200 (20%)
Query: 109 AKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ +++ + G+YG + T+ + VAIK ++P L+ +E+ I++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL-REIKILKHFKH 68
Query: 167 KNVVQFIGACTRPPNL------CIVTEFMARGSIYDFL--------HKQKGVFQLTSLLK 212
+N++ I RP + I+ E M + ++ + H Q ++Q +K
Sbjct: 69 ENIIT-IFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 213 VAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE-TG-- 269
V LH +N+IHRDLK +NLL++ N +KV DFG+AR+ +S +E TG
Sbjct: 127 V----------LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 270 -------TYRWM-APEVAFT 281
RW APEV T
Sbjct: 177 SGMVEFVATRWYRAPEVMLT 196
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
K+ SG++GD++ + E IK + + M ++ E+ +++ + H N+++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM-EQIEAEIEVLKSLDHPNIIKIFE 87
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN---YLHQNNIIH 231
N+ IV E G + + + + + S VA + + MN Y H +++H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 232 RDLKTANLLMDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+DLK N+L + + +K+ DFG+A + T GT +MAPEV
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 8/175 (4%)
Query: 108 DAKQLKIECKVASGSYG--DLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR 165
D+ + ++ + SG++G L + ++ VA+K ++ ++ + +E+ R +R
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLR 73
Query: 166 HKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
H N+V+F P +L IV E+ + G +++ + G F + G++Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 226 QNNIIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ HRDLK N L+D + +K+ FG ++ GT ++APEV
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEV 187
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 117 KVASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIR-HKNVVQFI 173
K+ G+YG ++K + VA+K + N+ + +E+ I+ ++ H+N+V +
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 174 GA--CTRPPNLCIVTEFMA-------RGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYL 224
++ +V ++M R +I + +HKQ V+QL ++K YL
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK----------YL 125
Query: 225 HQNNIIHRDLKTANLLMDENGVVKVADFGVAR 256
H ++HRD+K +N+L++ VKVADFG++R
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH-KNVVQFIGACTRPPNLCIVTEFMARG 192
QE A K LK + E E+ ++ + V+ + ++ E+ A G
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 193 SIYDF-LHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDEN---GVVK 248
I+ L + + ++++ + +G+ YLHQNNI+H DLK N+L+ G +K
Sbjct: 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIK 174
Query: 249 VADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+ DFG++R + + GT ++APE+
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEI 204
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 17/172 (9%)
Query: 118 VASGSYGDLYKG--TYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHK------NV 169
+ G +G + K Q VA+K+++ E ++ ++E+ I+ +R + NV
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYDFLHKQK-GVFQLTSLLKVAIDVSKGMNYLHQNN 228
+ + T ++C+ E ++ ++Y+ + K K F L + K A + + ++ LH+N
Sbjct: 162 IHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 229 IIHRDLKTANLLMDENGV--VKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
IIH DLK N+L+ + G +KV DFG + + Q ++ YR APEV
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR--APEV 270
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 118 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 175 NIFGTPEFVAPEI 187
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 118 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 175 NIFGTPEFVAPEI 187
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPEFVAPEI 188
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 19/164 (11%)
Query: 133 SQEVAIKVL--KPECVNTEMLKEFSQEVYIMRKIR-HKNVVQFIGACTRPPNLCIVTEFM 189
SQE A+K++ +P + + + +E V ++ + + H+NV++ I +V E M
Sbjct: 38 SQEYAVKIIEKQPGHIRSRVFRE----VEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 190 ARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDE-NGV-- 246
GSI +HK++ +L + + V DV+ +++LH I HRDLK N+L + N V
Sbjct: 94 RGGSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 247 VKVADF----GVARVQAQSGVMTAE----TGTYRWMAPEVAFTF 282
VK+ DF G+ S + T E G+ +MAPEV F
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 109 AKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ ++ K+ SGS+GD+Y GT +EVAIK+ ECV T+ + E I + ++
Sbjct: 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKH-PQLHIESKIYKMMQG 63
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
+ I C + ++ + S+ D + F L ++L +A + + Y+H
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVAR 256
N IHRD+K N LM + +V + DFG+A+
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 109 AKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ ++ K+ SGS+GD+Y GT +EVAIK+ ECV T+ + E I + ++
Sbjct: 6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKH-PQLHIESKIYKMMQG 61
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
+ I C + ++ + S+ D + F L ++L +A + + Y+H
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVAR 256
N IHRD+K N LM + +V + DFG+A+
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
QE A K++ + ++ ++ +E I R ++H N+V+ + + +V + + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVA 250
+++ + ++ + + + +N+ H N I+HRDLK NLL+ + VK+A
Sbjct: 90 LFEDIVARE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 251 DFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
DFG+A VQ GT +++PEV
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 152 KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF--QLTS 209
++ +EV I+++I+H NV+ ++ ++ E +A G ++DFL +++ + + T
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 210 LLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGV----VKVADFGVARVQAQSGVMT 265
LK ++ G+ YLH I H DLK N+++ + V +K+ DFG+A
Sbjct: 119 FLKQILN---GVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 266 AETGTYRWMAPEV 278
GT ++APE+
Sbjct: 176 NIFGTPAFVAPEI 188
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
QE A K++ + ++ ++ +E I R ++H N+V+ + + +V + + G
Sbjct: 30 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 89
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVA 250
+++ + ++ + + + +N+ H N I+HRDLK NLL+ + VK+A
Sbjct: 90 LFEDIVARE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 251 DFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
DFG+A VQ GT +++PEV
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
++K+ C + +G + VAIK++ + ++ L E+ ++ +RH+++
Sbjct: 25 KVKLACHILTG------------EMVAIKIMDKNTLGSD-LPRIKTEIEALKNLRHQHIC 71
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
Q + +V E+ G ++D++ Q + + + + V + + Y+H
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA 130
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
HRDLK NLL DE +K+ DFG+ + +T G+ + APE+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 45/186 (24%)
Query: 118 VASGSYGDL-YKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI-RHKNVVQFIGA 175
+ G+ G + Y+G + +++VA+K + PEC + +EV ++R+ H NV+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA-----DREVQLLRESDEHPNVIRYF-- 84
Query: 176 CTRPPN--------LCIVT--EFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLH 225
CT LC T E++ + DF H G+ +T L + + G+ +LH
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQK---DFAHL--GLEPITLLQQT----TSGLAHLH 135
Query: 226 QNNIIHRDLKTANLLM---DENGVVK--VADFGVARVQA--------QSGVMTAETGTYR 272
NI+HRDLK N+L+ + +G +K ++DFG+ + A +SGV GT
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV----PGTEG 191
Query: 273 WMAPEV 278
W+APE+
Sbjct: 192 WIAPEM 197
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 118 VASGSYGDLYKGTYCSQ-EVAIK-----VLKPECVN----TEMLKEFSQEVYIMRKIRHK 167
++SGSYG + G VAIK V VN + + K +E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 168 NVVQF--IGACTRPP---NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
N++ I P L +VTE M R + +H Q+ V + + G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM-APEVAFT 281
LH+ ++HRDL N+L+ +N + + DF +AR T T+RW APE+
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV-THRWYRAPELVMQ 207
Query: 282 F 282
F
Sbjct: 208 F 208
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 21/159 (13%)
Query: 116 CKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQ---- 171
CKV G+YG +YK + + T + +E+ ++R+++H NV+
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 172 FIGACTRP---------PNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
F+ R +L + +F R S + Q + SLL +D G++
Sbjct: 87 FLSHADRKVWLLFDYAEHDLWHIIKF-HRASKANKKPVQLPRGMVKSLLYQILD---GIH 142
Query: 223 YLHQNNIIHRDLKTANLLM----DENGVVKVADFGVARV 257
YLH N ++HRDLK AN+L+ E G VK+AD G AR+
Sbjct: 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 18/181 (9%)
Query: 118 VASGSYGDLYKGTYCSQ-EVAIK-----VLKPECVN----TEMLKEFSQEVYIMRKIRHK 167
++SGSYG + G VAIK V VN + + K +E+ ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 168 NVVQF--IGACTRPP---NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMN 222
N++ I P L +VTE M R + +H Q+ V + + G++
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 223 YLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWM-APEVAFT 281
LH+ ++HRDL N+L+ +N + + DF +AR T T+RW APE+
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYV-THRWYRAPELVMQ 207
Query: 282 F 282
F
Sbjct: 208 F 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 118 VASGSYGD----LYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
+ GSYG L T C + V I K +E+ ++R++RHKNV+Q +
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 174 GAC--TRPPNLCIVTEFMARG--SIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNI 229
+ +V E+ G + D + +++ F + + G+ YLH I
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--FPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARVQ---AQSGVMTAETGTYRWMAPEVA 279
+H+D+K NLL+ G +K++ GVA A G+ + PE+A
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA 183
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPN--LCIVTEFMARGSIYDFLHK---QKGVFQLTSLL 211
EV ++R+++H N+V++ N L IV E+ G + + K ++ +L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 212 KVAIDVSKGMNYLHQ-----NNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMT 265
+V ++ + H+ + ++HRDLK AN+ +D VK+ DFG+AR+ +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 266 AETGTYRWMAPE 277
A GT +M+PE
Sbjct: 175 AFVGTPYYMSPE 186
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 182 LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
L V E++ G + + +Q G F+ + A +++ G+ +L II+RDLK N+++
Sbjct: 417 LYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475
Query: 242 DENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
D G +K+ADFG+ + GV T GT ++APE+
Sbjct: 476 DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 116 CKV-ASGSYGDLYKGTYC-SQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFI 173
CKV +GS+G +++ S EVAIK + + + K ++E+ IMR ++H NVV
Sbjct: 45 CKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFK--NRELQIMRIVKHPNVVDLK 98
Query: 174 ------GACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAI---DVSKGMNYL 224
G L +V E++ ++Y + Q +L + + + + + Y+
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 225 HQNNIIHRDLKTANLLMD-ENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVAF 280
H I HRD+K NLL+D +GV+K+ DFG A++ + + + APE+ F
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 182 LCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM 241
L V E++ G + + +Q G F+ + A +++ G+ +L II+RDLK N+++
Sbjct: 96 LYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154
Query: 242 DENGVVKVADFGVARVQAQSGVMTAE-TGTYRWMAPEV 278
D G +K+ADFG+ + GV T GT ++APE+
Sbjct: 155 DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 202 KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--VQA 259
K L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG+AR +
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 260 QSGVMTAETG-TYRWMAPEVAF 280
V + +WMAPE F
Sbjct: 252 PDYVRKGDARLPLKWMAPETIF 273
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 11 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 69
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 205 F 205
F
Sbjct: 130 F 130
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 202 KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--VQA 259
K L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG+AR +
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 260 QSGVMTAETG-TYRWMAPEVAF 280
V + +WMAPE F
Sbjct: 247 PDYVRKGDARLPLKWMAPETIF 268
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 6 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 64
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 65 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 124
Query: 205 F 205
F
Sbjct: 125 F 125
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 202 KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--VQA 259
K L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG+AR +
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 260 QSGVMTAETG-TYRWMAPEVAF 280
V + +WMAPE F
Sbjct: 245 PDYVRKGDARLPLKWMAPETIF 266
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 4 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 62
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 63 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 122
Query: 205 F 205
F
Sbjct: 123 F 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 202 KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVAR--VQA 259
K L L+ + V+KGM +L IHRDL N+L+ E VVK+ DFG+AR +
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 260 QSGVMTAETG-TYRWMAPEVAF 280
V + +WMAPE F
Sbjct: 254 PDYVRKGDARLPLKWMAPETIF 275
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 93 NCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKG-------TYCSQEVAIKVLKPEC 145
+C +P D + WE +LK+ + G++G + + T + VA+K+LK
Sbjct: 13 HCERLPYDASK-WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 71
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPN-LCIVTEFMARGSIYDFLHKQKGV 204
++E S+ ++ H NVV +GACT+P L ++ EF G++ +L ++
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 205 F 205
F
Sbjct: 132 F 132
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G+ L + + A+K+L K E + F +E IM VVQ
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHK----QKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A L +V E+M G + + + +K T+ + +A+D +H +I
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHSMGLI 196
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
HRD+K N+L+D++G +K+ADFG ++G++ +T GT +++PEV
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
E A K++ + ++ ++ +E I RK++H N+V+ + +V + + G +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVAD 251
++ + ++ + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 93 FEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+A S GT +++PEV
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEV 178
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPN--LCIVTEFMARGSIYDFLHK---QKGVFQLTSLL 211
EV ++R+++H N+V++ N L IV E+ G + + K ++ +L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 212 KVAIDVSKGMNYLHQ-----NNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTA 266
+V ++ + H+ + ++HRDLK AN+ +D VK+ DFG+AR+
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 267 E-TGTYRWMAPE 277
E GT +M+PE
Sbjct: 175 EFVGTPYYMSPE 186
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
E A K++ + ++ ++ +E I RK++H N+V+ + +V + + G +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVAD 251
++ + ++ + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 93 FEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+A S GT +++PEV
Sbjct: 152 FGLAIEVNDSEAWHGFAGTPGYLSPEV 178
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
E A K++ + ++ ++ +E I RK++H N+V+ + +V + + G +
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVAD 251
++ + ++ + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 92 FEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 150
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+A S GT +++PEV
Sbjct: 151 FGLAIEVNDSEAWHGFAGTPGYLSPEV 177
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 135 EVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI 194
E A K++ + ++ ++ +E I RK++H N+V+ + +V + + G +
Sbjct: 56 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 195 YDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVAD 251
++ + ++ + + + + Y H N I+HR+LK NLL+ + VK+AD
Sbjct: 116 FEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 252 FGVARVQAQSGVMTAETGTYRWMAPEV 278
FG+A S GT +++PEV
Sbjct: 175 FGLAIEVNDSEAWHGFAGTPGYLSPEV 201
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G+ L + + A+K+L K E + F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHK----QKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A L +V E+M G + + + +K T+ + +A+D +H I
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------IHSMGFI 195
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
HRD+K N+L+D++G +K+ADFG + G++ +T GT +++PEV
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 157 EVYIMRKIRHKNVVQFIGACTRPPN--LCIVTEFMARGSIYDFLHK---QKGVFQLTSLL 211
EV ++R+++H N+V++ N L IV E+ G + + K ++ +L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 212 KVAIDVSKGMNYLHQ-----NNIIHRDLKTANLLMDENGVVKVADFGVARV-QAQSGVMT 265
+V ++ + H+ + ++HRDLK AN+ +D VK+ DFG+AR+ +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 266 AETGTYRWMAPE 277
GT +M+PE
Sbjct: 175 TFVGTPYYMSPE 186
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 105 WEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQEVYI-M 161
+E+ A L+ ++ G+YG + K + Q A+K ++ VN++ K ++ I
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQKRLLXDLDISX 87
Query: 162 RKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ---KGVFQLTSLL-KVAIDV 217
R + V F GA R ++ I E + D +KQ KG +L K+A+ +
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELX--DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 218 SKGMNYLHQN-NIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAP 276
K + +LH ++IHRD+K +N+L++ G VK DFG++ + G + AP
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAP 205
Query: 277 E 277
E
Sbjct: 206 E 206
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G+ L + + A+K+L K E + F +E IM VVQ
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHK----QKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A L +V E+M G + + + +K T+ + +A+D +H I
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------IHSMGFI 195
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
HRD+K N+L+D++G +K+ADFG + G++ +T GT +++PEV
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 118 VASGSYGD--LYKGTYCSQEVAIKVL-KPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+ G++G+ L + + A+K+L K E + F +E IM VVQ
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHK----QKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
A L +V E+M G + + + +K T+ + +A+D +H I
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA------IHSMGFI 190
Query: 231 HRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAET--GTYRWMAPEV 278
HRD+K N+L+D++G +K+ADFG + G++ +T GT +++PEV
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 109 AKQLKIECKVASGSYGDLYKGTYCS--QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRH 166
+ ++ K+ SGS+GD+Y G + +EVAIK+ ECV T+ + E + ++
Sbjct: 8 GNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL---ECVKTKH-PQLHIESKFYKMMQG 63
Query: 167 KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQ 226
+ I C + ++ + S+ D + F L ++L +A + + Y+H
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123
Query: 227 NNIIHRDLKTANLLM---DENGVVKVADFGVAR 256
N IHRD+K N LM + +V + DFG+A+
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI-YDFLHKQKGV 204
++TE LK +E I ++H ++V+ + + L +V EFM + ++ + +
Sbjct: 70 LSTEDLK---REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG 126
Query: 205 FQLTSLLKVAI--DVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQA 259
F + + + + + Y H NNIIHRD+K +L+ + + VK+ FGVA
Sbjct: 127 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
Query: 260 QSG-VMTAETGTYRWMAPEV 278
+SG V GT +MAPEV
Sbjct: 187 ESGLVAGGRVGTPHFMAPEV 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 146 VNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSI-YDFLHKQKGV 204
++TE LK +E I ++H ++V+ + + L +V EFM + ++ + +
Sbjct: 68 LSTEDLK---REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG 124
Query: 205 FQLTSLLKVAI--DVSKGMNYLHQNNIIHRDLKTANLLM---DENGVVKVADFGVARVQA 259
F + + + + + Y H NNIIHRD+K +L+ + + VK+ FGVA
Sbjct: 125 FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 184
Query: 260 QSG-VMTAETGTYRWMAPEV 278
+SG V GT +MAPEV
Sbjct: 185 ESGLVAGGRVGTPHFMAPEV 204
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 25/119 (21%)
Query: 181 NLCIVTEFMARGSIYDFLHKQKGV--FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTAN 238
++CIV E + S YDF+ K+ G F+L + K+A + K +N+LH N + H DLK N
Sbjct: 91 HICIVFELLGL-STYDFI-KENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN 148
Query: 239 LLM---------------DE----NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+L DE N +KV DFG A + T YR APEV
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYR--APEV 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
Query: 99 TDGTDVWEIDAKQLKIECKVASGSYGDLYKGTY--CSQEVAIKVLKPECVNTEMLKEFSQ 156
T G ++ + L+ ++ SG+ G ++K + +A+K ++ N E K
Sbjct: 14 TIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRILM 72
Query: 157 EVYIMRKIRH-KNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVA 214
++ ++ K +VQ G ++ I E M G+ + L K+ +G L K+
Sbjct: 73 DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMT 130
Query: 215 IDVSKGMNYL-HQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRW 273
+ + K + YL ++ +IHRD+K +N+L+DE G +K+ DFG++ G +
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAY 190
Query: 274 MAPE 277
MAPE
Sbjct: 191 MAPE 194
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 121 GSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPP 180
G YG L++ EV +KVL N + F + +M K+ HK++V G C
Sbjct: 33 GDYGQLHE-----TEVLLKVLDKAHRNYS--ESFFEAASMMSKLSHKHLVLNYGVCVCGD 85
Query: 181 NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
+V EF+ GS+ +L K K + L+VA ++ M++L +N +IH ++ N+L
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNIL 145
Query: 241 M--------DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ +K++D G++ ++ W+ PE
Sbjct: 146 LIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---WVPPE 187
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 118 VASGSYGDLYKGTYCSQE--VAIKVLKPECVNTEMLK-EFSQEVYIMRKIRHKNVVQFIG 174
+ G +G++Y VA+KVL + E ++ + +E+ I + H N+++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
+ ++ E+ RG +Y L K F + +++ + Y H +IHRD+
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 235 KTANLLMDENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
K NLL+ G +K+ADFG + V A S GT ++ PE+
Sbjct: 150 KPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEM 192
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSXICSRYYR--APELIF 195
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 182 LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L I+ E M G ++ + ++ F ++ D+ + +LH +NI HRD+K NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 241 M---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++ V+K+ DFG A+ Q+ + T Y ++APEV
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEV 181
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
QE A K++ + ++ ++ +E I R ++H N+V+ + + + ++ + + G
Sbjct: 48 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 107
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMD---ENGVVKVA 250
+++ + ++ + + + + + HQ ++HRDLK NLL+ + VK+A
Sbjct: 108 LFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 251 DFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
DFG+A V+ + GT +++PEV
Sbjct: 167 DFGLAIEVEGEQQAWFGFAGTPGYLSPEV 195
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 182 LCIVTEFMARGSIYDFLHKQ-KGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L I+ E M G ++ + ++ F ++ D+ + +LH +NI HRD+K NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 241 M---DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+++ V+K+ DFG A+ Q+ + T Y ++APEV
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAPEV 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 107 IDAKQLKIECKVASG--SYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKI 164
ID K K+ G SY DL +G + A+K + C + +E +E + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMHRLF 83
Query: 165 RHKNVVQFIGACTRPPNL----CIVTEFMARGSIYDFLH--KQKGVFQLT--SLLKVAID 216
H N+++ + C R ++ F RG++++ + K KG F LT +L + +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLG 142
Query: 217 VSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
+ +G+ +H HRDLK N+L+ + G + D G
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSXICSRYYR--APELIF 195
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 8 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 60
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 61 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 117
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 118 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 177
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 178 EPNVSXICSRYYR--APELIF 196
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 11 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 63
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 64 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 120
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 121 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 180
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 181 EPNVSXICSRYYR--APELIF 199
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 86 LLIESSPNCIEIPTDGTDVWEID-AKQLKIECKVASGSYGDLYKGT--YCSQEVAIKVLK 142
+ +E P +E+ +G E + +++ + SG++G ++ ++EV +K +K
Sbjct: 1 MALEEPPKAVEL--EGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK 58
Query: 143 PECV------NTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARG-SIY 195
E V L + + E+ I+ ++ H N+++ + +V E G ++
Sbjct: 59 KEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLF 118
Query: 196 DFLHKQKGVFQLTSLLKVAI--DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFG 253
F+ + +L L I + + YL +IIHRD+K N+++ E+ +K+ DFG
Sbjct: 119 AFIDRHP---RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG 175
Query: 254 VARVQAQSGVMTAETGTYRWMAPEV 278
A + + GT + APEV
Sbjct: 176 SAAYLERGKLFYTFCGTIEYCAPEV 200
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSXICSRYYR--APELIF 195
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 127 YKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVT 186
YK T + V ++ + E + EM+ E+++ + H N+V + L +VT
Sbjct: 32 YKPT--GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 89
Query: 187 EFMARGSIYDFL--HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDEN 244
FMA GS D + H G+ +L ++ + V K ++Y+H +HR +K +++L+ +
Sbjct: 90 SFMAYGSAKDLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 148
Query: 245 GVVKVADFG-----VARVQAQSGVMTAETGTYR---WMAPEV 278
G V ++ ++ Q Q V + + W++PEV
Sbjct: 149 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 19 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 71
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 72 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 128
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 189 EPNVSXICSRYYR--APELIF 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 26 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 78
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 79 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 135
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 136 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 195
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 196 EPNVSXICSRYYR--APELIF 214
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 15 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 67
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 68 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 124
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 125 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 184
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 185 EPNVSXICSRYYR--APELIF 203
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 127 YKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVT 186
YK T + V ++ + E + EM+ E+++ + H N+V + L +VT
Sbjct: 48 YKPT--GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105
Query: 187 EFMARGSIYDFL--HKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDEN 244
FMA GS D + H G+ +L ++ + V K ++Y+H +HR +K +++L+ +
Sbjct: 106 SFMAYGSAKDLICTHFMDGMNEL-AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 164
Query: 245 GVVKVADFG-----VARVQAQSGVMTAETGTYR---WMAPEV 278
G V ++ ++ Q Q V + + W++PEV
Sbjct: 165 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 19 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 71
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 72 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 128
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 189 EPNVSXICSRYYR--APELIF 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQ---FIGACTRPPN---LCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ F + + L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSXICSRYYR--APELIF 195
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSYICSRYYR--APELIF 195
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 41 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 93
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 94 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 150
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 151 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 211 EPNVSXICSRYYR--APELIF 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSYICSRYYR--APELIF 195
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 20 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 72
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 73 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 129
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 130 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 190 EPNVSYICSRYYR--APELIF 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAF 59
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 60 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 177 EPNVSYICSRYYR--APELIF 195
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 121 GSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPP 180
G YG L++ EV +KVL N + F + +M K+ HK++V G C
Sbjct: 33 GDYGQLHE-----TEVLLKVLDKAHRNYS--ESFFEAASMMSKLSHKHLVLNYGVCFCGD 85
Query: 181 NLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
+V EF+ GS+ +L K K + L+VA ++ M++L +N +IH ++ N+L
Sbjct: 86 ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNIL 145
Query: 241 M--------DENGVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ +K++D G++ ++ W+ PE
Sbjct: 146 LIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP---WVPPE 187
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 12 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 64
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 65 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 121
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 122 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 181
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 182 EPNVSYICSRYYR--APELIF 200
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 112 LKIECKVASGSYGDLY--KGTYCSQEVAIKV--LKPECVNTEMLKEFSQEVYIMRKIRHK 167
++ K+ G++G+L K Y ++ VAIK+ +K + F +++ I
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ- 69
Query: 168 NVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN 227
V + G C + +V E + S+ D F L ++L +AI + M Y+H
Sbjct: 70 --VYYFGPCGK--YNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 228 NIIHRDLKTANLLMDENG-----VVKVADFGVAR----VQAQSGVMTAE----TGTYRWM 274
N+I+RD+K N L+ G V+ + DFG+A+ + + + E TGT R+M
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 275 A 275
+
Sbjct: 185 S 185
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 41 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 93
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 94 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 150
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 151 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 211 EPNVSYICSRYYR--APELIF 229
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 43 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 95
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 96 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 152
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 153 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 212
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 213 EPNVSYICSRYYR--APELIF 231
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 45 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 97
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 98 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 154
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 155 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 214
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 215 EPNVSYICSRYYR--APELIF 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 86 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 138
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 139 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 195
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 196 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 255
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 256 EPNVSYICSRYYR--APELIF 274
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 95 IEIPTDGTD-VWEIDAKQLKIECKVASGSYGDLYKGTYC--SQEVAIKVLKPECVNTEML 151
+ P G D E+ K+ + +GS+G +Y+ C + VAIK + + +
Sbjct: 35 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRF 87
Query: 152 KEFSQEVYIMRKIRHKNVVQF------IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVF 205
K ++E+ IMRK+ H N+V+ G L +V +++ ++Y
Sbjct: 88 K--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 144
Query: 206 QLTSLLKVAI---DVSKGMNYLHQNNIIHRDLKTANLLMD-ENGVVKVADFGVAR--VQA 259
Q ++ V + + + + Y+H I HRD+K NLL+D + V+K+ DFG A+ V+
Sbjct: 145 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 204
Query: 260 QSGVMTAETGTYRWMAPEVAF 280
+ V + YR APE+ F
Sbjct: 205 EPNVSYICSRYYR--APELIF 223
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E M ++DF+ ++G Q V + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 127
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 183
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 25/119 (21%)
Query: 181 NLCIVTEFMARGSIYDFLHKQKGV--FQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTAN 238
++CIV E + S YDF+ K+ G F+L + K+A + K +N+LH N + H DLK N
Sbjct: 91 HICIVFELLGL-STYDFI-KENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN 148
Query: 239 LLM---------------DE----NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
+L DE N +KV DFG A + YR APEV
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYR--APEV 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 123 YGDLYKGTY---------CS-QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQF 172
Y D+ KG + C+ E A K++ + ++ ++ +E I R ++H N+V+
Sbjct: 9 YEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 173 IGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHR 232
+ + +V + + G +++ + ++ + + + + + HQ ++HR
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 233 DLKTANLLMD---ENGVVKVADFGVA-RVQAQSGVMTAETGTYRWMAPEV 278
DLK NLL+ + VK+ADFG+A VQ GT +++PEV
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 61/228 (26%)
Query: 110 KQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKP------ECVNTEMLKEFSQEVYIMRK 163
K+ ++ + GSYG + + +Q AI+ +K +N + ++ EV +M+K
Sbjct: 26 KKYHLKGAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84
Query: 164 IRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSK---- 219
+ H N+ + +C+V E G + D L+ VF S K A+DV K
Sbjct: 85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN----VFIDDSTGKCAMDVVKTQIC 140
Query: 220 ---------------------------------------GMNYLHQNNIIHRDLKTANLL 240
++YLH I HRD+K N L
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200
Query: 241 MDENGV--VKVADFGVAR--VQAQSGV---MTAETGTYRWMAPEVAFT 281
N +K+ DFG+++ + +G MT + GT ++APEV T
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 134 QEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGS 193
+E A+K+++ + ++ + F + + + +KN+++ I +V E + GS
Sbjct: 39 KEYAVKIIEKQAGHSRS-RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 194 IYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDEN---GVVKVA 250
I + KQK F +V DV+ +++LH I HRDLK N+L + VK+
Sbjct: 98 ILAHIQKQKH-FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKIC 156
Query: 251 DF----GVARVQAQSGVMTAE----TGTYRWMAPEVAFTF 282
DF G+ + + + T E G+ +MAPEV F
Sbjct: 157 DFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 9/174 (5%)
Query: 90 SSPNCIEIPTDGTDVWEIDAKQLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTE 149
SS +P +D W+I + +I + +GSYG + + ++ + + K V +
Sbjct: 35 SSKPTASMPRPHSD-WQI-PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFED 92
Query: 150 ML--KEFSQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQ--KGVF 205
++ K +E+ I+ ++ H +VV+ + P ++ E I D K+ +
Sbjct: 93 LIDCKRILREIAILNRLNHDHVVKVLDIVI-PKDVEKFDELYVVLEIADSDFKKLFRTPV 151
Query: 206 QLTSL-LKVAI-DVSKGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARV 257
LT L +K + ++ G+ Y+H I+HRDLK AN L++++ VKV DFG+AR
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 118 VASGSYGDLY-----KGTYCSQEVAIKVLKPECV--NTEMLKEFSQEVYIMRKIRHKN-V 169
+ +G+YG ++ G + A+KVLK + + + E ++ IR +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 170 VQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNI 229
V A L ++ +++ G ++ L Q+ F + ++ + +LH+ I
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 230 IHRDLKTANLLMDENGVVKVADFGVAR--VQAQSGVMTAETGTYRWMAPEV 278
I+RD+K N+L+D NG V + DFG+++ V ++ GT +MAP++
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 118 VASGSYGDLYKGTYCSQEVAIKVLKPECVNTEML--KEFSQEVYIMRKIRHKNVVQFIGA 175
+ GSYG +Y + E + + K + +++ K +E+ I+ +++ +++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 176 CTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLK------VAIDVSKGMNYLHQNNI 229
P +L E I D K +F+ L + ++ G N++H++ I
Sbjct: 94 II-PDDLLKFDELYIVLEIAD--SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 230 IHRDLKTANLLMDENGVVKVADFGVARV 257
IHRDLK AN L++++ VKV DFG+AR
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLART 178
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+V GS+G+++ K + A+K ++ E E E+ + +V G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYG 133
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A P + I E + GS+ + KQ G L +G+ YLH I+H D+
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 235 KTANLLMDENGV-VKVADFGVARVQAQSG----VMTAE--TGTYRWMAPEV 278
K N+L+ +G + DFG A G ++T + GT MAPEV
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
+V GS+G+++ K + A+K ++ E E E+ + +V G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYG 117
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A P + I E + GS+ + KQ G L +G+ YLH I+H D+
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 235 KTANLLMDENGV-VKVADFGVARVQAQSG----VMTAE--TGTYRWMAPEV 278
K N+L+ +G + DFG A G ++T + GT MAPEV
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 112 LKIECKVASGSYGDLY--KGTYCSQEVAIKV--LKPECVNTEMLKEFSQEVYIMRKIRHK 167
++ K+ G++G+L K Y ++ VAIK+ +K + F +++ I
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ- 69
Query: 168 NVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN 227
V + G C + +V E + S+ D F L ++L +AI + M Y+H
Sbjct: 70 --VYYFGPCGK--YNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 228 NIIHRDLKTANLLMDENG-----VVKVADFGVAR----VQAQSGVMTAE----TGTYRWM 274
N+I+RD+K N L+ G V+ + DF +A+ + + + E TGT R+M
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 184
Query: 275 A 275
+
Sbjct: 185 S 185
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 153
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 154 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 155
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 156 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 112 LKIECKVASGSYGDLY--KGTYCSQEVAIKV--LKPECVNTEMLKEFSQEVYIMRKIRHK 167
++ K+ G++G+L K Y ++ VAIK+ +K + F +++ I
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ- 90
Query: 168 NVVQFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQN 227
V + G C + +V E + S+ D F L ++L +AI + M Y+H
Sbjct: 91 --VYYFGPCGK--YNAMVLELLG-PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 145
Query: 228 NIIHRDLKTANLLMDENG-----VVKVADFGVAR----VQAQSGVMTAE----TGTYRWM 274
N+I+RD+K N L+ G V+ + DF +A+ + + + E TGT R+M
Sbjct: 146 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM 205
Query: 275 A 275
+
Sbjct: 206 S 206
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 148
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 149 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 154
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 155 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 195
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 118 VASGSYGDL--YKGTYCSQEVAIKVLKPECVNTEMLKE-----FSQEVYIMRKIRHKNVV 170
+ G++G++ K + A+K+L EMLK F +E ++ K +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILN----KWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHK-------QKGVFQLTSLLKVAIDVSKGMNY 223
A NL +V ++ G + L K + F L ++ +AID
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV-IAIDS------ 190
Query: 224 LHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQSGVMTAE--TGTYRWMAPEV 278
+HQ + +HRD+K N+LMD NG +++ADFG + G + + GT +++PE+
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 123
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL-LKDTVYTDFDGTRVYSPPE 179
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 199
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 200 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 240
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 163
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 164 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 150 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 17/171 (9%)
Query: 117 KVASGSYGDLY--KGTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVVQFIG 174
++ GS+G+++ K + A+K ++ E E E+ + +V G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYG 131
Query: 175 ACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDL 234
A P + I E + GS+ + KQ G L +G+ YLH I+H D+
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 235 KTANLLMDENGV-VKVADFGVARVQAQSG----VMTAE--TGTYRWMAPEV 278
K N+L+ +G + DFG A G ++T + GT MAPEV
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 182 LCIVTEFMARGSIYDFLH-KQKGVFQLTSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLL 240
L IV E + G ++ + + F ++ + + + YLH NI HRD+K NLL
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 147
Query: 241 MDE---NGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEV 278
N ++K+ DFG A+ +T T ++APEV
Sbjct: 148 YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV 188
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 114 IECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKE-FSQEVYIMRKIRHKNVVQF 172
I+C + G +G +++ + + + N E+ +E +EV + K+ H +V++
Sbjct: 10 IQC-LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 173 IGACT--------RPPN----LCIVTEFMARGSIYDFLHKQKGV--FQLTSLLKVAIDVS 218
A +P + L I + + ++ D+++ + + + + L + + ++
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 219 KGMNYLHQNNIIHRDLKTANLLMDENGVVKVADFGVARVQAQS-------------GVMT 265
+ + +LH ++HRDLK +N+ + VVKV DFG+ Q T
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 266 AETGTYRWMAPE 277
+ GT +M+PE
Sbjct: 189 GQVGTKLYMSPE 200
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 123
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 179
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 150
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 128
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 184
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 143
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 199
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 126
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 182
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 128
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 184
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 123
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 179
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 117 KVASGSYGDLYK------GTYCSQEVAIKVLKPECVNTEMLKEFSQEVYIMRKIRHKNVV 170
++ GS+G++++ G C A+K ++ E E E+ + +V
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQC----AVKKVRLEVFRAE-------ELMACAGLTSPRIV 148
Query: 171 QFIGACTRPPNLCIVTEFMARGSIYDFLHKQKGVFQLTSLLKVAIDVSKGMNYLHQNNII 230
GA P + I E + GS+ + K++G L +G+ YLH I+
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 231 HRDLKTANLLMDENGV-VKVADFGVARVQAQSG----VMTAE--TGTYRWMAPEVAF 280
H D+K N+L+ +G + DFG A G ++T + GT MAPEV
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 111 QLKIECKVASGSYGDLYKGTYCSQEVAIKVLKPECVNTEMLKEFSQ------EVYIMRKI 164
Q ++ + SG +G +Y G S + + + E E EV +++K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 165 RH--KNVVQFIGACTRPPNLCIVTEFMAR-GSIYDFLHKQKGVFQLTSLLKVAIDVSKGM 221
V++ + RP + ++ E ++DF+ ++G Q V + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAV 143
Query: 222 NYLHQNNIIHRDLKTANLLMDEN-GVVKVADFGVARVQAQSGVMTAETGTYRWMAPE 277
+ H ++HRD+K N+L+D N G +K+ DFG + + V T GT + PE
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,190,174
Number of Sequences: 62578
Number of extensions: 328162
Number of successful extensions: 2975
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 800
Number of HSP's gapped (non-prelim): 1185
length of query: 284
length of database: 14,973,337
effective HSP length: 98
effective length of query: 186
effective length of database: 8,840,693
effective search space: 1644368898
effective search space used: 1644368898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)