Query 023288
Match_columns 284
No_of_seqs 409 out of 2144
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:19:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xtp_A LMAJ004091AAA; SGPP, st 99.9 6.3E-26 2.2E-30 194.9 13.5 190 66-273 12-201 (254)
2 2ex4_A Adrenal gland protein A 99.9 1E-23 3.6E-28 180.2 10.1 164 102-274 27-190 (241)
3 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.6E-21 5.6E-26 169.0 14.1 113 155-274 68-183 (261)
4 3dtn_A Putative methyltransfer 99.8 2.1E-20 7.2E-25 158.6 12.6 111 155-274 42-153 (234)
5 1pjz_A Thiopurine S-methyltran 99.8 1.2E-20 4E-25 157.5 10.6 113 155-268 20-139 (203)
6 3hnr_A Probable methyltransfer 99.8 7.3E-20 2.5E-24 153.7 14.5 106 156-273 44-149 (220)
7 2gb4_A Thiopurine S-methyltran 99.8 3.2E-20 1.1E-24 160.0 11.2 112 156-268 67-190 (252)
8 3h2b_A SAM-dependent methyltra 99.8 6.1E-20 2.1E-24 152.4 11.7 104 158-273 42-145 (203)
9 4hg2_A Methyltransferase type 99.8 2.2E-20 7.5E-25 161.5 8.8 99 157-271 39-137 (257)
10 1kpg_A CFA synthase;, cyclopro 99.8 2.4E-19 8.3E-24 156.8 14.5 111 155-273 62-172 (287)
11 2o57_A Putative sarcosine dime 99.8 1.7E-19 5.7E-24 158.6 13.5 112 155-273 80-191 (297)
12 3bus_A REBM, methyltransferase 99.8 2.2E-19 7.4E-24 155.8 13.9 112 155-273 59-170 (273)
13 3ujc_A Phosphoethanolamine N-m 99.8 2.6E-19 8.9E-24 154.3 13.6 112 155-274 53-164 (266)
14 1vl5_A Unknown conserved prote 99.8 1.8E-19 6E-24 155.5 12.1 110 155-273 35-144 (260)
15 3jwh_A HEN1; methyltransferase 99.8 5.4E-19 1.8E-23 148.4 14.4 114 156-270 28-142 (217)
16 3l8d_A Methyltransferase; stru 99.8 1.8E-19 6.1E-24 153.4 10.7 103 157-271 53-155 (242)
17 3hem_A Cyclopropane-fatty-acyl 99.8 6.2E-19 2.1E-23 155.5 14.0 111 155-273 70-187 (302)
18 3g5l_A Putative S-adenosylmeth 99.8 5.6E-19 1.9E-23 151.6 13.3 104 155-269 42-145 (253)
19 3ou2_A SAM-dependent methyltra 99.8 6.7E-19 2.3E-23 147.2 13.3 107 155-273 44-150 (218)
20 2fk8_A Methoxy mycolic acid sy 99.8 8.9E-19 3.1E-23 155.6 14.5 112 155-274 88-199 (318)
21 1nkv_A Hypothetical protein YJ 99.8 5.3E-19 1.8E-23 151.8 12.2 109 155-271 34-142 (256)
22 3jwg_A HEN1, methyltransferase 99.8 7.2E-19 2.5E-23 147.7 12.8 115 156-271 28-143 (219)
23 3f4k_A Putative methyltransfer 99.8 9.6E-19 3.3E-23 150.3 12.9 109 155-271 44-152 (257)
24 3ofk_A Nodulation protein S; N 99.8 8.8E-19 3E-23 146.8 11.9 106 155-270 49-155 (216)
25 2pxx_A Uncharacterized protein 99.8 1.8E-18 6.3E-23 144.1 13.8 108 156-271 41-161 (215)
26 3dlc_A Putative S-adenosyl-L-m 99.8 4.5E-19 1.5E-23 148.2 9.8 107 159-272 45-151 (219)
27 3mgg_A Methyltransferase; NYSG 99.8 8.2E-19 2.8E-23 152.5 11.0 121 140-271 23-144 (276)
28 3e23_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 145.4 11.5 102 156-271 42-143 (211)
29 3kkz_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 149.8 12.7 109 155-271 44-152 (267)
30 1xxl_A YCGJ protein; structura 99.8 7.4E-19 2.5E-23 149.9 9.8 111 155-274 19-129 (239)
31 2p7i_A Hypothetical protein; p 99.8 1.3E-18 4.4E-23 148.2 11.3 101 157-271 42-143 (250)
32 4htf_A S-adenosylmethionine-de 99.8 7.3E-19 2.5E-23 153.7 9.9 106 157-270 68-174 (285)
33 3ggd_A SAM-dependent methyltra 99.8 8.7E-19 3E-23 149.7 10.1 110 155-274 54-168 (245)
34 3dh0_A SAM dependent methyltra 99.8 2.1E-18 7.1E-23 144.7 11.9 112 155-274 35-148 (219)
35 3orh_A Guanidinoacetate N-meth 99.8 3.7E-19 1.3E-23 151.8 6.9 105 156-269 59-170 (236)
36 2p8j_A S-adenosylmethionine-de 99.8 2E-18 6.9E-23 143.6 11.0 111 156-273 22-132 (209)
37 2xvm_A Tellurite resistance pr 99.8 2.7E-18 9.2E-23 141.5 11.5 109 156-272 31-139 (199)
38 3pfg_A N-methyltransferase; N, 99.8 1E-18 3.5E-23 150.9 9.3 104 157-273 50-155 (263)
39 3bkw_A MLL3908 protein, S-aden 99.8 2.4E-18 8.2E-23 146.4 11.3 105 155-270 41-145 (243)
40 1zx0_A Guanidinoacetate N-meth 99.8 7.8E-19 2.7E-23 149.5 7.9 108 156-270 59-171 (236)
41 1ri5_A MRNA capping enzyme; me 99.8 3E-18 1E-22 150.2 11.7 110 156-270 63-175 (298)
42 3dli_A Methyltransferase; PSI- 99.8 3.2E-18 1.1E-22 145.9 11.5 103 155-272 39-143 (240)
43 3lcc_A Putative methyl chlorid 99.8 2.8E-18 9.7E-23 145.7 11.2 108 157-271 66-173 (235)
44 2gs9_A Hypothetical protein TT 99.8 6.9E-18 2.4E-22 140.8 12.9 100 157-272 36-135 (211)
45 3vc1_A Geranyl diphosphate 2-C 99.8 3.4E-18 1.2E-22 151.6 11.5 112 155-274 115-226 (312)
46 2yqz_A Hypothetical protein TT 99.8 2E-18 6.9E-23 148.5 9.6 104 155-268 37-140 (263)
47 1ve3_A Hypothetical protein PH 99.8 8E-18 2.7E-22 141.6 13.0 107 157-271 38-144 (227)
48 3iv6_A Putative Zn-dependent a 99.8 3.1E-18 1.1E-22 147.9 10.5 107 155-270 43-149 (261)
49 3gu3_A Methyltransferase; alph 99.7 1.1E-17 3.7E-22 146.4 13.2 107 155-271 20-128 (284)
50 2a14_A Indolethylamine N-methy 99.7 2.3E-18 7.7E-23 149.2 8.7 133 139-272 38-200 (263)
51 3ege_A Putative methyltransfer 99.7 4.3E-18 1.5E-22 147.1 9.8 101 155-271 32-132 (261)
52 3sm3_A SAM-dependent methyltra 99.7 2.2E-17 7.5E-22 139.4 13.7 115 156-272 29-144 (235)
53 3m70_A Tellurite resistance pr 99.7 7.6E-18 2.6E-22 147.3 11.1 107 157-272 120-226 (286)
54 3bxo_A N,N-dimethyltransferase 99.7 6.3E-18 2.1E-22 143.4 9.5 104 157-273 40-145 (239)
55 4fsd_A Arsenic methyltransfera 99.7 3.5E-18 1.2E-22 155.9 7.8 112 155-272 81-206 (383)
56 2p35_A Trans-aconitate 2-methy 99.7 2.9E-17 9.9E-22 141.1 13.1 102 155-270 31-133 (259)
57 3g5t_A Trans-aconitate 3-methy 99.7 1.5E-17 5E-22 146.5 11.1 105 156-268 35-148 (299)
58 2vdw_A Vaccinia virus capping 99.7 4.7E-18 1.6E-22 150.2 7.7 114 157-270 48-170 (302)
59 3dp7_A SAM-dependent methyltra 99.7 5.9E-17 2E-21 146.7 14.9 111 157-274 179-292 (363)
60 3ccf_A Cyclopropane-fatty-acyl 99.7 2.3E-17 8E-22 143.7 11.8 103 155-272 55-157 (279)
61 2kw5_A SLR1183 protein; struct 99.7 1.6E-17 5.6E-22 137.6 10.1 105 157-272 30-134 (202)
62 3thr_A Glycine N-methyltransfe 99.7 8.3E-18 2.8E-22 147.4 8.8 112 156-270 56-176 (293)
63 3i9f_A Putative type 11 methyl 99.7 1.4E-17 4.8E-22 134.2 8.8 103 155-274 15-117 (170)
64 3g07_A 7SK snRNA methylphospha 99.7 1.7E-17 5.9E-22 145.8 10.2 113 157-269 46-220 (292)
65 2aot_A HMT, histamine N-methyl 99.7 1.5E-17 5E-22 146.1 9.6 110 156-271 51-174 (292)
66 2qe6_A Uncharacterized protein 99.7 9.7E-17 3.3E-21 139.9 14.5 108 157-272 77-199 (274)
67 3g2m_A PCZA361.24; SAM-depende 99.7 4.1E-17 1.4E-21 143.6 12.1 110 157-271 82-192 (299)
68 1y8c_A S-adenosylmethionine-de 99.7 1.4E-17 4.8E-22 141.6 8.6 103 157-268 37-141 (246)
69 3mti_A RRNA methylase; SAM-dep 99.7 3E-17 1E-21 134.1 10.0 110 155-271 20-137 (185)
70 3ocj_A Putative exported prote 99.7 4E-17 1.4E-21 144.2 11.2 112 155-272 116-230 (305)
71 1wzn_A SAM-dependent methyltra 99.7 1.8E-17 6E-22 142.0 8.2 118 139-269 27-145 (252)
72 3i53_A O-methyltransferase; CO 99.7 1.2E-16 4.1E-21 142.8 13.7 113 155-275 167-280 (332)
73 3cgg_A SAM-dependent methyltra 99.7 1.4E-16 4.7E-21 130.4 12.6 103 156-270 45-148 (195)
74 2avn_A Ubiquinone/menaquinone 99.7 8.9E-17 3E-21 138.7 10.7 100 157-270 54-153 (260)
75 2i62_A Nicotinamide N-methyltr 99.7 3E-17 1E-21 141.4 7.5 117 155-271 54-200 (265)
76 3d2l_A SAM-dependent methyltra 99.7 5.8E-17 2E-21 137.7 8.9 102 157-268 33-136 (243)
77 3uwp_A Histone-lysine N-methyl 99.7 2.3E-16 7.9E-21 142.9 13.2 119 155-280 171-299 (438)
78 3gwz_A MMCR; methyltransferase 99.7 5.4E-16 1.8E-20 140.7 15.4 112 155-274 200-312 (369)
79 2g72_A Phenylethanolamine N-me 99.7 3.7E-17 1.3E-21 143.2 7.2 114 157-270 71-216 (289)
80 3p9n_A Possible methyltransfer 99.7 6.8E-17 2.3E-21 132.7 8.1 108 156-270 43-154 (189)
81 3bkx_A SAM-dependent methyltra 99.7 2.1E-16 7.1E-21 137.1 11.5 112 155-273 41-163 (275)
82 2r3s_A Uncharacterized protein 99.7 2E-16 6.8E-21 141.2 10.9 112 156-274 164-276 (335)
83 1x19_A CRTF-related protein; m 99.7 9E-16 3.1E-20 138.6 14.5 112 155-274 188-300 (359)
84 3e8s_A Putative SAM dependent 99.7 6.2E-17 2.1E-21 135.8 6.2 101 156-272 51-155 (227)
85 3bgv_A MRNA CAP guanine-N7 met 99.7 2.7E-16 9.4E-21 139.3 10.7 114 157-270 34-156 (313)
86 3e05_A Precorrin-6Y C5,15-meth 99.7 1.1E-15 3.7E-20 126.9 13.7 105 155-270 38-143 (204)
87 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.4E-16 1.9E-20 125.5 11.5 104 155-270 23-128 (178)
88 3mcz_A O-methyltransferase; ad 99.7 2.7E-16 9.1E-21 141.5 10.5 111 158-274 180-292 (352)
89 3htx_A HEN1; HEN1, small RNA m 99.7 7.1E-16 2.4E-20 149.4 13.1 113 156-269 720-834 (950)
90 3m33_A Uncharacterized protein 99.6 1.4E-16 4.7E-21 134.7 7.2 92 156-267 47-140 (226)
91 3eey_A Putative rRNA methylase 99.6 8.6E-16 3E-20 126.7 11.7 111 155-270 20-140 (197)
92 1qzz_A RDMB, aclacinomycin-10- 99.6 6.4E-16 2.2E-20 140.1 11.9 111 155-273 180-293 (374)
93 3cc8_A Putative methyltransfer 99.6 4.6E-16 1.6E-20 130.7 10.2 100 156-271 31-132 (230)
94 3njr_A Precorrin-6Y methylase; 99.6 1.4E-15 4.8E-20 126.7 12.8 103 155-270 53-155 (204)
95 3fpf_A Mtnas, putative unchara 99.6 4.4E-16 1.5E-20 136.0 9.9 103 155-270 120-223 (298)
96 3r0q_C Probable protein argini 99.6 2.8E-16 9.5E-21 142.9 8.9 109 155-270 61-170 (376)
97 1af7_A Chemotaxis receptor met 99.6 6.8E-16 2.3E-20 134.2 10.7 112 157-268 105-251 (274)
98 2ift_A Putative methylase HI07 99.6 2.3E-16 7.9E-21 131.1 7.4 109 157-272 53-166 (201)
99 2fyt_A Protein arginine N-meth 99.6 9.4E-16 3.2E-20 137.6 11.6 104 155-266 62-168 (340)
100 2ip2_A Probable phenazine-spec 99.6 7.9E-16 2.7E-20 137.4 10.9 108 159-274 169-277 (334)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2.2E-16 7.4E-21 133.1 6.7 107 157-269 34-150 (218)
102 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.1E-15 3.7E-20 128.0 10.9 107 157-269 41-156 (214)
103 3lbf_A Protein-L-isoaspartate 99.6 9.5E-16 3.2E-20 127.7 10.3 102 155-271 75-176 (210)
104 1dus_A MJ0882; hypothetical pr 99.6 1.9E-15 6.5E-20 123.5 11.9 108 155-271 50-159 (194)
105 1vlm_A SAM-dependent methyltra 99.6 2.6E-16 8.9E-21 132.2 6.9 94 158-271 48-141 (219)
106 2fca_A TRNA (guanine-N(7)-)-me 99.6 6.3E-16 2.2E-20 129.7 9.0 107 157-269 38-153 (213)
107 1nt2_A Fibrillarin-like PRE-rR 99.6 1.9E-15 6.5E-20 126.6 11.8 102 155-269 55-161 (210)
108 3q7e_A Protein arginine N-meth 99.6 7E-16 2.4E-20 139.0 9.7 106 156-267 65-171 (349)
109 3dmg_A Probable ribosomal RNA 99.6 7.9E-16 2.7E-20 140.0 10.0 107 156-270 232-341 (381)
110 3lst_A CALO1 methyltransferase 99.6 1.8E-15 6.3E-20 136.0 12.0 110 155-275 182-292 (348)
111 3gdh_A Trimethylguanosine synt 99.6 9.8E-18 3.3E-22 142.9 -2.9 103 157-268 78-180 (241)
112 1tw3_A COMT, carminomycin 4-O- 99.6 1.3E-15 4.6E-20 137.4 10.9 109 155-271 181-290 (360)
113 3fzg_A 16S rRNA methylase; met 99.6 1E-16 3.5E-21 130.6 3.1 119 135-269 33-152 (200)
114 2y1w_A Histone-arginine methyl 99.6 1.3E-15 4.4E-20 137.2 10.5 107 155-268 48-154 (348)
115 4e2x_A TCAB9; kijanose, tetron 99.6 1.1E-16 3.6E-21 147.5 3.3 105 155-270 105-209 (416)
116 4df3_A Fibrillarin-like rRNA/T 99.6 4.5E-15 1.5E-19 125.7 13.0 109 149-269 69-182 (233)
117 3grz_A L11 mtase, ribosomal pr 99.6 1.2E-15 4.1E-20 126.7 8.6 103 156-271 59-161 (205)
118 3evz_A Methyltransferase; NYSG 99.6 2E-15 6.8E-20 127.5 10.1 106 156-268 54-178 (230)
119 3dr5_A Putative O-methyltransf 99.6 9E-16 3.1E-20 129.6 7.4 112 157-279 56-172 (221)
120 3reo_A (ISO)eugenol O-methyltr 99.6 5.5E-15 1.9E-19 134.0 12.8 104 155-274 201-305 (368)
121 1fbn_A MJ fibrillarin homologu 99.6 8.1E-15 2.8E-19 124.1 13.0 100 155-268 72-177 (230)
122 1vbf_A 231AA long hypothetical 99.6 6.4E-15 2.2E-19 124.5 12.2 100 155-271 68-167 (231)
123 3lpm_A Putative methyltransfer 99.6 1.3E-15 4.5E-20 131.4 8.1 110 155-269 46-176 (259)
124 2ozv_A Hypothetical protein AT 99.6 7.3E-15 2.5E-19 126.9 12.8 110 155-269 34-170 (260)
125 2zfu_A Nucleomethylin, cerebra 99.6 7.8E-16 2.7E-20 128.7 6.4 89 156-272 66-154 (215)
126 2pjd_A Ribosomal RNA small sub 99.6 1.5E-15 5.1E-20 136.5 8.5 106 157-271 196-305 (343)
127 2esr_A Methyltransferase; stru 99.6 1.2E-15 4.2E-20 123.6 7.2 108 156-271 30-140 (177)
128 3ntv_A MW1564 protein; rossman 99.6 9E-16 3.1E-20 130.3 6.5 114 156-280 70-186 (232)
129 3p9c_A Caffeic acid O-methyltr 99.6 3.9E-15 1.3E-19 134.8 11.1 104 155-274 199-303 (364)
130 1xdz_A Methyltransferase GIDB; 99.6 9.2E-16 3.1E-20 130.8 6.6 103 156-270 69-175 (240)
131 2fpo_A Methylase YHHF; structu 99.6 1.4E-15 4.9E-20 126.4 7.5 105 157-270 54-161 (202)
132 4dcm_A Ribosomal RNA large sub 99.6 4.2E-15 1.4E-19 135.0 11.0 112 155-270 220-335 (375)
133 4azs_A Methyltransferase WBDD; 99.6 4.6E-16 1.6E-20 148.7 4.5 110 156-272 65-176 (569)
134 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.5E-15 1.2E-19 127.1 9.3 107 156-268 45-167 (235)
135 4a6d_A Hydroxyindole O-methylt 99.6 3.4E-14 1.2E-18 128.1 16.1 111 155-274 177-288 (353)
136 3tfw_A Putative O-methyltransf 99.6 5.3E-15 1.8E-19 126.9 10.2 113 156-279 62-179 (248)
137 3giw_A Protein of unknown func 99.6 5.2E-15 1.8E-19 127.8 10.0 128 137-273 61-204 (277)
138 1o9g_A RRNA methyltransferase; 99.6 3.3E-15 1.1E-19 128.1 8.8 112 156-272 50-217 (250)
139 2fhp_A Methylase, putative; al 99.6 2.1E-15 7.3E-20 122.9 7.1 107 156-270 43-155 (187)
140 1g6q_1 HnRNP arginine N-methyl 99.6 4.9E-15 1.7E-19 132.3 9.6 105 157-267 38-143 (328)
141 1fp1_D Isoliquiritigenin 2'-O- 99.6 3.6E-15 1.2E-19 135.3 8.8 103 156-274 208-311 (372)
142 3mq2_A 16S rRNA methyltransfer 99.6 3.2E-15 1.1E-19 125.3 7.5 106 155-269 25-140 (218)
143 3u81_A Catechol O-methyltransf 99.6 3.1E-15 1E-19 125.9 7.3 107 157-271 58-172 (221)
144 2frn_A Hypothetical protein PH 99.6 4.4E-15 1.5E-19 129.6 8.5 104 156-271 124-227 (278)
145 1dl5_A Protein-L-isoaspartate 99.6 7.9E-15 2.7E-19 130.3 10.1 102 155-270 73-176 (317)
146 2yxe_A Protein-L-isoaspartate 99.6 8.3E-15 2.8E-19 122.4 9.4 102 155-270 75-178 (215)
147 3b3j_A Histone-arginine methyl 99.6 5.6E-15 1.9E-19 138.2 9.2 106 155-267 156-261 (480)
148 3g89_A Ribosomal RNA small sub 99.6 8E-15 2.7E-19 125.9 9.4 103 156-270 79-185 (249)
149 1l3i_A Precorrin-6Y methyltran 99.6 4.6E-15 1.6E-19 120.9 7.5 105 155-270 31-135 (192)
150 1fp2_A Isoflavone O-methyltran 99.6 6.9E-15 2.3E-19 132.5 9.3 103 156-274 187-293 (352)
151 1jsx_A Glucose-inhibited divis 99.6 9.5E-15 3.3E-19 121.2 9.5 101 157-270 65-166 (207)
152 3q87_B N6 adenine specific DNA 99.6 7.8E-15 2.7E-19 118.6 8.6 97 156-271 22-125 (170)
153 3bzb_A Uncharacterized protein 99.6 2.9E-14 1E-18 124.5 12.8 110 156-268 78-204 (281)
154 3r3h_A O-methyltransferase, SA 99.6 1.1E-15 3.7E-20 130.8 3.3 112 157-279 60-179 (242)
155 1u2z_A Histone-lysine N-methyl 99.6 3.7E-14 1.3E-18 130.4 13.6 115 155-276 240-366 (433)
156 1sui_A Caffeoyl-COA O-methyltr 99.5 8.1E-15 2.8E-19 125.7 8.0 113 157-280 79-200 (247)
157 3p2e_A 16S rRNA methylase; met 99.5 6E-15 2.1E-19 124.8 7.0 107 156-268 23-138 (225)
158 2ipx_A RRNA 2'-O-methyltransfe 99.5 3E-14 1E-18 120.7 11.0 102 155-268 75-181 (233)
159 2yxd_A Probable cobalt-precorr 99.5 1.7E-14 5.7E-19 116.8 9.0 100 155-270 33-132 (183)
160 1p91_A Ribosomal RNA large sub 99.5 2.7E-14 9.3E-19 123.4 10.5 97 156-272 84-181 (269)
161 4dzr_A Protein-(glutamine-N5) 99.5 2.4E-15 8.2E-20 125.0 3.6 107 156-270 29-165 (215)
162 3id6_C Fibrillarin-like rRNA/T 99.5 6.3E-14 2.2E-18 118.8 12.4 104 153-269 72-181 (232)
163 3duw_A OMT, O-methyltransferas 99.5 1.8E-14 6E-19 121.2 8.6 105 156-270 57-168 (223)
164 3tr6_A O-methyltransferase; ce 99.5 8.3E-15 2.8E-19 123.3 6.2 105 157-271 64-176 (225)
165 4hc4_A Protein arginine N-meth 99.5 2.2E-14 7.4E-19 129.8 9.3 104 157-267 83-187 (376)
166 3sso_A Methyltransferase; macr 99.5 5.8E-15 2E-19 133.4 5.0 111 138-271 202-326 (419)
167 1g8a_A Fibrillarin-like PRE-rR 99.5 1.2E-13 4E-18 116.5 12.8 102 155-268 71-177 (227)
168 3c3p_A Methyltransferase; NP_9 99.5 1.5E-14 5.2E-19 120.6 7.1 102 157-269 56-160 (210)
169 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3E-14 1E-18 121.9 9.1 113 156-268 48-172 (246)
170 1yb2_A Hypothetical protein TA 99.5 4.9E-14 1.7E-18 122.6 10.5 103 155-271 108-213 (275)
171 2gpy_A O-methyltransferase; st 99.5 2.4E-14 8.1E-19 121.3 8.3 104 156-269 53-160 (233)
172 1ws6_A Methyltransferase; stru 99.5 6.7E-15 2.3E-19 118.1 4.4 103 157-271 41-149 (171)
173 3c3y_A Pfomt, O-methyltransfer 99.5 3.1E-14 1.1E-18 121.3 8.8 113 157-280 70-191 (237)
174 1jg1_A PIMT;, protein-L-isoasp 99.5 4.3E-14 1.5E-18 120.0 9.5 101 155-270 89-190 (235)
175 3hp7_A Hemolysin, putative; st 99.5 2.2E-14 7.4E-19 125.4 7.4 96 157-268 85-184 (291)
176 2b3t_A Protein methyltransfera 99.5 3.9E-14 1.3E-18 123.3 9.0 107 156-269 108-238 (276)
177 2nxc_A L11 mtase, ribosomal pr 99.5 1.3E-14 4.4E-19 125.0 5.7 102 156-271 119-220 (254)
178 3mb5_A SAM-dependent methyltra 99.5 4.8E-14 1.6E-18 120.9 8.9 103 155-270 91-195 (255)
179 3adn_A Spermidine synthase; am 99.5 6.3E-14 2.2E-18 123.1 9.7 113 156-269 82-198 (294)
180 1ej0_A FTSJ; methyltransferase 99.5 4.5E-14 1.5E-18 113.3 8.1 101 155-272 20-139 (180)
181 1zg3_A Isoflavanone 4'-O-methy 99.5 4.6E-14 1.6E-18 127.3 8.8 101 157-273 193-297 (358)
182 3cbg_A O-methyltransferase; cy 99.5 3.8E-14 1.3E-18 120.3 7.7 112 157-279 72-191 (232)
183 2hnk_A SAM-dependent O-methylt 99.5 1.6E-14 5.3E-19 123.0 5.2 104 156-269 59-181 (239)
184 3gjy_A Spermidine synthase; AP 99.5 6.3E-14 2.2E-18 123.7 9.1 107 158-270 90-201 (317)
185 3opn_A Putative hemolysin; str 99.5 1.8E-14 6.1E-19 122.5 5.0 100 156-268 36-136 (232)
186 2ld4_A Anamorsin; methyltransf 99.5 1.2E-14 4.1E-19 117.8 3.7 90 155-271 10-103 (176)
187 3bwc_A Spermidine synthase; SA 99.5 3.1E-14 1.1E-18 125.8 6.4 112 156-269 94-210 (304)
188 2pbf_A Protein-L-isoaspartate 99.5 4.6E-14 1.6E-18 118.9 7.0 107 155-270 78-194 (227)
189 2pwy_A TRNA (adenine-N(1)-)-me 99.5 7.8E-14 2.7E-18 119.5 8.5 104 155-271 94-200 (258)
190 2yvl_A TRMI protein, hypotheti 99.5 2.4E-13 8.1E-18 115.8 11.2 103 155-270 89-191 (248)
191 1ne2_A Hypothetical protein TA 99.5 1.9E-13 6.6E-18 112.9 9.9 96 156-268 50-145 (200)
192 3tma_A Methyltransferase; thum 99.5 2.4E-13 8.2E-18 122.5 11.3 110 155-270 201-318 (354)
193 3a27_A TYW2, uncharacterized p 99.5 6.4E-14 2.2E-18 121.8 7.2 105 155-272 117-222 (272)
194 2oxt_A Nucleoside-2'-O-methylt 99.5 5.2E-14 1.8E-18 121.9 6.5 107 155-271 72-187 (265)
195 2bm8_A Cephalosporin hydroxyla 99.5 7.2E-14 2.5E-18 119.0 7.2 97 157-269 81-187 (236)
196 1nv8_A HEMK protein; class I a 99.5 4.4E-13 1.5E-17 117.2 12.4 105 157-268 123-248 (284)
197 2plw_A Ribosomal RNA methyltra 99.5 2E-13 6.9E-18 112.6 9.6 98 156-270 21-155 (201)
198 1i1n_A Protein-L-isoaspartate 99.5 1.3E-13 4.3E-18 116.1 8.5 107 155-270 75-183 (226)
199 2avd_A Catechol-O-methyltransf 99.5 5.5E-14 1.9E-18 118.5 5.9 112 156-278 68-187 (229)
200 3lec_A NADB-rossmann superfami 99.4 1.7E-13 6E-18 115.6 8.7 106 156-270 20-126 (230)
201 1i9g_A Hypothetical protein RV 99.4 2E-13 7E-18 118.6 9.4 104 155-270 97-204 (280)
202 2igt_A SAM dependent methyltra 99.4 7.2E-14 2.5E-18 124.9 6.6 111 157-272 153-275 (332)
203 1r18_A Protein-L-isoaspartate( 99.4 6.7E-14 2.3E-18 118.1 6.0 107 155-270 82-195 (227)
204 2h00_A Methyltransferase 10 do 99.4 1.3E-14 4.6E-19 124.4 1.6 108 157-269 65-192 (254)
205 1o54_A SAM-dependent O-methylt 99.4 1.9E-13 6.6E-18 118.8 8.5 104 155-271 110-215 (277)
206 3kr9_A SAM-dependent methyltra 99.4 2.8E-13 9.6E-18 114.1 8.8 105 156-270 14-120 (225)
207 3gnl_A Uncharacterized protein 99.4 2.5E-13 8.6E-18 115.5 8.6 106 156-270 20-126 (244)
208 1mjf_A Spermidine synthase; sp 99.4 7.8E-14 2.7E-18 121.9 5.4 111 157-268 75-192 (281)
209 1ixk_A Methyltransferase; open 99.4 2.2E-13 7.6E-18 120.9 8.3 110 155-270 116-247 (315)
210 1xj5_A Spermidine synthase 1; 99.4 2.1E-13 7.1E-18 121.9 7.9 109 156-268 119-234 (334)
211 2wa2_A Non-structural protein 99.4 1.6E-13 5.5E-18 119.5 6.8 107 155-271 80-195 (276)
212 2b25_A Hypothetical protein; s 99.4 7.4E-13 2.5E-17 118.4 10.4 109 155-270 103-220 (336)
213 1iy9_A Spermidine synthase; ro 99.4 2.5E-13 8.5E-18 118.3 7.0 108 157-268 75-188 (275)
214 1wy7_A Hypothetical protein PH 99.4 1.5E-12 5.2E-17 107.9 11.1 101 155-267 47-147 (207)
215 2i7c_A Spermidine synthase; tr 99.4 2.6E-13 9E-18 118.6 6.7 111 156-268 77-191 (283)
216 1uir_A Polyamine aminopropyltr 99.4 2.3E-13 7.8E-18 120.7 6.3 110 156-269 76-195 (314)
217 2b2c_A Spermidine synthase; be 99.4 1.6E-13 5.5E-18 121.6 5.1 111 157-269 108-222 (314)
218 2pt6_A Spermidine synthase; tr 99.4 2.2E-13 7.6E-18 121.2 5.9 111 157-269 116-230 (321)
219 2qm3_A Predicted methyltransfe 99.4 8.9E-13 3E-17 119.7 9.9 103 157-269 172-277 (373)
220 2o07_A Spermidine synthase; st 99.4 1.9E-13 6.5E-18 120.7 5.2 110 156-269 94-209 (304)
221 1zq9_A Probable dimethyladenos 99.4 1.5E-12 5.3E-17 113.8 10.4 103 155-266 26-144 (285)
222 3ajd_A Putative methyltransfer 99.4 3.5E-13 1.2E-17 117.2 6.3 110 155-270 81-212 (274)
223 2as0_A Hypothetical protein PH 99.4 4.1E-13 1.4E-17 122.8 6.6 110 157-271 217-337 (396)
224 3frh_A 16S rRNA methylase; met 99.4 1.4E-12 4.8E-17 110.0 9.1 103 156-269 104-206 (253)
225 2b78_A Hypothetical protein SM 99.4 2E-13 6.9E-18 124.4 4.2 110 157-271 212-333 (385)
226 2cmg_A Spermidine synthase; tr 99.4 6.3E-13 2.2E-17 114.9 7.2 100 157-269 72-171 (262)
227 3k6r_A Putative transferase PH 99.4 4.2E-13 1.4E-17 116.6 6.0 105 156-272 124-228 (278)
228 1inl_A Spermidine synthase; be 99.4 3.6E-13 1.2E-17 118.5 5.1 108 157-268 90-204 (296)
229 3lcv_B Sisomicin-gentamicin re 99.4 6.4E-13 2.2E-17 113.1 6.3 121 135-270 116-237 (281)
230 2yxl_A PH0851 protein, 450AA l 99.3 4.2E-12 1.4E-16 118.0 11.9 110 155-270 257-390 (450)
231 2nyu_A Putative ribosomal RNA 99.3 1.5E-12 5.3E-17 106.8 7.4 99 155-270 20-146 (196)
232 3v97_A Ribosomal RNA large sub 99.3 6.9E-13 2.4E-17 129.4 5.9 109 157-271 539-659 (703)
233 3c0k_A UPF0064 protein YCCW; P 99.3 1.3E-12 4.3E-17 119.6 6.4 111 157-271 220-341 (396)
234 1wxx_A TT1595, hypothetical pr 99.3 9.2E-13 3.2E-17 119.9 5.3 108 157-271 209-327 (382)
235 3dou_A Ribosomal RNA large sub 99.3 3.3E-12 1.1E-16 105.2 7.6 98 155-270 23-140 (191)
236 3tm4_A TRNA (guanine N2-)-meth 99.3 4.1E-12 1.4E-16 115.2 8.5 107 156-268 216-329 (373)
237 2yx1_A Hypothetical protein MJ 99.3 3E-12 1E-16 114.5 7.1 102 156-273 194-295 (336)
238 2p41_A Type II methyltransfera 99.3 1.6E-12 5.6E-17 114.7 4.8 104 155-270 80-192 (305)
239 4dmg_A Putative uncharacterize 99.3 3.2E-12 1.1E-16 116.5 6.9 107 157-271 214-328 (393)
240 2f8l_A Hypothetical protein LM 99.3 6.4E-12 2.2E-16 112.7 8.3 106 156-269 129-256 (344)
241 1sqg_A SUN protein, FMU protei 99.3 1E-11 3.5E-16 114.7 9.1 109 155-270 244-375 (429)
242 2frx_A Hypothetical protein YE 99.3 1.2E-11 4.2E-16 115.4 9.7 107 157-269 117-246 (479)
243 3m6w_A RRNA methylase; rRNA me 99.2 7.2E-12 2.5E-16 116.2 5.8 108 155-269 99-229 (464)
244 2jjq_A Uncharacterized RNA met 99.2 4.3E-11 1.5E-15 110.2 10.5 100 156-270 289-388 (425)
245 2h1r_A Dimethyladenosine trans 99.2 3.6E-11 1.2E-15 105.8 8.7 99 155-263 40-153 (299)
246 1uwv_A 23S rRNA (uracil-5-)-me 99.2 7.2E-11 2.5E-15 109.1 10.4 103 155-270 284-390 (433)
247 1yub_A Ermam, rRNA methyltrans 99.1 1.9E-12 6.4E-17 110.7 -1.7 104 155-269 27-145 (245)
248 3gru_A Dimethyladenosine trans 99.1 1.2E-10 4.1E-15 102.1 9.7 79 155-242 48-126 (295)
249 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.1E-11 7.1E-16 113.0 4.9 109 155-269 103-234 (456)
250 2qfm_A Spermine synthase; sper 99.1 7.9E-11 2.7E-15 105.3 7.2 114 156-269 187-314 (364)
251 1qam_A ERMC' methyltransferase 99.1 6.2E-10 2.1E-14 95.0 12.6 74 155-238 28-102 (244)
252 2okc_A Type I restriction enzy 99.1 1.3E-10 4.6E-15 107.7 8.6 110 155-269 169-307 (445)
253 3ldg_A Putative uncharacterize 99.1 6.6E-10 2.2E-14 100.9 12.2 109 155-269 192-343 (384)
254 3k0b_A Predicted N6-adenine-sp 99.1 2.7E-10 9.1E-15 103.9 9.6 109 155-269 199-350 (393)
255 2ih2_A Modification methylase 99.1 1.4E-10 4.9E-15 106.4 7.7 98 156-269 38-164 (421)
256 3ldu_A Putative methylase; str 99.1 3.9E-10 1.3E-14 102.6 9.8 109 155-269 193-344 (385)
257 2xyq_A Putative 2'-O-methyl tr 99.0 5.1E-10 1.7E-14 97.8 8.2 94 155-270 61-172 (290)
258 3tqs_A Ribosomal RNA small sub 99.0 8.1E-10 2.8E-14 94.9 9.0 76 155-240 27-106 (255)
259 3fut_A Dimethyladenosine trans 99.0 1.1E-09 3.7E-14 94.8 8.6 88 155-254 45-133 (271)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.9 3E-09 1E-13 93.9 10.2 107 155-268 100-233 (309)
261 3bt7_A TRNA (uracil-5-)-methyl 98.9 1.8E-09 6E-14 97.7 8.3 97 158-269 214-326 (369)
262 2r6z_A UPF0341 protein in RSP 98.9 3.8E-10 1.3E-14 97.2 3.2 107 156-270 82-217 (258)
263 3axs_A Probable N(2),N(2)-dime 98.9 6.6E-10 2.3E-14 101.0 4.7 102 157-269 52-158 (392)
264 2dul_A N(2),N(2)-dimethylguano 98.9 5.4E-10 1.8E-14 101.3 3.7 100 157-268 47-163 (378)
265 3ftd_A Dimethyladenosine trans 98.9 4.2E-09 1.4E-13 90.1 8.4 75 155-240 29-105 (249)
266 4gqb_A Protein arginine N-meth 98.9 6.6E-09 2.3E-13 99.4 10.5 103 157-266 357-464 (637)
267 3cvo_A Methyltransferase-like 98.8 1.2E-08 4.2E-13 84.1 9.6 105 157-274 30-158 (202)
268 3evf_A RNA-directed RNA polyme 98.8 4.2E-09 1.5E-13 90.1 6.6 105 155-268 72-183 (277)
269 1qyr_A KSGA, high level kasuga 98.8 4.2E-09 1.4E-13 90.3 6.5 75 155-240 19-100 (252)
270 3v97_A Ribosomal RNA large sub 98.8 2.1E-08 7E-13 97.9 10.9 109 155-268 188-346 (703)
271 2ar0_A M.ecoki, type I restric 98.8 1.1E-08 3.7E-13 97.0 8.5 114 155-269 167-312 (541)
272 1m6y_A S-adenosyl-methyltransf 98.8 6.1E-09 2.1E-13 91.5 5.4 77 155-238 24-106 (301)
273 3uzu_A Ribosomal RNA small sub 98.8 1.3E-08 4.4E-13 88.5 7.4 75 155-239 40-123 (279)
274 2efj_A 3,7-dimethylxanthine me 98.8 4.9E-08 1.7E-12 88.2 11.4 109 158-274 53-230 (384)
275 3o4f_A Spermidine synthase; am 98.7 4.7E-08 1.6E-12 85.1 10.5 113 155-268 81-197 (294)
276 3b5i_A S-adenosyl-L-methionine 98.7 6.2E-08 2.1E-12 87.4 10.8 118 156-274 51-230 (374)
277 3ua3_A Protein arginine N-meth 98.7 1E-08 3.6E-13 98.1 4.6 104 157-266 409-531 (745)
278 3ll7_A Putative methyltransfer 98.6 1E-08 3.6E-13 93.4 3.2 74 157-237 93-170 (410)
279 3gcz_A Polyprotein; flavivirus 98.6 1.5E-08 5E-13 86.9 3.2 106 155-269 88-201 (282)
280 1m6e_X S-adenosyl-L-methionnin 98.6 1.1E-07 3.6E-12 85.3 7.7 111 156-271 50-211 (359)
281 2oyr_A UPF0341 protein YHIQ; a 98.6 2E-08 7E-13 86.2 2.8 84 159-243 90-177 (258)
282 3khk_A Type I restriction-modi 98.5 1.1E-07 3.6E-12 90.2 7.4 105 159-268 246-394 (544)
283 3lkd_A Type I restriction-modi 98.5 7.1E-07 2.4E-11 84.4 12.4 109 156-269 220-358 (542)
284 3eld_A Methyltransferase; flav 98.5 3.7E-07 1.3E-11 78.8 8.1 105 155-268 79-190 (300)
285 3c6k_A Spermine synthase; sper 98.4 2.6E-07 8.8E-12 83.0 6.7 113 156-268 204-330 (381)
286 3s1s_A Restriction endonucleas 98.4 8.3E-07 2.8E-11 86.4 10.2 112 156-269 320-465 (878)
287 2qy6_A UPF0209 protein YFCK; s 98.4 2.4E-07 8.2E-12 79.5 4.7 112 156-267 59-211 (257)
288 2k4m_A TR8_protein, UPF0146 pr 98.4 3.6E-07 1.2E-11 70.7 5.1 83 157-268 35-120 (153)
289 4fzv_A Putative methyltransfer 98.3 1.4E-06 4.9E-11 78.0 8.4 115 155-269 146-284 (359)
290 2wk1_A NOVP; transferase, O-me 98.2 1.4E-06 4.7E-11 75.6 6.2 107 156-271 105-245 (282)
291 4auk_A Ribosomal RNA large sub 98.2 1.1E-05 3.7E-10 72.2 10.8 98 155-269 209-306 (375)
292 2px2_A Genome polyprotein [con 98.1 9.1E-06 3.1E-10 68.7 7.9 105 155-270 71-184 (269)
293 3lkz_A Non-structural protein 98.1 1.7E-05 5.9E-10 68.2 9.5 107 155-271 92-206 (321)
294 1wg8_A Predicted S-adenosylmet 98.1 9.3E-06 3.2E-10 69.9 8.0 72 155-237 20-96 (285)
295 2vz8_A Fatty acid synthase; tr 98.0 1.3E-06 4.4E-11 95.6 0.5 104 156-270 1239-1349(2512)
296 3p8z_A Mtase, non-structural p 97.9 2.2E-05 7.4E-10 65.4 6.9 110 155-274 76-191 (267)
297 3ufb_A Type I restriction-modi 97.8 0.00012 4.2E-09 69.0 10.7 108 155-268 215-361 (530)
298 1rjd_A PPM1P, carboxy methyl t 97.7 0.00021 7.2E-09 63.4 10.2 115 157-273 97-236 (334)
299 2zig_A TTHA0409, putative modi 97.6 0.00011 3.8E-09 64.0 7.1 59 138-202 221-279 (297)
300 3g7u_A Cytosine-specific methy 97.5 0.00035 1.2E-08 63.0 9.8 102 159-273 3-122 (376)
301 1g55_A DNA cytosine methyltran 97.2 0.0003 1E-08 62.6 5.4 103 158-273 2-122 (343)
302 2oo3_A Protein involved in cat 97.0 0.00069 2.3E-08 58.3 5.0 102 158-270 92-199 (283)
303 2uyo_A Hypothetical protein ML 96.9 0.0074 2.5E-07 52.8 11.2 109 159-273 104-221 (310)
304 2c7p_A Modification methylase 96.9 0.0029 9.8E-08 55.9 8.5 101 158-273 11-123 (327)
305 1i4w_A Mitochondrial replicati 96.9 0.002 6.7E-08 57.5 7.3 59 157-224 58-117 (353)
306 3tka_A Ribosomal RNA small sub 96.9 0.001 3.4E-08 58.6 5.0 73 155-237 55-135 (347)
307 1g60_A Adenine-specific methyl 96.9 0.002 6.9E-08 54.8 6.9 59 138-202 198-256 (260)
308 3qv2_A 5-cytosine DNA methyltr 96.5 0.0056 1.9E-07 54.0 7.3 105 157-273 9-133 (327)
309 3r24_A NSP16, 2'-O-methyl tran 96.4 0.0057 1.9E-07 52.7 6.5 93 155-268 107-216 (344)
310 4h0n_A DNMT2; SAH binding, tra 96.3 0.008 2.7E-07 53.1 7.2 102 159-273 4-122 (333)
311 2qrv_A DNA (cytosine-5)-methyl 96.3 0.021 7.3E-07 49.5 9.6 108 155-273 13-143 (295)
312 1pqw_A Polyketide synthase; ro 96.1 0.021 7.3E-07 45.9 8.2 92 155-269 36-137 (198)
313 1f8f_A Benzyl alcohol dehydrog 95.9 0.023 7.7E-07 50.7 8.3 96 155-270 188-290 (371)
314 3me5_A Cytosine-specific methy 95.8 0.018 6E-07 53.5 7.3 107 157-273 87-230 (482)
315 2dph_A Formaldehyde dismutase; 95.8 0.018 6.1E-07 52.0 7.2 102 155-269 183-299 (398)
316 3tos_A CALS11; methyltransfera 95.8 0.15 5.2E-06 43.1 12.3 105 157-269 69-217 (257)
317 3ubt_Y Modification methylase 95.7 0.029 1E-06 49.1 8.0 100 159-272 1-112 (331)
318 1zkd_A DUF185; NESG, RPR58, st 95.7 0.046 1.6E-06 49.2 9.0 78 156-245 79-164 (387)
319 4ej6_A Putative zinc-binding d 95.7 0.066 2.2E-06 47.7 10.2 99 155-270 180-285 (370)
320 3s2e_A Zinc-containing alcohol 95.6 0.033 1.1E-06 48.9 7.9 95 155-269 164-263 (340)
321 3two_A Mannitol dehydrogenase; 95.5 0.018 6.3E-07 50.8 5.9 92 155-270 174-266 (348)
322 1v3u_A Leukotriene B4 12- hydr 95.4 0.044 1.5E-06 47.9 7.8 92 155-269 143-244 (333)
323 1pl8_A Human sorbitol dehydrog 95.4 0.13 4.3E-06 45.5 10.9 95 155-269 169-273 (356)
324 1e3j_A NADP(H)-dependent ketos 95.2 0.1 3.5E-06 46.0 9.9 95 155-269 166-271 (352)
325 4b7c_A Probable oxidoreductase 95.2 0.055 1.9E-06 47.4 8.0 95 155-269 147-248 (336)
326 3m6i_A L-arabinitol 4-dehydrog 95.2 0.12 4E-06 45.8 10.2 97 155-269 177-283 (363)
327 3uog_A Alcohol dehydrogenase; 95.2 0.033 1.1E-06 49.5 6.5 96 154-270 186-288 (363)
328 2j3h_A NADP-dependent oxidored 95.1 0.066 2.3E-06 47.0 8.2 95 155-269 153-255 (345)
329 3fpc_A NADP-dependent alcohol 95.1 0.064 2.2E-06 47.3 8.1 96 155-270 164-267 (352)
330 3vyw_A MNMC2; tRNA wobble urid 95.0 0.05 1.7E-06 47.3 6.8 108 156-267 95-224 (308)
331 1kol_A Formaldehyde dehydrogen 95.0 0.12 4.1E-06 46.4 9.7 100 155-269 183-300 (398)
332 3gms_A Putative NADPH:quinone 94.9 0.069 2.3E-06 46.9 7.8 95 155-270 142-244 (340)
333 3qwb_A Probable quinone oxidor 94.8 0.14 4.8E-06 44.7 9.3 95 155-270 146-248 (334)
334 3ip1_A Alcohol dehydrogenase, 94.6 0.34 1.2E-05 43.5 11.7 100 155-269 211-318 (404)
335 1uuf_A YAHK, zinc-type alcohol 94.5 0.023 8E-07 50.7 3.7 95 155-269 192-288 (369)
336 1yb5_A Quinone oxidoreductase; 94.3 0.17 5.8E-06 44.7 8.8 92 155-269 168-269 (351)
337 3jyn_A Quinone oxidoreductase; 94.3 0.14 4.8E-06 44.5 8.2 95 155-270 138-240 (325)
338 4eye_A Probable oxidoreductase 94.3 0.093 3.2E-06 46.1 7.0 93 155-269 157-257 (342)
339 1rjw_A ADH-HT, alcohol dehydro 94.3 0.14 4.8E-06 44.9 8.2 93 155-269 162-261 (339)
340 1jvb_A NAD(H)-dependent alcoho 94.2 0.099 3.4E-06 46.0 7.1 96 155-270 168-272 (347)
341 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.016 5.4E-07 51.1 1.9 95 157-269 170-269 (344)
342 2py6_A Methyltransferase FKBM; 94.1 0.082 2.8E-06 47.9 6.5 48 155-202 224-274 (409)
343 2eih_A Alcohol dehydrogenase; 94.1 0.17 5.9E-06 44.3 8.5 93 155-270 164-266 (343)
344 3nx4_A Putative oxidoreductase 94.1 0.088 3E-06 45.7 6.4 91 160-270 149-242 (324)
345 3jv7_A ADH-A; dehydrogenase, n 94.0 0.084 2.9E-06 46.4 6.2 95 155-270 169-271 (345)
346 3goh_A Alcohol dehydrogenase, 94.0 0.063 2.2E-06 46.6 5.3 89 154-268 139-228 (315)
347 2d8a_A PH0655, probable L-thre 94.0 0.33 1.1E-05 42.6 10.1 94 157-270 167-268 (348)
348 1qor_A Quinone oxidoreductase; 93.9 0.27 9.3E-06 42.7 9.2 93 155-270 138-240 (327)
349 1cdo_A Alcohol dehydrogenase; 93.9 0.17 5.8E-06 45.0 8.0 96 155-270 190-295 (374)
350 2j8z_A Quinone oxidoreductase; 93.7 0.24 8.1E-06 43.7 8.6 95 155-270 160-262 (354)
351 1boo_A Protein (N-4 cytosine-s 93.7 0.15 5E-06 44.6 7.1 59 139-203 239-297 (323)
352 3uko_A Alcohol dehydrogenase c 93.7 0.19 6.3E-06 44.8 7.8 96 155-270 191-296 (378)
353 4dvj_A Putative zinc-dependent 93.6 0.37 1.3E-05 42.6 9.8 93 157-268 171-269 (363)
354 2hcy_A Alcohol dehydrogenase 1 93.6 0.095 3.2E-06 46.1 5.7 94 155-270 167-270 (347)
355 2fzw_A Alcohol dehydrogenase c 93.6 0.23 7.8E-06 44.1 8.3 95 155-269 188-292 (373)
356 3fwz_A Inner membrane protein 93.6 0.65 2.2E-05 34.9 9.8 93 158-268 7-104 (140)
357 1e3i_A Alcohol dehydrogenase, 93.5 0.44 1.5E-05 42.3 10.0 95 155-269 193-297 (376)
358 2jhf_A Alcohol dehydrogenase E 93.5 0.32 1.1E-05 43.1 9.1 95 155-269 189-293 (374)
359 1p0f_A NADP-dependent alcohol 93.4 0.29 1E-05 43.4 8.7 95 155-269 189-293 (373)
360 2c0c_A Zinc binding alcohol de 93.4 0.26 8.8E-06 43.7 8.3 94 155-269 161-261 (362)
361 2zig_A TTHA0409, putative modi 93.2 0.043 1.5E-06 47.4 2.7 56 213-268 21-96 (297)
362 2zb4_A Prostaglandin reductase 93.1 0.29 1E-05 43.0 8.1 93 155-269 156-260 (357)
363 1wly_A CAAR, 2-haloacrylate re 93.0 0.31 1.1E-05 42.4 8.2 93 155-270 143-245 (333)
364 3swr_A DNA (cytosine-5)-methyl 92.9 0.22 7.4E-06 50.2 7.6 104 156-272 538-671 (1002)
365 4dup_A Quinone oxidoreductase; 92.8 0.21 7E-06 44.1 6.7 96 154-270 164-266 (353)
366 3krt_A Crotonyl COA reductase; 92.8 0.46 1.6E-05 43.4 9.3 95 154-269 225-344 (456)
367 2dq4_A L-threonine 3-dehydroge 92.8 0.11 3.9E-06 45.5 4.9 90 157-269 164-262 (343)
368 1eg2_A Modification methylase 92.7 0.24 8.4E-06 43.2 6.9 61 137-203 227-290 (319)
369 1xa0_A Putative NADPH dependen 92.5 0.12 4.2E-06 44.9 4.8 97 155-269 146-246 (328)
370 4ft4_B DNA (cytosine-5)-methyl 92.3 0.2 6.9E-06 49.2 6.6 48 155-202 209-262 (784)
371 1piw_A Hypothetical zinc-type 92.2 0.062 2.1E-06 47.6 2.5 96 155-269 177-276 (360)
372 1tt7_A YHFP; alcohol dehydroge 92.1 0.16 5.4E-06 44.3 4.9 97 155-269 147-247 (330)
373 1vj0_A Alcohol dehydrogenase, 92.1 0.25 8.6E-06 44.0 6.3 96 155-270 193-299 (380)
374 1iz0_A Quinone oxidoreductase; 91.9 0.038 1.3E-06 47.7 0.7 93 155-269 123-218 (302)
375 2b5w_A Glucose dehydrogenase; 91.8 0.32 1.1E-05 42.9 6.6 89 159-270 174-274 (357)
376 3iei_A Leucine carboxyl methyl 91.6 1.4 4.8E-05 38.6 10.5 116 157-274 90-234 (334)
377 4a0s_A Octenoyl-COA reductase/ 91.5 0.51 1.7E-05 42.9 7.9 98 154-269 217-336 (447)
378 3c85_A Putative glutathione-re 91.3 1.6 5.4E-05 34.2 9.7 92 158-268 39-138 (183)
379 3ps9_A TRNA 5-methylaminomethy 91.2 0.19 6.7E-06 48.4 4.9 111 157-267 66-217 (676)
380 4a2c_A Galactitol-1-phosphate 91.2 1.6 5.5E-05 37.9 10.6 96 155-270 158-261 (346)
381 3pvc_A TRNA 5-methylaminomethy 91.0 0.18 6.3E-06 48.7 4.6 112 156-267 57-209 (689)
382 3gaz_A Alcohol dehydrogenase s 90.9 0.61 2.1E-05 40.8 7.5 92 154-269 147-246 (343)
383 4eez_A Alcohol dehydrogenase 1 90.7 0.4 1.4E-05 41.9 6.2 98 155-269 161-263 (348)
384 3tqh_A Quinone oxidoreductase; 90.7 0.84 2.9E-05 39.4 8.2 92 155-268 150-244 (321)
385 2cdc_A Glucose dehydrogenase g 90.5 0.67 2.3E-05 40.9 7.5 88 158-270 181-279 (366)
386 3fbg_A Putative arginate lyase 90.4 0.83 2.8E-05 40.0 7.9 91 157-268 150-247 (346)
387 3l9w_A Glutathione-regulated p 90.3 1.3 4.6E-05 40.0 9.4 93 158-268 4-101 (413)
388 1lss_A TRK system potassium up 90.3 3.7 0.00013 29.9 10.6 90 158-267 4-100 (140)
389 4f3n_A Uncharacterized ACR, CO 90.0 0.5 1.7E-05 43.0 6.2 44 158-201 138-187 (432)
390 3ggo_A Prephenate dehydrogenas 89.9 2.2 7.5E-05 36.9 10.1 88 159-266 34-125 (314)
391 3llv_A Exopolyphosphatase-rela 89.5 2.9 9.8E-05 31.0 9.4 90 159-268 7-102 (141)
392 1boo_A Protein (N-4 cytosine-s 89.0 0.18 6.3E-06 44.0 2.5 57 212-268 13-83 (323)
393 2vn8_A Reticulon-4-interacting 89.0 0.18 6.2E-06 44.8 2.5 94 155-268 181-279 (375)
394 1yqd_A Sinapyl alcohol dehydro 88.7 0.28 9.6E-06 43.5 3.5 94 157-269 187-282 (366)
395 2cf5_A Atccad5, CAD, cinnamyl 88.6 0.16 5.6E-06 44.8 1.9 96 155-269 177-275 (357)
396 3av4_A DNA (cytosine-5)-methyl 88.4 1.3 4.6E-05 45.8 8.6 46 157-202 850-896 (1330)
397 4eso_A Putative oxidoreductase 87.6 1.9 6.4E-05 35.9 7.8 101 157-268 7-137 (255)
398 3gqv_A Enoyl reductase; medium 86.8 2.2 7.5E-05 37.6 8.2 93 156-269 163-263 (371)
399 1id1_A Putative potassium chan 86.8 4.3 0.00015 30.6 9.0 92 159-268 4-104 (153)
400 2vhw_A Alanine dehydrogenase; 86.8 0.35 1.2E-05 43.2 3.0 100 157-268 167-267 (377)
401 3ius_A Uncharacterized conserv 86.8 4 0.00014 34.0 9.6 93 159-268 6-101 (286)
402 1pjc_A Protein (L-alanine dehy 86.5 0.38 1.3E-05 42.7 3.0 99 158-268 167-266 (361)
403 3grk_A Enoyl-(acyl-carrier-pro 85.6 3.5 0.00012 35.0 8.6 104 157-269 30-169 (293)
404 3pxx_A Carveol dehydrogenase; 85.5 3.2 0.00011 34.7 8.3 104 157-268 9-152 (287)
405 3pi7_A NADH oxidoreductase; gr 85.4 1.4 4.6E-05 38.6 6.0 91 159-270 166-264 (349)
406 4dcm_A Ribosomal RNA large sub 85.0 7 0.00024 34.6 10.6 99 157-269 38-136 (375)
407 2eez_A Alanine dehydrogenase; 84.9 0.54 1.9E-05 41.8 3.2 100 157-268 165-265 (369)
408 2g1u_A Hypothetical protein TM 84.7 2.3 7.8E-05 32.3 6.4 96 156-268 17-117 (155)
409 3d1l_A Putative NADP oxidoredu 84.5 7.3 0.00025 32.2 10.0 89 159-268 11-101 (266)
410 3oig_A Enoyl-[acyl-carrier-pro 84.4 5.2 0.00018 33.1 9.0 106 157-269 6-147 (266)
411 3l4b_C TRKA K+ channel protien 83.5 7.6 0.00026 31.1 9.5 89 160-268 2-98 (218)
412 4dkj_A Cytosine-specific methy 81.8 3.1 0.0001 37.5 6.9 45 158-202 10-60 (403)
413 3ijr_A Oxidoreductase, short c 80.8 7.3 0.00025 32.9 8.7 104 157-268 46-181 (291)
414 3k96_A Glycerol-3-phosphate de 80.7 9 0.00031 33.6 9.5 101 158-268 29-132 (356)
415 2g5c_A Prephenate dehydrogenas 80.4 11 0.00036 31.5 9.6 88 160-267 3-94 (281)
416 3ce6_A Adenosylhomocysteinase; 80.0 2.7 9.3E-05 38.9 6.0 89 156-269 272-361 (494)
417 2f1k_A Prephenate dehydrogenas 79.2 12 0.00043 31.0 9.6 85 160-266 2-88 (279)
418 4a27_A Synaptic vesicle membra 79.1 1.6 5.6E-05 38.1 4.1 91 155-269 140-238 (349)
419 2km1_A Protein DRE2; yeast, an 79.0 1 3.4E-05 34.1 2.2 41 226-267 55-96 (136)
420 2zwa_A Leucine carboxyl methyl 78.9 8.2 0.00028 37.1 9.3 114 157-273 107-258 (695)
421 1zsy_A Mitochondrial 2-enoyl t 78.3 6.3 0.00022 34.3 7.7 97 155-269 165-270 (357)
422 3edm_A Short chain dehydrogena 77.7 5.4 0.00019 33.0 6.8 104 157-268 7-142 (259)
423 3hwr_A 2-dehydropantoate 2-red 77.3 9.4 0.00032 32.7 8.4 102 157-270 18-121 (318)
424 4fs3_A Enoyl-[acyl-carrier-pro 77.2 10 0.00035 31.3 8.4 106 157-269 5-146 (256)
425 3c24_A Putative oxidoreductase 77.1 15 0.00051 30.8 9.5 84 159-266 12-98 (286)
426 3g0o_A 3-hydroxyisobutyrate de 77.0 9.3 0.00032 32.4 8.2 89 158-267 7-100 (303)
427 4dio_A NAD(P) transhydrogenase 76.7 3.7 0.00013 36.9 5.7 42 157-198 189-231 (405)
428 2ae2_A Protein (tropinone redu 76.7 21 0.00073 29.2 10.2 75 157-239 8-96 (260)
429 3k31_A Enoyl-(acyl-carrier-pro 76.7 6.2 0.00021 33.4 7.0 104 157-269 29-168 (296)
430 1g60_A Adenine-specific methyl 76.6 1.8 6.2E-05 36.2 3.5 54 215-268 6-73 (260)
431 3ek2_A Enoyl-(acyl-carrier-pro 76.6 5.5 0.00019 32.9 6.5 106 155-269 11-153 (271)
432 2ew2_A 2-dehydropantoate 2-red 76.5 19 0.00065 30.2 10.1 104 159-270 4-109 (316)
433 3gt0_A Pyrroline-5-carboxylate 75.9 2.5 8.6E-05 34.9 4.1 87 159-266 3-94 (247)
434 3is3_A 17BETA-hydroxysteroid d 75.7 9.9 0.00034 31.5 7.9 106 157-270 17-153 (270)
435 2rir_A Dipicolinate synthase, 75.1 9.6 0.00033 32.4 7.8 88 157-268 156-245 (300)
436 1l7d_A Nicotinamide nucleotide 74.7 1.7 5.8E-05 38.7 2.9 42 157-198 171-213 (384)
437 3p2y_A Alanine dehydrogenase/p 74.5 3.9 0.00013 36.5 5.1 42 157-198 183-225 (381)
438 1wma_A Carbonyl reductase [NAD 73.1 2.9 0.0001 34.5 3.9 102 158-268 4-137 (276)
439 3v2g_A 3-oxoacyl-[acyl-carrier 73.0 15 0.00052 30.5 8.4 104 157-268 30-164 (271)
440 1bg6_A N-(1-D-carboxylethyl)-L 72.9 9.5 0.00033 32.9 7.4 100 159-268 5-108 (359)
441 1eg2_A Modification methylase 72.9 2 6.9E-05 37.3 2.9 55 214-268 39-105 (319)
442 3i83_A 2-dehydropantoate 2-red 72.6 18 0.00063 30.9 9.0 98 159-271 3-107 (320)
443 2hmt_A YUAA protein; RCK, KTN, 72.4 14 0.00048 26.7 7.3 90 159-268 7-103 (144)
444 1gu7_A Enoyl-[acyl-carrier-pro 72.4 2.2 7.5E-05 37.4 3.1 98 155-270 164-276 (364)
445 1qsg_A Enoyl-[acyl-carrier-pro 72.2 25 0.00084 28.8 9.5 100 158-269 9-148 (265)
446 3abi_A Putative uncharacterize 72.0 2.5 8.4E-05 37.3 3.3 68 156-238 14-85 (365)
447 2gdz_A NAD+-dependent 15-hydro 71.8 18 0.00061 29.8 8.5 77 158-240 7-96 (267)
448 3lyl_A 3-oxoacyl-(acyl-carrier 71.8 11 0.00038 30.6 7.2 74 158-239 5-91 (247)
449 3d4o_A Dipicolinate synthase s 71.5 13 0.00045 31.4 7.8 88 157-268 154-243 (293)
450 3r3s_A Oxidoreductase; structu 71.4 10 0.00034 32.1 7.0 105 157-269 48-185 (294)
451 3b1f_A Putative prephenate deh 71.4 34 0.0012 28.4 10.4 88 159-266 7-98 (290)
452 2aef_A Calcium-gated potassium 71.3 17 0.00059 29.3 8.2 90 158-268 9-104 (234)
453 1spx_A Short-chain reductase f 71.3 7.9 0.00027 32.2 6.2 74 158-239 6-95 (278)
454 3trk_A Nonstructural polyprote 71.1 1.2 4E-05 37.7 0.8 42 228-269 209-259 (324)
455 3gvp_A Adenosylhomocysteinase 70.3 8.6 0.00029 34.9 6.4 87 157-268 219-306 (435)
456 1zcj_A Peroxisomal bifunctiona 70.3 31 0.0011 31.3 10.4 100 158-266 37-147 (463)
457 2hwk_A Helicase NSP2; rossman 69.5 3.5 0.00012 35.2 3.4 52 218-270 195-255 (320)
458 3tri_A Pyrroline-5-carboxylate 69.1 11 0.00039 31.6 6.8 87 159-266 4-95 (280)
459 3f9i_A 3-oxoacyl-[acyl-carrier 68.7 17 0.00058 29.4 7.6 74 156-240 12-94 (249)
460 2cvz_A Dehydrogenase, 3-hydrox 68.4 17 0.0006 30.1 7.8 84 160-267 3-88 (289)
461 2vz8_A Fatty acid synthase; tr 68.1 10 0.00036 42.1 7.7 97 155-268 1665-1769(2512)
462 1g0o_A Trihydroxynaphthalene r 67.9 15 0.00051 30.6 7.3 104 158-269 29-163 (283)
463 1hdc_A 3-alpha, 20 beta-hydrox 67.6 15 0.00051 30.1 7.1 71 158-239 5-88 (254)
464 3slk_A Polyketide synthase ext 67.6 11 0.00039 36.8 7.2 93 154-269 342-442 (795)
465 4g81_D Putative hexonate dehyd 67.5 9 0.00031 32.0 5.7 104 157-268 8-144 (255)
466 1xg5_A ARPG836; short chain de 67.4 36 0.0012 28.1 9.6 76 158-239 32-120 (279)
467 4g65_A TRK system potassium up 67.1 9.5 0.00032 34.8 6.2 66 158-237 3-75 (461)
468 4e21_A 6-phosphogluconate dehy 66.8 6.4 0.00022 34.7 4.8 90 158-267 22-113 (358)
469 4hp8_A 2-deoxy-D-gluconate 3-d 66.5 51 0.0018 27.2 10.1 70 157-238 8-87 (247)
470 4e12_A Diketoreductase; oxidor 65.9 16 0.00055 30.6 7.1 100 159-266 5-118 (283)
471 3hn2_A 2-dehydropantoate 2-red 65.0 8.7 0.0003 32.8 5.2 100 159-270 3-104 (312)
472 2i6t_A Ubiquitin-conjugating e 64.0 13 0.00044 31.9 6.1 99 157-270 13-126 (303)
473 3u5t_A 3-oxoacyl-[acyl-carrier 64.0 15 0.00052 30.4 6.5 104 157-268 26-160 (267)
474 3guy_A Short-chain dehydrogena 63.9 42 0.0014 26.7 9.1 69 160-239 3-81 (230)
475 1cyd_A Carbonyl reductase; sho 63.8 49 0.0017 26.3 9.5 70 157-239 6-85 (244)
476 3dmg_A Probable ribosomal RNA 63.6 9.6 0.00033 33.8 5.4 94 157-268 45-138 (381)
477 3n58_A Adenosylhomocysteinase; 63.3 15 0.0005 33.6 6.5 88 156-268 245-333 (464)
478 3ksu_A 3-oxoacyl-acyl carrier 61.1 15 0.00051 30.3 5.9 103 157-268 10-146 (262)
479 2pd4_A Enoyl-[acyl-carrier-pro 61.0 30 0.001 28.6 7.8 100 158-269 6-144 (275)
480 1lld_A L-lactate dehydrogenase 60.5 53 0.0018 27.7 9.5 104 157-270 6-125 (319)
481 2v6b_A L-LDH, L-lactate dehydr 60.1 68 0.0023 27.1 10.1 102 160-270 2-117 (304)
482 3nrc_A Enoyl-[acyl-carrier-pro 59.3 52 0.0018 27.1 9.1 72 157-240 25-113 (280)
483 3h9u_A Adenosylhomocysteinase; 59.1 16 0.00053 33.2 5.9 41 157-197 210-251 (436)
484 1lnq_A MTHK channels, potassiu 58.9 36 0.0012 29.1 8.2 89 158-268 115-210 (336)
485 2h7i_A Enoyl-[acyl-carrier-pro 58.6 41 0.0014 27.6 8.3 102 157-269 6-148 (269)
486 4imr_A 3-oxoacyl-(acyl-carrier 58.2 14 0.00048 30.8 5.3 75 157-239 32-118 (275)
487 1vpd_A Tartronate semialdehyde 58.2 13 0.00043 31.3 5.0 87 159-267 6-97 (299)
488 3gg2_A Sugar dehydrogenase, UD 58.0 35 0.0012 30.9 8.2 104 159-267 3-120 (450)
489 4ezb_A Uncharacterized conserv 58.0 43 0.0015 28.5 8.5 85 159-267 25-119 (317)
490 1h2b_A Alcohol dehydrogenase; 57.9 15 0.00052 31.9 5.7 94 155-269 184-285 (359)
491 3imf_A Short chain dehydrogena 57.7 31 0.0011 28.1 7.3 74 158-239 6-92 (257)
492 3qiv_A Short-chain dehydrogena 57.6 21 0.00073 28.9 6.2 75 157-239 8-95 (253)
493 1x0v_A GPD-C, GPDH-C, glycerol 57.2 23 0.00078 30.5 6.6 101 159-268 9-123 (354)
494 4fn4_A Short chain dehydrogena 57.1 23 0.00079 29.4 6.3 74 157-238 6-92 (254)
495 3qha_A Putative oxidoreductase 56.9 11 0.00038 31.9 4.4 86 159-267 16-103 (296)
496 4dll_A 2-hydroxy-3-oxopropiona 56.2 18 0.00062 30.9 5.8 89 157-267 30-122 (320)
497 3o26_A Salutaridine reductase; 55.7 28 0.00095 29.0 6.8 77 157-240 11-101 (311)
498 3ado_A Lambda-crystallin; L-gu 55.4 18 0.00062 31.2 5.6 103 157-267 5-121 (319)
499 2h78_A Hibadh, 3-hydroxyisobut 55.1 18 0.00062 30.4 5.5 87 159-267 4-95 (302)
500 3ew7_A LMO0794 protein; Q8Y8U8 55.0 56 0.0019 25.3 8.3 93 160-268 2-101 (221)
No 1
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.93 E-value=6.3e-26 Score=194.93 Aligned_cols=190 Identities=40% Similarity=0.777 Sum_probs=152.7
Q ss_pred ccccccccCCCCCCcccCHHHHHHHHhcCCccchhhhhHHHHHHhhchhcccccccccccCCCccccccccccHHHHHHH
Q 023288 66 SSAMEVSGLDSDGKEFKNAEEMWREQIGEDGEQQEKKTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQML 145 (284)
Q Consensus 66 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 145 (284)
|..+...|.++.|+.|.+.+++|++.+...... ....||....+||+.....++++++++.......... ...+
T Consensus 12 ~~~~~~~g~d~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 85 (254)
T 1xtp_A 12 SRNLPISGRDTNGKTYRSTDEMWKAELTGDLYD--PEKGWYGKALEYWRTVPATVSGVLGGMDHVHDVDIEG----SRNF 85 (254)
T ss_dssp -CCCCCCEEETTSCEESCHHHHHHHHSCSCTTC--TTTCHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHH----HHHH
T ss_pred cccccccccCCCCcccccHHHHHHHHHhccccc--cchhhhhhhhhHHhcCCccccceecCcCccCHHHHHH----HHHH
Confidence 555678899999999999999999987653332 2235888899999999888888887776544333222 2222
Q ss_pred HHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC
Q 023288 146 LSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT 225 (284)
Q Consensus 146 ~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 225 (284)
+. .+. ..++.+|||||||+|.++..++..+..+|+++|+|+.|++.+++++.. ..++++.++|+.+++
T Consensus 86 l~-~l~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 86 IA-SLP---GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG--------MPVGKFILASMETAT 153 (254)
T ss_dssp HH-TST---TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT--------SSEEEEEESCGGGCC
T ss_pred HH-hhc---ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc--------CCceEEEEccHHHCC
Confidence 22 222 456789999999999999999887766799999999999999999865 256899999999888
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+++++||+|++..+++|+++++...+++++.++|||||.+++.+++..
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 201 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCST 201 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC-
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 877899999999999999877889999999999999999999987543
No 2
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.90 E-value=1e-23 Score=180.19 Aligned_cols=164 Identities=45% Similarity=0.907 Sum_probs=130.9
Q ss_pred hhHHHHHHhhchhcccccccccccCCCccccccccccHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCC
Q 023288 102 KTQWYREGISYWEGVEASVDGVLGGFGNVNEVDIKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN 181 (284)
Q Consensus 102 ~~~~~~~~~~yW~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~ 181 (284)
...+|+...+||+.....+++++++|..+...+......++..++..... ..++.+|||||||+|.++..++..+..
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~~ 103 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPN---KTGTSCALDCGAGIGRITKRLLLPLFR 103 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC-------CCCCSEEEEETCTTTHHHHHTTTTTCS
T ss_pred cchhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhccc---CCCCCEEEEECCCCCHHHHHHHHhcCC
Confidence 34688888999999988888888777655544444555555554332211 235789999999999999988877665
Q ss_pred cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCC
Q 023288 182 EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKP 261 (284)
Q Consensus 182 ~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~Lkp 261 (284)
+|+++|+|+.|++.|++++...+ ..+++++++|+.++++++++||+|++..+++|++++++..+++++.++|||
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 177 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEG------KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRP 177 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGG------GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcC------CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCC
Confidence 89999999999999999976521 246889999998888777799999999999999977788999999999999
Q ss_pred CcEEEEEeccCCC
Q 023288 262 GGFFVLKENIARS 274 (284)
Q Consensus 262 GG~lii~e~~~~~ 274 (284)
||.+++.+++...
T Consensus 178 gG~l~i~~~~~~~ 190 (241)
T 2ex4_A 178 NGIIVIKDNMAQE 190 (241)
T ss_dssp EEEEEEEEEEBSS
T ss_pred CeEEEEEEccCCC
Confidence 9999999876544
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.6e-21 Score=168.97 Aligned_cols=113 Identities=14% Similarity=0.267 Sum_probs=98.3
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC---cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN---EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~---~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (284)
.+++.+|||||||+|..+..+++.... +|+|+|+|+.|++.|++++...+. ..+++++++|+.+++++ +|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRDIAIE--NA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTTCCCC--SE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccccccc--cc
Confidence 347889999999999999988875422 799999999999999999876543 45799999999998764 59
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|+|+++.++||+++++...++++++++|||||.|+++|.....
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 9999999999999888889999999999999999999976543
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.83 E-value=2.1e-20 Score=158.61 Aligned_cols=111 Identities=22% Similarity=0.386 Sum_probs=98.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++.... .+|+|+|+|+.|++.|++++... .+++++++|+.+++++ ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCchhccCCC-CCceE
Confidence 45678999999999999999988753 37999999999999999998762 3789999999998877 79999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++..+++|+++++...+++++.++|||||.+++.+....+
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 99999999999777778999999999999999999876544
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.83 E-value=1.2e-20 Score=157.52 Aligned_cols=113 Identities=11% Similarity=-0.011 Sum_probs=92.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCC----C--CCCCcceeEEEcCCCCCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM----A--PDMHKATNFFCVPLQDFTPET 228 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~----~--~~~~~~~~~~~~d~~~~~~~~ 228 (284)
..++.+|||+|||+|..+..+++.++ +|+|+|+|+.|++.|+++....... . .....+++++++|+.++++++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 34678999999999999999998876 6999999999999999986531000 0 000246899999999988664
Q ss_pred -CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 229 -GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 229 -~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++||+|++..+++|++.++...++++++++|||||++++.
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 7899999999999999888888999999999999984443
No 6
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=7.3e-20 Score=153.72 Aligned_cols=106 Identities=25% Similarity=0.280 Sum_probs=93.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++.. .++++.++|+.+++++ ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----------~~~~~~~~d~~~~~~~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----------KEFSITEGDFLSFEVP-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----------TTCCEESCCSSSCCCC-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----------CceEEEeCChhhcCCC-CCeEEEE
Confidence 4678999999999999999887754 69999999999999999875 2478999999998877 8999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+..+++|+++++...+++++.++|||||.+++.+....
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 99999999977756699999999999999999986543
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=3.2e-20 Score=160.01 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=92.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCC-------CCCCC----CCCcceeEEEcCCCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE-------NHMAP----DMHKATNFFCVPLQDF 224 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~-------~~~~~----~~~~~~~~~~~d~~~~ 224 (284)
.++.+|||+|||+|..+..|++.++ +|+|||+|+.|++.|+++.... ...+. ....+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4678999999999999999998877 5999999999999998876410 00000 0025689999999998
Q ss_pred CCCC-CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 225 TPET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 225 ~~~~-~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++++ ++||+|++..+++++++++...+++++.++|||||+|++.
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 8653 7999999999999999888889999999999999999754
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=6.1e-20 Score=152.40 Aligned_cols=104 Identities=20% Similarity=0.330 Sum_probs=93.6
Q ss_pred CceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEec
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~ 237 (284)
+.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++. .+++++++|+.++++++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 67999999999999999987765 6999999999999999984 34889999999988777899999999
Q ss_pred chhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 238 ~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
.+++|++.++...+++++.++|||||.+++.+....
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 999999877889999999999999999999876443
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.82 E-value=2.2e-20 Score=161.45 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=86.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+.+|||||||+|.++..++..+ .+|+|+|+|+.|++.|++ ..++++.+++++++++++++||+|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhcccCCcccEEEE
Confidence 45789999999999999887554 579999999999987753 24689999999999999999999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
..++||++. ..+++++.|+|||||+|++....
T Consensus 106 ~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 106 AQAMHWFDL---DRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp CSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeehhHhhH---HHHHHHHHHHcCCCCEEEEEECC
Confidence 999999863 37999999999999999998653
No 10
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.81 E-value=2.4e-19 Score=156.80 Aligned_cols=111 Identities=17% Similarity=0.202 Sum_probs=96.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++...+. ..++++..+|+.+++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECChhhCC---CCeeEE
Confidence 567789999999999999998855445899999999999999999876543 357899999998765 789999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
++..+++|+++++...+++++.++|||||.+++.+....
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 999999999766888999999999999999999886543
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.81 E-value=1.7e-19 Score=158.60 Aligned_cols=112 Identities=20% Similarity=0.265 Sum_probs=97.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....++ ..++++.++|+.++++++++||+|
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEEcCcccCCCCCCCEeEE
Confidence 457789999999999999999877444799999999999999998754433 356899999999998888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
++..+++|++ +...+++++.++|||||.+++.+....
T Consensus 155 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 155 WSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 9999999998 567999999999999999999986544
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.81 E-value=2.2e-19 Score=155.83 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=98.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++...++ ..++++.++|+.++++++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL-----ANRVTFSYADAMDLPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECccccCCCCCCCccEE
Confidence 457789999999999999999876656899999999999999998765443 346899999999988888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
++..+++|++ +...+++++.++|||||.+++.+....
T Consensus 134 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 134 WALESLHHMP--DRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp EEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred EEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 9999999998 556999999999999999999986543
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.81 E-value=2.6e-19 Score=154.27 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=99.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++.....+|+|+|+|+.|++.++++... ..++++.++|+.++++++++||+|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG--------NNKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS--------CTTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc--------CCCeEEEECccccCCCCCCcEEEE
Confidence 567789999999999999999887445799999999999999998765 256899999999998888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..+++|++.++...+++++.++|||||.+++.+.....
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999997778999999999999999999999865443
No 14
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.80 E-value=1.8e-19 Score=155.49 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=95.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++++...+. .++++.++|+.++++++++||+|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecHHhCCCCCCCEEEE
Confidence 45778999999999999998886665 799999999999999998765432 46899999999998888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+++.+++|++ +...+++++.++|||||+|++.+...+
T Consensus 108 ~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 108 TCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred EEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 9999999998 666999999999999999999876543
No 15
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=5.4e-19 Score=148.38 Aligned_cols=114 Identities=20% Similarity=0.135 Sum_probs=96.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++...++... ...++++.++|+...+.+.++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRN-QWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHH-HHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcc-cCcceEEEeCCcccccccCCCcCEE
Confidence 4667999999999999999887655 3899999999999999999876543100 0126899999998777666799999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+++|++++++..+++++.++|||||.++++.+
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 999999999988888999999999999998888765
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.80 E-value=1.8e-19 Score=153.42 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=92.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..++..+. +|+|+|+|+.+++.++++.. ..+++++++|+.++++++++||+|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---------GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---------BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---------cCCceEEEcchhcCCCCCCCccEEEE
Confidence 677999999999999999987755 69999999999999998853 35689999999999887889999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
..+++|++ +...+++++.++|+|||.+++.+..
T Consensus 123 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 123 INSLEWTE--EPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp ESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 99999998 6669999999999999999998753
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.79 E-value=6.2e-19 Score=155.54 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=96.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..++++.++|+.++ +++||+|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGWEEF---DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCGGGC---CCCCSEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCHHHc---CCCccEE
Confidence 567889999999999999999887446799999999999999999876544 34789999999876 5799999
Q ss_pred EecchhccCCh-------hhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~-------~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
++..+++|+++ +++..+++++.++|||||.+++.+....
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 99999999943 5678999999999999999999887544
No 18
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.79 E-value=5.6e-19 Score=151.61 Aligned_cols=104 Identities=17% Similarity=0.252 Sum_probs=94.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.++++... .++++.++|+.++++++++||+|
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTS---------PVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCC---------TTEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhcc---------CCeEEEEcchhhCCCCCCCeEEE
Confidence 447789999999999999999888775899999999999999999762 46899999999988878899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
++..+++|++ +...+++++.++|||||.+++..
T Consensus 113 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 113 LSSLALHYIA--SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEe
Confidence 9999999997 67799999999999999999974
No 19
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=6.7e-19 Score=147.25 Aligned_cols=107 Identities=21% Similarity=0.314 Sum_probs=93.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.+++.. ..++++.++|+.++ +++++||+|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~----------~~~~~~~~~d~~~~-~~~~~~D~v 111 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRHG----------LDNVEFRQQDLFDW-TPDRQWDAV 111 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGGC----------CTTEEEEECCTTSC-CCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhcC----------CCCeEEEecccccC-CCCCceeEE
Confidence 34567999999999999999988755 6999999999999999821 25689999999988 667899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+++.+++|++++++..+++++.++|||||.+++.+....
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 999999999987788999999999999999999987553
No 20
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.79 E-value=8.9e-19 Score=155.55 Aligned_cols=112 Identities=18% Similarity=0.237 Sum_probs=97.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....++ ..++++.++|+.+++ ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECChHHCC---CCcCEE
Confidence 567789999999999999999877334799999999999999999876543 346899999998764 689999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..+++|+++++...+++++.++|||||.+++.+....+
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9999999998778899999999999999999999876543
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.79 E-value=5.3e-19 Score=151.84 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=95.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++.....+|+|+|+|+.|++.|++++...++ ..++++.++|+.++++ +++||+|
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECChHhCCc-CCCCCEE
Confidence 457789999999999999999877655799999999999999998865443 3479999999999877 6899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|++ +...+++++.++|||||.+++.+..
T Consensus 108 ~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 108 ACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp EEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred EECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecCc
Confidence 9999999998 5669999999999999999998754
No 22
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.79 E-value=7.2e-19 Score=147.70 Aligned_cols=115 Identities=20% Similarity=0.173 Sum_probs=95.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|++++...++... ...++++.++|+...+.++++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEM-QRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHH-HHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccc-cCcceEEEeCcccccccccCCCCEE
Confidence 4567999999999999998886654 3899999999999999999865432100 0016899999998777667899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|++++++..+++++.++|||||.+++..+.
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 9999999999888889999999999999987777653
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.78 E-value=9.6e-19 Score=150.30 Aligned_cols=109 Identities=18% Similarity=0.221 Sum_probs=96.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.+++++...++ ..+++++++|+.++++++++||+|
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v 118 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC-----ADRVKGITGSMDNLPFQNEELDLI 118 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCCCCCCEEEE
Confidence 456789999999999999999988765899999999999999999876554 345899999999988888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 119 WSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEee
Confidence 9999999983 458999999999999999999853
No 24
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=8.8e-19 Score=146.77 Aligned_cols=106 Identities=16% Similarity=0.237 Sum_probs=92.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++... ..+++++++|+.+++ ++++||+|
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~~d~~~~~-~~~~fD~v 118 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKR--------WSHISWAATDILQFS-TAELFDLI 118 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTT--------CSSEEEEECCTTTCC-CSCCEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhccc--------CCCeEEEEcchhhCC-CCCCccEE
Confidence 45678999999999999998886654 699999999999999999876 247899999999987 56899999
Q ss_pred EecchhccCCh-hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~-~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+++.+++|+++ +++..+++++.++|||||.+++...
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99999999985 4567889999999999999999753
No 25
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.78 E-value=1.8e-18 Score=144.13 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=94.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++... ..++++.++|+.++++++++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--------~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--------VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--------CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--------CCCcEEEEcchhcCCCCCCcccEEE
Confidence 46789999999999999999887765799999999999999999764 2468899999999887778999999
Q ss_pred ecchhccCC-------------hhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLT-------------DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~-------------~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+..+++++. ..+...+++++.++|||||.+++.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 999998765 446789999999999999999998764
No 26
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.78 E-value=4.5e-19 Score=148.16 Aligned_cols=107 Identities=19% Similarity=0.182 Sum_probs=94.0
Q ss_pred ceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEecc
Q 023288 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQW 238 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~~ 238 (284)
.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...+. ..++++.++|+.++++++++||+|++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL-----NDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc-----cCceEEEEcCHHHCCCCcccccEEEECc
Confidence 39999999999999999877333799999999999999999766443 3478999999999888888999999999
Q ss_pred hhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 239 CIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 239 ~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+++|++ +...+++++.++|||||.+++.+...
T Consensus 120 ~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 120 SVFFWE--DVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp CGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 999997 67799999999999999999987543
No 27
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.78 E-value=8.2e-19 Score=152.48 Aligned_cols=121 Identities=26% Similarity=0.295 Sum_probs=100.9
Q ss_pred HHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE
Q 023288 140 AFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (284)
Q Consensus 140 ~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~ 218 (284)
..+...+..... ..++.+|||||||+|.++..++..++ .+|+++|+|+.+++.+++++...+. .++++.+
T Consensus 23 ~~l~~~l~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~ 93 (276)
T 3mgg_A 23 ETLEKLLHHDTV---YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI------KNVKFLQ 93 (276)
T ss_dssp CHHHHHHHTTCC---CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEE
T ss_pred HHHHHHHhhccc---CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEE
Confidence 344444443332 45788999999999999999988753 3799999999999999998765432 4689999
Q ss_pred cCCCCCCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 219 VPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 219 ~d~~~~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
.|+.++++++++||+|+++.+++|++ +...+++++.++|||||++++.+..
T Consensus 94 ~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 94 ANIFSLPFEDSSFDHIFVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp CCGGGCCSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccCCCCCCCeeEEEEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 99999888888999999999999998 5559999999999999999998753
No 28
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.77 E-value=1.2e-18 Score=145.44 Aligned_cols=102 Identities=23% Similarity=0.406 Sum_probs=90.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++.. +.+.++|+.+++ .+++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~------------~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRLG------------RPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHT------------SCCEECCGGGCC-CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhcC------------CceEEeeeccCC-CCCcEEEEE
Confidence 4678999999999999999887755 69999999999999999862 457788888877 668999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+..+++|++.++...+++++.++|||||.+++....
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999999999888899999999999999999998543
No 29
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.77 E-value=1.8e-18 Score=149.82 Aligned_cols=109 Identities=20% Similarity=0.247 Sum_probs=95.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++.....+|+|+|+|+.|++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIVGSMDDLPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEEcChhhCCCCCCCEEEE
Confidence 457889999999999999988877444899999999999999999876544 356999999999988878899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|+. ...+++++.++|||||.+++.+..
T Consensus 119 ~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 119 WSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999999983 458999999999999999999864
No 30
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.77 E-value=7.4e-19 Score=149.93 Aligned_cols=111 Identities=16% Similarity=0.203 Sum_probs=96.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+. +|+++|+|+.|++.+++++...+. .++++.++|+.++++++++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGV------ENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTC------CSEEEEECBTTBCCSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCC------CCeEEEecccccCCCCCCcEEEE
Confidence 56788999999999999998886654 799999999999999998754332 46889999999988888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..+++|++ +...+++++.++|||||.+++.+...+.
T Consensus 92 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 129 (239)
T 1xxl_A 92 TCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYAPE 129 (239)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred EECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 9999999998 6679999999999999999999876543
No 31
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.77 E-value=1.3e-18 Score=148.15 Aligned_cols=101 Identities=23% Similarity=0.273 Sum_probs=89.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++... +++++++|+.++ +++++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~~~~-~~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----------GITYIHSRFEDA-QLPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----------CEEEEESCGGGC-CCSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----------CeEEEEccHHHc-CcCCcccEEEE
Confidence 567899999999999998886665 699999999999999998642 588999999887 45679999999
Q ss_pred cchhccCChhhHHHHHHHHH-hcCCCCcEEEEEecc
Q 023288 237 QWCIGHLTDDDFVSFFKRAK-VGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~-r~LkpGG~lii~e~~ 271 (284)
..+++|++ +...+++++. ++|||||.+++.+..
T Consensus 110 ~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 110 THVLEHID--DPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp ESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 99999998 5569999999 999999999998754
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.77 E-value=7.3e-19 Score=153.70 Aligned_cols=106 Identities=23% Similarity=0.290 Sum_probs=93.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~Iv 235 (284)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++++...++ ..+++++++|+.+++ +.+++||+|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHHHhhhhcCCCceEEE
Confidence 467999999999999999887754 699999999999999999876543 367999999999887 6678999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+..+++|++ +...+++++.++|||||.+++.+.
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999999998 566999999999999999999864
No 33
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=8.7e-19 Score=149.70 Aligned_cols=110 Identities=16% Similarity=0.032 Sum_probs=95.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-----C
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~ 229 (284)
..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++... .+++++++|+.+++... .
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc---------cCceEEECccccccccccccccc
Confidence 45678999999999999999998777 699999999999999998743 46899999998865321 2
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
.||+|++..++||+++++...+++++.++|||||.+++.+....+
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 499999999999999888899999999999999999999876544
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.77 E-value=2.1e-18 Score=144.68 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=97.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++..+ . .+|+|+|+|+.+++.+++++...+. .++++.++|+.++++++++||
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTTBCSSCSSCEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccccCCCCCCCee
Confidence 4567899999999999999998876 2 3799999999999999998765332 368999999999888888999
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
+|++..+++|++ +...+++++.++|||||.+++.+.....
T Consensus 109 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 109 FIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 999999999998 6679999999999999999999865443
No 35
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=3.7e-19 Score=151.82 Aligned_cols=105 Identities=18% Similarity=0.125 Sum_probs=86.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (284)
.++.+|||||||+|..+..+++..+.++++||+|+.|++.|+++.... ..++.++.+|+.+. .+++++||.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~-------~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhC-------CCceEEEeehHHhhcccccccCCce
Confidence 478899999999999999887665668999999999999999998764 34677888887654 356788999
Q ss_pred EEe-----cchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWV-----QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~-----~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+. ...++|++ +...++++++|+|||||+|++.+
T Consensus 132 i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEEEe
Confidence 974 45666766 67799999999999999998854
No 36
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=2e-18 Score=143.60 Aligned_cols=111 Identities=17% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|..+..++.....+|+|+|+|+.|++.++++.... ..++++.++|+.++++++++||+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------NFKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-------TCCCCEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEECchhhCCCCCCceeEEE
Confidence 457899999999999854444444447999999999999999886532 2357899999999888778999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+..+++|++.++...+++++.++|||||.+++.+....
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 99999999877889999999999999999999986543
No 37
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=2.7e-18 Score=141.54 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=94.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++++...+. .++++.++|+.++++ +++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGGGCCC-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchhhCCC-CCCceEEE
Confidence 3567999999999999998887754 699999999999999998754321 358899999998877 68999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+..+++|+++++...+++++.++|||||.+++.+...
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 9999999998888999999999999999998876543
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=1e-18 Score=150.88 Aligned_cols=104 Identities=21% Similarity=0.292 Sum_probs=90.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++.. +++++++|+.++++ +++||+|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----------CCEEEECChHHCCc-cCCcCEEEE
Confidence 568999999999999998886654 69999999999999999864 47899999999877 579999999
Q ss_pred cc-hhccCCh-hhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 237 QW-CIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 237 ~~-~l~~~~~-~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
.. +++|++. ++...+++++.++|||||.|++.+...+
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 98 9999964 5678999999999999999999754433
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.76 E-value=2.4e-18 Score=146.36 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=92.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++..+..+|+|+|+|+.|++.++++... .++++.++|+.++++++++||+|
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~~fD~v 111 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---------TGITYERADLDKLHLPQDSFDLA 111 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGGGCCCCTTCEEEE
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChhhccCCCCCceEE
Confidence 346789999999999999988877654799999999999999998754 35889999999888777899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+++|++ +...+++++.++|||||.+++...
T Consensus 112 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 112 YSSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 9999999998 677999999999999999999763
No 40
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=7.8e-19 Score=149.49 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=88.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (284)
.++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++.... ..+++++++|+.++ ++++++||+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-------THKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-------SSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEecCHHHhhcccCCCceEE
Confidence 467899999999999999886545548999999999999999987653 24689999999887 777789999
Q ss_pred EEe-cchh--ccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWV-QWCI--GHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~-~~~l--~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|++ .+.+ +.....+...+++++.++|||||+|++.+.
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 999 5543 233333566889999999999999998753
No 41
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=3e-18 Score=150.16 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=95.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~I 234 (284)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++....+. ..++++.++|+.+.++ ++++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCccccccCCCCCcCEE
Confidence 46789999999999999988877665899999999999999999876433 2468999999998876 57899999
Q ss_pred Eecchhcc--CChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGH--LTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~--~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..++|| .+.++...+++++.++|||||.+++...
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999998 5566788999999999999999999864
No 42
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=3.2e-18 Score=145.92 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=89.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--CCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD 232 (284)
..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++ +++.++|+.++ ++++++||
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------------~~~~~~d~~~~~~~~~~~~fD 103 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------------FNVVKSDAIEYLKSLPDKYLD 103 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------------SEEECSCHHHHHHTSCTTCBS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------------cceeeccHHHHhhhcCCCCee
Confidence 34678999999999999998887766 599999999999999875 45777887765 56678999
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+|++..+++|++++++..+++++.++|||||.+++.....
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 9999999999998888999999999999999999986543
No 43
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.76 E-value=2.8e-18 Score=145.69 Aligned_cols=108 Identities=18% Similarity=0.068 Sum_probs=93.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++....+. ..++++.++|+.+++.. ++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDVFTWRPT-ELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCTTTCCCS-SCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECchhcCCCC-CCeeEEEE
Confidence 346999999999999998875444 699999999999999999876322 35799999999997744 59999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
..+++|+++++...+++++.++|||||.+++.+..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 99999999888899999999999999999998754
No 44
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=6.9e-18 Score=140.76 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=88.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..+ +..+++|+|+|+.|++.++++. .++++.++|+.++++++++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 6789999999999999876 4437999999999999999986 2378899999998888889999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
..+++|++ +...+++++.++|||||.+++.+...
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 102 FTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp ESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999998 66799999999999999999987543
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.75 E-value=3.4e-18 Score=151.56 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=97.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..+++....+|+|+|+|+.|++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhcCCCCCCCEeEE
Confidence 457789999999999999999877444799999999999999999876544 347999999999988888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..+++|++ ...+++++.++|||||.+++.+.+..+
T Consensus 190 ~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 190 WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 9999999995 568999999999999999999865443
No 46
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.75 E-value=2e-18 Score=148.53 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=91.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.+++++... ..++++.++|+.++++++++||+|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~v 108 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGV-------DRKVQVVQADARAIPLPDESVHGV 108 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTS-------CTTEEEEESCTTSCCSCTTCEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhcc-------CCceEEEEcccccCCCCCCCeeEE
Confidence 4567899999999999999888664 46999999999999999997221 357899999999988878899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++..++||++ +...+++++.++|||||.+++.
T Consensus 109 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999998 6679999999999999999987
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=8e-18 Score=141.64 Aligned_cols=107 Identities=21% Similarity=0.235 Sum_probs=92.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+. +++++|+|+.+++.|+++.... ..+++++++|+.++++++++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR-------ESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCCceEEECchhcCCCCCCcEEEEEE
Confidence 478999999999999998887665 7999999999999999987542 24588999999998877789999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+.++++...++...+++++.++|||||.+++.+..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99976666667889999999999999999998653
No 48
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.75 E-value=3.1e-18 Score=147.87 Aligned_cols=107 Identities=12% Similarity=0.056 Sum_probs=84.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++++. +|+|+|+|+.|++.|+++.... ....++...+.......+++||+|
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 55778999999999999999987765 6999999999999999998652 112223222220011114689999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+++.+++|++.++...+++++.++| |||.++++..
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999999999888899999999999 9999999854
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.75 E-value=1.1e-17 Score=146.43 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=94.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++... ..++++.++|+.+++++ ++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~~v~~~~~d~~~~~~~-~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-------PYDSEFLEGDATEIELN-DKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-------SSEEEEEESCTTTCCCS-SCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-------CCceEEEEcchhhcCcC-CCee
Confidence 45778999999999999998886643 37999999999999999997653 23799999999998875 6999
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|++..+++|++ +...+++++.++|||||++++.+..
T Consensus 92 ~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999999999998 6669999999999999999998864
No 50
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.75 E-value=2.3e-18 Score=149.20 Aligned_cols=133 Identities=16% Similarity=0.076 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCC--CCCC--------
Q 023288 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--HMAP-------- 208 (284)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~--~~~~-------- 208 (284)
..++...+...+.. ...++.+|||||||+|.++..++..++.+|+|+|+|+.|++.|++++.... ....
T Consensus 38 ~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 38 LKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp HHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 34554455444421 245678999999999988876666666679999999999999998764421 0000
Q ss_pred ---C----------CCccee-EEEcCCCCC-CC---CCCceeEEEecchhccCC--hhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 209 ---D----------MHKATN-FFCVPLQDF-TP---ETGRYDVIWVQWCIGHLT--DDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 209 ---~----------~~~~~~-~~~~d~~~~-~~---~~~~fD~Iv~~~~l~~~~--~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
. ...++. +.++|+.+. ++ ..++||+|++++++||+. .+++..++++++++|||||.|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 0 001233 888999874 32 246899999999999863 357789999999999999999999
Q ss_pred eccC
Q 023288 269 ENIA 272 (284)
Q Consensus 269 e~~~ 272 (284)
+...
T Consensus 197 ~~~~ 200 (263)
T 2a14_A 197 VTLR 200 (263)
T ss_dssp EESS
T ss_pred Eeec
Confidence 7543
No 51
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=4.3e-18 Score=147.10 Aligned_cols=101 Identities=18% Similarity=0.144 Sum_probs=88.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++. ++++.++|+.++++++++||+|
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------------~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------------QVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------------TEEEECCCTTSCCSCTTCBSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------------CCEEEECchhhCCCCCCCEeEE
Confidence 45778999999999999998886544 6999999999999776542 5899999999998888899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|++ +...+++++.++|| ||++++.+..
T Consensus 99 ~~~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 99 ISILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred EEcchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9999999997 77799999999999 9988888754
No 52
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.74 E-value=2.2e-17 Score=139.45 Aligned_cols=115 Identities=18% Similarity=0.198 Sum_probs=97.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....+.... ...++++.+.|+..+++++++||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQK-TGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSS-SSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccc-cCcceEEEEecccccCCCCCceeEEE
Confidence 3678999999999999999987755 699999999999999999877544211 12368999999999888788999999
Q ss_pred ecchhccCCh-hhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 236 VQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 236 ~~~~l~~~~~-~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+..+++|+++ ++...+++++.++|||||.+++.+...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9999999974 335589999999999999999987643
No 53
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.74 E-value=7.6e-18 Score=147.25 Aligned_cols=107 Identities=19% Similarity=0.196 Sum_probs=94.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.+++++...+ .++++.++|+.+++. +++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKEN-------LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcC-------CceEEEEeccccccc-cCCccEEEE
Confidence 678999999999999999987766 69999999999999999876542 268999999998776 679999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+.+++|+++++...+++++.++|||||.+++.....
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999999998889999999999999999988875543
No 54
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.73 E-value=6.3e-18 Score=143.41 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=89.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++.. ++++.++|+.+++. +++||+|+|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP-----------DATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT-----------TCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC-----------CCEEEECCHHHccc-CCCCcEEEE
Confidence 567999999999999999987766 69999999999999999853 37899999998876 579999995
Q ss_pred -cchhccCCh-hhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 237 -QWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 237 -~~~l~~~~~-~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
..+++|+++ ++...+++++.++|||||.+++.+...+
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 459999954 5788999999999999999999865443
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.73 E-value=3.5e-18 Score=155.92 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=94.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCC-----C-CCCCCCCcceeEEEcCCCCC--
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPE-----N-HMAPDMHKATNFFCVPLQDF-- 224 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~-----~-~~~~~~~~~~~~~~~d~~~~-- 224 (284)
..++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++... | + ...+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~----~~~~v~~~~~d~~~l~~ 156 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSP----SRSNVRFLKGFIENLAT 156 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSST----TCCCEEEEESCTTCGGG
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhccccc----CCCceEEEEccHHHhhh
Confidence 34678999999999999998887642 27999999999999999886421 0 0 025789999999987
Q ss_pred ----CCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 225 ----TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 225 ----~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
++++++||+|+++.+++|++ +...+++++.++|||||+|++.+...
T Consensus 157 ~~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 157 AEPEGVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CBSCCCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccCCCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 77788999999999999998 66799999999999999999987543
No 56
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=2.9e-17 Score=141.06 Aligned_cols=102 Identities=22% Similarity=0.329 Sum_probs=90.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++... ..+|+++|+|+.|++.++++. .++++.++|+.+++ ++++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------CCcEEEECChhhcC-ccCCcCE
Confidence 4567899999999999999988773 236999999999999999883 35789999999887 6689999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+++.+++|++ +...+++++.++|||||.+++.+.
T Consensus 99 v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 99 LYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999999998 677999999999999999999874
No 57
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.5e-17 Score=146.48 Aligned_cols=105 Identities=19% Similarity=0.241 Sum_probs=90.7
Q ss_pred CCCceEEEeeccccHHHHHHHHh--CCCcEEEEeCCHHHHHHHHHHcCCC-CCCCCCCCcceeEEEcCCCCCCCCC----
Q 023288 156 NQHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPET---- 228 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~--~~~~v~gvD~S~~~l~~ar~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~---- 228 (284)
.++.+|||||||+|..+..++.. ...+|+|+|+|+.|++.|++++... +. ..+++++++|+.++++++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-----YKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-----CTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-----CCceEEEEcCHHhCCccccccc
Confidence 46789999999999999999864 3458999999999999999987542 11 357999999999988666
Q ss_pred --CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 229 --GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 229 --~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++||+|+++.++||+ +...+++++.++|||||.|++.
T Consensus 110 ~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp TSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 799999999999999 5569999999999999999994
No 58
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.72 E-value=4.7e-18 Score=150.18 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=85.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC------C--CCCC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD------F--TPET 228 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~------~--~~~~ 228 (284)
++.+|||||||+|..+..++..+..+|+|+|+|+.||+.|+++....+........+++|.+.|+.. + ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4679999999999877667766666799999999999999998754221000000135677887722 2 2345
Q ss_pred CceeEEEecchhccC-ChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 229 GRYDVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~-~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++||+|+|..++||+ ..++...++++++++|||||.|+++..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 799999999999986 334677999999999999999999754
No 59
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.72 E-value=5.9e-17 Score=146.71 Aligned_cols=111 Identities=14% Similarity=0.218 Sum_probs=97.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (284)
...+|||||||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+.+. +++ ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEccccccCCCCC-CCcCE
Confidence 5679999999999999999987654 7999999 9999999999877544 35799999999886 344 68999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++..++|++++++...++++++++|||||+|++.|.+.++
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 99999999999888889999999999999999999976654
No 60
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=2.3e-17 Score=143.70 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=89.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++. .++++.++|+.++++ +++||+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----------PHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----------TTSCEEECCTTTCCC-SSCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----------CCCEEEECChhhCCc-CCCcCEE
Confidence 34678999999999999999887444 6999999999999999885 247799999999887 4799999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
++..+++|++ +...+++++.++|||||++++.....
T Consensus 122 ~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 122 FSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9999999998 66699999999999999999986543
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.72 E-value=1.6e-17 Score=137.55 Aligned_cols=105 Identities=24% Similarity=0.240 Sum_probs=89.2
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++ +|||+|||+|.++..++..+. +|+++|+|+.|++.++++....+ .++++.++|+.++++++++||+|++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKG-------VKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHT-------CCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcC-------CceEEEEcChhhcCCCcCCccEEEE
Confidence 45 999999999999998886654 69999999999999999875421 2588999999998877789999998
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+ +.|++.++...+++++.++|||||.+++.+...
T Consensus 101 ~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 101 I--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp E--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred E--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 5 456676788899999999999999999987643
No 62
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.72 E-value=8.3e-18 Score=147.35 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=92.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---CCCCcee
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETGRYD 232 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD 232 (284)
.++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++....+.. ....++.+..+|+.+++ +++++||
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKE--PAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccc--cccceeeEeecChhhCccccccCCCeE
Confidence 4668999999999999999987766 6999999999999999875221110 00245778889988776 6678999
Q ss_pred EEEec-chhccCCh-----hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQ-WCIGHLTD-----DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~-~~l~~~~~-----~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++. .+++|+++ ++...+++++.++|||||++++...
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99998 89999996 4588999999999999999999753
No 63
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.72 E-value=1.4e-17 Score=134.22 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=89.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++. .++++...| .++++++||+|
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF-----------DSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC-----------TTSEEESSG---GGSCTTCEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---CCCCCCceEEE
Confidence 45678999999999999998887665 7999999999999999982 357888888 55667899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..+++|++ +...+++++.++|||||.+++.+.....
T Consensus 80 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 80 LFANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 9999999998 6679999999999999999999865543
No 64
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.72 E-value=1.7e-17 Score=145.84 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=90.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCC-----------------------------
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHM----------------------------- 206 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~----------------------------- 206 (284)
++.+|||||||+|.++..++.... .+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999988743 48999999999999999987653311
Q ss_pred -----------------------CCCCCcceeEEEcCCCCCC-----CCCCceeEEEecchhccC----ChhhHHHHHHH
Q 023288 207 -----------------------APDMHKATNFFCVPLQDFT-----PETGRYDVIWVQWCIGHL----TDDDFVSFFKR 254 (284)
Q Consensus 207 -----------------------~~~~~~~~~~~~~d~~~~~-----~~~~~fD~Iv~~~~l~~~----~~~~~~~~l~~ 254 (284)
...+..+++|.++|+.... +.+++||+|+|..+++|+ .++++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0111257999999998654 456899999999999887 66678899999
Q ss_pred HHhcCCCCcEEEEEe
Q 023288 255 AKVGLKPGGFFVLKE 269 (284)
Q Consensus 255 ~~r~LkpGG~lii~e 269 (284)
++++|||||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999953
No 65
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.72 E-value=1.5e-17 Score=146.12 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=82.0
Q ss_pred CCCceEEEeeccccHHHHHH----HHhCCC-c--EEEEeCCHHHHHHHHHHcCCC-CCCCCCCCcceeEEEcCCCCCC--
Q 023288 156 NQHLVALDCGSGIGRITKNL----LIRYFN-E--VDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFT-- 225 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l----~~~~~~-~--v~gvD~S~~~l~~ar~~~~~~-~~~~~~~~~~~~~~~~d~~~~~-- 225 (284)
.++.+|||||||+|.++..+ +..+.. . ++|+|+|+.|++.|++++... +.. ..+..+...++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~----~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLE----NVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCT----TEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCC----cceEEEEecchhhhhhh
Confidence 46779999999999876543 333332 2 399999999999999987532 110 112344455554432
Q ss_pred ----CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 226 ----~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+++++||+|++..++||++ ++..++++++++|||||++++.+..
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4568999999999999999 6679999999999999999998653
No 66
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.71 E-value=9.7e-17 Score=139.85 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=90.1
Q ss_pred CCceEEEeeccc---cHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 157 QHLVALDCGSGI---GRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 157 ~~~~VLDiGcGt---G~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
...+|||||||+ |.++..+.+... .+|+++|+|+.|++.|++++.. ..+++++++|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--------CCCeEEEEeeCCCchhhhccch
Confidence 346999999999 988876555433 3799999999999999999854 356899999997631
Q ss_pred ----CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 226 ----PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 226 ----~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
++..+||+|+++.++||+++++...+++++.++|+|||+|++.+...
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22248999999999999997778899999999999999999998764
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.71 E-value=4.1e-17 Score=143.63 Aligned_cols=110 Identities=25% Similarity=0.355 Sum_probs=92.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|++++...+. ....+++++++|+.++++ +++||+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPA---DVRDRCTLVQGDMSAFAL-DKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCH---HHHTTEEEEECBTTBCCC-SCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhccc---ccccceEEEeCchhcCCc-CCCcCEEEE
Confidence 345999999999999999887755 599999999999999999865321 001468999999999887 579999986
Q ss_pred c-chhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 237 Q-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 237 ~-~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
. .+++|+++++...+++++.++|||||.|++....
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 5 6788888778899999999999999999998643
No 68
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.71 E-value=1.4e-17 Score=141.62 Aligned_cols=103 Identities=20% Similarity=0.365 Sum_probs=89.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+. +++|+|+|+.|++.++++....+ .++++.++|+.+++++ ++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQG-------LKPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTT-------CCCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcC-------CCeEEEecccccCCcc-CCceEEEE
Confidence 668999999999999998887654 69999999999999999875432 2588999999888766 79999999
Q ss_pred cc-hhccCC-hhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QW-CIGHLT-DDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~-~l~~~~-~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.. +++|++ .++...+++++.++|||||.+++.
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 98 999994 357889999999999999999985
No 69
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=3e-17 Score=134.14 Aligned_cols=110 Identities=11% Similarity=0.017 Sum_probs=84.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++...++ .++++++.+...+. +.+++||+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~~~~~l~~~~~~~fD~ 92 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI------ENTELILDGHENLDHYVREPIRA 92 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEESCGGGGGGTCCSCEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCcHHHHHhhccCCcCE
Confidence 346789999999999999988866 55799999999999999999865432 46888888777643 33578999
Q ss_pred EEecchhccC-------ChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 234 IWVQWCIGHL-------TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 234 Iv~~~~l~~~-------~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+++....+. ..++...+++++.++|||||.+++....
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 93 AIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 9987432221 2245668899999999999999998653
No 70
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.71 E-value=4e-17 Score=144.21 Aligned_cols=112 Identities=16% Similarity=0.031 Sum_probs=94.2
Q ss_pred CCCCceEEEeeccccHHHHHHH-HhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLL-IRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~-~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||||||+|..+..++ ... ..+|+|+|+|+.+++.|++++...+. ..+++++++|+.+++++ ++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWKLDTR-EGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGGCCCC-SCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhcCCcc-CCeE
Confidence 3567899999999999999874 222 23799999999999999999987654 34699999999998877 8999
Q ss_pred EEEecchhccCChhh-HHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 233 VIWVQWCIGHLTDDD-FVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~-~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+|+++.+++|+++.+ ...+++++.++|||||.+++.+...
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 190 LLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 999999999997443 4458999999999999999987654
No 71
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=1.8e-17 Score=142.04 Aligned_cols=118 Identities=22% Similarity=0.311 Sum_probs=94.8
Q ss_pred HHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE
Q 023288 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (284)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~ 218 (284)
..++...+.... ..++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++....+ .++++++
T Consensus 27 ~~~~~~~~~~~~----~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~-------~~v~~~~ 94 (252)
T 1wzn_A 27 IDFVEEIFKEDA----KREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERN-------LKIEFLQ 94 (252)
T ss_dssp HHHHHHHHHHTC----SSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-------CCCEEEE
T ss_pred HHHHHHHHHHhc----ccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcC-------CceEEEE
Confidence 345555554321 34567999999999999999887755 69999999999999999875432 3588999
Q ss_pred cCCCCCCCCCCceeEEEec-chhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 219 VPLQDFTPETGRYDVIWVQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 219 ~d~~~~~~~~~~fD~Iv~~-~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|+.+++++ ++||+|++. ..+++++.++...+++++.++|||||.+++.-
T Consensus 95 ~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 95 GDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999887765 689999987 45677777788999999999999999998753
No 72
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.70 E-value=1.2e-16 Score=142.80 Aligned_cols=113 Identities=14% Similarity=0.090 Sum_probs=95.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..+..+|||||||+|..+..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+. .+.+. +||+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~-~~~p~-~~D~ 238 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFF-DPLPA-GAGG 238 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTT-SCCCC-SCSE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCC-CCCCC-CCcE
Confidence 345679999999999999999987655 7999999 9999999998765443 357999999997 34443 8999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~ 275 (284)
|++.+++||+++++...++++++++|+|||++++.|.+.++.
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC--
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC
Confidence 999999999998878899999999999999999999876543
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=1.4e-16 Score=130.41 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=91.2
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +++++|+|+.+++.++++.. ++++.+.|+.++++++++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTTSCCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC-----------CCcEEEcccccCCCCCCceeEEE
Confidence 3678999999999999998887754 69999999999999999863 37889999998877778999999
Q ss_pred ec-chhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 236 VQ-WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~-~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+. .+++|++.++...+++++.++|+|||.+++...
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 98 789999877888999999999999999999754
No 74
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=8.9e-17 Score=138.66 Aligned_cols=100 Identities=23% Similarity=0.322 Sum_probs=85.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++... .+.++|+.++++++++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~------------~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK------------NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS------------CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC------------CEEECcHHHCCCCCCCEEEEEE
Confidence 567999999999999998886654 699999999999999998641 2788999998887889999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
..+++|+.. +...+++++.++|||||.+++...
T Consensus 121 ~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 121 LGDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhccc-cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 887666532 477999999999999999999753
No 75
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.69 E-value=3e-17 Score=141.35 Aligned_cols=117 Identities=18% Similarity=0.227 Sum_probs=91.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCC---------------CCC--------CC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM---------------APD--------MH 211 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~---------------~~~--------~~ 211 (284)
..++.+|||+|||+|.++..++..++.+|+|+|+|+.|++.+++++...+.. ... ..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3467899999999999999877666647999999999999999988653100 000 00
Q ss_pred cce-eEEEcCCCCCCC-CC---CceeEEEecchhccCChh--hHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 212 KAT-NFFCVPLQDFTP-ET---GRYDVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 212 ~~~-~~~~~d~~~~~~-~~---~~fD~Iv~~~~l~~~~~~--~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
.++ ++.++|+.+..+ ++ ++||+|++..++++++.. +...+++++.++|||||.|++.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 126 899999988643 44 799999999999955432 7789999999999999999998743
No 76
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.68 E-value=5.8e-17 Score=137.75 Aligned_cols=102 Identities=22% Similarity=0.274 Sum_probs=87.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++.. .+|+|+|+|+.|++.|+++.... ..++++.++|+.+++++ ++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET-------NRHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT-------TCCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc-------CCceEEEEcChhhcCCC-CCcCEEEE
Confidence 4579999999999999988755 57999999999999999987542 23588999999888765 78999999
Q ss_pred cc-hhccC-ChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QW-CIGHL-TDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~-~l~~~-~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.. +++|+ +.++...+++++.++|||||.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 86 99998 4457889999999999999999984
No 77
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.68 E-value=2.3e-16 Score=142.89 Aligned_cols=119 Identities=15% Similarity=0.001 Sum_probs=93.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcC-------CCCCCCCCCCcceeEEEcCCCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLA-------PENHMAPDMHKATNFFCVPLQDFTP 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~ 226 (284)
..++.+|||||||+|.++..++..... +++|||+|+.|++.|+++.. ..++. ..+++|+++|+.++++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~----~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK----HAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC----CCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC----CCCeEEEECcccCCcc
Confidence 567889999999999999988866444 59999999999999987531 11110 1469999999998775
Q ss_pred CC--CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccCC
Q 023288 227 ET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLLS 280 (284)
Q Consensus 227 ~~--~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d~ 280 (284)
.+ ..||+|+++..++ . ++....|.++.++|||||.|++.|.+.+.+.-++.
T Consensus 247 ~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~ 299 (438)
T 3uwp_A 247 RERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINS 299 (438)
T ss_dssp HHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCS
T ss_pred ccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCc
Confidence 43 4799999987753 2 47778999999999999999999988777665443
No 78
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.68 E-value=5.4e-16 Score=140.69 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=96.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..+..+|||||||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+. .+.+. +||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~~-~~~p~-~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDFF-ETIPD-GADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTT-TCCCS-SCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCCC-CCCCC-CceE
Confidence 456789999999999999999987654 7999999 9999999998765443 357999999998 34443 8999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++..++|++++++...++++++++|+|||++++.|.+.++
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888889999999999999999999987654
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.68 E-value=3.7e-17 Score=143.24 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=83.9
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCC--------C--C--------------Cc
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAP--------D--M--------------HK 212 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~--------~--~--------------~~ 212 (284)
++.+|||||||+|..+..++.....+|+|+|+|+.|++.|++++........ . . ..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 6689999999999965533333345899999999999999987654210000 0 0 00
Q ss_pred ceeEEEcCCCC-CCC-----CCCceeEEEecchhccCChh--hHHHHHHHHHhcCCCCcEEEEEec
Q 023288 213 ATNFFCVPLQD-FTP-----ETGRYDVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 213 ~~~~~~~d~~~-~~~-----~~~~fD~Iv~~~~l~~~~~~--~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.++++.+|+.+ +++ ++++||+|+++.+++|+... ++..+++++.++|||||+|++.+.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 14567778887 443 34679999999999996533 788999999999999999999853
No 80
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=6.8e-17 Score=132.72 Aligned_cols=108 Identities=13% Similarity=0.050 Sum_probs=90.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (284)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++ .+++++++|+.++. +++++||+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL------SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEEccHHHHHhhccCCCccE
Confidence 46789999999999999988877766899999999999999999865432 46899999988763 33579999
Q ss_pred EEecchhccCChhhHHHHHHHHHh--cCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r--~LkpGG~lii~e~ 270 (284)
|+++..+++. .++...+++++.+ +|+|||.+++...
T Consensus 117 i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 117 VLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 9999887764 2467899999999 9999999999754
No 81
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.67 E-value=2.1e-16 Score=137.06 Aligned_cols=112 Identities=12% Similarity=-0.028 Sum_probs=91.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHH------HHHHHHHHcCCCCCCCCCCCcceeEEEcC---CCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSH------FLDAARESLAPENHMAPDMHKATNFFCVP---LQD 223 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~------~l~~ar~~~~~~~~~~~~~~~~~~~~~~d---~~~ 223 (284)
..++.+|||||||+|.++..++..+ . .+|+|+|+|+. |++.|++++...++ ..++++.++| ...
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLTVHFNTNLSDDL 115 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEEEECSCCTTTCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceEEEECChhhhcc
Confidence 4577899999999999999998774 3 47999999997 99999999876543 3578999998 344
Q ss_pred CCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 224 FTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 224 ~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+++++++||+|++..+++|+++. ..+++.+.++++|||.+++.+....
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~--~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASA--NALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCH--HHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred CCCCCCCEEEEEEccchhhCCCH--HHHHHHHHHHhCCCCEEEEEEecCC
Confidence 45567899999999999999854 4678888888888999999986543
No 82
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.67 E-value=2e-16 Score=141.23 Aligned_cols=112 Identities=15% Similarity=0.147 Sum_probs=96.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||+|||+|..+..+++.... +++++|+| .+++.|++++...++ ..++++..+|+.+.+++. .||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~-~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGSAFEVDYGN-DYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESCTTTSCCCS-CEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecccccCCCCC-CCcEE
Confidence 56789999999999999999887543 79999999 999999998754332 346999999998876654 49999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++.+++||+++++...+++++.++|+|||++++.|...++
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 9999999999888899999999999999999999986554
No 83
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.66 E-value=9e-16 Score=138.58 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=96.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|.++..+++.++. +++++|+ +.+++.|++++...++ ..++++..+|+.+.++++ +|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~--~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDIYKESYPE--ADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCTTTSCCCC--CSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCccccCCCCC--CCE
Confidence 456789999999999999999987654 7999999 9999999998765433 345899999998876654 499
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++..++|++++++...+++++.++|||||++++.|.+.++
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 99999999999877899999999999999999999976543
No 84
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=6.2e-17 Score=135.81 Aligned_cols=101 Identities=23% Similarity=0.294 Sum_probs=82.7
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC---CCC-CCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE-TGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~-~~~f 231 (284)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++. ++.+...++.++ +.. .++|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------------~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAG------------AGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTC------------SSCEEECCHHHHHTTCSCCCCCE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhc------------ccccchhhHHhhcccccccCCCc
Confidence 3568999999999999998886654 6999999999999999871 245677766655 433 3459
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
|+|++..+++ .. +...+++++.++|||||.+++.+...
T Consensus 118 D~v~~~~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 118 DLICANFALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp EEEEEESCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECchhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 9999999999 55 56699999999999999999987643
No 85
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.66 E-value=2.7e-16 Score=139.27 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=90.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCC-CCCCCcceeEEEcCCCCCC----C--CCC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM-APDMHKATNFFCVPLQDFT----P--ETG 229 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~-~~~~~~~~~~~~~d~~~~~----~--~~~ 229 (284)
++.+|||+|||+|.++..++.....+|+++|+|+.|++.|+++....+.. ......+++++++|+.+++ + +++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 56799999999999999888765558999999999999999886431000 0000236899999998875 4 245
Q ss_pred ceeEEEecchhccC--ChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 230 RYDVIWVQWCIGHL--TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~--~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+||+|+++.++||+ +.++...+++++.++|||||.++++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 89999999999998 445678999999999999999999754
No 86
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.66 E-value=1.1e-15 Score=126.92 Aligned_cols=105 Identities=16% Similarity=0.139 Sum_probs=87.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|++++...+. .+++++++|+.+.....++||+
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~ 111 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA------RNVTLVEAFAPEGLDDLPDPDR 111 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC------TTEEEEECCTTTTCTTSCCCSE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeCChhhhhhcCCCCCE
Confidence 56778999999999999999998763 3799999999999999998765332 4688999999765544468999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|++..+++ +...+++++.++|||||.+++...
T Consensus 112 i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 112 VFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp EEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 99988765 556899999999999999999754
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.66 E-value=5.4e-16 Score=125.47 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=83.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.|++++...+. ..++ +++.|..+ ++..+++||
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV-----SDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-EEECCTTGGGGGCCSCCS
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-EEecchHhhhhccCCCCC
Confidence 45778999999999999998886643 3799999999999999999876543 2357 77787754 232227899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++..++++ ..+++++.++|||||.+++.+.
T Consensus 97 ~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 97 VIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp EEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred EEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 9999999887 2799999999999999999764
No 88
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.66 E-value=2.7e-16 Score=141.53 Aligned_cols=111 Identities=21% Similarity=0.260 Sum_probs=95.8
Q ss_pred CceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeEEE
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDVIW 235 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~Iv 235 (284)
+.+|||||||+|.++..+++.++. +++++|+ +.+++.++++....++ ..++++..+|+.+.+. .++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLLDARNFEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTTCGGGGTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcccCcccCCCCccEEE
Confidence 789999999999999999987654 8999999 8899999998765443 3579999999988651 335799999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
+..++||+++++...++++++++|||||++++.|.+.++
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999999999888899999999999999999999976544
No 89
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.65 E-value=7.1e-16 Score=149.36 Aligned_cols=113 Identities=15% Similarity=0.156 Sum_probs=92.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|++++............+++++++|+.++++.+++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 4678999999999999998886653 47999999999999999854311000000024799999999999988889999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|++..+++|++++....+++++.++|||| .++++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99999999999887778999999999999 777765
No 90
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.65 E-value=1.4e-16 Score=134.68 Aligned_cols=92 Identities=13% Similarity=0.124 Sum_probs=78.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCC-CCCCCC-CCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL-QDFTPE-TGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~fD~ 233 (284)
.++.+|||+|||+|.++..++..+. +|+|+|+|+.|++.++++. .+++++++|+ ..++++ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANA-----------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHC-----------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhC-----------CCceEEEcchhhccCCcCCCCEEE
Confidence 3678999999999999998887754 6999999999999999983 3588999999 556766 789999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
|+++ . +...+++++.++|||||.++.
T Consensus 115 v~~~------~--~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 115 IVSR------R--GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEE------S--CCSGGGGGHHHHEEEEEEEEE
T ss_pred EEeC------C--CHHHHHHHHHHHcCCCcEEEE
Confidence 9987 1 334789999999999999983
No 91
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=8.6e-16 Score=126.68 Aligned_cols=111 Identities=12% Similarity=0.002 Sum_probs=89.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 231 (284)
..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|++++...++ ..+++++++|+.+++ ..+++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGGGGGTCCSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHhhhccCCc
Confidence 3467899999999999999988763 23799999999999999999876543 357999999988775 455799
Q ss_pred eEEEecchhc-------cCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 232 DVIWVQWCIG-------HLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~-------~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+|+++..+. ....++...+++++.++|||||.+++...
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 9999887551 11223456799999999999999999864
No 92
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.65 E-value=6.4e-16 Score=140.08 Aligned_cols=111 Identities=17% Similarity=0.241 Sum_probs=92.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|.++..+++.+.. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+. .||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~~-~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGDFFK-PLPV-TADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCSC-CEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-cCCC-CCCE
Confidence 456789999999999999999987644 7999999 9999999998765433 3479999999876 3333 4999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec--cCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN--IAR 273 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~--~~~ 273 (284)
|++..++||+++++...+++++.++|||||++++.|. +.+
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEG 293 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcC
Confidence 9999999999987778999999999999999999998 543
No 93
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.65 E-value=4.6e-16 Score=130.75 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=86.1
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC--CCCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD--FTPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~ 233 (284)
.++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++++. .++.+.|+.+ .++++++||+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~-------------~~~~~~d~~~~~~~~~~~~fD~ 96 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL-------------DHVVLGDIETMDMPYEEEQFDC 96 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS-------------SEEEESCTTTCCCCSCTTCEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC-------------CcEEEcchhhcCCCCCCCccCE
Confidence 46789999999999999988876 467999999999999998764 2578888876 4556689999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|++..+++|++ +...+++++.++|+|||.+++....
T Consensus 97 v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 97 VIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99999999998 5569999999999999999998643
No 94
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=1.4e-15 Score=126.70 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=84.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+......+||+|
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~D~v 126 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGL-----SPRMRAVQGTAPAALADLPLPEAV 126 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCTTGGGTTSCCCSEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEEEEeCchhhhcccCCCCCEE
Confidence 457789999999999999998877 55799999999999999999865543 236899999998843333579999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++...+ +.. +++++.++|||||.+++...
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 987744 344 99999999999999999754
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.64 E-value=4.4e-16 Score=136.03 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=84.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|.++..++.+ ...+|+|+|+|+.|++.|++++...++ .+++++++|+.+++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v~gDa~~l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV------DGVNVITGDETVID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC------CSEEEEESCGGGGG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC------CCeEEEECchhhCC--CCCcCE
Confidence 678899999999999877555444 334799999999999999999865432 46899999998875 579999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|++... .+ +...+++++.++|||||+|++.+.
T Consensus 192 V~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 998654 33 677999999999999999999863
No 96
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.64 E-value=2.8e-16 Score=142.95 Aligned_cols=109 Identities=21% Similarity=0.213 Sum_probs=91.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+..+|+|+|+| .|++.|++++...++ ..+++++++|+.+++++ ++||+|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGGGCCCS-SCEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchhhcCcC-CcceEE
Confidence 45778999999999999999988777689999999 999999999876554 35589999999998876 799999
Q ss_pred EecchhccCCh-hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTD-DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~-~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+.+++.. ..+..+++++.++|||||.+++.+.
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99776666543 3477899999999999999988653
No 97
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.64 E-value=6.8e-16 Score=134.22 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=86.4
Q ss_pred CCceEEEeeccccH----HHHHHHHhCC-----CcEEEEeCCHHHHHHHHHHcCC-----------------------CC
Q 023288 157 QHLVALDCGSGIGR----ITKNLLIRYF-----NEVDLLEPVSHFLDAARESLAP-----------------------EN 204 (284)
Q Consensus 157 ~~~~VLDiGcGtG~----~s~~l~~~~~-----~~v~gvD~S~~~l~~ar~~~~~-----------------------~~ 204 (284)
++.+|||+|||||. ++..+++... .+|+|+|+|+.||+.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5554554411 2799999999999999987410 00
Q ss_pred -CC-CCCCCcceeEEEcCCCCCCCC-CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 205 -HM-APDMHKATNFFCVPLQDFTPE-TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 205 -~~-~~~~~~~~~~~~~d~~~~~~~-~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+. ......++.|.+.|+.+.+++ .++||+|+|.++++|++++....+++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00 000113689999999886544 47899999999999999888889999999999999999994
No 98
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.64 E-value=2.3e-16 Score=131.13 Aligned_cols=109 Identities=16% Similarity=0.159 Sum_probs=87.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC--CCCc-eeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGR-YDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~-fD~ 233 (284)
++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++. ..+++++++|+.++.. .+++ ||+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS----SEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC----TTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC----ccceEEEECCHHHHHHhhccCCCCCE
Confidence 45799999999999999888777768999999999999999998654320 0468999999876532 3568 999
Q ss_pred EEecchhccCChhhHHHHHHHH--HhcCCCCcEEEEEeccC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKENIA 272 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~--~r~LkpGG~lii~e~~~ 272 (284)
|++...++ .. +...+++.+ .++|+|||.+++..+..
T Consensus 129 I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 129 VFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 99988854 33 566888888 67899999999976543
No 99
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.64 E-value=9.4e-16 Score=137.63 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=87.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...++ ..+++++++|+.++++++++||+|
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~I 135 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEEVHLPVEKVDVI 135 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSCSCEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHHhcCCCCcEEEE
Confidence 356789999999999999988877665899999997 99999998866543 357899999999988777899999
Q ss_pred Eecch---hccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 235 WVQWC---IGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 235 v~~~~---l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
++.++ +.+.. ++..++.++.++|||||.++
T Consensus 136 vs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFES--MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTC--HHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHH--HHHHHHHHHHhhcCCCcEEE
Confidence 98773 44434 67789999999999999988
No 100
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.64 E-value=7.9e-16 Score=137.45 Aligned_cols=108 Identities=18% Similarity=0.216 Sum_probs=92.7
Q ss_pred ceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEec
Q 023288 159 LVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~ 237 (284)
.+|||+|||+|..+..+++..+. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDMLQ-EVP-SNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCTTT-CCC-SSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCCCC-CCC-CCCCEEEEc
Confidence 89999999999999999887644 7999999 9999999998653221 2468999999977 444 689999999
Q ss_pred chhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 238 ~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
.++||+++++...+++++.++|+|||++++.|.+.++
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999999888889999999999999999999986543
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.63 E-value=2.2e-16 Score=133.12 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=86.2
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C--CCCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T--PETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~fD 232 (284)
++.+|||||||+|.++..++..... .|+|+|+|+.|++.|++++...++ .+++++++|+.++ + +++++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcCCCChh
Confidence 5679999999999999999877654 799999999999999998765443 4689999998774 2 5678999
Q ss_pred EEEecchhccCChhhH------HHHHHHHHhcCCCCcEEEEEe
Q 023288 233 VIWVQWCIGHLTDDDF------VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~------~~~l~~~~r~LkpGG~lii~e 269 (284)
.|++.+...+...... ..+++++.++|||||.|++..
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 9998865444332221 259999999999999999974
No 102
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.63 E-value=1.1e-15 Score=128.04 Aligned_cols=107 Identities=16% Similarity=0.197 Sum_probs=86.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (284)
++.+|||||||+|.++..++...+. +++|+|+|+.+++.|++++...++ .+++++++|+.+++ +++++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDLTDYFEDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCGGGTSCTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCCCCCCE
Confidence 5678999999999999999887643 799999999999999998765332 46899999998876 66779999
Q ss_pred EEecchhccCChh------hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~------~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+++....+.... ....+++++.++|+|||.+++..
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9998765432211 12579999999999999999964
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.63 E-value=9.5e-16 Score=127.71 Aligned_cols=102 Identities=19% Similarity=0.089 Sum_probs=87.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...+. .++++..+|+.+...+.++||+|
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDL------HNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC------CceEEEECCcccCCccCCCccEE
Confidence 467889999999999999988877 45799999999999999999865443 36899999998866566799999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|+++ ++.++|||||++++.-..
T Consensus 148 ~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 99999999883 478999999999997553
No 104
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.63 E-value=1.9e-15 Score=123.46 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=89.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcc--eeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA--TNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++.. ..+++++|+|+.+++.+++++...+. .+ +++.++|+.+.. ++++||
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~------~~~~~~~~~~d~~~~~-~~~~~D 121 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNL------DNYDIRVVHSDLYENV-KDRKYN 121 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTC------TTSCEEEEECSTTTTC-TTSCEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCC------CccceEEEECchhccc-ccCCce
Confidence 347789999999999999988866 55799999999999999998865432 33 889999998743 357899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|+++.++++. .++...+++++.++|+|||.+++....
T Consensus 122 ~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 122 KIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp EEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 99999888763 346779999999999999999998754
No 105
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=2.6e-16 Score=132.22 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=83.5
Q ss_pred CceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEec
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~ 237 (284)
+.+|||+|||+|.++..++.. +++|+|+.|++.++++ ++++.++|+.++++++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 679999999999999977633 9999999999999886 2678899998888777899999999
Q ss_pred chhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 238 ~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
.+++|++ +...+++++.++|+|||.+++.+..
T Consensus 110 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 110 TTICFVD--DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp SCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 9999998 6669999999999999999998754
No 106
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=6.3e-16 Score=129.68 Aligned_cols=107 Identities=12% Similarity=0.236 Sum_probs=85.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~ 233 (284)
++.+|||||||+|.++..++..... +|+|+|+|+.|++.|++++...++ .+++++++|+.+++ +++++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCcCCcCE
Confidence 5678999999999999999877543 799999999999999998765432 46899999998765 56689999
Q ss_pred EEecchhccCChh------hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~------~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+++....+.... ....+++++.++|||||.|++..
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 9987654332211 03579999999999999999864
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.63 E-value=1.9e-15 Score=126.56 Aligned_cols=102 Identities=13% Similarity=0.006 Sum_probs=78.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC----CCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~ 229 (284)
..++.+|||+|||+|..+..+++... .+|+|+|+|+.|++.+.+.... ..++.++.+|+... ++. +
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTC-C
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------CCCeEEEEcCCCCchhhcccc-c
Confidence 56778999999999999998887642 3799999999987766555432 23577888888763 333 7
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+||+|+++.. + ..+...+++++.++|||||.|++.-
T Consensus 126 ~fD~V~~~~~-~---~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDIA-Q---KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECCC-S---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEecc-C---hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999998732 2 1244456999999999999999973
No 108
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.63 E-value=7e-16 Score=138.96 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=89.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|++++...++ ..+++++++|+.++++++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKL-----DHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCC-----CCcEEEEECcHHHccCCCCceEEEE
Confidence 36689999999999999998877666899999995 99999998876554 3458999999999988778999999
Q ss_pred ecchhccC-ChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 236 VQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 236 ~~~~l~~~-~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+.++.+++ ....+..++.++.++|||||.+++
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 98765444 223677899999999999999874
No 109
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.63 E-value=7.9e-16 Score=140.03 Aligned_cols=107 Identities=23% Similarity=0.227 Sum_probs=92.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++...+. +++++++|+.+...++++||+|+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~-------~v~~~~~D~~~~~~~~~~fD~Ii 303 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL-------KAQALHSDVDEALTEEARFDIIV 303 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTSCTTCCEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-------CeEEEEcchhhccccCCCeEEEE
Confidence 3567999999999999999987755 799999999999999999876432 37899999998876668999999
Q ss_pred ecchhcc---CChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 236 VQWCIGH---LTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~~~l~~---~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+|+ ...++...+++++.++|||||.++++.+
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 9999988 3445678999999999999999999865
No 110
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.62 E-value=1.8e-15 Score=136.04 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=88.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|..+..+++.++. +++++|+ +.++. +++....+. ..++++..+|+.+ +.+ +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~-----~~~v~~~~~d~~~-~~p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV-----AGRWKVVEGDFLR-EVP--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG-----TTSEEEEECCTTT-CCC--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC-----CCCeEEEecCCCC-CCC--CCcE
Confidence 456789999999999999999987665 7899999 45555 333332221 3569999999962 333 8999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSG 275 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~ 275 (284)
|++..++||+++++...++++++++|||||+|++.|.+.++.
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~ 292 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEG 292 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSS
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 999999999998877899999999999999999999865543
No 111
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=9.8e-18 Score=142.89 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=84.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.|++++...++ ..+++++++|+.+++ ++++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECChHHhc-ccCCCCEEEE
Confidence 57899999999999999998776 5799999999999999999876543 247999999998876 4579999999
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+.++++..... ..+.++.++|+|||.+++.
T Consensus 151 ~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYAT--AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGGG--SSSBCTTTSCSSCHHHHHH
T ss_pred CCCcCCcchhh--hHHHHHHhhcCCcceeHHH
Confidence 99999876433 4666777888888875543
No 112
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.62 E-value=1.3e-15 Score=137.36 Aligned_cols=109 Identities=22% Similarity=0.281 Sum_probs=93.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|.++..+++.+.. +++++|+ +.+++.|++++...++ ..++++..+|+.+ +.+ ..||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~-~~~-~~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGDFFE-PLP-RKADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECCTTS-CCS-SCEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCCCCC-CCC-CCccE
Confidence 356789999999999999999987654 7999999 9999999998765433 3479999999876 333 35999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|++..++||+++++...+++++.++|||||++++.|.+
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99999999999887789999999999999999999987
No 113
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=1e-16 Score=130.62 Aligned_cols=119 Identities=10% Similarity=0.034 Sum_probs=89.4
Q ss_pred ccccHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcc
Q 023288 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (284)
Q Consensus 135 ~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~ 213 (284)
+.....+....+. . ..++.+|||+|||+|.++..++...+. +|+++|+|+.|++.+++++...|. ..+
T Consensus 33 Lp~ld~fY~~~~~-~-----l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~-----~~~ 101 (200)
T 3fzg_A 33 VATLNDFYTYVFG-N-----IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT-----TIK 101 (200)
T ss_dssp GGGHHHHHHHHHH-H-----SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC-----SSE
T ss_pred hHhHHHHHHHHHh-h-----cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC-----Ccc
Confidence 3444455444333 2 235789999999999999988654322 899999999999999999876543 224
Q ss_pred eeEEEcCCCCCCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 214 ~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+++ .|.... .+.++||+|++..++|+++ +....+.++.+.|+|||.|+-.+
T Consensus 102 v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~--~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 102 YRF--LNKESD-VYKGTYDVVFLLKMLPVLK--QQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEE--ECCHHH-HTTSEEEEEEEETCHHHHH--HTTCCHHHHHHTCEEEEEEEEEE
T ss_pred EEE--eccccc-CCCCCcChhhHhhHHHhhh--hhHHHHHHHHHHhCCCCEEEEeC
Confidence 444 555443 3457899999999999994 44577779999999999988877
No 114
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.62 E-value=1.3e-15 Score=137.18 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=91.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...++ ..+++++.+|+.+++.+ ++||+|
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~~~~~~-~~~D~I 120 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDII 120 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchhhCCCC-CceeEE
Confidence 346789999999999999988877666899999996 99999998765543 35789999999988765 589999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++..+++|+..++....+.++.++|||||.+++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9999998887777788899999999999999854
No 115
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.62 E-value=1.1e-16 Score=147.46 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=83.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++... .....+...+...+++++++||+|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIR--------VRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCC--------EECSCCSHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCC--------cceeeechhhHhhcccCCCCEEEE
Confidence 45778999999999999999887766 699999999999999987211 011112223333444456799999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+++|++ +...+++++.++|||||++++...
T Consensus 176 ~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 176 YAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9999999998 677999999999999999999754
No 116
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=4.5e-15 Score=125.71 Aligned_cols=109 Identities=8% Similarity=-0.006 Sum_probs=87.4
Q ss_pred hcCCccCCCCceEEEeeccccHHHHHHHHhC-CC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--
Q 023288 149 RFPNARNNQHLVALDCGSGIGRITKNLLIRY-FN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (284)
Q Consensus 149 ~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~-~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 224 (284)
.+.....+++.+|||+|||+|.++..+++.- .. +|+++|+|+.|++.+++++.. ..|+..+..|....
T Consensus 69 gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--------~~ni~~V~~d~~~p~~ 140 (233)
T 4df3_A 69 GLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--------RRNIFPILGDARFPEK 140 (233)
T ss_dssp TCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--------CTTEEEEESCTTCGGG
T ss_pred chhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--------hcCeeEEEEeccCccc
Confidence 3344457899999999999999999998763 33 799999999999999999876 35788888887653
Q ss_pred -CCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 225 -TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 225 -~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+...+++|+|++... +.. +...++.++.+.|||||.++++.
T Consensus 141 ~~~~~~~vDvVf~d~~--~~~--~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 141 YRHLVEGVDGLYADVA--QPE--QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp GTTTCCCEEEEEECCC--CTT--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccceEEEEEEecc--CCh--hHHHHHHHHHHhccCCCEEEEEE
Confidence 345678999987533 323 55689999999999999999974
No 117
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.61 E-value=1.2e-15 Score=126.68 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=86.2
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.|++.|++++...+. .++++.++|+.+.. +++||+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI------YDIALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESSTTTTC--CSCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEeccccccC--CCCceEEE
Confidence 36789999999999999988865555899999999999999999865443 23889999997753 47899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++.++++ +..+++++.++|+|||.+++.+..
T Consensus 131 ~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 131 ANILAEI-----LLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred ECCcHHH-----HHHHHHHHHHhcCCCCEEEEEecC
Confidence 9988765 458999999999999999997643
No 118
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=2e-15 Score=127.51 Aligned_cols=106 Identities=21% Similarity=0.154 Sum_probs=84.4
Q ss_pred CCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeE
Q 023288 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 233 (284)
.++.+|||+||| +|.++..++.....+|+|+|+|+.+++.|++++...+ .+++++++|+..+ ++++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN-------SNVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT-------CCCEEEECSSCSSTTTCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC-------CCcEEEeCCchhhhhcccCceeE
Confidence 467899999999 9999998887744579999999999999999986543 2688999997544 344579999
Q ss_pred EEecchhccCChh-----------------hHHHHHHHHHhcCCCCcEEEEE
Q 023288 234 IWVQWCIGHLTDD-----------------DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~~~~~~-----------------~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|+++..+++.++. ....+++++.++|||||.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 9999777654431 1368999999999999999985
No 119
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.60 E-value=9e-16 Score=129.56 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=87.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCC-cceeEEEcCCCCCC--CCCCce
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMH-KATNFFCVPLQDFT--PETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~-~~~~~~~~d~~~~~--~~~~~f 231 (284)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ . .+++++++|+.++. +.+++|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~~i~~~~gda~~~l~~~~~~~f 130 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-----SPSRVRFLLSRPLDVMSRLANDSY 130 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHGGGSCTTCE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcCcEEEEEcCHHHHHHHhcCCCc
Confidence 345999999999999999987643 3799999999999999999876554 3 57999999876642 335799
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccC
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLL 279 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d 279 (284)
|+|++.... .+...+++++.++|||||+|++ +++.-.|.+.+
T Consensus 131 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~-dn~~~~g~v~~ 172 (221)
T 3dr5_A 131 QLVFGQVSP-----MDLKALVDAAWPLLRRGGALVL-ADALLDGTIAD 172 (221)
T ss_dssp EEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEE-TTTTGGGTCSC
T ss_pred CeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEE-eCCCCCCcCCC
Confidence 999987542 2556799999999999999888 45444444444
No 120
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.60 E-value=5.5e-15 Score=134.02 Aligned_cols=104 Identities=17% Similarity=0.331 Sum_probs=89.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..+..+|||||||+|.++..+++.++. +++++|+ +.+++.+++ ..+++++.+|+.+ +.+.+ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~p~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------FSGVEHLGGDMFD-GVPKG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------------cCCCEEEecCCCC-CCCCC--CE
Confidence 346689999999999999999987655 7999999 889876653 2468999999987 55543 99
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++.+++|++++++...++++++++|||||+|++.|.+.++
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888889999999999999999999987654
No 121
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.60 E-value=8.1e-15 Score=124.15 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=83.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC----CCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD----FTPETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~ 229 (284)
..++.+|||+|||+|.++..++.... .+|+|+|+|+.|++.+++++.. ..++.++.+|+.+ .++. +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------CCCeEEEECCCCCcccccccC-c
Confidence 45778999999999999999987743 4799999999999999998765 2568899999988 6665 7
Q ss_pred ceeEEEecchhccCChh-hHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~-~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+||+|+ +++++. ....+++++.++|||||.+++.
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 899999 444433 2357899999999999999996
No 122
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=6.4e-15 Score=124.46 Aligned_cols=100 Identities=20% Similarity=0.133 Sum_probs=84.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++++.... .++++.++|+.+....+++||+|
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~--------~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY--------NNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC--------SSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc--------CCeEEEECCcccccccCCCccEE
Confidence 4567899999999999999988776 57999999999999999998763 16889999987733345789999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++|+++ ++.++|||||.+++....
T Consensus 139 ~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 139 VVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 99999999872 588899999999998654
No 123
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.60 E-value=1.3e-15 Score=131.36 Aligned_cols=110 Identities=19% Similarity=0.061 Sum_probs=88.4
Q ss_pred CC-CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCce
Q 023288 155 NN-QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (284)
Q Consensus 155 ~~-~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~f 231 (284)
.. ++.+|||+|||+|.++..++..+..+|+|+|+++.+++.|++++...++ ..+++++++|+.++. +++++|
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~f 120 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKITDLIPKERA 120 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGGGTSCTTCE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhhhhhccCCc
Confidence 45 6789999999999999988877655899999999999999999876554 346899999998875 446799
Q ss_pred eEEEecchhccC------------------ChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHL------------------TDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~------------------~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|+++..+... ...++..+++.+.++|||||.+++.-
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999998654332 11346689999999999999999964
No 124
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=7.3e-15 Score=126.93 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=87.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCC---CCCCCCCCCcceeEEEcCCCCC------
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAP---ENHMAPDMHKATNFFCVPLQDF------ 224 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~---~~~~~~~~~~~~~~~~~d~~~~------ 224 (284)
..++.+|||+|||+|.++..++.+... +|+++|+++.+++.|++++.. .++ ..+++++++|+.++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF-----SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT-----GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC-----cceEEEEeCCHHHHhhhhhh
Confidence 446789999999999999998887643 899999999999999999876 554 34689999999887
Q ss_pred -CCCCCceeEEEecchhccC----------------ChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 225 -TPETGRYDVIWVQWCIGHL----------------TDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 225 -~~~~~~fD~Iv~~~~l~~~----------------~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+++++||+|+++..+... ....+..+++.+.++|||||.|++.-
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2456799999998443321 22347789999999999999999863
No 125
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.60 E-value=7.8e-16 Score=128.71 Aligned_cols=89 Identities=24% Similarity=0.299 Sum_probs=75.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||||||+|.++..+. .+++|+|+|+. ++++.++|+.++++++++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------------~~~~~~~d~~~~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------------DPRVTVCDMAQVPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------------STTEEESCTTSCSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------------CceEEEeccccCCCCCCCEeEEE
Confidence 456799999999999988662 46999999976 25678899998888788999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+..++|+ . +...+++++.++|+|||.+++.+...
T Consensus 121 ~~~~l~~-~--~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 121 FCLSLMG-T--NIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EESCCCS-S--CHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred Eehhccc-c--CHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 9999975 4 67799999999999999999987643
No 126
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.60 E-value=1.5e-15 Score=136.46 Aligned_cols=106 Identities=20% Similarity=0.231 Sum_probs=88.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
++.+|||+|||+|.++..++..+.. +|+++|+|+.|++.+++++...+. .++++..|+.+.. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-------~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-------EGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTTTTC--CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-------CCEEEEccccccc--cCCeeEEE
Confidence 4579999999999999999887754 799999999999999999865432 3567888887654 57899999
Q ss_pred ecchhccC---ChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~---~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++.++|+. ..++...+++++.++|||||.+++..+.
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 99999863 3345789999999999999999998764
No 127
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=1.2e-15 Score=123.60 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=85.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~I 234 (284)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|++++...++ ..+++++++|+.++ +..+++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcHHHhHHhhcCCCCEE
Confidence 35679999999999999988877556899999999999999999876543 34689999998763 3233579999
Q ss_pred EecchhccCChhhHHHHHHHHH--hcCCCCcEEEEEecc
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~--r~LkpGG~lii~e~~ 271 (284)
+++..++. .....+++.+. ++|+|||.+++....
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 99877542 24456777776 999999999997553
No 128
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.59 E-value=9e-16 Score=130.32 Aligned_cols=114 Identities=18% Similarity=0.167 Sum_probs=88.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC--CCCcee
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD 232 (284)
.++.+|||||||+|..+..++... ..+|+++|+|+.+++.|++++...++ ..+++++++|+.+... .+++||
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD 144 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF-----ENQVRIIEGNALEQFENVNDKVYD 144 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCHHHHTTSCEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhhccCCcc
Confidence 356799999999999999888633 23799999999999999999876544 3479999999977532 257899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccCC
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLLS 280 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d~ 280 (284)
+|++.... .....+++++.++|||||+|++ +++.-.+.+.++
T Consensus 145 ~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~-d~~~~~g~v~~~ 186 (232)
T 3ntv_A 145 MIFIDAAK-----AQSKKFFEIYTPLLKHQGLVIT-DNVLYHGFVSDI 186 (232)
T ss_dssp EEEEETTS-----SSHHHHHHHHGGGEEEEEEEEE-ECTTGGGGGGCG
T ss_pred EEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEE-eeCCcCccccCc
Confidence 99976542 2566899999999999999877 555555555443
No 129
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.59 E-value=3.9e-15 Score=134.80 Aligned_cols=104 Identities=17% Similarity=0.260 Sum_probs=89.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..+..+|||||||+|..+..+++.++. +++++|+ +.+++.+++ ..+++++.+|+.+ +.+.+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------------FPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------------cCCeEEEeCCcCC-CCCCC--CE
Confidence 346689999999999999999987665 7999999 888876653 2468999999987 65543 99
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++.+++|++++++...++++++++|||||+|++.|.+.++
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999999999888999999999999999999999987654
No 130
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=9.2e-16 Score=130.83 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=84.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC---CCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~f 231 (284)
.++.+|||+|||+|..+..++.... .+|+|+|+|+.|++.|++++...++ .+++++++|+.+++.. +++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhcccccccCCc
Confidence 3567999999999999998885433 3799999999999999998765432 3589999998877643 5789
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+|++..+ . ++..+++++.++|||||.+++...
T Consensus 143 D~V~~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 143 DIVTARAV----A--RLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EEEEEECC----S--CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cEEEEecc----C--CHHHHHHHHHHhcCCCCEEEEEeC
Confidence 99998763 3 567999999999999999998753
No 131
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.59 E-value=1.4e-15 Score=126.38 Aligned_cols=105 Identities=14% Similarity=0.120 Sum_probs=85.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Iv 235 (284)
++.+|||+|||+|.++..++.++..+|+++|+|+.|++.|++++...++ .+++++++|+.++ +...++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~~~~~~~~~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNAMSFLAQKGTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCHHHHHSSCCCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCHHHHHhhcCCCCCEEE
Confidence 4579999999999999988878776899999999999999999865432 4689999998763 44457899999
Q ss_pred ecchhccCChhhHHHHHHHHHh--cCCCCcEEEEEec
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r--~LkpGG~lii~e~ 270 (284)
+...++ .. ....+++.+.+ +|+|||.+++..+
T Consensus 128 ~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFR-RG--LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 987754 23 55578888865 5999999998754
No 132
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=4.2e-15 Score=135.03 Aligned_cols=112 Identities=19% Similarity=0.164 Sum_probs=88.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++..++ .+|+++|+|+.|++.+++++...++. ...++++...|+.+ .+++++||+
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~---~~~~v~~~~~D~~~-~~~~~~fD~ 295 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE---ALDRCEFMINNALS-GVEPFRFNA 295 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGG---GGGGEEEEECSTTT-TCCTTCEEE
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCC---cCceEEEEechhhc-cCCCCCeeE
Confidence 34558999999999999999998763 48999999999999999988764421 01357889999987 445579999
Q ss_pred EEecchhccC---ChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~---~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+++..+|+. .......+++++.++|||||.++++.+
T Consensus 296 Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 296 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 9999998863 333455789999999999999999765
No 133
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.59 E-value=4.6e-16 Score=148.74 Aligned_cols=110 Identities=16% Similarity=0.109 Sum_probs=90.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--CCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--TPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~ 233 (284)
.++.+|||||||+|.++..+++.+.. |+|||+|+.+|+.|+.++...+ ..+++|.+++++++ ..++++||+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~-V~giD~~~~~i~~a~~~a~~~~------~~~~~~~~~~~~~~~~~~~~~~fD~ 137 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGAT-IVGIDFQQENINVCRALAEENP------DFAAEFRVGRIEEVIAALEEGEFDL 137 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTST------TSEEEEEECCHHHHHHHCCTTSCSE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCE-EEEECCCHHHHHHHHHHHHhcC------CCceEEEECCHHHHhhhccCCCccE
Confidence 35689999999999999999988775 9999999999999999887643 24689999999887 355689999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
|+|..+++|+++++....+..+.+.|+++|..++...+.
T Consensus 138 v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 138 AIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp EEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred EEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999999999987664445566778888888777765543
No 134
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.58 E-value=3.5e-15 Score=127.12 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=81.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCC------CCCCCCCCCcceeEEEcCCCC-CC--
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAP------ENHMAPDMHKATNFFCVPLQD-FT-- 225 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~------~~~~~~~~~~~~~~~~~d~~~-~~-- 225 (284)
.++.+|||||||+|.++..++..... .|+|+|+|+.|++.|++++.. .+ ..+++++++|+.+ ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~------~~nv~~~~~d~~~~l~~~ 118 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG------FQNIACLRSNAMKHLPNF 118 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC------CTTEEEEECCTTTCHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC------CCeEEEEECcHHHhhhhh
Confidence 46679999999999999998876543 799999999999999876531 11 2579999999987 55
Q ss_pred CCCCceeEEEecchhccCChhh------HHHHHHHHHhcCCCCcEEEEE
Q 023288 226 PETGRYDVIWVQWCIGHLTDDD------FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~------~~~~l~~~~r~LkpGG~lii~ 268 (284)
+++++||.|++.+.-.+..... ...+++++.++|||||.|++.
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 6678999999765433221000 137999999999999999986
No 135
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.58 E-value=3.4e-14 Score=128.10 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=94.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
.....+|+|||||+|.++..++++++. +++..|. |.+++.|+++....+ ..+++++.+|+.+.+++ .+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~gD~~~~~~~--~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEGDFFKDPLP--EADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--------CCSEEEEESCTTTSCCC--CCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc------cCceeeecCccccCCCC--CceE
Confidence 445679999999999999999988777 7888886 889999999886533 36799999999765443 5899
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
|++.+++|++++++...+|++++++|+|||.++|.|.+.++
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 99999999999998999999999999999999999987543
No 136
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.58 E-value=5.3e-15 Score=126.88 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=87.2
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CC--CCCc
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TP--ETGR 230 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~--~~~~ 230 (284)
.++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+. +. ..++
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHTCCSCCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHhcCCCCC
Confidence 3568999999999999998886643 3799999999999999999876554 34789999998663 21 2358
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccC
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLL 279 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d 279 (284)
||+|++... ..+...+++++.++|||||+|++. ++...+.+.+
T Consensus 137 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~-~~~~~g~v~~ 179 (248)
T 3tfw_A 137 FDLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGD-NVVRDGEVVN 179 (248)
T ss_dssp CSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEE-CCSGGGGGGC
T ss_pred eEEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEe-CCCcCCcccC
Confidence 999998653 335668999999999999988774 4444444443
No 137
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.58 E-value=5.2e-15 Score=127.81 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=92.7
Q ss_pred ccHHHHHHHHHhhcCCccCCCCceEEEeeccc--cHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCc
Q 023288 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGI--GRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHK 212 (284)
Q Consensus 137 ~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGt--G~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~ 212 (284)
..+.|+.+.+..+.. .....+|||||||+ +..+..++.+.. .+|+++|.|+.|++.|++++...+ ..
T Consensus 61 ~nr~fl~rav~~l~~---~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~------~~ 131 (277)
T 3giw_A 61 ANRDWMNRAVAHLAK---EAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP------EG 131 (277)
T ss_dssp HHHHHHHHHHHHHHH---TSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS------SS
T ss_pred HHHHHHHHHHHHhcc---ccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC------CC
Confidence 345566665543321 12346899999997 334444554422 279999999999999999987532 24
Q ss_pred ceeEEEcCCCCCCC----C--CCcee-----EEEecchhccCChhh-HHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 213 ATNFFCVPLQDFTP----E--TGRYD-----VIWVQWCIGHLTDDD-FVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 213 ~~~~~~~d~~~~~~----~--~~~fD-----~Iv~~~~l~~~~~~~-~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+++|+++|+.++.. + .+.|| .|+++.+|||+++.+ ...+++++.+.|+|||+|++++.+.+
T Consensus 132 ~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 132 RTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp EEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 68999999988520 1 23455 688999999999765 67899999999999999999976543
No 138
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=3.3e-15 Score=128.06 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=87.1
Q ss_pred CCCceEEEeeccccHHHHHHHHh--C-CCcEEEEeCCHHHHHHHHHHcCCC---CCCCCCCCcc----------------
Q 023288 156 NQHLVALDCGSGIGRITKNLLIR--Y-FNEVDLLEPVSHFLDAARESLAPE---NHMAPDMHKA---------------- 213 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~--~-~~~v~gvD~S~~~l~~ar~~~~~~---~~~~~~~~~~---------------- 213 (284)
.++.+|||+|||+|.++..++.. . ..+|+|+|+|+.|++.|++++... ++ ..+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 124 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-----TARELERREQSERFGKPSY 124 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-----HHHHHHHHHHHHHHCCHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-----cccchhhhhhhhhcccccc
Confidence 35689999999999999988876 2 237999999999999999887653 21 011
Q ss_pred ---------ee-------------EEEcCCCCCCC-----CCCceeEEEecchhccCCh-------hhHHHHHHHHHhcC
Q 023288 214 ---------TN-------------FFCVPLQDFTP-----ETGRYDVIWVQWCIGHLTD-------DDFVSFFKRAKVGL 259 (284)
Q Consensus 214 ---------~~-------------~~~~d~~~~~~-----~~~~fD~Iv~~~~l~~~~~-------~~~~~~l~~~~r~L 259 (284)
++ +.++|+.+... ...+||+|+++..+++... +....+++++.++|
T Consensus 125 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 125 LEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc
Confidence 55 89999877432 3348999999987776542 45678999999999
Q ss_pred CCCcEEEEEeccC
Q 023288 260 KPGGFFVLKENIA 272 (284)
Q Consensus 260 kpGG~lii~e~~~ 272 (284)
+|||+++++.+..
T Consensus 205 kpgG~l~~~~~~~ 217 (250)
T 1o9g_A 205 PAHAVIAVTDRSR 217 (250)
T ss_dssp CTTCEEEEEESSS
T ss_pred CCCcEEEEeCcch
Confidence 9999999976543
No 139
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=2.1e-15 Score=122.89 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=84.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (284)
.++.+|||+|||+|.++..++..+..+|+++|+|+.|++.|++++...++ ..+++++++|+.+.. .++++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-----PEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEECcHHHHHHHHHhcCCCC
Confidence 35679999999999999988876656899999999999999998765432 246899999987632 125789
Q ss_pred eEEEecchhccCChhhHHHHHHHH--HhcCCCCcEEEEEec
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRA--KVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~--~r~LkpGG~lii~e~ 270 (284)
|+|+++..++.. .....++.+ .++|+|||.+++...
T Consensus 118 D~i~~~~~~~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 118 DLVLLDPPYAKQ---EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEEECCCGGGC---CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CEEEECCCCCch---hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 999998886532 334666666 899999999998754
No 140
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.57 E-value=4.9e-15 Score=132.29 Aligned_cols=105 Identities=16% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++..+++.+..+|+|+|+| .|++.|++++...++ ..+++++.+|+.++++++++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhhccCCCCcccEEEE
Confidence 567999999999999998887766689999999 599999998876544 35689999999998877779999999
Q ss_pred cchhccCC-hhhHHHHHHHHHhcCCCCcEEEE
Q 023288 237 QWCIGHLT-DDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 237 ~~~l~~~~-~~~~~~~l~~~~r~LkpGG~lii 267 (284)
.++.+++. ...+..++.++.++|||||.++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 86544442 23577899999999999999974
No 141
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.57 E-value=3.6e-15 Score=135.34 Aligned_cols=103 Identities=15% Similarity=0.201 Sum_probs=87.7
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||||||+|.++..+++.++. +++++|+ +.|++.+++. .+++++.+|+.+ +++. ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~~~--~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL------------SGIEHVGGDMFA-SVPQ--GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------------TTEEEEECCTTT-CCCC--EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc------------CCCEEEeCCccc-CCCC--CCEE
Confidence 45689999999999999999987754 7888899 9999876541 358999999987 5543 9999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
++..++||+++++...++++++++|||||++++.|.+.++
T Consensus 272 ~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 272 ILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPE 311 (372)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECS
T ss_pred EEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999999999877789999999999999999999876543
No 142
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.57 E-value=3.2e-15 Score=125.32 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=80.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcC----CCCCCCCCCCcceeEEEcCCCCCCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLA----PENHMAPDMHKATNFFCVPLQDFTPETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 229 (284)
..++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.+.++.. ..+ ..++++.++|+.+++++++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~------~~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG------LPNLLYLWATAERLPPLSG 98 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC------CTTEEEEECCSTTCCSCCC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC------CCceEEEecchhhCCCCCC
Confidence 35678999999999999999998753 379999999999986433322 222 2478999999999887765
Q ss_pred ceeEEEe---cchh--ccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWV---QWCI--GHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~---~~~l--~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+ |.|+. ...+ +|+++. ..+++++.++|||||.+++..
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSS--PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhccH--HHHHHHHHHHcCCCcEEEEEe
Confidence 5 66653 2333 266533 589999999999999999964
No 143
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.57 E-value=3.1e-15 Score=125.94 Aligned_cols=107 Identities=10% Similarity=0.082 Sum_probs=83.6
Q ss_pred CCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C-CC----C
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-PE----T 228 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~ 228 (284)
++.+|||||||+|..+..+++.. ..+|+++|+|+.|++.|++++...++ ..+++++++|+.+. + .. .
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHGGGTTTTSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHHHHHHHHhcCC
Confidence 56799999999999999888643 23799999999999999998876543 34689999997542 2 11 2
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++||+|++....++.. +...++..+ ++|||||+|++.+..
T Consensus 133 ~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred CceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCC
Confidence 6899999988777654 444677777 999999999886543
No 144
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=4.4e-15 Score=129.62 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=87.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|++++...++ ..+++++++|+.++.. +++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhcc-cCCccEEE
Confidence 35789999999999999999987766799999999999999999876554 2358899999998876 57999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+.... ....++.++.++|||||.+++.++.
T Consensus 198 ~~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCch------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 86542 2247899999999999999998764
No 145
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.56 E-value=7.9e-15 Score=130.28 Aligned_cols=102 Identities=21% Similarity=0.202 Sum_probs=85.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||||||+|.++..+++.+.. +|+++|+|+.+++.|++++...++ .++++.++|+.+...++++||
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~~~d~~~~~~~~~~fD 146 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFVCGDGYYGVPEFSPYD 146 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCGGGCCGGGCCEE
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEEECChhhccccCCCeE
Confidence 457789999999999999988876542 599999999999999999865443 358899999987655557899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++..+++|++ +++.++|||||.+++...
T Consensus 147 ~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 147 VIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred EEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 999999999987 357889999999999854
No 146
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=8.3e-15 Score=122.41 Aligned_cols=102 Identities=15% Similarity=0.064 Sum_probs=83.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.+++++...+. .++++.+.|+......+++||
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~~~~fD 148 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVIVGDGTLGYEPLAPYD 148 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEECCcccCCCCCCCee
Confidence 45778999999999999999887763 4799999999999999998754332 358889998854333356899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++..+++|++ +++.++|||||.+++...
T Consensus 149 ~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 149 RIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 999999999987 268899999999999865
No 147
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.56 E-value=5.6e-15 Score=138.23 Aligned_cols=106 Identities=16% Similarity=0.138 Sum_probs=90.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...++ ..+++++.+|+.+++++ ++||+|
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~~~~~~~-~~fD~I 228 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVEEVSLP-EQVDII 228 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECchhhCccC-CCeEEE
Confidence 346789999999999999988876555899999998 99999998876544 35799999999987655 589999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+++.+++|+..++....+.++.++|||||.+++
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999888888766777888899999999999985
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=8e-15 Score=125.95 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=85.2
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC---CCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~f 231 (284)
.++.+|||||||+|..+..++..... +|+++|+|+.+++.|++++...++ .+++++++|+++++.. .++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhhcccccCCCc
Confidence 46789999999999999988876443 799999999999999999876543 3589999999887642 3789
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+|++..+ . ++..+++.+.++|||||.+++...
T Consensus 153 D~I~s~a~----~--~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 153 ARAVARAV----A--PLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEEEEESS----C--CHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred eEEEECCc----C--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999654 2 556899999999999999998653
No 149
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.56 E-value=4.6e-15 Score=120.95 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=85.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.+++++...+. ..++++.+.|+.+.....++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCC-----CcceEEEecCHHHhcccCCCCCEE
Confidence 4577899999999999999888666 6799999999999999998765432 246888998876621112589999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..++++ +..+++++.++|+|||.+++...
T Consensus 105 ~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 105 VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCchHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 99887754 45899999999999999999754
No 150
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.56 E-value=6.9e-15 Score=132.47 Aligned_cols=103 Identities=13% Similarity=0.236 Sum_probs=87.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.+..+|||||||+|.++..+++.++. +++++|+ +.|++.|++. .++++..+|+.+ +.+ .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~~~-~~p--~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------------NNLTYVGGDMFT-SIP--NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------------TTEEEEECCTTT-CCC--CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------------CCcEEEeccccC-CCC--CccEE
Confidence 45679999999999999999987644 7999999 9999877541 348999999976 444 39999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCC---CcEEEEEeccCCC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIARS 274 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~Lkp---GG~lii~e~~~~~ 274 (284)
++.+++||+++++...++++++++||| ||++++.|.+.++
T Consensus 251 ~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 251 LLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred EeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 999999999987777999999999999 9999999976543
No 151
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.56 E-value=9.5e-15 Score=121.23 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=83.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
++.+|||+|||+|..+..++.... .+++++|+|+.+++.+++++...+. .++++.++|+.+++ +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~-~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL------ENIEPVQSRVEEFP-SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC------SSEEEEECCTTTSC-CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEEecchhhCC-ccCCcCEEE
Confidence 367999999999999998887643 3799999999999999998765432 34889999998876 346899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+..+ . +...+++++.++|+|||.+++...
T Consensus 138 ~~~~----~--~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAF----A--SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCS----S--SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred Eecc----C--CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8643 2 556899999999999999999754
No 152
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.56 E-value=7.8e-15 Score=118.60 Aligned_cols=97 Identities=21% Similarity=0.089 Sum_probs=80.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .++++.++|+.+ +.++++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~---------~~~~~~~~d~~~-~~~~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H---------RGGNLVRADLLC-SINQESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C---------SSSCEEECSTTT-TBCGGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c---------cCCeEEECChhh-hcccCCCCEEE
Confidence 356799999999999999888666 79999999999987 1 347899999987 44557999999
Q ss_pred ecchhccCChh-------hHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTDD-------DFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~~-------~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++..+++.++. +...+++++.+.| |||.+++.+..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 99998876543 3457889999999 99999998753
No 153
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=2.9e-14 Score=124.50 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=82.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeC-CHHHHHHHHHHc-----CCCCCCCCCCCcceeEEEcCCCCCC--C-
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP-VSHFLDAARESL-----APENHMAPDMHKATNFFCVPLQDFT--P- 226 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~-S~~~l~~ar~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~--~- 226 (284)
.++.+|||+|||+|.++..++..+..+|+++|+ |+.+++.|++++ ...++.. ....++++...+..+.. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSET-VKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhccccc-CCCCCeEEEEecCCCccHHHH
Confidence 466799999999999999888766558999999 899999999998 4332200 00035777766655431 1
Q ss_pred ---CCCceeEEEecchhccCChhhHHHHHHHHHhcCC---C--CcEEEEE
Q 023288 227 ---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLK---P--GGFFVLK 268 (284)
Q Consensus 227 ---~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~Lk---p--GG~lii~ 268 (284)
++++||+|++..+++|.+ +...+++.+.++|+ | ||.+++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 347899999999999866 67799999999999 9 9987765
No 154
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.55 E-value=1.1e-15 Score=130.83 Aligned_cols=112 Identities=13% Similarity=0.196 Sum_probs=88.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC------C
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------T 228 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~ 228 (284)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.... +
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHhhccCC
Confidence 567999999999999999887543 3799999999999999999876554 35799999998664321 3
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccC
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLL 279 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d 279 (284)
++||+|++... ..+...+++++.++|||||+|++ +++.-.+.+.+
T Consensus 135 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~-d~~~~~g~v~~ 179 (242)
T 3r3h_A 135 HQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAI-DNIFWDGKVID 179 (242)
T ss_dssp SCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEE-ECSSSSSCSSC
T ss_pred CCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEE-ECCccCCcccC
Confidence 78999998654 23567899999999999999888 45454555444
No 155
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.55 E-value=3.7e-14 Score=130.36 Aligned_cols=115 Identities=13% Similarity=-0.017 Sum_probs=87.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHH-------HHHcCCCCCCCCCCCcceeEEEcCCCCC--
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAA-------RESLAPENHMAPDMHKATNFFCVPLQDF-- 224 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~a-------r~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 224 (284)
..++.+|||||||+|.++..++.... .+|+|+|+|+.+++.| ++++...++. ..+++++++|....
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~----~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR----LNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----CCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----CCceEEEEcCcccccc
Confidence 45788999999999999998887543 4799999999999988 7776544310 14688888754321
Q ss_pred CC--CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCc
Q 023288 225 TP--ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGT 276 (284)
Q Consensus 225 ~~--~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~ 276 (284)
++ ..++||+|+++.++ +. +++..+++++.++|||||.|++.+...+..+
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f~p~~~ 366 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSLRSLTY 366 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCSSCTTC
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeeccCCccc
Confidence 11 23689999988766 22 3677899999999999999999987655543
No 156
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.54 E-value=8.1e-15 Score=125.73 Aligned_cols=113 Identities=15% Similarity=0.189 Sum_probs=87.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C-C-----C
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P-----E 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~ 227 (284)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+. + . +
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHHHHHHhccCC
Confidence 567999999999999999987643 3799999999999999999876544 35789999988654 2 1 1
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccCC
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLLS 280 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d~ 280 (284)
+++||+|++... ..+...+++++.++|||||+|++ +++...+.+.++
T Consensus 154 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~-d~~~~~g~v~~~ 200 (247)
T 1sui_A 154 HGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGY-DNTLWNGSVVAP 200 (247)
T ss_dssp TTCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEE-ECTTGGGGGGCC
T ss_pred CCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEE-ecCCcCCcccCC
Confidence 468999998654 22567899999999999999877 454444544443
No 157
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=6e-15 Score=124.82 Aligned_cols=107 Identities=19% Similarity=0.151 Sum_probs=77.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCC-HHHHHHH---HHHcCCCCCCCCCCCcceeEEEcCCCCCCCC-CC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPV-SHFLDAA---RESLAPENHMAPDMHKATNFFCVPLQDFTPE-TG 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S-~~~l~~a---r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 229 (284)
.++.+|||||||+|.++..++..... +|+|+|+| +.|++.| +++....++ .++++.++|+.+++.. .+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v~~~~~d~~~l~~~~~d 96 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL------SNVVFVIAAAESLPFELKN 96 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSEEEECCBTTBCCGGGTT
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCeEEEEcCHHHhhhhccC
Confidence 46789999999999999988865443 79999999 7777776 666554432 4689999999988532 24
Q ss_pred ceeEEEecchhccC---ChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHL---TDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~---~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+|.|++++...+. ...+...++++++++|||||.+++.
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 56666665432211 0012246899999999999999994
No 158
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=120.73 Aligned_cols=102 Identities=15% Similarity=-0.010 Sum_probs=80.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC---CCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~ 229 (284)
..++.+|||+|||+|.++..+++.. . .+|+|+|+|+.|++.+.++... ..++++.++|+.+. +..++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------~~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------RTNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------CTTEEEECSCTTCGGGGGGGCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------cCCeEEEEcccCChhhhcccCC
Confidence 5577899999999999999998763 2 4799999999988777766543 24688999999873 33457
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+||+|++... ..+....++.++.++|||||.+++.
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 8999998655 2223456788999999999999995
No 159
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.7e-14 Score=116.84 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=83.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++. ...+++++|+|+.+++.+++++...++ .++++.++|+.+ ++++++||+|
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~~~~d~~~-~~~~~~~D~i 104 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQIIKGRAED-VLDKLEFNKA 104 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC------CSEEEEESCHHH-HGGGCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC------CcEEEEECCccc-cccCCCCcEE
Confidence 45678999999999999998886 445799999999999999999865432 458899999877 4555789999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++..+ .+...+++++.++ |||.+++...
T Consensus 105 ~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 105 FIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp EECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred EECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 99988 2566899999998 9999999864
No 160
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.53 E-value=2.7e-14 Score=123.41 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=82.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.|+++.. ++.+...|+.++++++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP-----------QVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcchhhCCCCCCceeEE
Confidence 467899999999999999888763 3379999999999999998852 3788999999888777899999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
++..+. .+++++.++|||||.+++.....
T Consensus 153 ~~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 153 IRIYAP---------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEESCC---------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred EEeCCh---------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 987652 35889999999999999987543
No 161
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=2.4e-15 Score=125.01 Aligned_cols=107 Identities=13% Similarity=0.022 Sum_probs=66.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-----C
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-----G 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~ 229 (284)
.++.+|||+|||+|.++..++..+.. +++|+|+|+.|++.|++++...+ .+++++++|+.+ ++++ +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~-~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-------AVVDWAAADGIE-WLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------------CCHHHHHH-HHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-------CceEEEEcchHh-hhhhhhhccC
Confidence 57789999999999999999987644 79999999999999999887642 156777788766 3333 7
Q ss_pred ceeEEEecchhccC------Chhh------------------HHHHHHHHHhcCCCCcEEEEEec
Q 023288 230 RYDVIWVQWCIGHL------TDDD------------------FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~------~~~~------------------~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+||+|+++..+++. +... +..+++++.++|||||.+++.+.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 99999997554332 2111 16889999999999999555443
No 162
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=6.3e-14 Score=118.81 Aligned_cols=104 Identities=13% Similarity=-0.025 Sum_probs=76.8
Q ss_pred ccCCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---CC
Q 023288 153 ARNNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PE 227 (284)
Q Consensus 153 ~~~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~ 227 (284)
....++.+|||+|||+|..+..+++... .+|+++|+|+.|++...+.... ..++.++++|+.... ..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~--------r~nv~~i~~Da~~~~~~~~~ 143 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR--------RPNIFPLLADARFPQSYKSV 143 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH--------CTTEEEEECCTTCGGGTTTT
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh--------cCCeEEEEcccccchhhhcc
Confidence 3467889999999999999998887533 2799999999997655443322 246889999987642 12
Q ss_pred CCceeEEEecchhccCChhhHHH-HHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVS-FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~-~l~~~~r~LkpGG~lii~e 269 (284)
.++||+|++.... + +... +...+.+.|||||.|+++.
T Consensus 144 ~~~~D~I~~d~a~---~--~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 144 VENVDVLYVDIAQ---P--DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CCCEEEEEECCCC---T--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccceEEEEecCCC---h--hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 3689999988653 2 3334 4556667999999999984
No 163
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.53 E-value=1.8e-14 Score=121.17 Aligned_cols=105 Identities=19% Similarity=0.123 Sum_probs=82.7
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC----C-C
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----E-T 228 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~-~ 228 (284)
.++.+|||||||+|..+..++.... .+|+++|+++.+++.|++++...++ ..+++++++|+.+... . .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCC
Confidence 3568999999999999999887643 3799999999999999999876544 3458999999865321 1 1
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++||+|++.... .....+++++.++|||||++++.+.
T Consensus 132 ~~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 132 EPFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 579999987652 3556899999999999997777543
No 164
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=8.3e-15 Score=123.25 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=83.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CC----C
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE----T 228 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~----~ 228 (284)
++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. .. .
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHHHHHHHhhhccCC
Confidence 567999999999999998886532 3799999999999999999876544 345899999885532 11 1
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++||+|++... ..+...+++++.++|||||+|++.+..
T Consensus 139 ~~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 139 WQYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CCccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 68999996554 235678999999999999999986543
No 165
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.52 E-value=2.2e-14 Score=129.84 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=86.4
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
++.+|||||||+|.++...++.+..+|++||.|+ |++.|++.+..+++ ..+++++.++++++.++ .+||+||+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeeeecCC-ccccEEEe
Confidence 5679999999999999977777777999999996 89999998877665 46799999999998776 68999998
Q ss_pred cchhccCChh-hHHHHHHHHHhcCCCCcEEEE
Q 023288 237 QWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 237 ~~~l~~~~~~-~~~~~l~~~~r~LkpGG~lii 267 (284)
.+.-..+..+ .+..++....+.|||||.++-
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 6554433322 577899999999999998875
No 166
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.52 E-value=5.8e-15 Score=133.42 Aligned_cols=111 Identities=15% Similarity=0.188 Sum_probs=85.3
Q ss_pred cHHHHHHHHHhhcCCccCCCCceEEEeecc------ccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCC
Q 023288 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSG------IGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPD 209 (284)
Q Consensus 138 ~~~~l~~~~~~~l~~~~~~~~~~VLDiGcG------tG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~ 209 (284)
...++..++... ..++.+||||||| +|..+..+++.++ .+|+|+|+|+.|. . .
T Consensus 202 y~~~Ye~lL~~l-----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-~------- 262 (419)
T 3sso_A 202 FTPHYDRHFRDY-----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-D------- 262 (419)
T ss_dssp CHHHHHHHHGGG-----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-C-------
T ss_pred HHHHHHHHHHhh-----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-c-------
Confidence 445566655433 2356899999999 7777777776642 2799999999983 1 1
Q ss_pred CCcceeEEEcCCCCCCCC------CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 210 MHKATNFFCVPLQDFTPE------TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 210 ~~~~~~~~~~d~~~~~~~------~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
..+++|+++|+.++++. +++||+|++... |++. +...+|+++.++|||||+|++.|..
T Consensus 263 -~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 263 -ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--HVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp -BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH--HHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred -CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccch--hHHHHHHHHHHhcCCCeEEEEEecc
Confidence 35799999999987665 579999998754 5544 6779999999999999999998865
No 167
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.52 E-value=1.2e-13 Score=116.45 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=81.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---CCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~ 229 (284)
..++.+|||+|||+|.++..++... . .+|+++|+|+.|++.+++++.. ..+++++++|+.+.. ..++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--------~~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--------RRNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--------CTTEEEEECCTTCGGGGTTTCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--------cCCCEEEEccCCCcchhhcccC
Confidence 5577899999999999999988763 2 4799999999999999998875 256899999998732 1235
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+||+|++... .+ .....+++++.++|||||.+++.
T Consensus 143 ~~D~v~~~~~---~~-~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA---QP-TQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC---ST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC---CH-hHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999997655 11 23345599999999999999997
No 168
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.52 E-value=1.5e-14 Score=120.58 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=81.2
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 233 (284)
++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|..+. +..++ ||+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHHHTTCCS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHHhccCCC-CCE
Confidence 457999999999999998886543 3799999999999999998765432 34689999988654 33345 999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|++... ..+...+++++.++|||||.+++.+
T Consensus 130 v~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 130 LFMDCD-----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEETT-----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEcCC-----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 998743 2356789999999999999988744
No 169
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.51 E-value=3e-14 Score=121.87 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=82.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCC--CCcceeEEEcCCCC-CC--CCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPD--MHKATNFFCVPLQD-FT--PETG 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~--~~~~~~~~~~d~~~-~~--~~~~ 229 (284)
.++.+|||||||+|.++..++..+.. .|+|+|+|+.+++.+++++......+.. ...+++++++|+.+ ++ ++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 46789999999999999999987754 7999999999999998876432000000 02468999999987 44 5678
Q ss_pred ceeEEEecchhccCChh------hHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDD------DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~------~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++|.|++...-.+.... -...+++++.++|+|||.|++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 99999855321111000 0147999999999999999995
No 170
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=4.9e-14 Score=122.58 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=85.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHcCCC-CCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~ar~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (284)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++... + ..++++.++|+.+ ++++++|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~-~~~~~~f 180 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD------IGNVRTSRSDIAD-FISDQMY 180 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC------CTTEEEECSCTTT-CCCSCCE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC------CCcEEEEECchhc-cCcCCCc
Confidence 567789999999999999998876 2 237999999999999999998654 3 2468899999987 4455789
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+|++ +++ +...+++++.++|||||.+++....
T Consensus 181 D~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 181 DAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp EEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred cEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99998 444 3348999999999999999998653
No 171
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=2.4e-14 Score=121.31 Aligned_cols=104 Identities=13% Similarity=0.212 Sum_probs=84.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCC--CCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPE--TGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~--~~~f 231 (284)
.++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...+. ..++++.++|+.+. +.. +++|
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~f 127 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL-----ESRIELLFGDALQLGEKLELYPLF 127 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGSHHHHTTSCCE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhcccCCCc
Confidence 3567999999999999999887753 4799999999999999999865443 24688999998774 221 4689
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|++....+ +...+++++.++|+|||.+++.+
T Consensus 128 D~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 128 DVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred cEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 9999987743 56689999999999999999864
No 172
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.51 E-value=6.7e-15 Score=118.10 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=80.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--C--CCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P--ETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~~fD 232 (284)
++.+|||+|||+|.++..++..+.. |+|+|+|+.|++.|++++...+ .+++++++|+.+.. . ..++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTG-------LGARVVALPVEVFLPEAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHT-------CCCEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcC-------CceEEEeccHHHHHHhhhccCCceE
Confidence 5679999999999999999877665 9999999999999999876432 15788999887632 1 124799
Q ss_pred EEEecchhccCChhhHHHHHHHHH--hcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAK--VGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~--r~LkpGG~lii~e~~ 271 (284)
+|+++.+++ . ....+++.+. ++|+|||.+++....
T Consensus 113 ~i~~~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYA--M--DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 999998776 2 2235666666 999999999997553
No 173
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.51 E-value=3.1e-14 Score=121.26 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=88.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--C-----C
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P-----E 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~-----~ 227 (284)
++.+|||||||+|..+..+++... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. . +
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhccCC
Confidence 567999999999999999987643 3899999999999999999876544 356899999876531 1 2
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccCC
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLLS 280 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d~ 280 (284)
+++||+|++... ..+...+++++.++|+|||.+++ +++...+.+.++
T Consensus 145 ~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~-d~~~~~g~~~~~ 191 (237)
T 3c3y_A 145 EGSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAY-DNTLWGGTVAQP 191 (237)
T ss_dssp TTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEE-ECTTGGGGGGSC
T ss_pred CCCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEE-ecCCcCCccCCC
Confidence 468999998643 23567899999999999998876 555555555443
No 174
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.51 E-value=4.3e-14 Score=119.97 Aligned_cols=101 Identities=18% Similarity=0.167 Sum_probs=82.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (284)
..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.|++++...++ .++++..+|+ ..++++ .+||+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~d~-~~~~~~~~~fD~ 161 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV------KNVHVILGDG-SKGFPPKAPYDV 161 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCG-GGCCGGGCCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEEECCc-ccCCCCCCCccE
Confidence 456789999999999999988877635699999999999999998765442 3588899987 233333 35999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|++..+++++++ ++.+.|||||.+++.-.
T Consensus 162 Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 162 IIVTAGAPKIPE--------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEECSBBSSCCH--------HHHHTEEEEEEEEEEEC
T ss_pred EEECCcHHHHHH--------HHHHhcCCCcEEEEEEe
Confidence 999999998872 57889999999999755
No 175
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.50 E-value=2.2e-14 Score=125.37 Aligned_cols=96 Identities=14% Similarity=0.023 Sum_probs=72.9
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCccee-EEEcCCCCCC---CCCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN-FFCVPLQDFT---PETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~-~~~~d~~~~~---~~~~~fD 232 (284)
++.+|||+|||||.++..+++.+..+|+|+|+|+.|++.+.++.. ++. +...++..+. ++..+||
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~-----------rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD-----------RVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT-----------TEEEECSCCGGGCCGGGCTTCCCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc-----------ccceecccCceecchhhCCCCCCC
Confidence 567999999999999998888877689999999999998654321 111 1122332222 2334699
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|++..+++++ ..++.++.++|||||.+++.
T Consensus 154 ~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 99998888765 37999999999999999987
No 176
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=3.9e-14 Score=123.27 Aligned_cols=107 Identities=18% Similarity=0.196 Sum_probs=84.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||+|||+|.++..++.... .+|+++|+|+.+++.+++++...+. .++++.++|+.+. .++++||+|
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d~~~~-~~~~~fD~I 180 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSDWFSA-LAGQQFAMI 180 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCSTTGG-GTTCCEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcchhhh-cccCCccEE
Confidence 3567999999999999999886643 3799999999999999998765432 3588999998764 335689999
Q ss_pred Eecch-------------hccCCh----------hhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWC-------------IGHLTD----------DDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~-------------l~~~~~----------~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+++.. ++|-+. .....+++++.++|+|||++++..
T Consensus 181 v~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 181 VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp EECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99843 333321 245789999999999999999863
No 177
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=1.3e-14 Score=124.96 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=83.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+. . +++.++|+.+. +++++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~------~-v~~~~~d~~~~-~~~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGV------R-PRFLEGSLEAA-LPFGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTC------C-CEEEESCHHHH-GGGCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChhhc-CcCCCCCEEE
Confidence 3678999999999999998887666 799999999999999998765432 1 77888887652 3346899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
++...+ .+..++.++.++|||||.+++++..
T Consensus 190 ~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 190 ANLYAE-----LHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeec
Confidence 976554 3558999999999999999998643
No 178
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.50 E-value=4.8e-14 Score=120.91 Aligned_cols=103 Identities=21% Similarity=0.171 Sum_probs=84.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|++++...++ ..++++.+.|+.+. +++++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEECSCGGGC-CCCCSEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEEECchhhc-cCCCCcC
Confidence 567889999999999999999887 3 34799999999999999999865443 23489999998865 4567899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++. .+ +...+++++.++|+|||.+++...
T Consensus 165 ~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 165 HVILD-----LP--QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp EEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99984 33 334799999999999999999764
No 179
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.49 E-value=6.3e-14 Score=123.14 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=80.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~ 233 (284)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++...+.. .....+++++.+|+.++. ..+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSS-CTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccc-cccCCceEEEEChHHHHHhhcCCCccE
Confidence 356899999999999999888653 347999999999999999987531100 000347899999987753 34578999
Q ss_pred EEecchhccCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~e 269 (284)
|++.......+...+ ..+++.+.++|+|||++++.-
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999665443333223 689999999999999999863
No 180
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=4.5e-14 Score=113.32 Aligned_cols=101 Identities=13% Similarity=0.123 Sum_probs=81.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+|||+|||+|.++..+++.. . .+++++|+|+ |++. .++++.+.|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccccchhhhhhhc
Confidence 3567799999999999999988773 3 4899999998 7531 35788999998875
Q ss_pred -CCCCceeEEEecchhccCChhh---------HHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDD---------FVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~---------~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+++++||+|+++.++++..... ...+++++.++|+|||.+++.+...
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 5667999999999888776331 1589999999999999999976543
No 181
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.49 E-value=4.6e-14 Score=127.34 Aligned_cols=101 Identities=14% Similarity=0.271 Sum_probs=86.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
+..+|||||||+|.++..+++.++. +++++|+ +.+++.+++ ..++++..+|+.+ +.+ +||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------------NENLNFVGGDMFK-SIP--SADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------------CSSEEEEECCTTT-CCC--CCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------------CCCcEEEeCccCC-CCC--CceEEE
Confidence 5579999999999999999987654 7999999 788876653 1348999999987 544 499999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCC---CcEEEEEeccCC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKP---GGFFVLKENIAR 273 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~Lkp---GG~lii~e~~~~ 273 (284)
+..++||+++++...+++++.++|+| ||++++.|.+.+
T Consensus 257 ~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 257 LKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred EcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 99999999987788999999999999 999999997654
No 182
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=3.8e-14 Score=120.29 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=85.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC----CCCC--
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPET-- 228 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~-- 228 (284)
++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..++++.++|+.+. +.++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 457999999999999998886543 3799999999999999998765443 34688999986542 2222
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCcccC
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFLL 279 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~d 279 (284)
++||+|++... ..+...+++++.++|+|||+|++.+ +...+.+.+
T Consensus 147 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~-~~~~g~~~~ 191 (232)
T 3cbg_A 147 PEFDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDN-VLWHGKVTE 191 (232)
T ss_dssp CCEEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEEC-TTGGGGGGC
T ss_pred CCcCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeC-CCcCCccCC
Confidence 68999998654 2366789999999999999998854 444444443
No 183
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.49 E-value=1.6e-14 Score=123.04 Aligned_cols=104 Identities=10% Similarity=0.109 Sum_probs=83.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C-------
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------- 225 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~------- 225 (284)
.++.+|||||||+|..+..++.... .+|+++|+|+.+++.|++++...+. ..++++.++|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHCSS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHHHHHHHhhcc
Confidence 3567999999999999999987753 4899999999999999999865443 24588999887542 1
Q ss_pred -------CCC--CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -------PET--GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -------~~~--~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+++ ++||+|++.... ++...+++++.++|+|||.+++.+
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 122 689999987553 356689999999999999999864
No 184
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=6.3e-14 Score=123.74 Aligned_cols=107 Identities=21% Similarity=0.277 Sum_probs=83.4
Q ss_pred CceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCceeEE
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRYDVI 234 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~I 234 (284)
+.+|||||||+|.++..+++.+.. +|++||+++.|++.|++++.... ..+++++.+|..++. .++++||+|
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~------~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR------APRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC------TTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC------CCceEEEECcHHHHHhhccCCCCCEE
Confidence 359999999999999999875433 79999999999999999986421 357899999987652 345789999
Q ss_pred EecchhccCChhhH--HHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++....+......+ ..++++++++|+|||+|++.-.
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 98654432221222 5899999999999999988643
No 185
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.48 E-value=1.8e-14 Score=122.47 Aligned_cols=100 Identities=18% Similarity=0.032 Sum_probs=68.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~I 234 (284)
.++.+|||||||||.++..+++.+..+|+|+|+|+.|++.++++....... ...++.+.. .++....+...+||++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVM---EQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEE---CSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcccccc---ccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 356799999999999999999886668999999999999988765421000 001222222 2332211222355555
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+++ + ..+++++.++|||||.+++.
T Consensus 113 ~~~-----l-----~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 113 FIS-----L-----DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SSC-----G-----GGTHHHHHHHSCTTCEEEEE
T ss_pred hhh-----H-----HHHHHHHHHhccCCCEEEEE
Confidence 443 2 37999999999999999986
No 186
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=1.2e-14 Score=117.76 Aligned_cols=90 Identities=13% Similarity=0.165 Sum_probs=77.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC---CCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~f 231 (284)
..++.+|||+|||. +++|+|+.|++.|+++... ++++.++|+.++++ ++++|
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN----------EGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGGGGCCCSSCE
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc----------CcEEEEechhcCccccCCCCCE
Confidence 56789999999996 2399999999999998643 37899999998876 67899
Q ss_pred eEEEecchhccC-ChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 232 DVIWVQWCIGHL-TDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 232 D~Iv~~~~l~~~-~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+|+++.++||+ + +...++++++++|||||+|++.+..
T Consensus 65 D~V~~~~~l~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTL--HSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCC--CCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECChhhhccc--CHHHHHHHHHHHCCCCEEEEEEccc
Confidence 999999999999 6 5569999999999999999997553
No 187
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.48 E-value=3.1e-14 Score=125.77 Aligned_cols=112 Identities=15% Similarity=0.178 Sum_probs=81.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC--CCCcee
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--ETGRYD 232 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~fD 232 (284)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++..... .....+++++.+|+.++.. .+++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR--SLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc--ccCCCcEEEEECcHHHHHHhccCCcee
Confidence 456899999999999999888553 34899999999999999998731000 0013568999999877542 357899
Q ss_pred EEEecchhccCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023288 233 VIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~e 269 (284)
+|++....++.+...+ ..+++++.++|||||++++..
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9999776655443333 589999999999999999964
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=4.6e-14 Score=118.90 Aligned_cols=107 Identities=20% Similarity=0.175 Sum_probs=83.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC------CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~------~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--- 225 (284)
..++.+|||||||+|.++..++.... .+|+++|+|+.+++.|++++...++... ...++++.++|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELL-KIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGG-SSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcccc-ccCCEEEEECChHhccccc
Confidence 45678999999999999998887654 2799999999999999998754321000 0136889999988754
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
...++||+|++...++++. +++.++|||||++++.-.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEc
Confidence 4457899999999888754 667899999999999743
No 189
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=7.8e-14 Score=119.53 Aligned_cols=104 Identities=22% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHcCCC-CCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPE-NHMAPDMHKATNFFCVPLQDFTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~ar~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (284)
..++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|++++... + ..++++...|+.+.++++++|
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g------~~~v~~~~~d~~~~~~~~~~~ 167 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ------VENVRFHLGKLEEAELEEAAY 167 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC------CCCEEEEESCGGGCCCCTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC------CCCEEEEECchhhcCCCCCCc
Confidence 457789999999999999999877 3 347999999999999999987542 2 246889999998876666799
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+|++. .+ +...+++++.++|+|||.+++.+..
T Consensus 168 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 168 DGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp EEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred CEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999983 34 3347999999999999999998753
No 190
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.47 E-value=2.4e-13 Score=115.82 Aligned_cols=103 Identities=22% Similarity=0.284 Sum_probs=84.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++....++ ..++++...|+.+...++++||+|
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~D~v 162 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNVDFKDAEVPEGIFHAA 162 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECSCTTTSCCCTTCBSEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEcChhhcccCCCcccEE
Confidence 457789999999999999999877 55799999999999999998765432 256889999998755355689999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++. .+ +...+++++.++|+|||.+++...
T Consensus 163 ~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 163 FVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp EEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 984 33 334789999999999999999765
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.46 E-value=1.9e-13 Score=112.89 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=75.2
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++.. +++++++|+.+++ ++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC---CCeeEEE
Confidence 4667999999999999998887755579999999999999999864 4789999998864 6899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
++..++++.......+++++.+.+ |+ +++.
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE--EE-EEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 999999987544457899999998 55 4443
No 192
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=2.4e-13 Score=122.51 Aligned_cols=110 Identities=19% Similarity=0.097 Sum_probs=88.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..++... . .+++|+|+|+.|++.|++++...++ . ++++.+.|+.+++.+..+||
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~-~i~~~~~D~~~~~~~~~~~D 274 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----S-WIRFLRADARHLPRFFPEVD 274 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----T-TCEEEECCGGGGGGTCCCCS
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----C-ceEEEeCChhhCccccCCCC
Confidence 4567899999999999999988765 2 3699999999999999999877554 2 68999999999876667899
Q ss_pred EEEecchhccCCh--h----hHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTD--D----DFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~--~----~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|+++..+..... . ....+++++.++|||||.+++...
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999766543211 1 136799999999999999999743
No 193
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=6.4e-14 Score=121.81 Aligned_cols=105 Identities=18% Similarity=0.108 Sum_probs=87.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++.... .+|+++|+|+.+++.|++++...++ .++.++++|+.+++ ..++||+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~~~d~~~~~-~~~~~D~ 189 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL------NNVIPILADNRDVE-LKDVADR 189 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC------SSEEEEESCGGGCC-CTTCEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEECChHHcC-ccCCceE
Confidence 34678999999999999999887743 3799999999999999999876543 35789999998873 3568999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
|++.... ....++.++.+.|+|||.++++++..
T Consensus 190 Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCcc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9988664 33478999999999999999987754
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.46 E-value=5.2e-14 Score=121.89 Aligned_cols=107 Identities=15% Similarity=0.024 Sum_probs=76.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEE--EcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+++.. ........++.++ ++|+.+++ +++||
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~----~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVP----RITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCC----CCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhh----hhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 457789999999999999987755 5699999998 643322111 0000112268888 89998876 57899
Q ss_pred EEEecchhccCChhh---H--HHHHHHHHhcCCCCc--EEEEEecc
Q 023288 233 VIWVQWCIGHLTDDD---F--VSFFKRAKVGLKPGG--FFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~---~--~~~l~~~~r~LkpGG--~lii~e~~ 271 (284)
+|+|..+ ++.+... . ..++..+.++||||| .|++....
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999877 4443211 1 137899999999999 99997654
No 195
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.46 E-value=7.2e-14 Score=118.99 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=77.5
Q ss_pred CCceEEEeeccccHHHHHHHHh----C-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC---CC-C
Q 023288 157 QHLVALDCGSGIGRITKNLLIR----Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TP-E 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~----~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~ 227 (284)
++.+|||||||+|..+..+++. + ..+|+++|+|+.|++.|+.. ..+++++++|+.+. +. .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~-----------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD-----------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-----------CTTEEEEECCSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-----------CCceEEEECcchhHHHHHhhc
Confidence 4579999999999999988875 2 23799999999999888721 24689999999884 43 3
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHh-cCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKV-GLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r-~LkpGG~lii~e 269 (284)
..+||+|++... |. +...++.++.+ +|||||+|++.+
T Consensus 150 ~~~fD~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 347999998665 32 56689999997 999999999965
No 196
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=4.4e-13 Score=117.23 Aligned_cols=105 Identities=12% Similarity=0.032 Sum_probs=80.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCce---eE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY---DV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f---D~ 233 (284)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++ ..+++++++|+.+.. + ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l-----~~~v~~~~~D~~~~~-~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV-----SDRFFVRKGEFLEPF-K-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTSEEEEESSTTGGG-G-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECcchhhc-c-cccCCCCE
Confidence 4569999999999999999877223799999999999999999876543 235899999998732 2 478 99
Q ss_pred EEecchhc-----------cCCh------hhHHHHHHHHH-hcCCCCcEEEEE
Q 023288 234 IWVQWCIG-----------HLTD------DDFVSFFKRAK-VGLKPGGFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~-----------~~~~------~~~~~~l~~~~-r~LkpGG~lii~ 268 (284)
|+++.... |-+. .+...+++++. +.|+|||++++.
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99973221 2221 11227899999 999999999983
No 197
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=2e-13 Score=112.63 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=76.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC---CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~---~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
.++.+|||+|||+|.++..+++... .+|+|+|+|+.. . ..++++.++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~--------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P--------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C--------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C--------CCCceEEEccccchhhhhhccc
Confidence 4678999999999999999987754 479999999821 1 245788999998865
Q ss_pred ------------------CCCCceeEEEecchhccCCh--hh-------HHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 ------------------PETGRYDVIWVQWCIGHLTD--DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 ------------------~~~~~fD~Iv~~~~l~~~~~--~~-------~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+++++||+|++..++++... .+ ...+++++.++|||||.|++...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 45579999999888776421 11 12488999999999999998543
No 198
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.46 E-value=1.3e-13 Score=116.12 Aligned_cols=107 Identities=20% Similarity=0.191 Sum_probs=83.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-C-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-F-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|..+..++... . .+|+++|+|+.+++.+++++...+.... ...++++.+.|+.......++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-SSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-HTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc-CCCcEEEEECCcccCcccCCCcC
Confidence 4567899999999999999888764 3 3799999999999999988754221000 01368899999876555557899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++...++++. +++.++|||||.+++...
T Consensus 154 ~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 154 AIHVGAAAPVVP--------QALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEECSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCchHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 999998887655 468899999999999754
No 199
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=5.5e-14 Score=118.53 Aligned_cols=112 Identities=20% Similarity=0.215 Sum_probs=85.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CC----
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PE---- 227 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~---- 227 (284)
.++.+|||+|||+|..+..++.... .+|+++|+|+.+++.|++++...++ ..+++++++|+.+.. ..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcCC
Confidence 3567999999999999998886532 3799999999999999999865443 356899999875531 11
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCCCccc
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARSGTFL 278 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~~~~~ 278 (284)
.++||+|++... ..+...+++++.++|+|||.+++.+ +.-.+.+.
T Consensus 143 ~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~-~~~~g~~~ 187 (229)
T 2avd_A 143 AGTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLR-VLWRGKVL 187 (229)
T ss_dssp TTCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEEC-CSGGGGGG
T ss_pred CCCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEEC-CCcCCccc
Confidence 168999998654 2356689999999999999988854 33334333
No 200
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.45 E-value=1.7e-13 Score=115.59 Aligned_cols=106 Identities=16% Similarity=0.011 Sum_probs=87.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||||||+|.++..++..+.. +|+++|+++.+++.|++++...++ ..++++.++|+.+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECchhhccccccccCEE
Confidence 46789999999999999998877644 799999999999999999987665 356999999987765443479999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++.++.. +-+..++......|+++|+|+++-+
T Consensus 95 viaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 95 TICGMGG----RLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEeCCch----HHHHHHHHHHHHHhCcCCEEEEECC
Confidence 8766543 2566889999999999999999754
No 201
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.45 E-value=2e-13 Score=118.55 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=84.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCC-C-CCCCCCCcceeEEEcCCCCCCCCCCc
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPE-N-HMAPDMHKATNFFCVPLQDFTPETGR 230 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~-~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 230 (284)
..++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++... + + ..++++.++|+.+.++++++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----~~~v~~~~~d~~~~~~~~~~ 171 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----PDNWRLVVSDLADSELPDGS 171 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----CTTEEEECSCGGGCCCCTTC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----CCcEEEEECchHhcCCCCCc
Confidence 4577899999999999999998752 337999999999999999987542 1 1 24688999999887776779
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
||+|++. ++ +...+++++.++|+|||.+++...
T Consensus 172 ~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 172 VDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred eeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9999983 33 333799999999999999999764
No 202
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.45 E-value=7.2e-14 Score=124.86 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=84.9
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC----CCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~fD 232 (284)
++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|++++...++. ..+++++++|+.++... .++||
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHHHHHHHHHhcCCCce
Confidence 567999999999999999987776 7999999999999999998654431 11488999998765321 46899
Q ss_pred EEEecchhccCC--------hhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 233 VIWVQWCIGHLT--------DDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 233 ~Iv~~~~l~~~~--------~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+|++........ .++...+++++.++|+|||.|++...+.
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 999954311110 2256789999999999999988865543
No 203
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.45 E-value=6.7e-14 Score=118.11 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=81.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-------~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 227 (284)
..++.+|||+|||+|.++..+++... .+|+++|+++.+++.|++++...+.... ...++++.++|+.+....
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-DSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-HHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc-CCCceEEEECCcccCCCc
Confidence 45678999999999999998887433 3799999999999999988653210000 013588999998762222
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.++||+|++..+++++. +++.+.|||||++++.-.
T Consensus 161 ~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 36899999999998876 568899999999999754
No 204
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.44 E-value=1.3e-14 Score=124.43 Aligned_cols=108 Identities=13% Similarity=-0.033 Sum_probs=75.1
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC---CCC---CC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF---TPE---TG 229 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~ 229 (284)
++.+|||+|||+|.++..++... ..+|+|+|+|+.|++.|++++...++ ..+++++++|+.+. +++ ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcchhhhhhhhhhcccCC
Confidence 56799999999999999888764 24799999999999999999876543 23589999997662 233 25
Q ss_pred ceeEEEecchhccCCh-------------hhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCIGHLTD-------------DDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~-------------~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+||+|+++..+++... +....++.++.++|||||.+.+.+
T Consensus 140 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 140 IYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp CBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred cccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 8999999976654430 112245677778888887766543
No 205
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.44 E-value=1.9e-13 Score=118.83 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=85.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-C-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-Y-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|++++...++ ..++++...|+.+. +++++||
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~-~~~~~~D 183 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDISEG-FDEKDVD 183 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCGGGC-CSCCSEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHHc-ccCCccC
Confidence 457789999999999999999887 3 24899999999999999998765432 25688999998876 4556899
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|++. .+ +...+++++.++|+|||.+++.+..
T Consensus 184 ~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 184 ALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99984 33 3347999999999999999998653
No 206
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.43 E-value=2.8e-13 Score=114.08 Aligned_cols=105 Identities=16% Similarity=0.051 Sum_probs=84.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CCCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~ 233 (284)
.++.+|||||||+|.++..++..+.. +|+++|+++.+++.|++++...++ ..++++.++|..+ ++. ..+||+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~l~~l~~-~~~~D~ 87 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANGLAAFEE-TDQVSV 87 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCG-GGCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECchhhhccc-CcCCCE
Confidence 46789999999999999998876644 799999999999999999987665 3468999999854 332 126999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+..++- .+-+..++..+...|+|+|+|++.-+
T Consensus 88 IviaG~G----g~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 88 ITIAGMG----GRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEEEC----HHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEEcCCC----hHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 9976652 22467899999999999999999644
No 207
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=2.5e-13 Score=115.55 Aligned_cols=106 Identities=11% Similarity=-0.018 Sum_probs=86.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||||||+|.++..++..+.. +|+++|+++.+++.|++++...++ ..++++.++|+.+...+..+||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~l~~~~~~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNGLAVIEKKDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecchhhccCccccccEE
Confidence 46789999999999999988877644 799999999999999999887665 346899999987755443369999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++.++.. +-+..++....+.|+++|+|++.-+
T Consensus 95 viagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 95 VIAGMGG----TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp EEEEECH----HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 9765532 3566899999999999999999754
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.43 E-value=7.8e-14 Score=121.85 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=80.4
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCC--CCC---CCCCCcceeEEEcCCCCCCCCCCce
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHM---APDMHKATNFFCVPLQDFTPETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~--~~~---~~~~~~~~~~~~~d~~~~~~~~~~f 231 (284)
++.+|||||||+|..+..+++....+|+++|+++.+++.|++++ .. ++. ......+++++.+|+.++...+++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 56799999999999999988663448999999999999999998 32 110 0001356899999875531114689
Q ss_pred eEEEecchhccCChhhH--HHHHHHHHhcCCCCcEEEEE
Q 023288 232 DVIWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~ 268 (284)
|+|++....+..+...+ ..+++++.++|+|||.+++.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99998665332221222 57999999999999999986
No 209
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.43 E-value=2.2e-13 Score=120.86 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=84.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.+++++...++ .++++++.|+.+++..+++||
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGGGCCCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhcccccccCC
Confidence 56778999999999999999987643 3799999999999999999865443 368899999888764456899
Q ss_pred EEEecc------hhccCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEec
Q 023288 233 VIWVQW------CIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 233 ~Iv~~~------~l~~~~~-------~~-------~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|++.. ++++.++ .+ ...+++++.++|||||.++++..
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 999742 3333221 11 25899999999999999999643
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.42 E-value=2.1e-13 Score=121.89 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=82.1
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCC--CCCCCCCCcceeEEEcCCCCC--CCCCCc
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF--TPETGR 230 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~--~~~~~~~~~~~~~~~~d~~~~--~~~~~~ 230 (284)
.++.+|||||||+|..+..+++.. ..+|+++|+|+.|++.|++++... ++ ...+++++++|+.++ ..++++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl----~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY----EDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc----CCCcEEEEECCHHHHHHhccCCC
Confidence 456899999999999999888653 248999999999999999987421 11 024689999997664 223578
Q ss_pred eeEEEecchhccCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023288 231 YDVIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~--~~~~l~~~~r~LkpGG~lii~ 268 (284)
||+|++.......+.+. ...+++++.++|+|||+|++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99999865422111112 368999999999999999996
No 211
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.42 E-value=1.6e-13 Score=119.47 Aligned_cols=107 Identities=11% Similarity=0.006 Sum_probs=76.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEE--EcCCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF--CVPLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~fD 232 (284)
..++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..++++... ......++.++ ++|+.+++ +++||
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~----~~~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRL----VETFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCC----CCCTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhh----hhhcCCCeEEEeccCcHhhCC--CCCcC
Confidence 457789999999999999988765 5699999998 64433222100 00112268888 88998865 57899
Q ss_pred EEEecchhccCChhh---H--HHHHHHHHhcCCCCc--EEEEEecc
Q 023288 233 VIWVQWCIGHLTDDD---F--VSFFKRAKVGLKPGG--FFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~---~--~~~l~~~~r~LkpGG--~lii~e~~ 271 (284)
+|+|..+ ++.+... . ..+++.+.++||||| .|++....
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999877 4433211 1 137899999999999 99986554
No 212
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.41 E-value=7.4e-13 Score=118.39 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=79.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CC-CcEEEEeCCHHHHHHHHHHcCCCC----CCCC-CCCcceeEEEcCCCCC--C
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YF-NEVDLLEPVSHFLDAARESLAPEN----HMAP-DMHKATNFFCVPLQDF--T 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~-~~v~gvD~S~~~l~~ar~~~~~~~----~~~~-~~~~~~~~~~~d~~~~--~ 225 (284)
..++.+|||+|||+|.++..++.. +. .+|+++|+++.+++.|++++...+ +... ....++++..+|+.+. +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 457789999999999999998876 44 479999999999999999875311 0000 0024689999999886 3
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+++++||+|++... ....++.++.++|||||.+++...
T Consensus 183 ~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 183 IKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -----EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred cCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 45678999998543 112488999999999999998754
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=2.5e-13 Score=118.28 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=82.0
Q ss_pred CCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCC--CCCCCCCCcceeEEEcCCCCC-CCCCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD 232 (284)
.+.+|||||||+|..+..+++. ...+|+++|+++.+++.|++++... ++ ...+++++.+|+.++ +..+++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~----~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL----DDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT----TSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCee
Confidence 5679999999999999988865 2358999999999999999987321 11 035789999998663 22346899
Q ss_pred EEEecchhccCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~--~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|++....+..+... ...+++++.++|+|||.+++.
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999965543322111 247999999999999999986
No 214
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=1.5e-12 Score=107.92 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=82.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.+++++...+ .+++++++|+.+++ ++||+|
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~d~~~~~---~~~D~v 116 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK-------GKFKVFIGDVSEFN---SRVDIV 116 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-------TSEEEEESCGGGCC---CCCSEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC-------CCEEEEECchHHcC---CCCCEE
Confidence 34678999999999999999887766679999999999999999986532 16889999998864 489999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+++..+++........+++++.+++ ||.+++
T Consensus 117 ~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 117 IMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp EECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred EEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 9999888776445567899999998 554444
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.40 E-value=2.6e-13 Score=118.61 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=84.1
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~ 233 (284)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...+.. ....+++++.+|+.++. ..+++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~--~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccc--cCCCcEEEEECChHHHHHhCCCCceE
Confidence 356899999999999999888553 348999999999999999998643110 01357899999986642 22468999
Q ss_pred EEecchhccCChhhH--HHHHHHHHhcCCCCcEEEEE
Q 023288 234 IWVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~ 268 (284)
|++....++.+...+ ..+++++.++|+|||.+++.
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998654433333333 68999999999999999986
No 216
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.40 E-value=2.3e-13 Score=120.74 Aligned_cols=110 Identities=15% Similarity=0.254 Sum_probs=83.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCC--CC-CCCCCCCcceeEEEcCCCCC-CCCCCc
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--EN-HMAPDMHKATNFFCVPLQDF-TPETGR 230 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~--~~-~~~~~~~~~~~~~~~d~~~~-~~~~~~ 230 (284)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++.. .+ + ...+++++.+|+.++ +..+++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF----DDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG----GCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc----cCCceEEEEchHHHHHHhcCCC
Confidence 356799999999999999888653 34899999999999999998642 11 0 025689999998764 223578
Q ss_pred eeEEEecchhcc---CChhh--HHHHHHHHHhcCCCCcEEEEEe
Q 023288 231 YDVIWVQWCIGH---LTDDD--FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 231 fD~Iv~~~~l~~---~~~~~--~~~~l~~~~r~LkpGG~lii~e 269 (284)
||+|++....+. -+... ...+++++.++|||||.+++.-
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999766544 21112 3689999999999999999863
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=1.6e-13 Score=121.61 Aligned_cols=111 Identities=20% Similarity=0.245 Sum_probs=79.2
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~I 234 (284)
.+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++..... .....+++++.+|+.++ +..+++||+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~--~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSC--GFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSG--GGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 55799999999999999888653 24899999999999999999865210 00035689999988663 2234689999
Q ss_pred EecchhccCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~e 269 (284)
++...-+.-+...+ ..+++++.++|+|||++++..
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98654322222222 689999999999999999863
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.39 E-value=2.2e-13 Score=121.15 Aligned_cols=111 Identities=22% Similarity=0.269 Sum_probs=82.1
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~I 234 (284)
++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.... +.....+++++++|+.++ +..+++||+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~--~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS--CGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS--GGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 56799999999999999888553 3489999999999999999986521 000025689999997653 2224689999
Q ss_pred EecchhccCChhhH--HHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDF--VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~--~~~l~~~~r~LkpGG~lii~e 269 (284)
++...-..-+...+ ..+++++.++|+|||.+++.-
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 98653221111222 689999999999999999853
No 219
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.39 E-value=8.9e-13 Score=119.66 Aligned_cols=103 Identities=10% Similarity=0.043 Sum_probs=83.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CCC-CCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTP-ETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~fD~ 233 (284)
++.+|||+| |+|.++..++..+. .+|+++|+|+.|++.|++++...++ .+++++++|+.+ ++. .+++||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY------EDIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC------CCEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCEEEEEChhhhhchhhccCCccE
Confidence 568999999 99999999887766 4899999999999999999875443 268999999988 553 3468999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+++..++.. ....+++++.++|||||.+++.+
T Consensus 245 Vi~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 245 FITDPPETLE---AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEECCCCchH---HHHHHHHHHHHHcccCCeEEEEE
Confidence 9998765543 24789999999999999543333
No 220
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.39 E-value=1.9e-13 Score=120.70 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=80.1
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCC--CCCCCCCCCcceeEEEcCCCCC-CCCCCce
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~f 231 (284)
..+.+|||||||+|..+..+++... .+|+++|+++.+++.|++++.. .++ ...+++++.+|+.++ +..+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~----~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY----SSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc----CCCcEEEEECcHHHHHhhCCCCc
Confidence 3568999999999999998886532 4899999999999999998643 111 025689999997653 2335789
Q ss_pred eEEEecchhccCChh--hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDD--DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~--~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|++....+..+.. ....+++++.++|+|||.|++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999986554322211 12478999999999999999864
No 221
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.38 E-value=1.5e-12 Score=113.82 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=78.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++..+. +|+++|+|+.|++.+++++...+. ..+++++++|+.+++++ +||+|
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~D~~~~~~~--~fD~v 97 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPV-----ASKLQVLVGDVLKTDLP--FFDTC 97 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEESCTTTSCCC--CCSEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEEcceecccch--hhcEE
Confidence 45678999999999999999997765 699999999999999999865432 25789999999887654 79999
Q ss_pred EecchhccCChhhHHHHH--------------HHH--HhcCCCCcEEE
Q 023288 235 WVQWCIGHLTDDDFVSFF--------------KRA--KVGLKPGGFFV 266 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l--------------~~~--~r~LkpGG~li 266 (284)
+++..++..+ +.+..++ +++ +++|+|||.++
T Consensus 98 v~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9976554432 1222222 233 36899999764
No 222
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.38 E-value=3.5e-13 Score=117.19 Aligned_cols=110 Identities=13% Similarity=0.018 Sum_probs=84.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC----CC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ET 228 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~ 228 (284)
..++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...++ .++++.+.|+.+++. ..
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHHHHHTT
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchhhhhcc
Confidence 4577899999999999999888743 24799999999999999999876543 368899999877643 24
Q ss_pred CceeEEEecchhccC---C------h-------hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 229 GRYDVIWVQWCIGHL---T------D-------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~---~------~-------~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++||+|++......+ . . .....+++++.++|||||.++++..
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 689999986322111 0 0 2346899999999999999999753
No 223
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.37 E-value=4.1e-13 Score=122.77 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=87.2
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (284)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++ ..+++++++|+.++.. +.++||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHHHHHHHHhhCCCCC
Confidence 6789999999999999998877666899999999999999999876543 2378999999876532 246899
Q ss_pred EEEecchhccCCh-------hhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~-------~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|++.......+. .....++.++.++|+|||.++++.+.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998654322211 35678999999999999999988653
No 224
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.37 E-value=1.4e-12 Score=109.97 Aligned_cols=103 Identities=12% Similarity=-0.060 Sum_probs=86.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||||||+|.++..+. ....|+++|+++.|++.+++++... +.+..+..+|+...+++ ++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-------g~~~~~~v~D~~~~~~~-~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-------DWDFTFALQDVLCAPPA-EAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-------TCEEEEEECCTTTSCCC-CBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-------CCCceEEEeecccCCCC-CCcchHH
Confidence 467899999999999999776 3447999999999999999997553 35678899999877765 5999999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+.-++||+.+++....+ ++...|+++|.++-.+
T Consensus 174 llk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 174 IFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp EESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99999999766655555 8888999999888777
No 225
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.37 E-value=2e-13 Score=124.43 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=85.4
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCc-ceeEEEcCCCCCCC----CCCce
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHK-ATNFFCVPLQDFTP----ETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~----~~~~f 231 (284)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++ .. +++++++|+.++.. ...+|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhCCCc
Confidence 5679999999999999998876766899999999999999999876554 22 68999999876321 23589
Q ss_pred eEEEecchh-----ccCC--hhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 232 DVIWVQWCI-----GHLT--DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 232 D~Iv~~~~l-----~~~~--~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+|++.... .+.. ...+..+++.+.++|+|||.++++.+.
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999986443 1222 123556888899999999999998653
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.37 E-value=6.3e-13 Score=114.87 Aligned_cols=100 Identities=16% Similarity=0.070 Sum_probs=79.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+.+|||||||+|..+..+++.. .+|+++|+++.|++.|++++.... ......+++++.+|..++. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~--~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFH--EVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHH--HHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhc--cccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 55799999999999999888764 789999999999999998764310 0000246889999987765 68999998
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.. +++. .+++++.++|+|||.+++..
T Consensus 146 d~-----~dp~--~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 146 LQ-----EPDI--HRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp SS-----CCCH--HHHHHHHTTEEEEEEEEEEE
T ss_pred CC-----CChH--HHHHHHHHhcCCCcEEEEEc
Confidence 63 2223 59999999999999999863
No 227
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.37 E-value=4.2e-13 Score=116.64 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=87.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..++..+..+|+++|+||.+++.+++++..+++ ..+++++++|..++... +.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~~~~D~~~~~~~-~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPGE-NIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCCC-SCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEeCcHHHhccc-cCCCEEE
Confidence 47889999999999999999888777899999999999999999987765 45689999999887654 6899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
++... .-..++..+.++|||||++.+.+++.
T Consensus 198 ~~~p~------~~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 198 MGYVV------RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCCC------cHHHHHHHHHHHcCCCCEEEEEeeec
Confidence 87542 12257788889999999998876643
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.36 E-value=3.6e-13 Score=118.51 Aligned_cols=108 Identities=18% Similarity=0.163 Sum_probs=78.7
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCC--CCCCCCCCCcceeEEEcCCCCC-CCCCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAP--ENHMAPDMHKATNFFCVPLQDF-TPETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD 232 (284)
.+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|++++.. .++ ...+++++.+|+.++ +..+++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~----~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF----DDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG----GCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc----CCCceEEEECcHHHHHhhCCCCce
Confidence 45799999999999999888653 34899999999999999998742 111 025689999997653 22346899
Q ss_pred EEEecchhccCCh-h--hHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTD-D--DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~-~--~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|++...-+++.. . ....+++++.++|+|||.+++.
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9998543221211 1 1258999999999999999996
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.36 E-value=6.4e-13 Score=113.11 Aligned_cols=121 Identities=11% Similarity=-0.020 Sum_probs=94.8
Q ss_pred ccccHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcc
Q 023288 135 IKGSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKA 213 (284)
Q Consensus 135 ~~~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~ 213 (284)
+.....+....+.. ...+.+|||||||+|.++..++...+. +|+++|+++.|++.+++++...| ..
T Consensus 116 Lp~lD~fY~~i~~~------i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-------~~ 182 (281)
T 3lcv_B 116 LPHLDEFYRELFRH------LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-------VP 182 (281)
T ss_dssp GGGHHHHHHHHGGG------SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-------CC
T ss_pred hHhHHHHHHHHHhc------cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-------CC
Confidence 44444555444432 234779999999999999988755344 89999999999999999987654 34
Q ss_pred eeEEEcCCCCCCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 214 TNFFCVPLQDFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 214 ~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.++...|+..-++ .++||+|++.-+++|+.++.....+ ++...|+|+|.++-.+.
T Consensus 183 ~~~~v~D~~~~~p-~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 183 HRTNVADLLEDRL-DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp EEEEECCTTTSCC-CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred ceEEEeeecccCC-CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 7788888876554 4789999999999999877655666 89999999999888775
No 230
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.35 E-value=4.2e-12 Score=117.96 Aligned_cols=110 Identities=12% Similarity=0.071 Sum_probs=87.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCc
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGR 230 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 230 (284)
..++.+|||+|||+|..+..++.... .+|+++|+|+.+++.+++++...++ .++++.+.|+.+++ +++++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSSSSCSSC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcchhhccCC
Confidence 56778999999999999999987643 3799999999999999999876543 36889999998876 44478
Q ss_pred eeEEEe------cchhccCChh-------hH-------HHHHHHHHhcCCCCcEEEEEec
Q 023288 231 YDVIWV------QWCIGHLTDD-------DF-------VSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 231 fD~Iv~------~~~l~~~~~~-------~~-------~~~l~~~~r~LkpGG~lii~e~ 270 (284)
||+|++ ..++++.++. ++ ..+++++.++|||||.+++++.
T Consensus 331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999996 3344544421 11 5789999999999999998764
No 231
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=1.5e-12 Score=106.75 Aligned_cols=99 Identities=23% Similarity=0.281 Sum_probs=73.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC----------CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEE-EcCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF----------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF-CVPLQD 223 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~----------~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~-~~d~~~ 223 (284)
..++.+|||+|||+|.++..+++... .+|+++|+|+.+ . ..++++. .+|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~--------~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P--------LEGATFLCPADVTD 82 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C--------CTTCEEECSCCTTS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c--------CCCCeEEEeccCCC
Confidence 34678999999999999999988743 579999999831 0 1347788 888766
Q ss_pred CC--------CCCCceeEEEecchhccC----Chhh-----HHHHHHHHHhcCCCCcEEEEEec
Q 023288 224 FT--------PETGRYDVIWVQWCIGHL----TDDD-----FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 224 ~~--------~~~~~fD~Iv~~~~l~~~----~~~~-----~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.. +++++||+|++..+++.. .+.. ...+++++.++|||||.|++...
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 43 234589999987654432 2111 14789999999999999999865
No 232
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.34 E-value=6.9e-13 Score=129.38 Aligned_cols=109 Identities=16% Similarity=0.153 Sum_probs=87.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Iv 235 (284)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++. ..+++++++|+.++ +...++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHHHHHhcCCCccEEE
Confidence 56799999999999999988777768999999999999999998776541 14689999998764 23346899999
Q ss_pred ecchh-----------ccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCI-----------GHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l-----------~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+.... ... .+...++..+.++|+|||.|+++.+.
T Consensus 615 ~DPP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 86532 221 35778999999999999999987654
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.32 E-value=1.3e-12 Score=119.58 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=86.5
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (284)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.|++++...++. ..+++++++|+.++.. ...+||
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~----~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD----LSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHhcCCCCC
Confidence 56799999999999999998776668999999999999999998764420 1268999999876532 135899
Q ss_pred EEEecchhccCC-------hhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLT-------DDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~-------~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|++.......+ ...+..++.++.+.|+|||.++++.+.
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999875321110 035778999999999999999998654
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.32 E-value=9.2e-13 Score=119.92 Aligned_cols=108 Identities=20% Similarity=0.140 Sum_probs=85.6
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC----CCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP----ETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD 232 (284)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...++ .+++++++|+.++.. ...+||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~~~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLRRLEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHHHHHhcCCCee
Confidence 5679999999999999998877 55799999999999999999876553 348899999876532 146899
Q ss_pred EEEecchhccCCh-------hhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 233 VIWVQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~-------~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+|++.......+. .....++.++.++|+|||.++++.+.
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9998643222111 24668999999999999999998764
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=3.3e-12 Score=105.16 Aligned_cols=98 Identities=14% Similarity=-0.019 Sum_probs=72.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC-------
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------- 227 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------- 227 (284)
..++.+|||+|||+|.++..+++. ..+|+|+|+++.. . ..+++++++|+.+....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~---------~--------~~~v~~~~~D~~~~~~~~~~~~~~ 84 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME---------E--------IAGVRFIRCDIFKETIFDDIDRAL 84 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC---------C--------CTTCEEEECCTTSSSHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc---------c--------CCCeEEEEccccCHHHHHHHHHHh
Confidence 356789999999999999988866 4479999999731 1 24688999999885421
Q ss_pred ----CCceeEEEecchhccCC---------hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 228 ----TGRYDVIWVQWCIGHLT---------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 ----~~~fD~Iv~~~~l~~~~---------~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.++||+|++........ .+....+++.+.++|||||.|++...
T Consensus 85 ~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 85 REEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 14899999865322111 01245788999999999999998643
No 236
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.30 E-value=4.1e-12 Score=115.25 Aligned_cols=107 Identities=17% Similarity=0.115 Sum_probs=82.8
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|||+|||+|.++..++..+.. +|+|+|+|+.|++.|++++...++ ..++++.++|+.+++.++++||+|
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEECCGGGGGGTCSCEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCCcccCCcCEE
Confidence 46789999999999999988876652 799999999999999999876554 357899999999988777899999
Q ss_pred EecchhccCC-----hhh-HHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLT-----DDD-FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~-----~~~-~~~~l~~~~r~LkpGG~lii~ 268 (284)
+++..++.-. ..+ ...+++++.++| +|+.++++
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 9986654321 112 367889999988 44444443
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.29 E-value=3e-12 Score=114.54 Aligned_cols=102 Identities=9% Similarity=0.046 Sum_probs=83.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.|++++...++ ..+++++++|+.++. ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~---~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD---VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC---CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc---CCCcEEE
Confidence 3678999999999999998 75 566899999999999999999876554 246899999998876 6899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+..... ...++..+.++|+|||.+++.+....
T Consensus 264 ~dpP~~------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 264 MNLPKF------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ECCTTT------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECCcHh------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 864321 12788999999999999999876443
No 238
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.28 E-value=1.6e-12 Score=114.69 Aligned_cols=104 Identities=10% Similarity=-0.015 Sum_probs=72.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeC----CHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEP----VSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~----S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~ 229 (284)
..++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++..+ ....+ ..++.+.++ |+..++ ..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~------~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG------WNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT------GGGEEEECSCCTTTSC--CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC------CCCeEEEeccccccCC--cC
Confidence 456789999999999999988765 46999999 665542110 11100 246889888 887765 45
Q ss_pred ceeEEEecchhc---cCChhh-HHHHHHHHHhcCCCCcEEEEEec
Q 023288 230 RYDVIWVQWCIG---HLTDDD-FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 230 ~fD~Iv~~~~l~---~~~~~~-~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+||+|+|..+++ +..+.. ...++..+.++|||||.|++...
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 899999977653 212111 12578999999999999988543
No 239
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=3.2e-12 Score=116.54 Aligned_cols=107 Identities=11% Similarity=-0.043 Sum_probs=81.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCceeEEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~Iv 235 (284)
++.+|||+|||+|.++..++..+.. |+++|+|+.+++.|++++...++ ..++.++|+.++. ...+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~-------~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL-------RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC-------CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC-------CCcEEEccHHHHHHHhcCCCCEEE
Confidence 5789999999999999999877666 99999999999999999876543 1346688876642 1124599999
Q ss_pred ecchhccCCh-------hhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 236 VQWCIGHLTD-------DDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 236 ~~~~l~~~~~-------~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
+......-+. .+...++..+.++|+|||.|++..+.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 8754311111 24568899999999999999977653
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.27 E-value=6.4e-12 Score=112.69 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=84.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC------CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF------NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~------~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 229 (284)
.++.+|||+|||+|.++..++.... .+++|+|+++.+++.|+.++...+ .++.+.++|..... ..+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-------~~~~i~~~D~l~~~-~~~ 200 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-------QKMTLLHQDGLANL-LVD 200 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-------CCCEEEESCTTSCC-CCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-------CCceEEECCCCCcc-ccC
Confidence 4568999999999999998876542 469999999999999999865432 24678889876533 346
Q ss_pred ceeEEEecchhccCChhhH----------------HHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCIGHLTDDDF----------------VSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~----------------~~~l~~~~r~LkpGG~lii~e 269 (284)
+||+|+++..+++++.++. ..++.++.+.|+|||++++.-
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999988877653332 258999999999999998875
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.26 E-value=1e-11 Score=114.66 Aligned_cols=109 Identities=17% Similarity=0.045 Sum_probs=86.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~f 231 (284)
..++.+|||+|||+|..+..++..+. .+|+++|+|+.+++.+++++...+. ++.+.+.|+.+++ +++++|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTTCTHHHHTTCCE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchhhchhhcccCCC
Confidence 56778999999999999999998765 3799999999999999999876432 3678899998875 445789
Q ss_pred eEEEec------chhccCChh-------h-------HHHHHHHHHhcCCCCcEEEEEec
Q 023288 232 DVIWVQ------WCIGHLTDD-------D-------FVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~------~~l~~~~~~-------~-------~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+|++. .++++.++. + ...+++++.++|||||.++++..
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999952 344444421 1 14789999999999999999763
No 242
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=1.2e-11 Score=115.43 Aligned_cols=107 Identities=14% Similarity=0.136 Sum_probs=83.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-CCCceeE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-ETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~ 233 (284)
++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...++ .++.+.+.|+.+++. .+++||+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVPEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHSTTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhccccCCE
Confidence 778999999999999999987643 3799999999999999999875443 368899999988653 3468999
Q ss_pred EEec------chhccCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~------~~l~~~~~-------~~-------~~~~l~~~~r~LkpGG~lii~e 269 (284)
|++. .++.+.++ ++ ...+++++.++|||||+|+++.
T Consensus 191 Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 191 ILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp EEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9972 23333221 11 2478999999999999999874
No 243
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.22 E-value=7.2e-12 Score=116.23 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=83.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 231 (284)
..++.+|||+|||+|..+..+++... ..|+++|+|+.+++.+++++...|+ . +.+.++|+.+++ ..+++|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHHHCSCE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhhccccC
Confidence 55788999999999999999987644 3799999999999999999876543 2 778888877654 234789
Q ss_pred eEEEec------chhccCCh-------hh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQ------WCIGHLTD-------DD-------FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~------~~l~~~~~-------~~-------~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|++. .++..-++ ++ ...+++++.++|||||+|+++.
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999952 22332221 11 2679999999999999999864
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.21 E-value=4.3e-11 Score=110.22 Aligned_cols=100 Identities=21% Similarity=0.201 Sum_probs=77.9
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|++++...++ . ++|+++|+.++... +||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~d~~~~~~~--~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNV------D-AEFEVASDREVSVK--GFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC------C-EEEEECCTTTCCCT--TCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECChHHcCcc--CCCEEE
Confidence 35679999999999999988865 45799999999999999998865432 2 88999999887533 899999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+......+. . .+++.+. .|+|||.++++-+
T Consensus 359 ~dPPr~g~~--~--~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 359 VDPPRAGLH--P--RLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ECCCTTCSC--H--HHHHHHH-HHCCSEEEEEESC
T ss_pred EcCCccchH--H--HHHHHHH-hcCCCcEEEEECC
Confidence 976543333 1 3555554 4899999999843
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.20 E-value=3.6e-11 Score=105.84 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=72.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.+++++...+ ..+++++++|+.+++++ +||+|
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~------~~~v~~~~~D~~~~~~~--~~D~V 110 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEG------YNNLEVYEGDAIKTVFP--KFDVC 110 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTT------CCCEEC----CCSSCCC--CCSEE
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcC------CCceEEEECchhhCCcc--cCCEE
Confidence 4567899999999999999888654 479999999999999999875322 14688999999887653 79999
Q ss_pred EecchhccCChhhHHHHH---------------HHHHhcCCCCc
Q 023288 235 WVQWCIGHLTDDDFVSFF---------------KRAKVGLKPGG 263 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l---------------~~~~r~LkpGG 263 (284)
+++...+. ..+.+..++ ..+.|+++|+|
T Consensus 111 v~n~py~~-~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 111 TANIPYKI-SSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp EEECCGGG-HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred EEcCCccc-ccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 99766553 333344444 34678888877
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.18 E-value=7.2e-11 Score=109.12 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=79.1
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC----CCCCCc
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETGR 230 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~ 230 (284)
..++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...++ .+++|+++|+.+. ++.+++
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCTTSCCSSSGGGTTC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEECCHHHHhhhhhhhcCC
Confidence 346679999999999999988865 55799999999999999999865443 3789999999873 234568
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
||+|+++...... ..+++.+.+ ++|++.++++.+
T Consensus 357 fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 357 FDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp CSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEESC
T ss_pred CCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEECC
Confidence 9999987554332 245555543 789999988754
No 247
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.15 E-value=1.9e-12 Score=110.70 Aligned_cols=104 Identities=17% Similarity=0.133 Sum_probs=78.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (284)
..++.+|||+|||+|.++..++..+ .+|+|+|+|+.|++.++++... ..+++++++|+.+++++. ++| .
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL--------NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT--------CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc--------CCceEEEECChhhcCcccCCCc-E
Confidence 4567899999999999999998776 5799999999999999887652 357899999999987663 689 6
Q ss_pred EEecchhccCChhhHH----------HHH----HHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGHLTDDDFV----------SFF----KRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~----------~~l----~~~~r~LkpGG~lii~e 269 (284)
|+++...+. +.+.+. .++ +.+.++|+|||.+++..
T Consensus 97 vv~n~Py~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 97 IVGNIPYHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EEEECCSSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EEEeCCccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 666533221 111111 334 66999999999887754
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.15 E-value=1.2e-10 Score=102.06 Aligned_cols=79 Identities=13% Similarity=0.042 Sum_probs=67.3
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||||||+|.++..++... .+|+++|+++.|++.+++++.. ..+++++++|+.++++++.+||+|
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~--------~~~v~vi~gD~l~~~~~~~~fD~I 118 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKEL--------YNNIEIIWGDALKVDLNKLDFNKV 118 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHH--------CSSEEEEESCTTTSCGGGSCCSEE
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhcc--------CCCeEEEECchhhCCcccCCccEE
Confidence 4577899999999999999998774 4699999999999999998753 356899999999988777789999
Q ss_pred Eecchhcc
Q 023288 235 WVQWCIGH 242 (284)
Q Consensus 235 v~~~~l~~ 242 (284)
+++..++.
T Consensus 119 v~NlPy~i 126 (295)
T 3gru_A 119 VANLPYQI 126 (295)
T ss_dssp EEECCGGG
T ss_pred EEeCcccc
Confidence 98866543
No 249
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.15 E-value=2.1e-11 Score=112.98 Aligned_cols=109 Identities=13% Similarity=0.021 Sum_probs=82.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 231 (284)
..++.+|||+|||+|..+..++.... ..|+++|+|+.+++.+++++...++ .++.+.+.|..++. ..+++|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~------~nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV------SNAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC------SSEEEECCCHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEeCCHHHhhhhccccC
Confidence 56788999999999999999887633 3799999999999999999876553 35788888887654 224689
Q ss_pred eEEEecc------hhccCCh-------h-------hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQW------CIGHLTD-------D-------DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~------~l~~~~~-------~-------~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|++.. ++..-++ + ....++.++.++|||||.|+++.
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999742 2222111 0 12378999999999999999864
No 250
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.12 E-value=7.9e-11 Score=105.28 Aligned_cols=114 Identities=13% Similarity=0.058 Sum_probs=80.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCC--CCCCCcceeEEEcCCCCCCC----CCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--APDMHKATNFFCVPLQDFTP----ETG 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~----~~~ 229 (284)
..+.+||+||||+|..+..+++....+|++||+++.+++.|++++...+.. ......+++++.+|..++.. +.+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 367899999999999999998776668999999999999999998643210 00011368999999877542 246
Q ss_pred ceeEEEecchh-cc--CCh-hhHHHHHHHH----HhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCI-GH--LTD-DDFVSFFKRA----KVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l-~~--~~~-~~~~~~l~~~----~r~LkpGG~lii~e 269 (284)
+||+|++...- .. .+. -.-..+++.+ .++|+|||.+++.-
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 89999986532 11 110 0113566665 99999999998853
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.12 E-value=6.2e-10 Score=94.99 Aligned_cols=74 Identities=23% Similarity=0.281 Sum_probs=60.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (284)
..++.+|||||||+|.++..++..+ .+|+|+|+|+.|++.+++++.. ..+++++++|+.++++++ ..| .
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--------~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--------HDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--------CCSEEEECCCGGGCCCCSSCCC-E
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--------CCCeEEEEChHHhCCcccCCCe-E
Confidence 4567899999999999999999876 5699999999999999999864 246899999999887663 456 4
Q ss_pred EEecc
Q 023288 234 IWVQW 238 (284)
Q Consensus 234 Iv~~~ 238 (284)
|+++.
T Consensus 98 vv~nl 102 (244)
T 1qam_A 98 IFGNI 102 (244)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 55543
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.11 E-value=1.3e-10 Score=107.70 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=83.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC--------------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY--------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--------------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d 220 (284)
+.++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.|+.++...+.. ..++++.++|
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~----~~~~~i~~gD 244 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG----TDRSPIVCED 244 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC----SSCCSEEECC
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC----cCCCCEeeCC
Confidence 4567799999999999998777542 236999999999999999886543321 0146788898
Q ss_pred CCCCCCCCCceeEEEecchhccCChhh---------------HHHHHHHHHhcCCCCcEEEEEe
Q 023288 221 LQDFTPETGRYDVIWVQWCIGHLTDDD---------------FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 221 ~~~~~~~~~~fD~Iv~~~~l~~~~~~~---------------~~~~l~~~~r~LkpGG~lii~e 269 (284)
....+.. .+||+|+++..+.+....+ ...+++.+.+.|||||+++++-
T Consensus 245 ~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 245 SLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp TTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 8776544 4899999998777643211 1378999999999999998874
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.09 E-value=6.6e-10 Score=100.95 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=85.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (284)
..++..|||.+||+|.++...+.... .+++|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 45678999999999999988775432 249999999999999
Q ss_pred HHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEecchhcc-C-ChhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023288 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-L-TDDDFVSFFKRAKVGLKP--GGFFVLKE 269 (284)
Q Consensus 196 ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~-~-~~~~~~~~l~~~~r~Lkp--GG~lii~e 269 (284)
|++++...++ ...+++.+.|+.+++.+ .+||+|+++..+.. + ..+++..+++.+.+.||+ ||.+++.-
T Consensus 272 Ar~Na~~~gl-----~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 272 ARKNAREVGL-----EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHHTTC-----TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9999877655 34589999999988765 48999999966432 2 335677888888888877 88877763
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.09 E-value=2.7e-10 Score=103.90 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=83.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (284)
..++..|||.+||+|.++...+.... .+|+|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 45678999999999999988775432 249999999999999
Q ss_pred HHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEecchhcc-CC-hhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023288 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKE 269 (284)
Q Consensus 196 ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~-~~-~~~~~~~l~~~~r~Lkp--GG~lii~e 269 (284)
|++++...++ ..++++.++|+.+++.+ .+||+|+++..+.. +. .+++..+.+.+.+.||+ ||.+++.-
T Consensus 279 Ar~Na~~~gl-----~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 279 AKQNAVEAGL-----GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHHTTC-----TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9999877654 34589999999988765 48999999965432 21 23566677777777665 88777753
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.09 E-value=1.4e-10 Score=106.35 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=74.8
Q ss_pred CCCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
.++.+|||+|||+|.++..++++. ..+++|+|+++.+++.| .+++++++|+.++.. .++||+
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------~~~~~~~~D~~~~~~-~~~fD~ 101 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------PWAEGILADFLLWEP-GEAFDL 101 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------TTEEEEESCGGGCCC-SSCEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------CCCcEEeCChhhcCc-cCCCCE
Confidence 345699999999999999888753 34799999999998765 237889999887654 368999
Q ss_pred EEecchhcc----------CChhh-----------------HHHHHHHHHhcCCCCcEEEEEe
Q 023288 234 IWVQWCIGH----------LTDDD-----------------FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~----------~~~~~-----------------~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+++..+.. +..+. ...+++.+.++|+|||.+++.-
T Consensus 102 Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 102 ILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999744322 22221 1267999999999999998874
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=3.9e-10 Score=102.60 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=85.0
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC---------------------------------------CcEEEEeCCHHHHHH
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF---------------------------------------NEVDLLEPVSHFLDA 195 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~---------------------------------------~~v~gvD~S~~~l~~ 195 (284)
..++.+|||++||+|.++..++.... .+|+|+|+++.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 45678999999999999998876432 259999999999999
Q ss_pred HHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEecchhcc-CC-hhhHHHHHHHHHhcCCC--CcEEEEEe
Q 023288 196 ARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQWCIGH-LT-DDDFVSFFKRAKVGLKP--GGFFVLKE 269 (284)
Q Consensus 196 ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~~~l~~-~~-~~~~~~~l~~~~r~Lkp--GG~lii~e 269 (284)
|++++...++ ..++++.+.|+.+++.+ .+||+|+++..+.. +. .+++..+++++.+.||+ ||.+++..
T Consensus 273 Ar~Na~~~gl-----~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 273 ARENAEIAGV-----DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHTC-----GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHHcCC-----CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 9999876554 34689999999988765 58999999877542 22 24567788888888876 88777753
No 257
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.03 E-value=5.1e-10 Score=97.77 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=68.2
Q ss_pred CCCCceEEEeec------cccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeE-EEcCCCCCC
Q 023288 155 NNQHLVALDCGS------GIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNF-FCVPLQDFT 225 (284)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~-~~~d~~~~~ 225 (284)
..++.+|||+|| |+|. ..+++... .+|+|+|+|+. . .++++ +++|+.+++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-----------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-----------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-----------CSSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-----------CCCEEEEECccccCC
Confidence 567889999999 5576 32444433 37999999987 1 13678 999998876
Q ss_pred CCCCceeEEEecchhcc--------CC-hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 PETGRYDVIWVQWCIGH--------LT-DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~--------~~-~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++ ++||+|+++...+. .. ...+..+++++.++|||||.|++...
T Consensus 120 ~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 120 TA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 55 68999999754221 11 11255899999999999999999654
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=8.1e-10 Score=94.89 Aligned_cols=76 Identities=13% Similarity=0.162 Sum_probs=62.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC----CCc
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----TGR 230 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~ 230 (284)
..++.+|||||||+|.++..++..+ .+|+++|+++.|++.+++++.. ..+++++++|+.+++++ .++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~~~ 97 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ--------QKNITIYQNDALQFDFSSVKTDKP 97 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT--------CTTEEEEESCTTTCCGGGSCCSSC
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh--------CCCcEEEEcchHhCCHHHhccCCC
Confidence 4567899999999999999988765 5799999999999999999865 35689999999998753 246
Q ss_pred eeEEEecchh
Q 023288 231 YDVIWVQWCI 240 (284)
Q Consensus 231 fD~Iv~~~~l 240 (284)
|| |+++...
T Consensus 98 ~~-vv~NlPY 106 (255)
T 3tqs_A 98 LR-VVGNLPY 106 (255)
T ss_dssp EE-EEEECCH
T ss_pred eE-EEecCCc
Confidence 88 6666544
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.98 E-value=1.1e-09 Score=94.83 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=68.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (284)
..++ +|||||||+|.++..++..+ .+|+++|+++.|++.+++++.. .+++++++|+.++++++ ..+|.
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~---------~~v~vi~~D~l~~~~~~~~~~~~ 113 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG---------LPVRLVFQDALLYPWEEVPQGSL 113 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT---------SSEEEEESCGGGSCGGGSCTTEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC---------CCEEEEECChhhCChhhccCccE
Confidence 4566 99999999999999999776 4699999999999999999763 46899999999887653 26899
Q ss_pred EEecchhccCChhhHHHHHHH
Q 023288 234 IWVQWCIGHLTDDDFVSFFKR 254 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~ 254 (284)
|+++...+ ++.+-+..++..
T Consensus 114 iv~NlPy~-iss~il~~ll~~ 133 (271)
T 3fut_A 114 LVANLPYH-IATPLVTRLLKT 133 (271)
T ss_dssp EEEEECSS-CCHHHHHHHHHH
T ss_pred EEecCccc-ccHHHHHHHhcC
Confidence 98887654 343334444443
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.95 E-value=3e-09 Score=93.85 Aligned_cols=107 Identities=10% Similarity=-0.039 Sum_probs=77.7
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC---C
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---G 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~ 229 (284)
+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++...++ .++++++.|+.++.... .
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTTCGGGT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCccccccC
Confidence 5678899999999999999988753 23799999999999999999876553 46889999988765332 4
Q ss_pred ceeEEEec------chhccCCh---------hh-------HHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQ------WCIGHLTD---------DD-------FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~------~~l~~~~~---------~~-------~~~~l~~~~r~LkpGG~lii~ 268 (284)
+||.|++. .++..-++ ++ ...++..+.++|+ ||.|+.+
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYs 233 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYS 233 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 79999963 22222111 11 1346788888887 9988875
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.93 E-value=1.8e-09 Score=97.74 Aligned_cols=97 Identities=14% Similarity=0.076 Sum_probs=72.2
Q ss_pred CceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--CCC-------
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--PET------- 228 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~------- 228 (284)
+.+|||+|||+|.++..++. ...+|+|+|+|+.+++.|++++...++ .+++|+++|+.++. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCC------CceEEEECCHHHHHHHHhhccccccc
Confidence 56899999999999997774 556799999999999999999876543 46899999987642 111
Q ss_pred -------CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 229 -------GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 229 -------~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+||+|++...-.. +..++.+.|+|+|.+++..
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEE
T ss_pred cccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEE
Confidence 37999997644221 2344555667888777764
No 262
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.92 E-value=3.8e-10 Score=97.18 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=75.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCH-------HHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C-C
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T-P 226 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~-------~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~ 226 (284)
.++.+|||+|||+|..+..++..+. +|+++|+|+ .+++.|+++....++ ..+++++++|+.++ + +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AARINLHFGNAAEQMPAL 155 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HTTEEEEESCHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----ccCeEEEECCHHHHHHhh
Confidence 4567999999999999998887654 699999999 999999887643221 12489999998774 2 2
Q ss_pred CC--CceeEEEecchhccCCh------------------hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ET--GRYDVIWVQWCIGHLTD------------------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~--~~fD~Iv~~~~l~~~~~------------------~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++ ++||+|++...+.+... .+...++..+.++.+. .+++...
T Consensus 156 ~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p 217 (258)
T 2r6z_A 156 VKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRP 217 (258)
T ss_dssp HHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEE
T ss_pred hccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcC
Confidence 33 58999999776655321 1345666777777643 5666554
No 263
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.91 E-value=6.6e-10 Score=100.97 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=80.3
Q ss_pred CCceEEEeeccccHHHHHHHHh--CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcc-eeEEEcCCCCCCC--CCCce
Q 023288 157 QHLVALDCGSGIGRITKNLLIR--YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCVPLQDFTP--ETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~--~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~--~~~~f 231 (284)
++.+|||++||+|.++..++.+ +..+|+++|+++.+++.++++++..++ ..+ ++++++|+.++.. ..++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHHHHHHhhCCCC
Confidence 5689999999999999998875 335799999999999999999987664 233 8899998755321 13579
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|++.. . . ....++..+.+.|+|||.++++-
T Consensus 127 D~V~lDP-~---g--~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-F---G--TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-S---S--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-C---c--CHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999876 1 1 12368889999999999888864
No 264
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.90 E-value=5.4e-10 Score=101.34 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=78.1
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCC---------------CCCCCCCCcceeEEEcC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPE---------------NHMAPDMHKATNFFCVP 220 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~---------------~~~~~~~~~~~~~~~~d 220 (284)
++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... ++ .+++++++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcCc
Confidence 46799999999999999998873 347999999999999999998654 32 238889999
Q ss_pred CCCCCC-CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 221 LQDFTP-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 221 ~~~~~~-~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+.++.. ..++||+|++.- .. ....++..+.+.|||||.++++
T Consensus 121 a~~~~~~~~~~fD~I~lDP-~~-----~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDP-FG-----SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHHHHHSTTCEEEEEECC-SS-----CCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCC-CC-----CHHHHHHHHHHhcCCCCEEEEE
Confidence 866431 135799999653 21 1237889999999999988886
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.88 E-value=4.2e-09 Score=90.14 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=58.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCC--cee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG--RYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~fD 232 (284)
..++.+|||||||+|.++..++..+..+|+++|+++.|++.++++ . ..+++++++|+.++++++. .|
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---------~~~v~~i~~D~~~~~~~~~~~~~- 97 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---------DERLEVINEDASKFPFCSLGKEL- 97 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---------CTTEEEECSCTTTCCGGGSCSSE-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---------CCCeEEEEcchhhCChhHccCCc-
Confidence 456789999999999999998866446899999999999999887 2 2468999999999876531 23
Q ss_pred EEEecchh
Q 023288 233 VIWVQWCI 240 (284)
Q Consensus 233 ~Iv~~~~l 240 (284)
.|+++...
T Consensus 98 ~vv~NlPy 105 (249)
T 3ftd_A 98 KVVGNLPY 105 (249)
T ss_dssp EEEEECCT
T ss_pred EEEEECch
Confidence 55554443
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.88 E-value=6.6e-09 Score=99.37 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=77.7
Q ss_pred CCceEEEeeccccHHHHHH---HHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCce
Q 023288 157 QHLVALDCGSGIGRITKNL---LIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l---~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 231 (284)
+...|||+|||+|.+.... +++... +|++||-|+ |...+++....+++ ..+|+++.+|++++..+ .++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~-----~dkVtVI~gd~eev~LP-EKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW-----GSQVTVVSSDMREWVAP-EKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT-----GGGEEEEESCTTTCCCS-SCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC-----CCeEEEEeCcceeccCC-ccc
Confidence 4467999999999984433 334433 689999997 66677777766555 56799999999998876 589
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
|+||+-+.=..+-.+-....+....|.|||||.++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998765433333445578888899999999764
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.84 E-value=1.2e-08 Score=84.12 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=74.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC------------
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF------------ 224 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~------------ 224 (284)
+..+|||+||| ..+..+++....+|+.+|.+++..+.|+++++..++. ...+++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~---~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA---EGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC---TTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CCCceEEEEeCchhhhcccccccchhh
Confidence 45799999985 6777666421358999999999999999998765430 024688999986542
Q ss_pred ---C--------C-CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 225 ---T--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 225 ---~--------~-~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
+ . ..++||+|+.-.-. ....+..+.+.|+|||++ +.||+...
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~GG~I-v~DNv~~r 158 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITRPVTL-LFDDYSQR 158 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSSCEEE-EETTGGGC
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCCCeEE-EEeCCcCC
Confidence 1 1 23689999987642 125666677999999988 55775433
No 268
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.83 E-value=4.2e-09 Score=90.12 Aligned_cols=105 Identities=12% Similarity=0.000 Sum_probs=68.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+|||+|.++..++.. ....+.++|++..+.... . .......++.....++....++.++||+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~p-----i---~~~~~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKP-----M---NVQSLGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCC-----C---CCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccc-----c---ccCcCCCCeEEEeccceehhcCCCCccE
Confidence 457789999999999999976654 333788999874331000 0 0000122455566665555566678999
Q ss_pred EEecchhccCChh--h---HHHHHHHHHhcCCCC-cEEEEE
Q 023288 234 IWVQWCIGHLTDD--D---FVSFFKRAKVGLKPG-GFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~~~~~~--~---~~~~l~~~~r~LkpG-G~lii~ 268 (284)
|+|..+.+ .... | ...+++.+.++|+|| |.|++.
T Consensus 144 VlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 144 LLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 99987665 2211 1 123578889999999 999994
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.83 E-value=4.2e-09 Score=90.28 Aligned_cols=75 Identities=8% Similarity=0.059 Sum_probs=58.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCc--EEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC----
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET---- 228 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~--v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---- 228 (284)
..++.+|||||||+|.++. +. ++ .+ |+++|+++.|++.+++++.. ..+++++++|+.++++++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~--------~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL--------GPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT--------GGGEEEECSCGGGCCHHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc--------CCceEEEECchhhCCHHHhhcc
Confidence 4567899999999999999 64 44 45 99999999999999988754 247899999998876432
Q ss_pred -CceeEEEecchh
Q 023288 229 -GRYDVIWVQWCI 240 (284)
Q Consensus 229 -~~fD~Iv~~~~l 240 (284)
+..|.|+++...
T Consensus 88 ~~~~~~vvsNlPY 100 (252)
T 1qyr_A 88 MGQPLRVFGNLPY 100 (252)
T ss_dssp HTSCEEEEEECCT
T ss_pred cCCceEEEECCCC
Confidence 234677776553
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.79 E-value=2.1e-08 Score=97.89 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=80.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-------------------------------------------CCcEEEEeCCHH
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------------------------------FNEVDLLEPVSH 191 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-------------------------------------------~~~v~gvD~S~~ 191 (284)
..++..|||.+||+|.++...+... ...++|+|+++.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 4567899999999999998776532 126999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC--CCceeEEEecchhcc-C-ChhhHHHHHHHH---HhcCCCCcE
Q 023288 192 FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--TGRYDVIWVQWCIGH-L-TDDDFVSFFKRA---KVGLKPGGF 264 (284)
Q Consensus 192 ~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~fD~Iv~~~~l~~-~-~~~~~~~~l~~~---~r~LkpGG~ 264 (284)
|++.|++++...|+ ...+++.++|+.++..+ .++||+|+++..+.. + ..+++..+.+.+ .+.+.|||.
T Consensus 268 av~~A~~N~~~agv-----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 268 VIQRARTNARLAGI-----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHHTTC-----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHcCC-----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 99999999887665 34589999999887433 348999999966532 1 223444555544 455568998
Q ss_pred EEEE
Q 023288 265 FVLK 268 (284)
Q Consensus 265 lii~ 268 (284)
+++.
T Consensus 343 ~~il 346 (703)
T 3v97_A 343 LSLF 346 (703)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.79 E-value=1.1e-08 Score=97.01 Aligned_cols=114 Identities=11% Similarity=-0.013 Sum_probs=81.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-------------------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCccee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-------------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATN 215 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-------------------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~ 215 (284)
+.++.+|||.+||+|.++..++... ...++|+|+++.+++.|+.++...+.... ......
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~-~~~~~~ 245 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN-LDHGGA 245 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB-GGGTBS
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc-ccccCC
Confidence 4567899999999999988776531 12699999999999999988755443110 001267
Q ss_pred EEEcCCCCCC-CCCCceeEEEecchhccCChh------------hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 216 FFCVPLQDFT-PETGRYDVIWVQWCIGHLTDD------------DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 216 ~~~~d~~~~~-~~~~~fD~Iv~~~~l~~~~~~------------~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+.++|....+ ...++||+|+++..+...... .-..++..+.+.|||||++.++-
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 7888876543 234689999998776543211 12378999999999999988873
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.76 E-value=6.1e-09 Score=91.47 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=62.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--C---CC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--P---ET 228 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~---~~ 228 (284)
..++.+|||+|||+|..+..+++... .+|+|+|+|+.|++.|++++...+ .+++++++|+.+++ . ..
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-------~~v~~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-------DRVSLFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-------TTEEEEECCGGGHHHHHHHTTC
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCHHHHHHHHHhcCC
Confidence 45678999999999999999998753 479999999999999999986532 46899999988764 1 11
Q ss_pred CceeEEEecc
Q 023288 229 GRYDVIWVQW 238 (284)
Q Consensus 229 ~~fD~Iv~~~ 238 (284)
.+||.|++..
T Consensus 97 ~~~D~Vl~D~ 106 (301)
T 1m6y_A 97 EKVDGILMDL 106 (301)
T ss_dssp SCEEEEEEEC
T ss_pred CCCCEEEEcC
Confidence 5799999754
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.76 E-value=1.3e-08 Score=88.47 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=58.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCc---EEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCC--
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNE---VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-- 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~---v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 229 (284)
..++.+|||||||+|.++..++..+..+ |+++|+++.|++.++++. . .+++++++|+.++++++-
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~---------~~v~~i~~D~~~~~~~~~~~ 109 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G---------ELLELHAGDALTFDFGSIAR 109 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G---------GGEEEEESCGGGCCGGGGSC
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C---------CCcEEEECChhcCChhHhcc
Confidence 4567899999999999999998765432 999999999999999984 1 468999999998875421
Q ss_pred ----ceeEEEecch
Q 023288 230 ----RYDVIWVQWC 239 (284)
Q Consensus 230 ----~fD~Iv~~~~ 239 (284)
..+.|+++..
T Consensus 110 ~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 110 PGDEPSLRIIGNLP 123 (279)
T ss_dssp SSSSCCEEEEEECC
T ss_pred cccCCceEEEEccC
Confidence 2345666544
No 274
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.76 E-value=4.9e-08 Score=88.16 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=76.6
Q ss_pred CceEEEeeccccHHHHHHHHh-------------C---CC--cEEEEeCC-----------HHHHHHHHHHcCCCCCCCC
Q 023288 158 HLVALDCGSGIGRITKNLLIR-------------Y---FN--EVDLLEPV-----------SHFLDAARESLAPENHMAP 208 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~-------------~---~~--~v~gvD~S-----------~~~l~~ar~~~~~~~~~~~ 208 (284)
..+|+|+||++|..|..++.. . .+ +|...|+. +.+.+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 689999999999999877764 1 12 68888988 6666665554321
Q ss_pred CCCcceeEEEcCCCCC---CCCCCceeEEEecchhccCChh-------------------------------------hH
Q 023288 209 DMHKATNFFCVPLQDF---TPETGRYDVIWVQWCIGHLTDD-------------------------------------DF 248 (284)
Q Consensus 209 ~~~~~~~~~~~d~~~~---~~~~~~fD~Iv~~~~l~~~~~~-------------------------------------~~ 248 (284)
..+.-|..+....+ .+++++||+|+++.+|||+++. |+
T Consensus 127 --~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 127 --KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp --CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 01234555544443 4778999999999999998632 12
Q ss_pred HHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 249 VSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 249 ~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
..+|+..++.|+|||.+++.-....+
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHhccCCeEEEEEecCCC
Confidence 33477779999999999998554433
No 275
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.74 E-value=4.7e-08 Score=85.07 Aligned_cols=113 Identities=18% Similarity=0.235 Sum_probs=81.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 232 (284)
.+.+.+||-||.|.|..++.+++.. ..+|+.||+++.+++.+++.+..... ...-.++++++.+|...+- -..++||
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~-~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA-GSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-TGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-cccCCCcEEEEechHHHHHhhccccCC
Confidence 3467899999999999999988542 34899999999999999998642100 0011367899999988864 3456899
Q ss_pred EEEecchhccCChhh--HHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDD--FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~--~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|+.-..=..-+... -..+++.+.++|+|||+++..
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 999643211111000 137999999999999999985
No 276
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.72 E-value=6.2e-08 Score=87.37 Aligned_cols=118 Identities=18% Similarity=0.200 Sum_probs=76.6
Q ss_pred CCCceEEEeeccccHHHHHHHH--------hC-------CC-cEEEEeCCHHHHHHHHHHcCCCCC-------CCCCCCc
Q 023288 156 NQHLVALDCGSGIGRITKNLLI--------RY-------FN-EVDLLEPVSHFLDAARESLAPENH-------MAPDMHK 212 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~--------~~-------~~-~v~gvD~S~~~l~~ar~~~~~~~~-------~~~~~~~ 212 (284)
..+.+|+|+|||+|..+..++. .. +. +|..-|+....-...=+.+..... .... ..
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~-~~ 129 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAAD-GN 129 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---C-CC
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhcccc-CC
Confidence 3468999999999999987633 11 22 688888777665444444332100 0000 00
Q ss_pred ceeEEEc---CCCCCCCCCCceeEEEecchhccCCh------------------------------------hhHHHHHH
Q 023288 213 ATNFFCV---PLQDFTPETGRYDVIWVQWCIGHLTD------------------------------------DDFVSFFK 253 (284)
Q Consensus 213 ~~~~~~~---d~~~~~~~~~~fD~Iv~~~~l~~~~~------------------------------------~~~~~~l~ 253 (284)
+.-|..+ .+-.-.+++++||+|+++.+||++++ .|+..+|+
T Consensus 130 ~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 130 RSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp BCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1123333 33333477899999999999999971 25677899
Q ss_pred HHHhcCCCCcEEEEEeccCCC
Q 023288 254 RAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 254 ~~~r~LkpGG~lii~e~~~~~ 274 (284)
..++.|+|||.++++=....+
T Consensus 210 ~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 210 ARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHhCCCCEEEEEEecCCC
Confidence 999999999999997544433
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.68 E-value=1e-08 Score=98.12 Aligned_cols=104 Identities=13% Similarity=0.078 Sum_probs=74.2
Q ss_pred CCceEEEeeccccHHHHHHHH--h--C----------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCC
Q 023288 157 QHLVALDCGSGIGRITKNLLI--R--Y----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~--~--~----------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~ 222 (284)
+...|||+|||+|.++...+. . + ..+|++||.|+..+...+.+.. .++ ...++++.+|++
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~-----~d~VtVI~gd~e 482 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW-----KRRVTIIESDMR 482 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT-----TTCSEEEESCGG
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC-----CCeEEEEeCchh
Confidence 356899999999999743222 1 1 1279999999977765555443 233 356999999999
Q ss_pred CCCCC-----CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 223 DFTPE-----TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 223 ~~~~~-----~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
++..+ .+++|+||+-+.=.....+-....+..+.+.|||||.++
T Consensus 483 ev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 483 SLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp GHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred hcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 98652 468999998776433333335568888889999999764
No 278
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.64 E-value=1e-08 Score=93.40 Aligned_cols=74 Identities=19% Similarity=0.183 Sum_probs=59.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCC--CCCCCCCCcceeEEEcCCCCC-CC-CCCcee
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE--NHMAPDMHKATNFFCVPLQDF-TP-ETGRYD 232 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~--~~~~~~~~~~~~~~~~d~~~~-~~-~~~~fD 232 (284)
++.+|||+|||+|..+..++.. ..+|+++|+|+.|++.|++++... ++ .+++++++|+.++ +. ++++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhhccCCCce
Confidence 4689999999999999977755 457999999999999999998643 22 4689999999875 21 235899
Q ss_pred EEEec
Q 023288 233 VIWVQ 237 (284)
Q Consensus 233 ~Iv~~ 237 (284)
+|++.
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 279
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.61 E-value=1.5e-08 Score=86.91 Aligned_cols=106 Identities=14% Similarity=-0.008 Sum_probs=67.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||||||+|.++..++.. ....|+|+|++..+...+... .....++.....++....++..++|+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~--------~~~g~~ii~~~~~~dv~~l~~~~~Dv 159 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR--------TTLGWNLIRFKDKTDVFNMEVIPGDT 159 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC--------CBTTGGGEEEECSCCGGGSCCCCCSE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc--------ccCCCceEEeeCCcchhhcCCCCcCE
Confidence 457789999999999999976643 333799999986542222110 00122333444333323345578999
Q ss_pred EEecchhccCChh-----hHHHHHHHHHhcCCCC--cEEEEEe
Q 023288 234 IWVQWCIGHLTDD-----DFVSFFKRAKVGLKPG--GFFVLKE 269 (284)
Q Consensus 234 Iv~~~~l~~~~~~-----~~~~~l~~~~r~LkpG--G~lii~e 269 (284)
|+|..+.. .... ....++.-+.++|+|| |.|++.=
T Consensus 160 VLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 160 LLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 99987765 3211 1223577778999999 9999863
No 280
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.57 E-value=1.1e-07 Score=85.28 Aligned_cols=111 Identities=18% Similarity=0.132 Sum_probs=79.6
Q ss_pred CCCceEEEeeccccHHHHHHHHh------------C---CC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE
Q 023288 156 NQHLVALDCGSGIGRITKNLLIR------------Y---FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC 218 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~------------~---~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~ 218 (284)
....+|+|+||++|..+..+... + .+ +|+..|+........-+.+.... . ..+.-|..
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~----~~~~~f~~ 124 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-D----VDGVCFIN 124 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-S----CTTCEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-c----cCCCEEEE
Confidence 35678999999999877654432 1 22 78999999988888877765321 0 01223444
Q ss_pred c---CCCCCCCCCCceeEEEecchhccCCh-------------------------------hhHHHHHHHHHhcCCCCcE
Q 023288 219 V---PLQDFTPETGRYDVIWVQWCIGHLTD-------------------------------DDFVSFFKRAKVGLKPGGF 264 (284)
Q Consensus 219 ~---d~~~~~~~~~~fD~Iv~~~~l~~~~~-------------------------------~~~~~~l~~~~r~LkpGG~ 264 (284)
+ .+-.-.++++++|+|+++.++|++++ .|+..+|+..++.|+|||.
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 4 33334577899999999999999863 2456779999999999999
Q ss_pred EEEEecc
Q 023288 265 FVLKENI 271 (284)
Q Consensus 265 lii~e~~ 271 (284)
+++.=..
T Consensus 205 mvl~~~g 211 (359)
T 1m6e_X 205 MVLTILG 211 (359)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9997443
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.56 E-value=2e-08 Score=86.15 Aligned_cols=84 Identities=18% Similarity=0.113 Sum_probs=59.0
Q ss_pred ceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCC--CCCCC-CCcceeEEEcCCCCC-CCCCCceeEE
Q 023288 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPEN--HMAPD-MHKATNFFCVPLQDF-TPETGRYDVI 234 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~--~~~~~-~~~~~~~~~~d~~~~-~~~~~~fD~I 234 (284)
.+|||+|||+|..+..++..+. +|+++|+++.+.+.+++.+.... ..... ...+++++++|..++ +....+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7999999999999999998876 59999999987666555432110 00000 124689999998764 2112479999
Q ss_pred EecchhccC
Q 023288 235 WVQWCIGHL 243 (284)
Q Consensus 235 v~~~~l~~~ 243 (284)
++...+.+-
T Consensus 169 ~lDP~y~~~ 177 (258)
T 2oyr_A 169 YLDPMFPHK 177 (258)
T ss_dssp EECCCCCCC
T ss_pred EEcCCCCCc
Confidence 998777653
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.54 E-value=1.1e-07 Score=90.17 Aligned_cols=105 Identities=11% Similarity=-0.128 Sum_probs=74.1
Q ss_pred ceEEEeeccccHHHHHHHHhC----------------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCC
Q 023288 159 LVALDCGSGIGRITKNLLIRY----------------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ 222 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~----------------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~ 222 (284)
.+|||.+||+|.+...++... ...++|+|+++.++..|+.++...+. ..++.+.++|..
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi-----~~~i~i~~gDtL 320 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI-----DFNFGKKNADSF 320 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC-----CCBCCSSSCCTT
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC-----Ccccceeccchh
Confidence 499999999999987764321 22699999999999999988754443 122333566654
Q ss_pred CCC-CCCCceeEEEecchhcc-------------------------CChh--hHHHHHHHHHhcCCCCcEEEEE
Q 023288 223 DFT-PETGRYDVIWVQWCIGH-------------------------LTDD--DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 223 ~~~-~~~~~fD~Iv~~~~l~~-------------------------~~~~--~~~~~l~~~~r~LkpGG~lii~ 268 (284)
..+ ....+||+|+++..+.. ++.. .--.++..+.+.|+|||++.++
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEE
Confidence 433 34578999999866543 1100 0126899999999999998776
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.52 E-value=7.1e-07 Score=84.38 Aligned_cols=109 Identities=16% Similarity=0.062 Sum_probs=80.1
Q ss_pred CCCceEEEeeccccHHHHHHHHhC----CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC--C-CCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY----FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF--T-PET 228 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~----~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~ 228 (284)
.++.+|+|.+||+|.+...++... ...++|+|+++.++..|+.++...+.. ..++.+.++|.... + ...
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----IENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCTTTSCSCCSSC
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----cCccceEecceeccccccccc
Confidence 467799999999999988777653 237999999999999999886544331 13567888887655 3 345
Q ss_pred CceeEEEecchhcc-------------------CC---hhhHHHHHHHHHhcCC-CCcEEEEEe
Q 023288 229 GRYDVIWVQWCIGH-------------------LT---DDDFVSFFKRAKVGLK-PGGFFVLKE 269 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~-------------------~~---~~~~~~~l~~~~r~Lk-pGG~lii~e 269 (284)
.+||+|+++..+.. ++ ..+ -.++..+.+.|+ |||++.++-
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEEE
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEEe
Confidence 78999998854421 10 001 248999999999 999987763
No 284
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.47 E-value=3.7e-07 Score=78.77 Aligned_cols=105 Identities=12% Similarity=-0.059 Sum_probs=65.6
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+|||+||++|.++..+++. +...|+|+|++..+...... ......++.....++.-..+..+.+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--------~~~~~~~iv~~~~~~di~~l~~~~~Dl 150 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--------MQTLGWNIVKFKDKSNVFTMPTEPSDT 150 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--------CCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--------ccccCCceEEeecCceeeecCCCCcCE
Confidence 457889999999999999987754 34478999997543110000 000012233333333323344578999
Q ss_pred EEecchhccCChhh-----HHHHHHHHHhcCCCC-cEEEEE
Q 023288 234 IWVQWCIGHLTDDD-----FVSFFKRAKVGLKPG-GFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~~~~~~~-----~~~~l~~~~r~LkpG-G~lii~ 268 (284)
|+|..... ....+ ...++.-+.++|+|| |.|++.
T Consensus 151 VlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 151 LLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp EEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred EeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 99976655 32211 134577778999999 999996
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.44 E-value=2.6e-07 Score=82.96 Aligned_cols=113 Identities=12% Similarity=0.030 Sum_probs=79.0
Q ss_pred CCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCC--CCCCCcceeEEEcCCCCCC----CCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHM--APDMHKATNFFCVPLQDFT----PETG 229 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~--~~~~~~~~~~~~~d~~~~~----~~~~ 229 (284)
.++.+||-||.|.|..++.+++....+|+.||+++.+++.+++.+....-. ......+++++..|...+- -..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 346799999999999999998655558999999999999999987642111 1111245788888875442 1235
Q ss_pred ceeEEEecchh-------ccCCh-hhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCI-------GHLTD-DDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l-------~~~~~-~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+||+|+.-..- ..... .-...+++.+.++|+|||+++..
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 89999965321 11110 11357899999999999999875
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.42 E-value=8.3e-07 Score=86.38 Aligned_cols=112 Identities=12% Similarity=0.059 Sum_probs=75.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC----CcEEEEeCCHHHHHHH--HHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF----NEVDLLEPVSHFLDAA--RESLAPENHMAPDMHKATNFFCVPLQDFT-PET 228 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~----~~v~gvD~S~~~l~~a--r~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 228 (284)
.++.+|||.|||+|.+...++.... .+++|+|+++.+++.| +.+....++... .....+...|+.... ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG--i~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS--NNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT--TBCCEEECCCGGGCCGGGG
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC--CCcceEEecchhccccccc
Confidence 3577999999999999998886543 2799999999999999 555443221100 112244455554432 234
Q ss_pred CceeEEEecchhcc-CC-hh-------------------------hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 229 GRYDVIWVQWCIGH-LT-DD-------------------------DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~-~~-~~-------------------------~~~~~l~~~~r~LkpGG~lii~e 269 (284)
++||+|+++..+.. .. +. -...++..+.+.|+|||++.+.-
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 68999999876622 11 00 13357889999999999988863
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.38 E-value=2.4e-07 Score=79.48 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=70.9
Q ss_pred CCCceEEEeeccccHHHHHHHHh-------CC------CcEEEEeCCH---HHHH-----------HHHHHcCCCCCC--
Q 023288 156 NQHLVALDCGSGIGRITKNLLIR-------YF------NEVDLLEPVS---HFLD-----------AARESLAPENHM-- 206 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~-------~~------~~v~gvD~S~---~~l~-----------~ar~~~~~~~~~-- 206 (284)
.++.+|||+|||+|..+..+++. .+ .+++++|..| +++. .+++.+......
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999998876543 33 2699999776 5555 445543321000
Q ss_pred ------CCCCCcceeEEEcCCCCC-C-CCC---CceeEEEecc-hhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 207 ------APDMHKATNFFCVPLQDF-T-PET---GRYDVIWVQW-CIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 207 ------~~~~~~~~~~~~~d~~~~-~-~~~---~~fD~Iv~~~-~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
......+++++.+|+.+. + .+. +.||+|+.-. .-...++---..+++.++++|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 000124678889997663 3 221 2799999853 22222210124799999999999999885
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.37 E-value=3.6e-07 Score=70.70 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=59.7
Q ss_pred CCceEEEeecccc-HHHHHHHH-hCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCC-CceeE
Q 023288 157 QHLVALDCGSGIG-RITKNLLI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPET-GRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGtG-~~s~~l~~-~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~fD~ 233 (284)
++.+|||||||.| ..+..|++ .++ .|+++|+++..++ +++.|+.+...+. ..||+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------------~v~dDiF~P~~~~Y~~~DL 92 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------------IVRDDITSPRMEIYRGAAL 92 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------------EECCCSSSCCHHHHTTEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------------eEEccCCCCcccccCCcCE
Confidence 4679999999999 69998886 555 4999999874433 6778887633221 37999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|++... +.++...+.++++.. |.-++|.
T Consensus 93 IYsirP-----P~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 93 IYSIRP-----PAEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp EEEESC-----CTTTHHHHHHHHHHH--TCEEEEE
T ss_pred EEEcCC-----CHHHHHHHHHHHHHc--CCCEEEE
Confidence 988765 446667777777643 4566665
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.31 E-value=1.4e-06 Score=78.05 Aligned_cols=115 Identities=15% Similarity=0.066 Sum_probs=82.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 232 (284)
+.++.+|||+.||.|.-+..++..+.. .|+++|+|+.-++..++++...+........++.+...|...++ ...+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 678899999999999999988876544 79999999999998888776544322222356778888877654 2346899
Q ss_pred EEEe----cch----hcc-------CChhh-------HHHHHHHHHhcCCCCcEEEEEe
Q 023288 233 VIWV----QWC----IGH-------LTDDD-------FVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 233 ~Iv~----~~~----l~~-------~~~~~-------~~~~l~~~~r~LkpGG~lii~e 269 (284)
.|++ +.. +.. ....+ ...+|.++.+.|||||+|+.+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 9993 331 111 11111 2468889999999999998863
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.23 E-value=1.4e-06 Score=75.58 Aligned_cols=107 Identities=9% Similarity=0.042 Sum_probs=76.5
Q ss_pred CCCceEEEeeccccHHHHHHHHhC------CCcEEEEeCCHH--------------------------HHHHHHHHcCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSH--------------------------FLDAARESLAPE 203 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~--------------------------~l~~ar~~~~~~ 203 (284)
..+.+|||+|+..|..+..++... ..+|+++|.... .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 456799999999999988775421 237999996421 467788888765
Q ss_pred CCCCCCCCcceeEEEcCCCCC-C-CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 204 NHMAPDMHKATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 204 ~~~~~~~~~~~~~~~~d~~~~-~-~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+. ..+++++.+++.+. + .+.++||+|+.-.-.. +.....+..+...|+|||++++ |++
T Consensus 185 gl~----~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~-DD~ 245 (282)
T 2wk1_A 185 DLL----DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIV-DDY 245 (282)
T ss_dssp TCC----STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEE-SSC
T ss_pred CCC----cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEE-cCC
Confidence 541 25799999987653 2 3346899999765421 1345789999999999997777 443
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.17 E-value=1.1e-05 Score=72.15 Aligned_cols=98 Identities=11% Similarity=0.006 Sum_probs=68.9
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..++.+|||+||.+|.++..+++++. .|++||+.+ |-.... . ..++++++.|...+.++.++||+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~----~--------~~~V~~~~~d~~~~~~~~~~~D~v 274 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM----D--------TGQVTWLREDGFKFRPTRSNISWM 274 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH----T--------TTCEEEECSCTTTCCCCSSCEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc----c--------CCCeEEEeCccccccCCCCCcCEE
Confidence 45789999999999999999887766 599999864 222111 1 256899999998888777789999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|-.+.. +......+......+..++.++...
T Consensus 275 vsDm~~~---p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 275 VCDMVEK---PAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp EECCSSC---HHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred EEcCCCC---hHHhHHHHHHHHhccccceEEEEEE
Confidence 9977653 2233344444444445556655544
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.08 E-value=9.1e-06 Score=68.66 Aligned_cols=105 Identities=11% Similarity=-0.033 Sum_probs=60.8
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcc-eeEEEc-CCCCCCCCCCce
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKA-TNFFCV-PLQDFTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~-~~~~~~-d~~~~~~~~~~f 231 (284)
.+++.+|+|+||+.|.++...++.. ...|.|.++.... . ... ......+.+ +.|.++ |+.++. ...+
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P--~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEP--MLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCC--CCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCC--CcccCCCceEEEeeccCCccCCC--CCCC
Confidence 5689999999999999999766431 2234565554220 0 000 000000111 244446 887643 3579
Q ss_pred eEEEecchhccCChh--h---HHHHHHHHHhcCCCCc-EEEEEec
Q 023288 232 DVIWVQWCIGHLTDD--D---FVSFFKRAKVGLKPGG-FFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~--~---~~~~l~~~~r~LkpGG-~lii~e~ 270 (284)
|+|+|-..-. .+.. | ...++.-+.++|+||| .|++.=.
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 9999865432 2111 1 1125667779999999 8888543
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.07 E-value=1.7e-05 Score=68.17 Aligned_cols=107 Identities=10% Similarity=-0.003 Sum_probs=67.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD 232 (284)
..++.+|||+||++|.++..++.. +...|.|+|+...-.+.-+ ..+..+ ...+.+... |+..++. .++|
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~------w~lV~~~~~~Dv~~l~~--~~~D 162 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYG------WNIVTMKSGVDVFYRPS--ECCD 162 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTT------GGGEEEECSCCTTSSCC--CCCS
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcC------CcceEEEeccCHhhCCC--CCCC
Confidence 467789999999999999966644 3448999998653110000 000000 123667776 8766654 5699
Q ss_pred EEEecchhccCChhh-----HHHHHHHHHhcCCCC-cEEEEEecc
Q 023288 233 VIWVQWCIGHLTDDD-----FVSFFKRAKVGLKPG-GFFVLKENI 271 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~-----~~~~l~~~~r~LkpG-G~lii~e~~ 271 (284)
+|+|--. .--+.+. -..+|.-+.+.|++| |.|+|.=.+
T Consensus 163 ~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 163 TLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 9997655 3222211 123667778899999 899885443
No 294
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.07 E-value=9.3e-06 Score=69.89 Aligned_cols=72 Identities=17% Similarity=0.058 Sum_probs=59.2
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CCCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 229 (284)
+.++..++|++||.|..+..+++. ..+|+|+|.++.+++.|++ +.. .++.++.+++.++. ...+
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~---------~rv~lv~~~f~~l~~~L~~~g~~ 88 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL---------PGLTVVQGNFRHLKRHLAALGVE 88 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC---------TTEEEEESCGGGHHHHHHHTTCS
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc---------CCEEEEECCcchHHHHHHHcCCC
Confidence 557789999999999999999987 3479999999999999998 643 36889999988763 2225
Q ss_pred ceeEEEec
Q 023288 230 RYDVIWVQ 237 (284)
Q Consensus 230 ~fD~Iv~~ 237 (284)
+||.|++.
T Consensus 89 ~vDgIL~D 96 (285)
T 1wg8_A 89 RVDGILAD 96 (285)
T ss_dssp CEEEEEEE
T ss_pred CcCEEEeC
Confidence 79999964
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.95 E-value=1.3e-06 Score=95.60 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=56.6
Q ss_pred CCCceEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPET 228 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 228 (284)
.+..+|||||.|+|..+..++... +.+++.+|+|+.+.+.++++++. ..++....|..+. ++..
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---------~di~~~~~d~~~~~~~~~ 1309 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---------LHVTQGQWDPANPAPGSL 1309 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---------HTEEEECCCSSCCCC---
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---------cccccccccccccccCCC
Confidence 456899999999998877666542 23799999999988888777542 1122222233332 2244
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
++||+|++..++|..+ ++...+++++++|||||.+++.|.
T Consensus 1310 ~~ydlvia~~vl~~t~--~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLG--DPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --CCEEEEECC----------------------CCEEEEEEC
T ss_pred CceeEEEEcccccccc--cHHHHHHHHHHhcCCCcEEEEEec
Confidence 6899999999998766 667899999999999999999874
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.90 E-value=2.2e-05 Score=65.44 Aligned_cols=110 Identities=12% Similarity=0.016 Sum_probs=69.3
Q ss_pred CCCCceEEEeeccccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD 232 (284)
..++.+|||+||++|.++...+.. +...|.|+|+-..-.+.- ...+..| ...++|.++ |+..++. .++|
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~g------wn~v~fk~gvDv~~~~~--~~~D 146 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYG------WNIVKLMSGKDVFYLPP--EKCD 146 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTT------TTSEEEECSCCGGGCCC--CCCS
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcC------cCceEEEeccceeecCC--cccc
Confidence 567889999999999999966654 334899999865322100 0011111 245788888 8755543 5799
Q ss_pred EEEecchhccCC-hhh---HHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 233 VIWVQWCIGHLT-DDD---FVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 233 ~Iv~~~~l~~~~-~~~---~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
.|+|--.=..-. .-+ -..+|.-+.+.|++ |.|++.=.+.-.
T Consensus 147 tllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 147 TLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred EEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 999865432111 112 12367777899999 888886444433
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.77 E-value=0.00012 Score=69.00 Aligned_cols=108 Identities=17% Similarity=0.038 Sum_probs=72.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHh---C-----------CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIR---Y-----------FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP 220 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~---~-----------~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d 220 (284)
+.++.+|+|-+||+|.+....... . -..++|+|+++.+...|+-++--.+. ....+..+|
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~------~~~~I~~~d 288 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL------EYPRIDPEN 288 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC------SCCEEECSC
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC------ccccccccc
Confidence 566779999999999998766542 1 12599999999999999876543222 123456666
Q ss_pred CCCCCC----CCCceeEEEecchhccCCh--------------hhHHHHHHHHHhcCC-------CCcEEEEE
Q 023288 221 LQDFTP----ETGRYDVIWVQWCIGHLTD--------------DDFVSFFKRAKVGLK-------PGGFFVLK 268 (284)
Q Consensus 221 ~~~~~~----~~~~fD~Iv~~~~l~~~~~--------------~~~~~~l~~~~r~Lk-------pGG~lii~ 268 (284)
....+. +..+||+|+++..+..-.+ ..-..++..+.+.|| |||++.++
T Consensus 289 tL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 289 SLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp TTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred cccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 554332 2347999999876632110 012346777888886 79988876
No 298
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.68 E-value=0.00021 Score=63.41 Aligned_cols=115 Identities=9% Similarity=0.073 Sum_probs=83.8
Q ss_pred CCceEEEeeccccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCC-------C--C------CCCCcceeEEEcC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENH-------M--A------PDMHKATNFFCVP 220 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~-------~--~------~~~~~~~~~~~~d 220 (284)
+...|+.+|||.......+...+.. .++=||. |.+++.-++.+...+. . . .....+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999999988875443 5666776 7888777666543210 0 0 0012467788889
Q ss_pred CCCCC--------C-CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 221 LQDFT--------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 221 ~~~~~--------~-~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+.+.. . ......++++-.++.|++.+....+++.+.+.. |+|.+++.|.+.+
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 88732 1 234678999999999999999999999999987 8888888887655
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.60 E-value=0.00011 Score=64.04 Aligned_cols=59 Identities=19% Similarity=0.022 Sum_probs=45.6
Q ss_pred cHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCC
Q 023288 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 138 ~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~ 202 (284)
+..++..++... ..++..|||++||+|..+..++..+. +++|+|+++.+++.|++++..
T Consensus 221 p~~l~~~~i~~~-----~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 221 PLELAERLVRMF-----SFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CHHHHHHHHHHH-----CCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHH
Confidence 345555555432 24678999999999999998775554 699999999999999998753
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.55 E-value=0.00035 Score=62.96 Aligned_cols=102 Identities=19% Similarity=0.164 Sum_probs=73.7
Q ss_pred ceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC--------CCCc
Q 023288 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP--------ETGR 230 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~ 230 (284)
.+++|+-||.|.++..+...++..+.++|+++..++..+.++.. ..+++.|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPR-----------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTT-----------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCC-----------CceEecChhhcCHHHHHhhcccCCC
Confidence 57999999999999999988988889999999999999988643 4567788877642 2357
Q ss_pred eeEEEecchhccCC--------hh--hHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 231 YDVIWVQWCIGHLT--------DD--DFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 231 fD~Iv~~~~l~~~~--------~~--~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
+|+|+.......++ ++ .+-.-+-++...++| .+++.||+..
T Consensus 72 ~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P--~~~v~ENV~g 122 (376)
T 3g7u_A 72 IDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP--LFFLAENVPG 122 (376)
T ss_dssp CCEEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHCC--SEEEEEECTT
T ss_pred eeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCC--CEEEEecchH
Confidence 99999766544443 11 122223344555688 4777799754
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.24 E-value=0.0003 Score=62.63 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=68.6
Q ss_pred CceEEEeeccccHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC---CCcee
Q 023288 158 HLVALDCGSGIGRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---TGRYD 232 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD 232 (284)
..+|+|+-||.|.++..+...+ +..|.++|+++..++..+.++.. ..+++.|+.++... ...+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------~~~~~~Di~~~~~~~~~~~~~D 70 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------TQLLAKTIEGITLEEFDRLSFD 70 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECSCGGGCCHHHHHHHCCS
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------cccccCCHHHccHhHcCcCCcC
Confidence 3689999999999999998888 44799999999999999999754 34667888776421 12589
Q ss_pred EEEecchhccCChh-------h-HHHHHH---HHHhcCC--CCcEEEEEeccCC
Q 023288 233 VIWVQWCIGHLTDD-------D-FVSFFK---RAKVGLK--PGGFFVLKENIAR 273 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~-------~-~~~~l~---~~~r~Lk--pGG~lii~e~~~~ 273 (284)
+|+.......++.. + ...++. ++.+.++ |. +++.||+..
T Consensus 71 ~l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~ 122 (343)
T 1g55_A 71 MILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKG 122 (343)
T ss_dssp EEEECCC------------------CHHHHHHHHGGGCSSCCS--EEEEEEETT
T ss_pred EEEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcc
Confidence 99977654433211 1 112333 3444555 64 666688764
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.99 E-value=0.00069 Score=58.28 Aligned_cols=102 Identities=11% Similarity=-0.032 Sum_probs=77.3
Q ss_pred CceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC----CCCCCceeE
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF----TPETGRYDV 233 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD~ 233 (284)
+..+||+=+|+|.++..++++ ..+++.+|.++..++..++++.. ..+++++..|.... ..+..+||+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~--------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF--------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT--------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc--------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 456899999999999999974 47899999999999999999865 35688888885431 133357999
Q ss_pred EEecchhccCChhhHHHHHHHHHh--cCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKV--GLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r--~LkpGG~lii~e~ 270 (284)
|++--....-. +...+++.+.+ .+.|+|++++--.
T Consensus 163 VfiDPPYe~k~--~~~~vl~~L~~~~~r~~~Gi~v~WYP 199 (283)
T 2oo3_A 163 IFIDPSYERKE--EYKEIPYAIKNAYSKFSTGLYCVWYP 199 (283)
T ss_dssp EEECCCCCSTT--HHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred EEECCCCCCCc--HHHHHHHHHHHhCccCCCeEEEEEEe
Confidence 99988766422 55566666655 4678999888543
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.93 E-value=0.0074 Score=52.80 Aligned_cols=109 Identities=11% Similarity=-0.037 Sum_probs=77.4
Q ss_pred ceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---------CCCC
Q 023288 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---------PETG 229 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~ 229 (284)
..|++||||-=.....+.......|+=|| -|..++..++.+...+. ....+..++.+|+.+ . +...
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGV---TPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTC---CCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCC---CCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 46999999976554444311113688899 59999999888853221 013467788889876 3 1223
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
.-=++++-.+++|+++++...+++.+...+.||+.+++ |.+..
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~-d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAV-ETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEE-ECCCT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEE-EecCC
Confidence 45678888999999999999999999999999988777 44443
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.91 E-value=0.0029 Score=55.88 Aligned_cols=101 Identities=14% Similarity=0.025 Sum_probs=70.2
Q ss_pred CceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC-CCceeEEEe
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWV 236 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~Iv~ 236 (284)
+.+++|+-||.|.++..+...++..+.++|+++..++..+.++... . +.|+.++... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~--------~-----~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK--------P-----EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC--------C-----BSCGGGSCGGGSCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC--------C-----cCCHHHcCHhhCCCCCEEEE
Confidence 4789999999999999999888888999999999999999997642 1 4666655321 125899996
Q ss_pred cchhccCCh---------h--hHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 237 QWCIGHLTD---------D--DFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 237 ~~~l~~~~~---------~--~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
......++. + .+-.-+-++.+.++|. +++.||+..
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~g 123 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKN 123 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGG
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHH
Confidence 644333321 1 1222333445556884 777798753
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.90 E-value=0.002 Score=57.48 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=49.4
Q ss_pred CCceEEEeeccccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF 224 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~ 224 (284)
++..|||||.|.|.+|..|+... +.+|+++|+.+.++...++.. . ..+++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--------GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--------TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--------CCCEEEEECCccch
Confidence 35789999999999999999763 457999999999999999886 2 24688899998654
No 306
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.86 E-value=0.001 Score=58.64 Aligned_cols=73 Identities=12% Similarity=0.182 Sum_probs=56.5
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
..++..++|..||.|..+..+++...+ +|+|+|.++.+++.++ ++. ..+++++.+++.++. ..
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---------~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---------DPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---------CTTEEEEESCGGGHHHHHHHTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---------CCcEEEEeCCHHHHHHHHHhcC
Confidence 567889999999999999999976432 7999999999999994 442 356889998887753 11
Q ss_pred -CCceeEEEec
Q 023288 228 -TGRYDVIWVQ 237 (284)
Q Consensus 228 -~~~fD~Iv~~ 237 (284)
.+++|.|+..
T Consensus 125 ~~~~vDgILfD 135 (347)
T 3tka_A 125 LIGKIDGILLD 135 (347)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCcccEEEEC
Confidence 1368999844
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.86 E-value=0.002 Score=54.83 Aligned_cols=59 Identities=14% Similarity=0.131 Sum_probs=46.0
Q ss_pred cHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCC
Q 023288 138 SEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 138 ~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~ 202 (284)
+..++..++... ..++..|||..||+|..+...... ..+++|+|+++.+++.+++++..
T Consensus 198 p~~l~~~~i~~~-----~~~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 198 PRDLIERIIRAS-----SNPNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CHHHHHHHHHHH-----CCTTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHh
Confidence 345555555433 347789999999999999976644 45799999999999999999865
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.51 E-value=0.0056 Score=53.98 Aligned_cols=105 Identities=11% Similarity=0.014 Sum_probs=72.1
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcE-EEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC---CCCc
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEV-DLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGR 230 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v-~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 230 (284)
...+++|+-||.|.++..+...++ ..+ .++|+++..++..+.++... +++.|+.++.. +...
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------------~~~~DI~~~~~~~i~~~~ 76 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------------VQVKNLDSISIKQIESLN 76 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------------CBCCCTTTCCHHHHHHTC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------------cccCChhhcCHHHhccCC
Confidence 467999999999999999887775 456 79999999999999997541 45677777652 1236
Q ss_pred eeEEEecchhccC--C--------hhhHHHHHHHHHh-cCCC---CcEEEEEeccCC
Q 023288 231 YDVIWVQWCIGHL--T--------DDDFVSFFKRAKV-GLKP---GGFFVLKENIAR 273 (284)
Q Consensus 231 fD~Iv~~~~l~~~--~--------~~~~~~~l~~~~r-~Lkp---GG~lii~e~~~~ 273 (284)
+|+++.......+ + .+....++.++.+ +++. --.+++.||+..
T Consensus 77 ~Dil~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g 133 (327)
T 3qv2_A 77 CNTWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL 133 (327)
T ss_dssp CCEEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG
T ss_pred CCEEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh
Confidence 8999976554444 1 1122245555555 4432 135788899753
No 309
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.43 E-value=0.0057 Score=52.65 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=59.0
Q ss_pred CCCCceEEEeec------cccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC
Q 023288 155 NNQHLVALDCGS------GIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP 226 (284)
Q Consensus 155 ~~~~~~VLDiGc------GtG~~s~~l~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 226 (284)
.+.+.+|||+|+ -+|.+. +.+.+.. .|+++|+.+-.. .. ..++++|......
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~s-----------------da-~~~IqGD~~~~~~ 166 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFVS-----------------DA-DSTLIGDCATVHT 166 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCBC-----------------SS-SEEEESCGGGEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCccccc-----------------CC-CeEEEcccccccc
Confidence 567899999996 677632 2222332 699999864210 11 1458888765433
Q ss_pred CCCceeEEEecchh---ccCChhh------HHHHHHHHHhcCCCCcEEEEE
Q 023288 227 ETGRYDVIWVQWCI---GHLTDDD------FVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l---~~~~~~~------~~~~l~~~~r~LkpGG~lii~ 268 (284)
.++||+|+|-..- .+...+. .+.++.-+.+.|+|||.|++.
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 3689999965421 2211111 445677778899999999997
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.31 E-value=0.008 Score=53.13 Aligned_cols=102 Identities=20% Similarity=0.149 Sum_probs=69.0
Q ss_pred ceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC---CCCceeE
Q 023288 159 LVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP---ETGRYDV 233 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~ 233 (284)
.+++|+-||.|.++..+...++ ..|.++|+++..++..+.++.. ..+...|+.++.. +...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----------~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----------TNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----------CceeccccccCCHHHhccCCCCE
Confidence 5899999999999999887776 4688999999999999998754 2356677776642 2236899
Q ss_pred EEecchhccCCh-------hh-HHHHHH---HHHhcCC-CCcEEEEEeccCC
Q 023288 234 IWVQWCIGHLTD-------DD-FVSFFK---RAKVGLK-PGGFFVLKENIAR 273 (284)
Q Consensus 234 Iv~~~~l~~~~~-------~~-~~~~l~---~~~r~Lk-pGG~lii~e~~~~ 273 (284)
++.......++. ++ ...++. ++.+.++ | .+++.||+..
T Consensus 73 l~ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~g 122 (333)
T 4h0n_A 73 ILMSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKG 122 (333)
T ss_dssp EEECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTT
T ss_pred EEecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchh
Confidence 996544333310 11 112223 3444454 6 5788899864
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.30 E-value=0.021 Score=49.50 Aligned_cols=108 Identities=16% Similarity=0.069 Sum_probs=73.3
Q ss_pred CCCCceEEEeeccccHHHHHHHHhCCCc--EEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC----C
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRYFNE--VDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE----T 228 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~~~~--v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~ 228 (284)
.....+++|+=||.|.++..+...++.. |.++|+++..++..+.++.. ..+...|+.++... .
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~-----------~~~~~~DI~~i~~~~i~~~ 81 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQG-----------KIMYVGDVRSVTQKHIQEW 81 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTT-----------CEEEECCGGGCCHHHHHHT
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCC-----------CceeCCChHHccHHHhccc
Confidence 4566799999999999999988888874 69999999999988887643 34677888776421 1
Q ss_pred CceeEEEecchhccC----------Chh--hHHHHHHHHHhcCCCC-cE----EEEEeccCC
Q 023288 229 GRYDVIWVQWCIGHL----------TDD--DFVSFFKRAKVGLKPG-GF----FVLKENIAR 273 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~----------~~~--~~~~~l~~~~r~LkpG-G~----lii~e~~~~ 273 (284)
+.+|+++.......+ .++ .+-.-+-++.+.++|. |. +++.||+..
T Consensus 82 ~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~rii~~~~P~~~~~~P~~~l~ENV~g 143 (295)
T 2qrv_A 82 GPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVA 143 (295)
T ss_dssp CCCSEEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHHHHHHHHSCCTTCCCCCEEEEEEESS
T ss_pred CCcCEEEecCCCccccccCccccccccccchhHHHHHHHHHHhCcccccCCccEEEEEcCcc
Confidence 369999965322211 111 1222334455556776 32 777799864
No 312
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.09 E-value=0.021 Score=45.89 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=60.5
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+||..|+ |.|..+..++.....+|+++|.+++.++.+++. +. .. . .|..+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~-------~~-~--~d~~~~~~~~~~~~ 101 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GV-------EY-V--GDSRSVDFADEILE 101 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CC-------SE-E--EETTCSTHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC-------CE-E--eeCCcHHHHHHHHH
Confidence 557789999994 567777666654344799999999988877642 11 01 1 1222111
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 102 ~~~~~~~D~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 102 LTDGYGVDVVLNSLA-------G--EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HTTTCCEEEEEECCC-------T--HHHHHHHHTEEEEEEEEECS
T ss_pred HhCCCCCeEEEECCc-------h--HHHHHHHHHhccCCEEEEEc
Confidence 11236999996542 1 46788889999999998864
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.93 E-value=0.023 Score=50.68 Aligned_cols=96 Identities=14% Similarity=-0.014 Sum_probs=65.3
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-----CCC
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TPE 227 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~ 227 (284)
..++.+||-+|||. |..+..+++.... .|+++|.++..++.+++.-.. ..+...-.++ ...
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT------------HVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCC------------EEecCCccCHHHHHHHhc
Confidence 56788999999986 8888888775443 699999999999999865322 1111111111 011
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.+.||+|+-+-.- . ..+..+.+.|+|||++++.-.
T Consensus 256 ~gg~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 256 DGGVNFALESTGS------P--EILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TSCEEEEEECSCC------H--HHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCC------H--HHHHHHHHHHhcCCEEEEeCC
Confidence 2379999854331 1 567888999999999988643
No 314
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.85 E-value=0.018 Score=53.48 Aligned_cols=107 Identities=18% Similarity=0.092 Sum_probs=70.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC---------
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE--------- 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------- 227 (284)
...+++|+=||.|.++..+...++..|.++|+++...+.-+.++... +...+++.|+.++...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--------p~~~~~~~DI~~i~~~~~~~~~~~~ 158 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--------PATHHFNEDIRDITLSHQEGVSDEA 158 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--------TTTCEEESCTHHHHCTTCTTSCHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--------CCcceeccchhhhhhccccccchhh
Confidence 45799999999999999888777777999999999999998887431 2234566776654311
Q ss_pred --------CCceeEEEecchhccCChh--------------------hHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 228 --------TGRYDVIWVQWCIGHLTDD--------------------DFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 228 --------~~~fD~Iv~~~~l~~~~~~--------------------~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
...+|+|+.......++.. .+-.-+-++.+.++| .+++.||+..
T Consensus 159 ~~~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rP--k~fvlENV~g 230 (482)
T 3me5_A 159 AAEHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP--AMFVLENVKN 230 (482)
T ss_dssp HHHHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCC--SEEEEEEETT
T ss_pred HHhhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCC--cEEEEeCcHH
Confidence 1358999865544433211 111222334445677 4777899764
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.83 E-value=0.018 Score=51.96 Aligned_cols=102 Identities=9% Similarity=-0.129 Sum_probs=65.1
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C------
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------ 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~------ 225 (284)
..++.+||-+|||. |.++..+++.... +|+++|.|+..++.+++.- .+.+...-.++ .
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG-------------a~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG-------------FETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT-------------CEEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC-------------CcEEcCCCcchHHHHHHHH
Confidence 56788999999986 8888888875444 7999999999999887531 11221111111 0
Q ss_pred CCCCceeEEEecchhccCC------hhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLT------DDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~------~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....||+|+-.-.-.... .......+..+.+.|+|||++++.-
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 0112699998654322100 0001146888899999999998753
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.76 E-value=0.15 Score=43.10 Aligned_cols=105 Identities=11% Similarity=0.122 Sum_probs=67.4
Q ss_pred CCceEEEeeccccHHHHHHHHh-------CC-CcEEEEe-----CCHH----------------------HHHH---HHH
Q 023288 157 QHLVALDCGSGIGRITKNLLIR-------YF-NEVDLLE-----PVSH----------------------FLDA---ARE 198 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~-------~~-~~v~gvD-----~S~~----------------------~l~~---ar~ 198 (284)
-++.|+|+||-.|..+..++.- +. .+|+++| +.+. .++. ..+
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4678999999999988876531 12 3899999 3221 1111 111
Q ss_pred HcCCCCCCCCCCCcceeEEEcCCCCCC------CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 199 SLAPENHMAPDMHKATNFFCVPLQDFT------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+....+. ...+++++.+++.+.- .+..+||+|+.-.-. + +.....+..+...|+|||++++-|
T Consensus 149 ~~~~~g~----~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y---~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 149 CSDFFGH----VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y---EPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp TTSTTTT----SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H---HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhhhcCC----CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c---chHHHHHHHHHHHhCCCcEEEEcC
Confidence 1222111 1367999999886632 234579999976642 1 234468899999999999988855
No 317
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.72 E-value=0.029 Score=49.07 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=70.5
Q ss_pred ceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC-CCceeEEEec
Q 023288 159 LVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVIWVQ 237 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~Iv~~ 237 (284)
++|+|+=||.|.++..+-..++.-+.++|+++...+.-+.++.. .++..|+.++... -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~------------~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSA------------KLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCS------------EEEESCGGGCCGGGSCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCC------------CcccCChhhCCHhhCCcccEEEec
Confidence 37999999999999998888888889999999999998888642 4667888876522 2368999965
Q ss_pred chhccC---------Chhh--HHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 238 WCIGHL---------TDDD--FVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 238 ~~l~~~---------~~~~--~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
.....+ .++. +-.-+-++.+.++|. +++.||+.
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~ 112 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVK 112 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECC
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeec
Confidence 433222 1111 222333455567884 77779975
No 318
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.65 E-value=0.046 Score=49.15 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=53.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhC------CC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY------FN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE 227 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~------~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 227 (284)
+.+..|+|+|.|.|.++..+++.. .. +++.||+|+...+.-++++... .++.+. .++.+++.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--------~~v~W~-~~l~~lp~- 148 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--------RNIHWH-DSFEDVPE- 148 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--------SSEEEE-SSGGGSCC-
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--------CCeEEe-CChhhcCC-
Confidence 346789999999999999887531 11 7999999999998777776542 134433 23444431
Q ss_pred CCceeEEEecchhccCCh
Q 023288 228 TGRYDVIWVQWCIGHLTD 245 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~ 245 (284)
..-+|+++.+|..+|-
T Consensus 149 --~~~~viANE~fDAlPv 164 (387)
T 1zkd_A 149 --GPAVILANEYFDVLPI 164 (387)
T ss_dssp --SSEEEEEESSGGGSCC
T ss_pred --CCeEEEeccccccCce
Confidence 2457778888877773
No 319
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.65 E-value=0.066 Score=47.72 Aligned_cols=99 Identities=18% Similarity=0.030 Sum_probs=65.4
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCC----CC-CCCC
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL----QD-FTPE 227 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~----~~-~~~~ 227 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-... .+++...++ .+ ....
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---------vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---------TVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---------EECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---------EECCCCcCHHHHHHhhhhcc
Confidence 56788999999875 7788888776554 7999999999999988753220 011000111 00 0012
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.+.+|+|+-+-.- . ..++.+.+.|+|||++++.-.
T Consensus 251 ~gg~Dvvid~~G~------~--~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAGV------A--ETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSCC------H--HHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCC------H--HHHHHHHHHhccCCEEEEEec
Confidence 2479999964321 1 577888999999999998643
No 320
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.60 E-value=0.033 Score=48.93 Aligned_cols=95 Identities=18% Similarity=0.069 Sum_probs=65.2
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCC
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 229 (284)
..++.+||-+|+|. |..+..+++....+|+++|.|++-++.+++.-.. ..+...-.++. -..+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~~~g 231 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE------------VAVNARDTDPAAWLQKEIG 231 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC------------EEEeCCCcCHHHHHHHhCC
Confidence 56788999999985 8888888876555899999999999998775322 11111111110 0113
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+|+|+.... . . ..++.+.+.|+|||++++.-
T Consensus 232 ~~d~vid~~g----~--~--~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 232 GAHGVLVTAV----S--P--KAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SEEEEEESSC----C--H--HHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEEeCC----C--H--HHHHHHHHHhccCCEEEEeC
Confidence 6898885432 1 1 57788889999999998863
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.49 E-value=0.018 Score=50.79 Aligned_cols=92 Identities=15% Similarity=0.027 Sum_probs=64.6
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
..++.+||-+|+|. |..+..+++....+|+++|.|+.-++.+++.-.. . .+ .+...+ . ..+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-----------~-v~-~~~~~~--~-~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-----------H-FY-TDPKQC--K-EELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCS-----------E-EE-SSGGGC--C-SCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCC-----------e-ec-CCHHHH--h-cCCCE
Confidence 56788999999975 8888888876555899999999999988774221 1 11 222222 1 27999
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+-+-.- + ..+..+.+.|+|||++++.-.
T Consensus 238 vid~~g~-----~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIPT-----H---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCCS-----C---CCHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCc-----H---HHHHHHHHHHhcCCEEEEECC
Confidence 9854331 1 256778889999999998743
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.36 E-value=0.044 Score=47.94 Aligned_cols=92 Identities=9% Similarity=0.021 Sum_probs=62.3
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC---CC----
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD---FT---- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~---~~---- 225 (284)
..++.+||-.|| |.|..+..++.....+|+++|.++..++.+++. .. .. . .|..+ +.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~----------~~-~--~d~~~~~~~~~~~~ 208 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GF----------DA-A--FNYKTVNSLEEALK 208 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TC----------SE-E--EETTSCSCHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CC----------cE-E--EecCCHHHHHHHHH
Confidence 567889999998 677777777765555799999999998888443 21 01 1 12221 10
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...+.+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 209 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 209 KASPDGYDCYFDNVG-------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHCTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHhCCCCeEEEECCC-------h--HHHHHHHHHHhcCCEEEEEe
Confidence 01147999986554 1 34778889999999998864
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.36 E-value=0.13 Score=45.52 Aligned_cols=95 Identities=18% Similarity=0.118 Sum_probs=63.5
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC---CCCC----C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP---LQDF----T 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d---~~~~----~ 225 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. ..+..+ -.++ .
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD------------LVLQISKESPQEIARKVE 236 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS------------EEEECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC------------EEEcCcccccchHHHHHH
Confidence 56788999999985 8888888876554 799999999999998764221 111111 0000 0
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-.- . ..+..+.+.|+|||++++.-
T Consensus 237 ~~~~~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGA------E--ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHTSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEe
Confidence 001469999854331 1 46778889999999998864
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.23 E-value=0.1 Score=45.97 Aligned_cols=95 Identities=15% Similarity=-0.005 Sum_probs=63.3
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC-CCCCC------C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d-~~~~~------~ 226 (284)
..++.+||-+|+|. |..+..+++....+|+++|.++.-++.+++.-.. ..+... -.++. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD------------VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS------------EEEECCTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC------------EEEcCcccccHHHHHHHHh
Confidence 56788999999874 7778878776555699999999999998764221 111111 01110 0
Q ss_pred C---CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 E---TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~---~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
. ...+|+|+-+-.- . ..++.+.+.|+|||++++.-
T Consensus 234 ~~~~g~g~D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN------E--KCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCCC------H--HHHHHHHHHHhcCCEEEEEe
Confidence 0 1469999854331 1 46778889999999998864
No 325
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.22 E-value=0.055 Score=47.36 Aligned_cols=95 Identities=11% Similarity=-0.011 Sum_probs=63.8
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
..++.+||-+|| |.|..+..+++....+|++++.++.-++.+.+.+... ..+...-.++. ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~ 215 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD-----------GAIDYKNEDLAAGLKREC 215 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS-----------EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC-----------EEEECCCHHHHHHHHHhc
Confidence 567889999998 5788888887765558999999999888884433210 11111111110 01
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+.+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 216 ~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 PKGIDVFFDNVG-------G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCCceEEEECCC-------c--chHHHHHHHHhhCCEEEEEe
Confidence 246999986443 1 36788889999999999863
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.20 E-value=0.12 Score=45.79 Aligned_cols=97 Identities=20% Similarity=0.046 Sum_probs=65.6
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCC--CCCC-----
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL--QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~--~~~~----- 225 (284)
..++.+||=+|+|. |..+..+++.... .|+++|.|+.-++.+++. ... .+.+...+. .++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---------~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---------VVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---------CEEEECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---------cccccccccchHHHHHHHHH
Confidence 56788999999875 7888888876554 599999999999999987 321 122221110 0000
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-.- . ..+..+.+.|+|||++++.-
T Consensus 247 ~t~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV------E--SSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC------H--HHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC------h--HHHHHHHHHhcCCCEEEEEc
Confidence 112479999864331 1 46788889999999999864
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.18 E-value=0.033 Score=49.50 Aligned_cols=96 Identities=14% Similarity=-0.059 Sum_probs=65.4
Q ss_pred cCCCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 154 RNNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 154 ~~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
...++.+||-+|+|. |..+..+++....+|+++|.++.-++.+++.-.. ..+..+-.++. .
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD------------HGINRLEEDWVERVYALT 253 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC------------EEEcCCcccHHHHHHHHh
Confidence 366788999999885 7788878876555899999999999998775322 11211111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+-+-. . ..+..+.+.|+|||.+++.-.
T Consensus 254 ~g~g~D~vid~~g----~-----~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 254 GDRGADHILEIAG----G-----AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp TTCCEEEEEEETT----S-----SCHHHHHHHEEEEEEEEEECC
T ss_pred CCCCceEEEECCC----h-----HHHHHHHHHhhcCCEEEEEec
Confidence 1237999986543 1 246677789999999998754
No 328
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.09 E-value=0.066 Score=47.00 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=63.9
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCCCCCC-----C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFT-----P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~~~~~-----~ 226 (284)
..++.+||-.|| |.|..+..++.....+|++++.++..++.+++.+... ..+. .+..++. .
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-----------~~~d~~~~~~~~~~~~~~ 221 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-----------DAFNYKEESDLTAALKRC 221 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-----------EEEETTSCSCSHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-----------eEEecCCHHHHHHHHHHH
Confidence 567889999997 5788888777755557999999999988887543210 1111 1111110 0
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
..+.+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 222 ~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 222 FPNGIDIYFENVG-------G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CTTCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred hCCCCcEEEECCC-------H--HHHHHHHHHHhcCCEEEEEc
Confidence 1246999986543 2 36788889999999998863
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.08 E-value=0.064 Score=47.31 Aligned_cols=96 Identities=16% Similarity=-0.009 Sum_probs=64.9
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. .++...-.++. .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT------------DIINYKNGDIVEQILKAT 231 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC------------EEECGGGSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc------------eEEcCCCcCHHHHHHHHc
Confidence 56788999999885 7888888876554 799999999999999876332 11111101110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+-+-.- . ..+..+.+.|+|||++++.-.
T Consensus 232 ~g~g~D~v~d~~g~------~--~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 232 DGKGVDKVVIAGGD------V--HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTCCEEEEEECSSC------T--THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCCEEEECCCC------h--HHHHHHHHHHhcCCEEEEecc
Confidence 12369999854321 1 467888899999999988643
No 330
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.97 E-value=0.05 Score=47.29 Aligned_cols=108 Identities=14% Similarity=0.064 Sum_probs=59.7
Q ss_pred CCCceEEEeeccccHHHHHHH----HhCCC---cEEEEeCC------------HHHHHHHHHHcCCCCCCCCCCCcceeE
Q 023288 156 NQHLVALDCGSGIGRITKNLL----IRYFN---EVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNF 216 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~----~~~~~---~v~gvD~S------------~~~l~~ar~~~~~~~~~~~~~~~~~~~ 216 (284)
.+..+|||+|-|||......+ +.... +++.+|.. ....+......... .......++
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~----~~~~v~L~l 170 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY----EGERLSLKV 170 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE----ECSSEEEEE
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc----cCCcEEEEE
Confidence 355789999999998654322 22332 45666632 11122222221110 000234566
Q ss_pred EEcCCCCC-C-CCCCceeEEEecch-hccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 217 FCVPLQDF-T-PETGRYDVIWVQWC-IGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 217 ~~~d~~~~-~-~~~~~fD~Iv~~~~-l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
..+|+.+. + ++...||+|+.-.. -..-|+-=-..+++.++++++|||+|+-
T Consensus 171 ~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 171 LLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp EESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred EechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 77777543 2 33457999997542 1111110124799999999999998874
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.96 E-value=0.12 Score=46.37 Aligned_cols=100 Identities=9% Similarity=-0.088 Sum_probs=65.5
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CC------
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT------ 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~------ 225 (284)
..++.+||-+|||. |.++..+++.... .|+++|.++.-++.+++.-. +.+...-.+ +.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-------------~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-------------EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------------EEEETTSSSCHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-------------cEEccCCcchHHHHHHHH
Confidence 56788999999875 8888888876544 79999999999999976421 111111001 00
Q ss_pred CCCCceeEEEecchhc---------cCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 PETGRYDVIWVQWCIG---------HLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~---------~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-.-. |.+ +....++.+.+.|++||++++.-
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHE--APATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSB--CTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCccccccccccccc--chHHHHHHHHHHHhcCCEEEEec
Confidence 0123699999543321 111 12257888999999999998764
No 332
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.95 E-value=0.069 Score=46.89 Aligned_cols=95 Identities=13% Similarity=-0.025 Sum_probs=61.9
Q ss_pred CCCCceEEEeecc--ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGSG--IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+||| .|..+..+++....+|+++|.++.-++.+++.-.. ..+...-.++. .
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~------------~~~~~~~~~~~~~~~~~~ 209 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA------------YVIDTSTAPLYETVMELT 209 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc------------EEEeCCcccHHHHHHHHh
Confidence 6678899999987 67777777765445799999999999988875321 11111111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+.+-.- ..+....+.|+|||.+++.-.
T Consensus 210 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 210 NGIGADAAIDSIGG---------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TTSCEEEEEESSCH---------HHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCcEEEECCCC---------hhHHHHHHHhcCCCEEEEEee
Confidence 12479999865431 122334489999999998743
No 333
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.76 E-value=0.14 Score=44.70 Aligned_cols=95 Identities=20% Similarity=0.123 Sum_probs=64.0
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+...-.++. .
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE------------YLINASKEDILRQVLKFT 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc------------EEEeCCCchHHHHHHHHh
Confidence 567889999994 577888878776555899999999999988764211 11111111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+.+-.- ..+..+.+.|+|||++++.-.
T Consensus 214 ~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 214 NGKGVDASFDSVGK---------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TTSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCCceEEEECCCh---------HHHHHHHHHhccCCEEEEEcC
Confidence 12469999865441 356777889999999998643
No 334
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.59 E-value=0.34 Score=43.55 Aligned_cols=100 Identities=12% Similarity=-0.053 Sum_probs=60.9
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||=+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. ..+...-.++. .
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD------------HVIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS------------EEECTTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC------------EEEcCCCCCHHHHHHHHh
Confidence 56788999999874 7777777766554 899999999999999876322 11111111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
....+|+|+-+-.-. ......+++.+.+.+++||++++.-
T Consensus 279 ~g~g~D~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 279 NGLGAKLFLEATGVP---QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TTCCCSEEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 123699998543311 0011233333345559999999864
No 335
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.50 E-value=0.023 Score=50.68 Aligned_cols=95 Identities=16% Similarity=0.023 Sum_probs=62.7
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC-CCCCCCCCCcee
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP-LQDFTPETGRYD 232 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~fD 232 (284)
..++.+||-+|+|. |..+..+++....+|+++|.|+.-++.+++.-.. .-++....+ +.... +.+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~---------~vi~~~~~~~~~~~~---~g~D 259 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD---------EVVNSRNADEMAAHL---KSFD 259 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS---------EEEETTCHHHHHTTT---TCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEeccccHHHHHHhh---cCCC
Confidence 56788999999984 7888888876555799999999999998864221 001100001 11111 4799
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|+-.-.- + ..++.+.+.|+|||.+++.-
T Consensus 260 vvid~~g~-----~---~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 260 FILNTVAA-----P---HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEECCSS-----C---CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCC-----H---HHHHHHHHHhccCCEEEEec
Confidence 99854431 1 24567788999999988763
No 336
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.28 E-value=0.17 Score=44.65 Aligned_cols=92 Identities=13% Similarity=0.063 Sum_probs=62.0
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+||-.|+ |.|..+..+++....+|++++.++..++.+++.-.. ..+ |..+..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~~~--d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH------------EVF--NHREVNYIDKIKK 233 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEE--ETTSTTHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC------------EEE--eCCCchHHHHHHH
Confidence 567889999997 577777777766555799999999988877654211 111 211111
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+.+-. . ..+..+.+.|+|||++++.-
T Consensus 234 ~~~~~~~D~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLA-------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCH-------H--HHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCC-------h--HHHHHHHHhccCCCEEEEEe
Confidence 11236999986644 1 34667789999999998764
No 337
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.27 E-value=0.14 Score=44.54 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=63.9
Q ss_pred CCCCceEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+| .|.|..+..+++....+|++++.+++-++.+++.-.. ..+...-.++. .
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW------------ETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEeCCCccHHHHHHHHh
Confidence 56788999998 3578888877775445799999999999998865321 11111111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+.+-. . ..+..+.+.|+|||++++.-.
T Consensus 206 ~~~g~Dvvid~~g-------~--~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 206 DGKKCPVVYDGVG-------Q--DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp TTCCEEEEEESSC-------G--GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCCceEEEECCC-------h--HHHHHHHHHhcCCCEEEEEec
Confidence 2247999986543 1 356678889999999998743
No 338
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.25 E-value=0.093 Score=46.12 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=63.8
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. ..+..+ .++. .
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~------------~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGAD------------IVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS------------EEEESS-TTHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEecCc-hhHHHHHHHHh
Confidence 567889999997 578888888876555899999999999988875321 112222 2211 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
....+|+|+.+-.- ..+..+.+.|+|||.+++.-
T Consensus 224 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 GGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 12369999865431 24677888999999999864
No 339
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.25 E-value=0.14 Score=44.86 Aligned_cols=93 Identities=18% Similarity=0.076 Sum_probs=62.6
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC------
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------ 227 (284)
..++.+||-+|+| .|..+..+++....+|+++|.++.-++.+++.-.. .. .|..+..+.
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~--~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD------------LV--VNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS------------EE--ECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC------------EE--ecCCCccHHHHHHHH
Confidence 4577899999986 57777777766555899999999999988753211 11 122211100
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+.+|+|+.+-.. ...++.+.+.|++||++++.-
T Consensus 228 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 228 VGGVHAAVVTAVS--------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HSSEEEEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred hCCCCEEEECCCC--------HHHHHHHHHHhhcCCEEEEec
Confidence 0369999865431 146778889999999998763
No 340
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.22 E-value=0.099 Score=45.99 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=62.8
Q ss_pred CCCCceEEEeecc--ccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-----CC
Q 023288 155 NNQHLVALDCGSG--IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----TP 226 (284)
Q Consensus 155 ~~~~~~VLDiGcG--tG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~ 226 (284)
..++.+||-.|+| .|..+..+++.. ..+|+++|.++..++.+++.-.. ..+...-.+. ..
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD------------YVINASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC------------EEecCCCccHHHHHHHH
Confidence 5678899999998 666666676654 44799999999999988764211 1111110111 01
Q ss_pred CC-CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ET-GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~-~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.. +.+|+|+.+-.- . ..++.+.+.|+|+|.+++.-.
T Consensus 236 ~~~~~~d~vi~~~g~------~--~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS------E--KTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TTTSCEEEEEESCCC------H--HHHTTGGGGEEEEEEEEECCS
T ss_pred hcCCCceEEEECCCC------H--HHHHHHHHHHhcCCEEEEECC
Confidence 11 479999865431 1 467888899999999988643
No 341
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.22 E-value=0.016 Score=51.13 Aligned_cols=95 Identities=15% Similarity=-0.033 Sum_probs=62.3
Q ss_pred CCceEEEeeccc-cHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCC-CCCCCCCCce
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRY--FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPL-QDFTPETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~--~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~-~~~~~~~~~f 231 (284)
++.+||-+|+|. |..+..+++.. ..+|+++|.|+.-++.+++.-.. .-++... .+. ..+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGAD---------YVSEMKDAESLINKLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCS---------EEECHHHHHHHHHHHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCC---------EEeccccchHHHHHhh-cCCCc
Confidence 678999999974 77777777655 44799999999999999875321 0011100 110 0111 12379
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|+-+-.- . ..++.+.+.|+|||++++.-
T Consensus 240 D~vid~~g~------~--~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDLVGT------E--ETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEESSCC------H--HHHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCCC------h--HHHHHHHHHhhcCCEEEEeC
Confidence 999865431 1 46788889999999998864
No 342
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.14 E-value=0.082 Score=47.92 Aligned_cols=48 Identities=23% Similarity=0.320 Sum_probs=40.5
Q ss_pred CCCCceEEEeeccccHHHHHHH-HhCC--CcEEEEeCCHHHHHHHHHHcCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLL-IRYF--NEVDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~-~~~~--~~v~gvD~S~~~l~~ar~~~~~ 202 (284)
..++..++|+||+.|..+..++ .... .+|+++|++|...+..+++...
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4678899999999999999877 3443 4899999999999999988754
No 343
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.14 E-value=0.17 Score=44.33 Aligned_cols=93 Identities=11% Similarity=-0.024 Sum_probs=63.8
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+||-+|+ |.|..+..+++....+|++++.++..++.+++.-.. ..+ |..+..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~------------~~~--d~~~~~~~~~~~~ 229 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD------------ETV--NYTHPDWPKEVRR 229 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEE--ETTSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC------------EEE--cCCcccHHHHHHH
Confidence 567889999998 678888888876555799999999999988764211 111 221111
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.....+|+|+.+-. . ..++.+.+.|+++|++++.-.
T Consensus 230 ~~~~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp HTTTTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEESSC
T ss_pred HhCCCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEEec
Confidence 11247999986554 1 246677888999999988643
No 344
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.07 E-value=0.088 Score=45.74 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=61.6
Q ss_pred eEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCceeEEEe
Q 023288 160 VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGRYDVIWV 236 (284)
Q Consensus 160 ~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~Iv~ 236 (284)
+||=+|+ |.|..+..+++....+|++++.|++-++.+++.-.. .-++ ..+.... ....+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~---------~vi~--~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGAN---------RILS--RDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCS---------EEEE--GGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEe--cCCHHHHHhhcCCCccEEEE
Confidence 4999997 578888888876555899999999999999875322 0011 1111111 122357999875
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+-. . ..+..+.+.|+|+|++++.-.
T Consensus 218 ~~g-------~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 218 TVG-------D--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp SSC-------H--HHHHHHHHTEEEEEEEEECCC
T ss_pred CCC-------c--HHHHHHHHHHhcCCEEEEEec
Confidence 432 2 378889999999999998643
No 345
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.03 E-value=0.084 Score=46.39 Aligned_cols=95 Identities=15% Similarity=-0.001 Sum_probs=65.1
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-+|+|. |..+..+++.. ..+|+++|.+++-++.+++.-.. .++..+ .++. .
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~------------~~i~~~-~~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD------------AAVKSG-AGAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS------------EEEECS-TTHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCC-CcHHHHHHHHh
Confidence 56788999999975 88888888654 56899999999999999875322 111111 1110 0
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+-+-.- . ..++.+.+.|+|||++++.-.
T Consensus 236 ~g~g~d~v~d~~G~------~--~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 236 GGQGATAVFDFVGA------Q--STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGGCEEEEEESSCC------H--HHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCeEEEECCCC------H--HHHHHHHHHHhcCCEEEEECC
Confidence 11269999864331 1 478889999999999998743
No 346
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.01 E-value=0.063 Score=46.56 Aligned_cols=89 Identities=17% Similarity=0.103 Sum_probs=59.8
Q ss_pred cCCCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCcee
Q 023288 154 RNNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYD 232 (284)
Q Consensus 154 ~~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 232 (284)
...++.+||=+|+| .|..+..+++....+|++++ |++-++.+++.-.. ..+ .|...+ ...+|
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~-~d~~~v---~~g~D 201 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR------------HLY-REPSQV---TQKYF 201 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE------------EEE-SSGGGC---CSCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC------------EEE-cCHHHh---CCCcc
Confidence 36788999999996 47888888775444899999 99999998775221 111 132222 36799
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|+-+-.- ..+..+.+.|+|||++++.
T Consensus 202 vv~d~~g~---------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 202 AIFDAVNS---------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEECC----------------TTGGGEEEEEEEEEE
T ss_pred EEEECCCc---------hhHHHHHHHhcCCCEEEEE
Confidence 99854331 1235678899999999887
No 347
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.00 E-value=0.33 Score=42.59 Aligned_cols=94 Identities=16% Similarity=0.064 Sum_probs=62.2
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------CCC
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PET 228 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~ 228 (284)
++.+||-+|+| .|..+..+++.... +|+++|.++.-++.+++.-.. ..+...-.++. ...
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGAD------------YVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCS------------EEECTTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC------------EEECCCCcCHHHHHHHHcCC
Confidence 78899999996 37777777765544 799999999999988764321 01111111110 112
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
..+|+|+.+-.. ...++.+.+.|+++|++++.-.
T Consensus 235 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 235 NGVDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp SCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEcc
Confidence 369999865431 1467788899999999988643
No 348
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.89 E-value=0.27 Score=42.66 Aligned_cols=93 Identities=13% Similarity=0.009 Sum_probs=62.3
Q ss_pred CCCCceEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+||-.| +|.|..+..++.....+|+++|.++..++.+++.-.. ..+ |..+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~------------~~~--~~~~~~~~~~~~~ 203 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW------------QVI--NYREEDLVERLKE 203 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS------------EEE--ETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC------------EEE--ECCCccHHHHHHH
Confidence 56788999999 4677777777765444799999999988888764211 111 211111
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.....+|+|+.+-. . ..++.+.+.|++||++++.-.
T Consensus 204 ~~~~~~~D~vi~~~g----~-----~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG----R-----DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC----G-----GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc----h-----HHHHHHHHHhcCCCEEEEEec
Confidence 11236999986643 1 356778889999999988643
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.87 E-value=0.17 Score=44.96 Aligned_cols=96 Identities=15% Similarity=-0.002 Sum_probs=63.5
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..+.. +. .++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT------------DFVNPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc------------eEEeccccchhHHHHHHH
Confidence 56788999999874 7778878776554 799999999999988754221 11111 10 0110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEec
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e~ 270 (284)
...+.+|+|+-+-.- ...+..+.+.|+|| |++++.-.
T Consensus 258 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 258 MTNGGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 011369999854321 14678889999999 99988643
No 350
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.71 E-value=0.24 Score=43.69 Aligned_cols=95 Identities=17% Similarity=0.038 Sum_probs=61.9
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||-.|+ |.|..+..++.....+|+++|.++..++.+++.-.. ..+..+-.++. .
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA------------AGFNYKKEDFSEATLKFT 227 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc------------EEEecCChHHHHHHHHHh
Confidence 567889999984 677777777766555799999999999988654211 01111111100 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+.+-.- ..+..+.+.|++||.+++.-.
T Consensus 228 ~~~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 228 KGAGVNLILDCIGG---------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp TTSCEEEEEESSCG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred cCCCceEEEECCCc---------hHHHHHHHhccCCCEEEEEec
Confidence 12369999865431 245667788999999988643
No 351
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.66 E-value=0.15 Score=44.65 Aligned_cols=59 Identities=8% Similarity=-0.009 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCC
Q 023288 139 EAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE 203 (284)
Q Consensus 139 ~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~ 203 (284)
..++..++... ..++..|||.-||+|..+.... ....+.+|+|+++...+.+++++...
T Consensus 239 ~~l~~~~i~~~-----~~~~~~VlDpF~GsGtt~~aa~-~~gr~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 239 AKLPEFFIRML-----TEPDDLVVDIFGGSNTTGLVAE-RESRKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp THHHHHHHHHH-----CCTTCEEEETTCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHH-HcCCCEEEEeCCHHHHHHHHHHHHhc
Confidence 34555555432 3477899999999999998665 44457999999999999999998764
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.65 E-value=0.19 Score=44.81 Aligned_cols=96 Identities=15% Similarity=0.029 Sum_probs=63.9
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC--CCCCC-----
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP--LQDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d--~~~~~----- 225 (284)
..++.+||-+|+| .|.++..+++.. ..+|+++|.++.-++.+++.-.. ..+... -.++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN------------EFVNPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc------------EEEccccCchhHHHHHHH
Confidence 5678899999997 477888777654 43799999999999988764221 111111 01110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEec
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKEN 270 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e~ 270 (284)
...+.+|+|+-+-. . ...+..+.+.|+|| |++++.-.
T Consensus 259 ~~~gg~D~vid~~g-----~---~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 259 LTDGGVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HTTSCBSEEEECSC-----C---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred hcCCCCCEEEECCC-----C---HHHHHHHHHHhhccCCEEEEEcc
Confidence 11247999985433 1 15788899999997 99988643
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.65 E-value=0.37 Score=42.62 Aligned_cols=93 Identities=13% Similarity=0.036 Sum_probs=62.6
Q ss_pred CCceEEEee-cc-ccHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEE---EcCCCCCCCCCCc
Q 023288 157 QHLVALDCG-SG-IGRITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFF---CVPLQDFTPETGR 230 (284)
Q Consensus 157 ~~~~VLDiG-cG-tG~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~---~~d~~~~~~~~~~ 230 (284)
++.+||=+| +| .|..+..+++. +..+|+++|.+++-++.+++.-... -++.. ...+.+ ...+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~---------vi~~~~~~~~~v~~--~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHH---------VIDHSKPLAAEVAA--LGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSE---------EECTTSCHHHHHHT--TCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCE---------EEeCCCCHHHHHHH--hcCCC
Confidence 677899998 44 68888888876 4668999999999999987642210 00000 000111 12357
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|+|+-+-. -...+..+.+.|+|||++++.
T Consensus 240 ~Dvvid~~g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC--------chhhHHHHHHHhcCCCEEEEE
Confidence 999986432 115778889999999999987
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.59 E-value=0.095 Score=46.12 Aligned_cols=94 Identities=12% Similarity=-0.006 Sum_probs=63.4
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCC---CCC----
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ---DFT---- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~---~~~---- 225 (284)
..++.+||-+|+ |.|..+..++.....+|+++|.++..++.+++.-.. .. .|.. ++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~------------~~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE------------VF--IDFTKEKDIVGAVL 232 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC------------EE--EETTTCSCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc------------eE--EecCccHhHHHHHH
Confidence 567889999998 578887777765545799999998888887753111 11 1222 110
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
...+.+|+|+.+... ...++.+.+.|++||++++.-.
T Consensus 233 ~~~~~~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS--------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHTSCEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECCC
T ss_pred HHhCCCCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 001269999865431 1477888999999999987643
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.58 E-value=0.23 Score=44.06 Aligned_cols=95 Identities=15% Similarity=-0.019 Sum_probs=63.0
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..+.. +. .++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT------------ECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc------------eEeccccccccHHHHHHH
Confidence 56788999999874 7777777765444 799999999999998865321 01111 10 0110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e 269 (284)
...+.+|+|+-+-.- ...++.+.+.|+|+ |++++.-
T Consensus 256 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 256 MTDGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HhCCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 112379999854321 14678889999999 9998864
No 356
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.56 E-value=0.65 Score=34.89 Aligned_cols=93 Identities=12% Similarity=-0.028 Sum_probs=56.9
Q ss_pred CceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCcee
Q 023288 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (284)
Q Consensus 158 ~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD 232 (284)
..+|+=+|||. |......+.....+|+++|.+++.++.+++. .+.++.+|..+.. ..-..+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-------------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-------------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-------------CCCEEECCCCCHHHHHhcCcccCC
Confidence 35788899874 4433333333333699999999999888752 1456777776532 1224688
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|++...- +.....+-...+.+.|+..++..
T Consensus 74 ~vi~~~~~-----~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 74 WLILTIPN-----GYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp EEEECCSC-----HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEEEECCC-----hHHHHHHHHHHHHHCCCCeEEEE
Confidence 88865431 12223344456677888877664
No 357
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.49 E-value=0.44 Score=42.26 Aligned_cols=95 Identities=13% Similarity=-0.061 Sum_probs=62.9
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (284)
..++.+||-+|+| .|..+..+++.... +|+++|.|+.-++.+++.-.. ..+.. +. .++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT------------DCLNPRELDKPVQDVITE 260 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------EEEccccccchHHHHHHH
Confidence 5678899999987 47778878776554 799999999999988764221 01111 10 0110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e 269 (284)
...+.+|+|+-+-.- ...+..+.+.|++| |++++.-
T Consensus 261 ~~~~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHTSCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEEC
Confidence 011369999854321 15678889999999 9998753
No 358
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.49 E-value=0.32 Score=43.10 Aligned_cols=95 Identities=13% Similarity=-0.056 Sum_probs=62.8
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++.-.. ..+.. +. .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT------------ECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc------------eEecccccchhHHHHHHH
Confidence 56788999999875 7777777776554 799999999999988754221 01111 10 0110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e 269 (284)
...+.+|+|+-+-.- ...+..+.+.|++| |++++.-
T Consensus 257 ~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HhCCCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 112379999854321 14678888999999 9998764
No 359
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.43 E-value=0.29 Score=43.37 Aligned_cols=95 Identities=13% Similarity=-0.109 Sum_probs=62.8
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CC-CCCC-----
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PL-QDFT----- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~-~~~~----- 225 (284)
..++.+||-+|+|. |..+..+++.... +|+++|.|+.-++.+++.-.. ..+.. +. .++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~------------~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT------------ECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS------------EEECGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc------------EEEecccccchHHHHHHH
Confidence 56788999999874 7777777765443 799999999999988764221 11111 10 1110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCC-cEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPG-GFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpG-G~lii~e 269 (284)
...+.+|+|+-.-.- ...+..+.+.|+|| |++++.-
T Consensus 257 ~t~gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 257 KTNGGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HhCCCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 112479999854321 14678889999999 9998764
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.42 E-value=0.26 Score=43.65 Aligned_cols=94 Identities=12% Similarity=-0.008 Sum_probs=63.7
Q ss_pred CCCCceEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
..++.+||-+| .|.|..+..+++....+|++++.+++.++.+++.-.. ..+..+-.++. ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD------------RPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc------------EEEecCChhHHHHHHHhc
Confidence 56788999999 5678888888876555799999999999888763211 11111111110 01
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...+|+|+.+-. . ..++.+.+.|+++|++++.-
T Consensus 229 ~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 PEGVDVVYESVG-------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TTCEEEEEECSC-------T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC-------H--HHHHHHHHHHhcCCEEEEEe
Confidence 246999986543 1 46778889999999998864
No 361
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.15 E-value=0.043 Score=47.41 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=40.0
Q ss_pred ceeEEEcCCCCC-C-CCCCceeEEEecchhccCCh--------------h----hHHHHHHHHHhcCCCCcEEEEE
Q 023288 213 ATNFFCVPLQDF-T-PETGRYDVIWVQWCIGHLTD--------------D----DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 213 ~~~~~~~d~~~~-~-~~~~~fD~Iv~~~~l~~~~~--------------~----~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.++++++|..+. . +++++||+|+++-......+ + .+..+++++.++|||||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 467889988763 2 45679999999866532210 1 1356788999999999999875
No 362
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.07 E-value=0.29 Score=43.03 Aligned_cols=93 Identities=8% Similarity=-0.054 Sum_probs=62.5
Q ss_pred CCCC--ceEEEeec--cccHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 155 NNQH--LVALDCGS--GIGRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 155 ~~~~--~~VLDiGc--GtG~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
..++ .+||-.|+ |.|..+..++..... +|+++|.++.-++.+++.+... .. .|..+..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-----------~~--~d~~~~~~~~~ 222 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-----------AA--INYKKDNVAEQ 222 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-----------EE--EETTTSCHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-----------eE--EecCchHHHHH
Confidence 4567 89999997 567777777765555 7999999998888887644210 11 1221111
Q ss_pred ---CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 ---PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ---~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...+.+|+|+.+-. . ..++.+.+.|++||++++.-
T Consensus 223 ~~~~~~~~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVG-------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHCTTCEEEEEESCC-------H--HHHHHHHHTEEEEEEEEECC
T ss_pred HHHhcCCCCCEEEECCC-------H--HHHHHHHHHhccCcEEEEEC
Confidence 01126999986544 1 46788889999999998863
No 363
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.03 E-value=0.31 Score=42.43 Aligned_cols=93 Identities=13% Similarity=0.041 Sum_probs=62.8
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------- 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 225 (284)
..++.+||-.|+ |.|..+..++.....+|+++|.+++.++.+++.-.. ..+ |..+..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~------------~~~--d~~~~~~~~~i~~ 208 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH------------HTI--NYSTQDFAEVVRE 208 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEE--ETTTSCHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEE--ECCCHHHHHHHHH
Confidence 567889999995 678887777766555799999999888888764211 011 221111
Q ss_pred -CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 -PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.....+|+|+.+-. . ..++.+.+.|+|||++++.-.
T Consensus 209 ~~~~~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ITGGKGVDVVYDSIG-------K--DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHTTCCEEEEEECSC-------T--TTHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCeEEEECCc-------H--HHHHHHHHhhccCCEEEEEec
Confidence 11236999986543 1 356778889999999988643
No 364
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.87 E-value=0.22 Score=50.16 Aligned_cols=104 Identities=17% Similarity=0.104 Sum_probs=68.3
Q ss_pred CCCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCC------------C
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPL------------Q 222 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~------------~ 222 (284)
....+++|+=||.|.++..+...++ ..+.++|+++..++.-+.++.. ..++..|+ .
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~-----------~~~~~~DI~~l~~~~~~~di~ 606 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG-----------STVFTEDCNILLKLVMAGETT 606 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT-----------SEEECSCHHHHHHHHHHTCSB
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC-----------CccccccHHHHhhhccchhhh
Confidence 4567999999999999999988887 5688999999999998888754 22333332 2
Q ss_pred CCC---C-CCCceeEEEecchhccCChh---------h----HHHHHHHHHhcCCCCcEEEEEeccC
Q 023288 223 DFT---P-ETGRYDVIWVQWCIGHLTDD---------D----FVSFFKRAKVGLKPGGFFVLKENIA 272 (284)
Q Consensus 223 ~~~---~-~~~~fD~Iv~~~~l~~~~~~---------~----~~~~l~~~~r~LkpGG~lii~e~~~ 272 (284)
+.. + ..+.+|+|+.......++.. + +-..+-++.+.++| .+++.||+.
T Consensus 607 ~~~~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rP--k~~llENV~ 671 (1002)
T 3swr_A 607 NSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRP--RFFLLENVR 671 (1002)
T ss_dssp CTTCCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCC--SEEEEEEEG
T ss_pred hhhhhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCC--CEEEEeccH
Confidence 111 1 23579999966543333211 1 11223345556677 477789975
No 365
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.82 E-value=0.21 Score=44.09 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=63.7
Q ss_pred cCCCCceEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 154 RNNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 154 ~~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
...++.+||-+| .|.|..+..+++....+|+++|.++.-++.+++.-.. ..+...-.++. .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK------------RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC------------EEEeCCchHHHHHHHHH
Confidence 356788999995 3468888888876555799999999999998875321 11111111110 0
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
..+.+|+|+.+-.- ..+..+.+.|+|||.+++.-.
T Consensus 232 ~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 232 TGQGVDIILDMIGA---------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HSSCEEEEEESCCG---------GGHHHHHHTEEEEEEEEECCC
T ss_pred hCCCceEEEECCCH---------HHHHHHHHHhccCCEEEEEEe
Confidence 02469999865431 256677889999999988643
No 366
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.81 E-value=0.46 Score=43.42 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=64.4
Q ss_pred cCCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------
Q 023288 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (284)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 225 (284)
...++.+||=+|+ |.|.++..+++....++++++.++.-++.+++.-.. .++...-.++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~d~~~~~~~~ 292 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE------------AIIDRNAEGYRFWKDEN 292 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC------------EEEETTTTTCCSEEETT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc------------EEEecCcCccccccccc
Confidence 3567889999997 478888888876666799999999999999775322 01111111100
Q ss_pred -----------------CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 -----------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -----------------~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-. . ..+..+.+.|+|||.+++.-
T Consensus 293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp EECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------H--HHHHHHHHHEEEEEEEEESC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------c--hhHHHHHHHhhCCcEEEEEe
Confidence 01247999985433 2 46778888999999998863
No 367
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.75 E-value=0.11 Score=45.51 Aligned_cols=90 Identities=17% Similarity=0.076 Sum_probs=60.0
Q ss_pred CCceEEEeeccc-cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------CC
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~ 227 (284)
++.+||-+|+|. |..+..+++.... +|+++|.++.-++.+++. .. .. .|..+.. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~------------~v--~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD------------RL--VNPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS------------EE--ECTTTSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH------------hc--cCcCccCHHHHHHHhc
Confidence 788999999863 7777777776554 799999999888777654 21 01 1111100 00
Q ss_pred CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...+|+|+.+-.- ...++.+.+.|+|+|++++.-
T Consensus 229 ~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 2369999855431 146778889999999988763
No 368
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.69 E-value=0.24 Score=43.22 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=45.8
Q ss_pred ccHHHHHHHHHhhcCCccCCCCceEEEeeccccHHHHHHHHhCCCcEEEEeCCH---HHHHHHHHHcCCC
Q 023288 137 GSEAFLQMLLSDRFPNARNNQHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPE 203 (284)
Q Consensus 137 ~~~~~l~~~~~~~l~~~~~~~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~---~~l~~ar~~~~~~ 203 (284)
-+..++..++... ..++..|||.=||+|..+......+ .+.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 3455666655433 3477899999999999999766554 4699999999 9999999998653
No 369
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.12 Score=44.90 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=60.1
Q ss_pred CCCCc-eEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCc
Q 023288 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGR 230 (284)
Q Consensus 155 ~~~~~-~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 230 (284)
..++. +||-+|+ |.|..+..+++....+|++++.++.-++.+++.-.. .-++....+.... ....+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~ 216 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK---------EVLAREDVMAERIRPLDKQR 216 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS---------EEEECC---------CCSCC
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc---------EEEecCCcHHHHHHHhcCCc
Confidence 34554 7999997 678888888876555799999998888888763211 0111111110000 112246
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|+|+-+-. . ..+..+.+.|++||++++.-
T Consensus 217 ~d~vid~~g-------~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 217 WAAAVDPVG-------G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEEECST-------T--TTHHHHHHTEEEEEEEEECS
T ss_pred ccEEEECCc-------H--HHHHHHHHhhccCCEEEEEe
Confidence 999985533 1 24667788999999998863
No 370
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.33 E-value=0.2 Score=49.18 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=39.4
Q ss_pred CCCCceEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHcCC
Q 023288 155 NNQHLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~ar~~~~~ 202 (284)
..+..+|+|+=||.|.++.-+-..+ +.-+.++|+++.+++--+.++..
T Consensus 209 ~~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~ 262 (784)
T 4ft4_B 209 PTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ 262 (784)
T ss_dssp -CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC
Confidence 3456799999999999998887655 55689999999999999888643
No 371
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.22 E-value=0.062 Score=47.63 Aligned_cols=96 Identities=20% Similarity=0.096 Sum_probs=61.1
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCC-CC--CCCCCc
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQ-DF--TPETGR 230 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~~ 230 (284)
..++.+||-+|+| .|..+..+++....+|+++|.|+.-++.+++.-.. .++...-. ++ ... +.
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD------------HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS------------EEEEGGGTSCHHHHSC-SC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCC------------EEEcCcCchHHHHHhh-cC
Confidence 5678899999986 47777777765444699999999999988874221 11111101 11 011 47
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|+|+.+-.-. + + ..++.+.+.|+|||++++.-
T Consensus 244 ~D~vid~~g~~--~-~---~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL--T-D---IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS--T-T---CCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC--c-H---HHHHHHHHHhcCCCEEEEec
Confidence 99998654320 0 0 23455678899999998763
No 372
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.08 E-value=0.16 Score=44.27 Aligned_cols=97 Identities=12% Similarity=0.004 Sum_probs=61.2
Q ss_pred CCCCc-eEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-CCCCCc
Q 023288 155 NNQHL-VALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-TPETGR 230 (284)
Q Consensus 155 ~~~~~-~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 230 (284)
..++. +||-+|| |.|..+..+++....+|++++.+++-++.+++.-.. .-++....+.... ....+.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS---------EVISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS---------EEEEHHHHCSSCCCSSCCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---------EEEECCCchHHHHHHhhcCC
Confidence 34554 8999997 577777777765444699999998888888764221 1111111111111 112346
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+|+|+-+-. . ..+..+.+.|+|||++++.-
T Consensus 218 ~d~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 218 WQGAVDPVG-------G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEEESCC-------T--HHHHHHHTTEEEEEEEEECC
T ss_pred ccEEEECCc-------H--HHHHHHHHhhcCCCEEEEEe
Confidence 999885543 2 35778889999999998863
No 373
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.05 E-value=0.25 Score=44.01 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=63.2
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC------CCC-CC
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP------LQD-FT 225 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d------~~~-~~ 225 (284)
..++.+||-+|+| .|..+..+++... .+|++++.|++-++.+++.-.. .++... +.+ +.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD------------LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc------------EEEeccccCcchHHHHHH
Confidence 4577899999976 4777887887665 4899999999999998854211 111111 000 00
Q ss_pred --CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 226 --PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 226 --~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.....+|+|+-+-.- . ..+..+.+.|+|||++++.-.
T Consensus 261 ~~~~g~g~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 261 DITHGRGADFILEATGD------S--RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHTTTSCEEEEEECSSC------T--THHHHHHHHEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCCC------H--HHHHHHHHHHhcCCEEEEEec
Confidence 112369999854331 1 367778889999999988643
No 374
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.89 E-value=0.038 Score=47.70 Aligned_cols=93 Identities=13% Similarity=-0.046 Sum_probs=60.3
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCCCCCCCCCCce
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~f 231 (284)
..++.+||-+|+ |.|..+..+++....+|++++.++..++.+++.-.. ..++... .++.+. . +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---------~~~~~~~~~~~~~~-~--~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE---------EAATYAEVPERAKA-W--GGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS---------EEEEGGGHHHHHHH-T--TSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC---------EEEECCcchhHHHH-h--cCc
Confidence 457789999997 578888878776555899999999888888653211 0010000 111000 1 469
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|+. -. . ..++.+.+.|+|+|++++.-
T Consensus 191 d~vid-~g-------~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VR-------G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CS-------C--TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CC-------H--HHHHHHHHhhccCCEEEEEe
Confidence 99986 32 1 25677888999999988753
No 375
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.77 E-value=0.32 Score=42.87 Aligned_cols=89 Identities=20% Similarity=0.127 Sum_probs=58.0
Q ss_pred ceEEEeecc-ccHHH-HHHH-HhCCCc-EEEEeCCHH---HHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC----
Q 023288 159 LVALDCGSG-IGRIT-KNLL-IRYFNE-VDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE---- 227 (284)
Q Consensus 159 ~~VLDiGcG-tG~~s-~~l~-~~~~~~-v~gvD~S~~---~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---- 227 (284)
.+||-+|+| .|.++ ..++ +....+ |+++|.+++ -++.+++.-. +.. |..+-.+.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa-------------~~v--~~~~~~~~~i~~ 238 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA-------------TYV--DSRQTPVEDVPD 238 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC-------------EEE--ETTTSCGGGHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC-------------ccc--CCCccCHHHHHH
Confidence 899999985 46777 7777 544444 999999988 8888875321 111 21110000
Q ss_pred -CCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 228 -TGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 -~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.+.||+|+-+-.- . ..++.+.+.|+|||++++.-.
T Consensus 239 ~~gg~Dvvid~~g~------~--~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGF------P--KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCC------H--HHHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCC------h--HHHHHHHHHHhcCCEEEEEeC
Confidence 1379999854321 1 467888899999999988643
No 376
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.63 E-value=1.4 Score=38.61 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=74.2
Q ss_pred CCceEEEeeccccHHHHHHHHhCC--CcEEEEeCCHHHHHHHHHHcCCC--------------CCC--C-CCCCcceeEE
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF--NEVDLLEPVSHFLDAARESLAPE--------------NHM--A-PDMHKATNFF 217 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~--~~v~gvD~S~~~l~~ar~~~~~~--------------~~~--~-~~~~~~~~~~ 217 (284)
+...|+-+|||-=.....+..... ..++=||. |..++.=++.+... ... . .....+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 356899999998777777765432 25777776 44444322222210 000 0 0012456788
Q ss_pred EcCCCCCC----------CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCCC
Q 023288 218 CVPLQDFT----------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIARS 274 (284)
Q Consensus 218 ~~d~~~~~----------~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~~ 274 (284)
.+|+.+.. +....-=++++-.++.|++.++...+++.+.+.. |+|.+++.|.+.++
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG 234 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC
Confidence 88987631 2334556888889999999999999999999876 56777777876443
No 377
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.54 E-value=0.51 Score=42.95 Aligned_cols=98 Identities=14% Similarity=0.036 Sum_probs=64.2
Q ss_pred cCCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------
Q 023288 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (284)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 225 (284)
...++.+||=.|+ |.|..+..+++....++++++.++.-++.+++.-.. ..++....+..+..
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~---------~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD---------LVINRAELGITDDIADDPRR 287 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---------CEEEHHHHTCCTTGGGCHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC---------EEEecccccccccccccccc
Confidence 3667889999997 467888888876666799999999999988764221 11111111221100
Q ss_pred --------------CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 --------------PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 --------------~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-. . ..++.+.+.|++||.+++.-
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTG-------R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSC-------H--HHHHHHHHHSCTTCEEEESC
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCC-------c--hHHHHHHHHHhcCCEEEEEe
Confidence 00246899986443 1 35677888999999999864
No 378
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.26 E-value=1.6 Score=34.15 Aligned_cols=92 Identities=15% Similarity=-0.025 Sum_probs=53.8
Q ss_pred CceEEEeeccc-cHHH-HHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----C-CCC
Q 023288 158 HLVALDCGSGI-GRIT-KNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----P-ETG 229 (284)
Q Consensus 158 ~~~VLDiGcGt-G~~s-~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~-~~~ 229 (284)
+.+|+=+|||. |... ..|.+. +. +|+++|.++..++.+++.- +..+.+|..+.. . .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g-------------~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEG-------------RNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTT-------------CCEEECCTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCC-------------CCEEEcCCCCHHHHHhccCCC
Confidence 45899899873 4333 333334 55 5999999998888776431 334555554321 1 124
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+|+|+.... +......+-...+.+.|++.++..
T Consensus 105 ~ad~vi~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 105 HVKLVLLAMP-----HHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CCCEEEECCS-----SHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCEEEEeCC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6898886432 112223334456667788877765
No 379
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.21 E-value=0.19 Score=48.36 Aligned_cols=111 Identities=14% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCceEEEeeccccHHHHHHHHhC-----------CC--cEEEEeC---CHHHHHHHHHHcCC-----------CCCCCC-
Q 023288 157 QHLVALDCGSGIGRITKNLLIRY-----------FN--EVDLLEP---VSHFLDAARESLAP-----------ENHMAP- 208 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~-----------~~--~v~gvD~---S~~~l~~ar~~~~~-----------~~~~~~- 208 (284)
+..+|||+|-|+|......+... .. +++++|. +++.+..+-..... ......
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 45799999999999877665431 11 5899998 88777744332110 000000
Q ss_pred -------CCCcceeEEEcCCCCCC--CC---CCceeEEEecchhccCChh-hHHHHHHHHHhcCCCCcEEEE
Q 023288 209 -------DMHKATNFFCVPLQDFT--PE---TGRYDVIWVQWCIGHLTDD-DFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 209 -------~~~~~~~~~~~d~~~~~--~~---~~~fD~Iv~~~~l~~~~~~-~~~~~l~~~~r~LkpGG~lii 267 (284)
.....+++..+|+.+.- .. ...||+|+.-..--...++ --..+++.++++++|||.+.-
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 00123455566654421 11 3679999975422111111 134789999999999998764
No 380
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.18 E-value=1.6 Score=37.89 Aligned_cols=96 Identities=15% Similarity=0.035 Sum_probs=61.3
Q ss_pred CCCCceEEEeeccc-cHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 155 NNQHLVALDCGSGI-GRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 155 ~~~~~~VLDiGcGt-G~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
..++.+||=.|+|. |.++..+++.. ...++++|.++.-++.+++.-.. ..+...-.+.. .
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~------------~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM------------QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS------------EEEETTTSCHHHHHHHHG
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe------------EEEeCCCCCHHHHHHhhc
Confidence 56788999999874 55666666554 44678999999999999875322 11111111100 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
....+|+|+..-.. . ..++.+.++|+|||.+++.-.
T Consensus 226 ~~~g~d~v~d~~G~------~--~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 226 ELRFNQLILETAGV------P--QTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp GGCSSEEEEECSCS------H--HHHHHHHHHCCTTCEEEECCC
T ss_pred ccCCcccccccccc------c--chhhhhhheecCCeEEEEEec
Confidence 12357887754321 1 567888899999999998644
No 381
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.04 E-value=0.18 Score=48.70 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=65.4
Q ss_pred CCCceEEEeeccccHHHHHHHHhC----------C---CcEEEEeC---CHHHHHHHHHH-----------cCCCCCC--
Q 023288 156 NQHLVALDCGSGIGRITKNLLIRY----------F---NEVDLLEP---VSHFLDAARES-----------LAPENHM-- 206 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~~s~~l~~~~----------~---~~v~gvD~---S~~~l~~ar~~-----------~~~~~~~-- 206 (284)
.+..+|+|+|.|+|......++.. . -+++.+|. +...+..+-.. .......
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 356799999999999887665531 1 16899998 55555543221 1111000
Q ss_pred C------CCCCcceeEEEcCCCCCC--CC---CCceeEEEecchh-ccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 207 A------PDMHKATNFFCVPLQDFT--PE---TGRYDVIWVQWCI-GHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 207 ~------~~~~~~~~~~~~d~~~~~--~~---~~~fD~Iv~~~~l-~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+ ..-...+++..+|+.+.- .. .+.||.++.-..- ...++---..+++.+.++++|||.+.-
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 000235667777775431 11 3689999975421 111211124799999999999998764
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.90 E-value=0.61 Score=40.82 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=62.7
Q ss_pred cCCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------
Q 023288 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (284)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 225 (284)
...++.+||-+|+ |.|..+..+++....+|+++ .++.-++.+++.-.. .+. +-.++.
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~-------------~i~-~~~~~~~~~~~~ 211 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT-------------PID-ASREPEDYAAEH 211 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE-------------EEE-TTSCHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC-------------Eec-cCCCHHHHHHHH
Confidence 3667889999994 46888888887655579999 899989888765221 111 111111
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+-. . ..+..+.+.|+|+|.+++.-
T Consensus 212 ~~~~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 212 TAGQGFDLVYDTLG-------G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HTTSCEEEEEESSC-------T--HHHHHHHHHEEEEEEEEESC
T ss_pred hcCCCceEEEECCC-------c--HHHHHHHHHHhcCCeEEEEc
Confidence 11246999986433 1 46777888999999998753
No 383
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.73 E-value=0.4 Score=41.90 Aligned_cols=98 Identities=17% Similarity=0.000 Sum_probs=60.9
Q ss_pred CCCCceEEEeecccc-HHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CC--CCCC
Q 023288 155 NNQHLVALDCGSGIG-RITKNLLIR-YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FT--PETG 229 (284)
Q Consensus 155 ~~~~~~VLDiGcGtG-~~s~~l~~~-~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~--~~~~ 229 (284)
..++.+||=+|+|.+ .++..+++. +..+|+++|.+++-++.+++.... ..+++...|..+ .. ....
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~---------~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD---------VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS---------EEEEC-CCCHHHHHHHHTTSS
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe---------EEEeCCCCCHHHHhhhhcCCC
Confidence 567889999999864 444445543 456899999999988888876433 112221112110 00 1123
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.+|.++....- . ..+....+.|+++|.+++.-
T Consensus 232 g~d~~~~~~~~------~--~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAVA------R--IAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCSC------H--HHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEeccC------c--chhheeheeecCCceEEEEe
Confidence 56766654321 2 57788889999999988863
No 384
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.69 E-value=0.84 Score=39.42 Aligned_cols=92 Identities=15% Similarity=-0.014 Sum_probs=58.9
Q ss_pred CCCCceEEEee-c-cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CCCCCCce
Q 023288 155 NNQHLVALDCG-S-GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRY 231 (284)
Q Consensus 155 ~~~~~~VLDiG-c-GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~f 231 (284)
..++.+||=+| + |.|..+..+++....+|++++ ++.-++.+++.-.. ..+...-.+ +...-..+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~------------~~i~~~~~~~~~~~~~g~ 216 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE------------QCINYHEEDFLLAISTPV 216 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS------------EEEETTTSCHHHHCCSCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC------------EEEeCCCcchhhhhccCC
Confidence 56788999997 4 468888888876656799887 55557877764321 111111111 11011469
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|+|+-+-. . ..+..+.+.|+|||+++..
T Consensus 217 D~v~d~~g-------~--~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVG-------G--DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSC-------H--HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCC-------c--HHHHHHHHhccCCCEEEEe
Confidence 99985433 1 2337788999999999875
No 385
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.53 E-value=0.67 Score=40.92 Aligned_cols=88 Identities=22% Similarity=0.153 Sum_probs=57.8
Q ss_pred CceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCH---HHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC------
Q 023288 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE------ 227 (284)
Q Consensus 158 ~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~---~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------ 227 (284)
+.+||-+|+| .|..+..+++....+|+++|.++ +-++.+++.-. +.. | .+ .+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga-------------~~v--~-~~-~~~~~~~~~ 243 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT-------------NYY--N-SS-NGYDKLKDS 243 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC-------------EEE--E-CT-TCSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC-------------cee--c-hH-HHHHHHHHh
Confidence 7899999985 35666666654333799999998 77787775421 112 2 22 111
Q ss_pred CCceeEEEecchhccCChhhHHHHH-HHHHhcCCCCcEEEEEec
Q 023288 228 TGRYDVIWVQWCIGHLTDDDFVSFF-KRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 ~~~fD~Iv~~~~l~~~~~~~~~~~l-~~~~r~LkpGG~lii~e~ 270 (284)
.+.+|+|+.+-.. . ..+ +.+.+.|+|||.+++.-.
T Consensus 244 ~~~~d~vid~~g~-----~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 244 VGKFDVIIDATGA-----D---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp HCCEEEEEECCCC-----C---THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCCEEEECCCC-----h---HHHHHHHHHHHhcCCEEEEEec
Confidence 1469999865431 1 245 788899999999988643
No 386
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.41 E-value=0.83 Score=39.96 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=60.5
Q ss_pred CCceEEEee-cc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CCCC
Q 023288 157 QHLVALDCG-SG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PETG 229 (284)
Q Consensus 157 ~~~~VLDiG-cG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 229 (284)
++.+||=+| +| .|..+..+++....+|++++.++.-++.+++.-.. ..+..+ .++. ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~-~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGAD------------IVLNHK-ESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCS------------EEECTT-SCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc------------EEEECC-ccHHHHHHHhCCC
Confidence 678999984 44 67778877776555899999999999999875322 011110 0110 1124
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+|+|+-+.. -...+..+.+.|+|||.++..
T Consensus 217 g~Dvv~d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 217 LVDYVFCTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CEEEEEESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred CccEEEECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 6999986432 125678888999999999764
No 387
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.32 E-value=1.3 Score=39.96 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=60.1
Q ss_pred CceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCcee
Q 023288 158 HLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (284)
Q Consensus 158 ~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD 232 (284)
..+|+=+|||. |......+......|+++|.++..++.+++.- +.++.+|.++.. ..-...|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g-------------~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFG-------------MKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTT-------------CCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCC-------------CeEEEcCCCCHHHHHhcCCCccC
Confidence 45788888863 33333333333335999999999999887531 346778877642 2234688
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|++... +++....+....+.+.|...++..
T Consensus 71 ~viv~~~-----~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 71 VLINAID-----DPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EEEECCS-----SHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEECCC-----ChHHHHHHHHHHHHhCCCCeEEEE
Confidence 8876543 234445666777788898877775
No 388
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.31 E-value=3.7 Score=29.93 Aligned_cols=90 Identities=8% Similarity=-0.009 Sum_probs=50.6
Q ss_pred CceEEEeeccccHHHHHHH---HhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCc
Q 023288 158 HLVALDCGSGIGRITKNLL---IRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~---~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 230 (284)
+++|+=+||| ..+..++ .....+|+++|.++..++..++... +.++.+|..+.. ..-..
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~------------~~~~~~d~~~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID------------ALVINGDCTKIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS------------SEEEESCTTSHHHHHHTTTTT
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC------------cEEEEcCCCCHHHHHHcCccc
Confidence 3578888885 3333332 2333469999999988776654321 334555554321 11236
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+|+|+..-. .......+..+.+.+.++ .+++
T Consensus 70 ~d~vi~~~~-----~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 70 ADMYIAVTG-----KEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CSEEEECCS-----CHHHHHHHHHHHHHTTCC-CEEE
T ss_pred CCEEEEeeC-----CchHHHHHHHHHHHcCCC-EEEE
Confidence 899887632 123334555666678876 4444
No 389
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.02 E-value=0.5 Score=42.95 Aligned_cols=44 Identities=20% Similarity=0.438 Sum_probs=35.4
Q ss_pred CceEEEeeccccHHHHHHHHhC------CCcEEEEeCCHHHHHHHHHHcC
Q 023288 158 HLVALDCGSGIGRITKNLLIRY------FNEVDLLEPVSHFLDAARESLA 201 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~------~~~v~gvD~S~~~l~~ar~~~~ 201 (284)
+.+|+|+|.|+|.++..+++.. ..+++.||+|+.+.+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 4789999999999988887521 2279999999998887777654
No 390
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.88 E-value=2.2 Score=36.91 Aligned_cols=88 Identities=14% Similarity=0.018 Sum_probs=56.8
Q ss_pred ceEEEeeccc--cHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCC-CCCCCCceeEE
Q 023288 159 LVALDCGSGI--GRITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQD-FTPETGRYDVI 234 (284)
Q Consensus 159 ~~VLDiGcGt--G~~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~I 234 (284)
.+|.=||+|. |.++..+.+.+.. +|+++|.++..++.+++.-. +.-...+..+ . -...|+|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~------------~~~~~~~~~~~~---~~~aDvV 98 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------------IDEGTTSIAKVE---DFSPDFV 98 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------------CSEEESCTTGGG---GGCCSEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC------------cchhcCCHHHHh---hccCCEE
Confidence 5799999883 3445555555653 69999999998888765311 1112233332 1 1357998
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
+.+-. ......+++++...++||..++
T Consensus 99 ilavp-----~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 99 MLSSP-----VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp EECSC-----GGGHHHHHHHHHHHSCTTCEEE
T ss_pred EEeCC-----HHHHHHHHHHHhhccCCCcEEE
Confidence 87643 3355678899999999987543
No 391
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.53 E-value=2.9 Score=30.98 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=51.8
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCcee
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRYD 232 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD 232 (284)
.+|+=+|||. |. ++..|.+.+. +|+++|.+++.++.+++. ...++.+|..+.. ..-..+|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------------CCcEEECCCCCHHHHHhCCcccCC
Confidence 5788899863 32 2233333444 599999999988877653 1456777776532 1224689
Q ss_pred EEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 233 VIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 233 ~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|+.... +.+....+....+.+. ...++..
T Consensus 73 ~vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia~ 102 (141)
T 3llv_A 73 AVLITGS-----DDEFNLKILKALRSVS-DVYAIVR 102 (141)
T ss_dssp EEEECCS-----CHHHHHHHHHHHHHHC-CCCEEEE
T ss_pred EEEEecC-----CHHHHHHHHHHHHHhC-CceEEEE
Confidence 8886543 1222233444445555 4555443
No 392
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.02 E-value=0.18 Score=44.03 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=40.8
Q ss_pred cceeEEEcCCCC-CC-CCCCceeEEEecchhccCCh------------hhHHHHHHHHHhcCCCCcEEEEE
Q 023288 212 KATNFFCVPLQD-FT-PETGRYDVIWVQWCIGHLTD------------DDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 212 ~~~~~~~~d~~~-~~-~~~~~fD~Iv~~~~l~~~~~------------~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
....++++|..+ +. +++++||+|++......... ..+...+.++.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 346788888654 22 45679999998865432210 13668899999999999999885
No 393
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=88.97 E-value=0.18 Score=44.83 Aligned_cols=94 Identities=13% Similarity=0.058 Sum_probs=57.8
Q ss_pred CCCCceEEEee--ccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---CCCC
Q 023288 155 NNQHLVALDCG--SGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---PETG 229 (284)
Q Consensus 155 ~~~~~~VLDiG--cGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~ 229 (284)
..++.+||=+| .|.|..+..+++....+|++++ ++.-++.+++.-.. ..+...-.++. ....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~v~~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGAD------------DVIDYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCC------------EEEECCchHHHHHHhhcC
Confidence 45778999999 3478888888776555799998 77777777543211 11111101110 0114
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+|+|+-+-.- +. ..+....+.|++||++++.
T Consensus 248 g~D~vid~~g~-----~~--~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGG-----ST--ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCT-----TH--HHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEECCCC-----hh--hhhHHHHHhhcCCcEEEEe
Confidence 69999854331 11 3456777899999999875
No 394
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.70 E-value=0.28 Score=43.46 Aligned_cols=94 Identities=14% Similarity=0.119 Sum_probs=58.0
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCCceeEE
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~I 234 (284)
++.+||-+|+| .|..+..+++....+|++++.++.-++.+++.+... .++.. +...+.-..+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~-----------~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-----------SFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS-----------EEEETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc-----------eEEeccCHHHHHHhhCCCCEE
Confidence 67899999986 366777777655557999999998888877544321 11111 100000001369999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+.+-... ..++.+.+.|++||.++..-
T Consensus 256 id~~g~~--------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSAV--------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSSC--------CCSHHHHHHEEEEEEEEECC
T ss_pred EECCCcH--------HHHHHHHHHHhcCCEEEEEc
Confidence 8654321 12445667889999988764
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.57 E-value=0.16 Score=44.83 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=58.9
Q ss_pred CC-CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCCce
Q 023288 155 NN-QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRY 231 (284)
Q Consensus 155 ~~-~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~f 231 (284)
.. ++.+||-+|+| .|..+..+++....+|+++|.++.-++.+++.+... . ++.. +...+.-..+.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~--------~---vi~~~~~~~~~~~~~g~ 245 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD--------D---YVIGSDQAKMSELADSL 245 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCS--------C---EEETTCHHHHHHSTTTE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCc--------e---eeccccHHHHHHhcCCC
Confidence 44 77899999986 466677777654447999999998888887444321 0 1111 100000001369
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
|+|+-+-.-. ..+..+.+.|+|||++++.-
T Consensus 246 D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVH--------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSC--------CCSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCCh--------HHHHHHHHHhccCCEEEEeC
Confidence 9998543311 23455678999999998864
No 396
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=88.39 E-value=1.3 Score=45.84 Aligned_cols=46 Identities=20% Similarity=0.099 Sum_probs=39.7
Q ss_pred CCceEEEeeccccHHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF-NEVDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~ 202 (284)
...+++|+=||.|.++..+...++ ..+.++|+++..++.-+.++..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~ 896 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG 896 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC
Confidence 457899999999999999887786 4689999999999998888643
No 397
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.56 E-value=1.9 Score=35.86 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=64.0
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-------
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 226 (284)
.+.++|=.|++.|. ++..|++.+. +|+++|.++..++...+.. ..++.++.+|+.+...
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~ 75 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLGAA 75 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHHHH
Confidence 45678878876553 3444554555 5999999998887776654 2357888899887420
Q ss_pred ---CCCceeEEEecchhc------cCChhhHHH-----------HHHHHHhcCCCCcEEEEE
Q 023288 227 ---ETGRYDVIWVQWCIG------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 227 ---~~~~fD~Iv~~~~l~------~~~~~~~~~-----------~l~~~~r~LkpGG~lii~ 268 (284)
.-+..|+++.+-... .++.+++.. +.+.+...++++|.+++.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 76 AGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp HHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 014789998664332 234444332 345566667778888775
No 398
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=86.83 E-value=2.2 Score=37.64 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=60.1
Q ss_pred CCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CCC
Q 023288 156 NQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PET 228 (284)
Q Consensus 156 ~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~ 228 (284)
.++.+||=+|+ |.|..+..+++....+|+++. |+.-++.+++.-.. .++...-.++. ..+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~------------~vi~~~~~~~~~~v~~~t~ 229 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAE------------EVFDYRAPNLAQTIRTYTK 229 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS------------EEEETTSTTHHHHHHHHTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCc------------EEEECCCchHHHHHHHHcc
Confidence 57789999998 378888888876655788885 88888888764221 11211111110 112
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcC-CCCcEEEEEe
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGL-KPGGFFVLKE 269 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~L-kpGG~lii~e 269 (284)
+.+|+|+-+-.- . ..+..+.+.| ++||++++.-
T Consensus 230 g~~d~v~d~~g~------~--~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 230 NNLRYALDCITN------V--ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TCCCEEEESSCS------H--HHHHHHHHHSCTTCEEEEESS
T ss_pred CCccEEEECCCc------h--HHHHHHHHHhhcCCCEEEEEe
Confidence 459999854331 1 4667777888 6999998763
No 399
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.81 E-value=4.3 Score=30.57 Aligned_cols=92 Identities=14% Similarity=0.112 Sum_probs=54.7
Q ss_pred ceEEEeeccccHHHHHHHH----hCCCcEEEEeCC-HHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCC
Q 023288 159 LVALDCGSGIGRITKNLLI----RYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETG 229 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~----~~~~~v~gvD~S-~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 229 (284)
.+|+=+|| |..+..+++ .+. +|+++|.+ +...+..++.... .+.++.+|..+.. ..-.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~----------~~~~i~gd~~~~~~l~~a~i~ 70 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGD----------NADVIPGDSNDSSVLKKAGID 70 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCT----------TCEEEESCTTSHHHHHHHTTT
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcC----------CCeEEEcCCCCHHHHHHcChh
Confidence 46777876 555544433 344 59999997 4555444443321 2567788876532 1124
Q ss_pred ceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 230 RYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 230 ~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
..|+|++... +++....+....+.+.|...++..
T Consensus 71 ~ad~vi~~~~-----~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 71 RCRAILALSD-----NDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp TCSEEEECSS-----CHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hCCEEEEecC-----ChHHHHHHHHHHHHHCCCCEEEEE
Confidence 6888887543 223345666677777777777664
No 400
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.81 E-value=0.35 Score=43.17 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=55.0
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
++.+|+=+|+| .|......+.....+|+++|.++.-++.+++.+... +.....+..++...-..+|+|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~----------~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR----------IHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS----------SEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe----------eEeccCCHHHHHHHHcCCCEEE
Confidence 46789999986 344444444444447999999999888887654321 1111001001100002579998
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+-.......+. -+.+++.+.+||||.++..
T Consensus 237 ~~~~~p~~~t~~--li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 237 GAVLVPGAKAPK--LVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp ECCCCTTSCCCC--CBCHHHHTTSCTTCEEEEG
T ss_pred ECCCcCCCCCcc--eecHHHHhcCCCCcEEEEE
Confidence 643211111001 1245567789999988765
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.76 E-value=4 Score=33.99 Aligned_cols=93 Identities=9% Similarity=-0.059 Sum_probs=56.5
Q ss_pred ceEEEeeccccHHHHHHHHhC---CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 159 LVALDCGSGIGRITKNLLIRY---FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~~~---~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
++||=.|| |.++..+++.. ..+|++++-++.-.+.... .+++++.+|+.++. -..+|+||
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------CCCeEEEecccccc--cCCCCEEE
Confidence 57999995 87777766532 2369999988765544332 23788889998866 45789999
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
..........+....+++.+.+.-..-+.|++.
T Consensus 69 ~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 69 ISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp ECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred ECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 766544333222334444444421222455543
No 402
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.46 E-value=0.38 Score=42.66 Aligned_cols=99 Identities=8% Similarity=0.036 Sum_probs=54.8
Q ss_pred CceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 158 HLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 158 ~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
+.+|+=+|+| .|.....++.....+|+++|.++.-++.+++.... .+.....+..++.-.-..+|+|+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 4789999986 44444445544333799999999988888766432 111111111111000025899986
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+-.......+. -+.+...+.++|||.++..
T Consensus 237 ~~~~~~~~~~~--li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 237 AVLVPGRRAPI--LVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp CCCCTTSSCCC--CBCHHHHTTSCTTCEEEET
T ss_pred CCCcCCCCCCe--ecCHHHHhhCCCCCEEEEE
Confidence 54332211001 1134466788999977764
No 403
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=85.59 E-value=3.5 Score=34.99 Aligned_cols=104 Identities=15% Similarity=0.053 Sum_probs=63.0
Q ss_pred CCceEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
.+.++|=.|++ .|. ++..|++.+. +|+.++.++...+.+++.... ..++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHH
Confidence 45678888866 333 4455565565 599999987655555444322 123678889988742 0
Q ss_pred -----CCCceeEEEecchhc----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023288 227 -----ETGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 -----~~~~fD~Iv~~~~l~----------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~e 269 (284)
.-+..|++|.+-.+. ..+.+++. .+++.+...++++|.+++.-
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 014789998665432 23333332 34556677778889888763
No 404
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.47 E-value=3.2 Score=34.72 Aligned_cols=104 Identities=20% Similarity=0.153 Sum_probs=63.0
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCC------------HHHHHHHHHHcCCCCCCCCCCCcceeEEEcCC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV------------SHFLDAARESLAPENHMAPDMHKATNFFCVPL 221 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S------------~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~ 221 (284)
.+.+||=.|++.|. ++..|++.+. +|+.+|.+ ...++.+....... ..++.++.+|+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------GRKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------TSCEEEEECCT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhc-------CCceEEEEccC
Confidence 35678877776553 3444554555 59999987 66666555444322 24578888998
Q ss_pred CCCC-----CC-----CCceeEEEecchhcc----CChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023288 222 QDFT-----PE-----TGRYDVIWVQWCIGH----LTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 222 ~~~~-----~~-----~~~fD~Iv~~~~l~~----~~~~~~~-----------~~l~~~~r~LkpGG~lii~ 268 (284)
.+.. +. -+..|++|.+-.+.. .+.+++. .+++.+...++++|.+++.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 8742 00 136899987654322 3333333 2445667777888888775
No 405
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=85.39 E-value=1.4 Score=38.59 Aligned_cols=91 Identities=5% Similarity=-0.055 Sum_probs=54.7
Q ss_pred ceEEEe-ecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------CCCCc
Q 023288 159 LVALDC-GSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------PETGR 230 (284)
Q Consensus 159 ~~VLDi-GcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~ 230 (284)
.+||=. |+| .|..+..+++....+|++++.++.-++.+++.-.. ..+..+-.++. .....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~------------~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA------------HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS------------EEEETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEECCcHHHHHHHHHHhcCCC
Confidence 455543 333 56666666665444799999999999988864221 11111111110 00126
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+|+|+-+-.- ..+..+.+.|+|||.+++.-.
T Consensus 234 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 234 PRIFLDAVTG---------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp CCEEEESSCH---------HHHHHHHHHSCTTCEEEECCC
T ss_pred CcEEEECCCC---------hhHHHHHhhhcCCCEEEEEec
Confidence 9999864431 234677889999999998743
No 406
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.04 E-value=7 Score=34.58 Aligned_cols=99 Identities=10% Similarity=-0.032 Sum_probs=64.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+.+||.|+.+.|.++..++.. .++.+.-|--.....+.++..+++. ...+++... +.. ..+.||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~----~~~~~~~~~-~~~---~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGID----ESSVKFLDS-TAD---YPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCC----GGGSEEEET-TSC---CCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCC----ccceEeccc-ccc---cccCCCEEEE
Confidence 4468999999999999877633 2455533655555666666554442 123444322 222 2367999887
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...= + ...+...+..+...|+||+.+++..
T Consensus 107 ~lpk-~--~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 107 KVPK-T--LALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp ECCS-C--HHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred EcCC-C--HHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 5541 1 2357788999999999999988763
No 407
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.90 E-value=0.54 Score=41.77 Aligned_cols=100 Identities=10% Similarity=0.041 Sum_probs=53.8
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
++.+|+=+|+| .|......+.....+|+++|.++.-++.+++.... .+.....+..++.-.-..+|+|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~----------~~~~~~~~~~~l~~~~~~~DvVi 234 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG----------RVITLTATEANIKKSVQHADLLI 234 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT----------SEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc----------eEEEecCCHHHHHHHHhCCCEEE
Confidence 45789999985 34444444444444799999999888877664422 11111111111100002589998
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+-...... ...-+.+++.+.+||||.++..
T Consensus 235 ~~~g~~~~~--~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 235 GAVLVPGAK--APKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp ECCC---------CCSCHHHHTTSCTTCEEEEC
T ss_pred ECCCCCccc--cchhHHHHHHHhhcCCCEEEEE
Confidence 654432100 0011245677888999987764
No 408
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.74 E-value=2.3 Score=32.29 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=52.6
Q ss_pred CCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCc
Q 023288 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (284)
Q Consensus 156 ~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 230 (284)
.++.+|+=+|||. |......+.....+|+++|.++..++.+++ . ....++.+|..+.. ..-..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~---------~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E---------FSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T---------CCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c---------CCCcEEEecCCCHHHHHHcCccc
Confidence 4567899999873 443333333333369999998765543321 1 11334555543311 11236
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+|+|+..-. .+.....+..+.+.+.|...++..
T Consensus 85 ad~Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~ 117 (155)
T 2g1u_A 85 ADMVFAFTN-----DDSTNFFISMNARYMFNVENVIAR 117 (155)
T ss_dssp CSEEEECSS-----CHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCEEEEEeC-----CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 898887543 223334555566666666666654
No 409
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.53 E-value=7.3 Score=32.25 Aligned_cols=89 Identities=13% Similarity=0.189 Sum_probs=54.4
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|.=||||. |. ++..+...+...|+++|.+++.++.+.+... +.. ..+..+.. ...|+|+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g------------~~~-~~~~~~~~---~~~Dvvi~ 74 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE------------AEY-TTDLAEVN---PYAKLYIV 74 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT------------CEE-ESCGGGSC---SCCSEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC------------Cce-eCCHHHHh---cCCCEEEE
Confidence 5788899973 33 3344444554348999999988887766532 111 22332221 25798887
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+-. +.....+++.+...++||..++-.
T Consensus 75 av~-----~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 75 SLK-----DSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCC-----HHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred ecC-----HHHHHHHHHHHHhhcCCCcEEEEC
Confidence 543 234457888888888887655543
No 410
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=84.37 E-value=5.2 Score=33.08 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=64.7
Q ss_pred CCceEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
.+.++|=.|++ .|. ++..|++.+. +|+.++.+....+.+.+.....+ ..++.++.+|+.+.. +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCSSSHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCCCHHHHHHHH
Confidence 35678888866 333 4555565665 59999888765555555443321 125788999998753 0
Q ss_pred C-----CCceeEEEecchhc----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023288 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~-----~~~fD~Iv~~~~l~----------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~e 269 (284)
. -+..|+++.+-.+. ..+.+++. .+++.+...++++|.+++.-
T Consensus 79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 0 13689888664332 23333333 25567777888889888763
No 411
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.53 E-value=7.6 Score=31.12 Aligned_cols=89 Identities=12% Similarity=0.029 Sum_probs=54.5
Q ss_pred eEEEeeccccHHHHHHHH----hCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023288 160 VALDCGSGIGRITKNLLI----RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (284)
Q Consensus 160 ~VLDiGcGtG~~s~~l~~----~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (284)
+|+=+|+ |.++..+++ .+. .|+++|.+++.++...+.. ...++.+|..+.. ..-..+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------------~~~~i~gd~~~~~~l~~a~i~~a 66 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------------KATIIHGDGSHKEILRDAEVSKN 66 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------------SSEEEESCTTSHHHHHHHTCCTT
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------------CCeEEEcCCCCHHHHHhcCcccC
Confidence 4666776 445444433 344 5999999999888765442 2456778876532 112468
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|+|++... ++.....+....+.+.|...++..
T Consensus 67 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 67 DVVVILTP-----RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CEEEECCS-----CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred CEEEEecC-----CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 88886543 223345566666667777766653
No 412
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=81.85 E-value=3.1 Score=37.47 Aligned_cols=45 Identities=16% Similarity=0.002 Sum_probs=38.1
Q ss_pred CceEEEeeccccHHHHHHHHhC--CCc----EEEEeCCHHHHHHHHHHcCC
Q 023288 158 HLVALDCGSGIGRITKNLLIRY--FNE----VDLLEPVSHFLDAARESLAP 202 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~--~~~----v~gvD~S~~~l~~ar~~~~~ 202 (284)
..+|+|+=||.|.....+...+ +.- |.++|+++..++.-+.++..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 4699999999999999887766 334 88899999999998888764
No 413
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=80.83 E-value=7.3 Score=32.85 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=61.4
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHH-HHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~-~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
++.+||=.|++.|. ++..|++.+. +|+.++.+.. ..+...+..... ..++.++.+|+.+.. +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKE-------GVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT-------TCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 45678888876553 3444454555 5999988764 344444333322 245788889988742 00
Q ss_pred -----CCceeEEEecchh-------ccCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023288 228 -----TGRYDVIWVQWCI-------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l-------~~~~~~~~~-----------~~l~~~~r~LkpGG~lii~ 268 (284)
-+..|++|.+-.. ..++.+++. .+++.+...++++|.+++.
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 1368999866332 223434332 3456677778888988775
No 414
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.69 E-value=9 Score=33.65 Aligned_cols=101 Identities=13% Similarity=0.024 Sum_probs=58.1
Q ss_pred CceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCC-CCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENH-MAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 158 ~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
..+|.=||+|. |. ++..+++.+. +|+.+|.++..++..++......+ .......++.+. .|+.+. -...|+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~~~aDvV 103 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---LEGVTDI 103 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---HTTCCEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---HhcCCEE
Confidence 46799999983 43 3343443344 599999999988887765321100 000111122221 222110 1247888
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+.+- +......+++++...++|+-.++..
T Consensus 104 ilaV-----p~~~~~~vl~~i~~~l~~~~ivvs~ 132 (356)
T 3k96_A 104 LIVV-----PSFAFHEVITRMKPLIDAKTRIAWG 132 (356)
T ss_dssp EECC-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EECC-----CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8653 3446778999999999988766554
No 415
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.40 E-value=11 Score=31.51 Aligned_cols=88 Identities=14% Similarity=0.063 Sum_probs=52.0
Q ss_pred eEEEeeccc-cH-HHHHHHHhCCC-cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCC-ceeEEE
Q 023288 160 VALDCGSGI-GR-ITKNLLIRYFN-EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETG-RYDVIW 235 (284)
Q Consensus 160 ~VLDiGcGt-G~-~s~~l~~~~~~-~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~fD~Iv 235 (284)
+|.=||+|. |. ++..+...+.. +|+++|.++..++.+++. |. ... ...+..+. -. ..|+|+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~-------~~~-~~~~~~~~---~~~~aDvVi 67 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI-------IDE-GTTSIAKV---EDFSPDFVM 67 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS-------CSE-EESCGGGG---GGTCCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CC-------ccc-ccCCHHHH---hcCCCCEEE
Confidence 577788874 33 33434434442 699999999888877643 11 001 11222211 12 578888
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
.+-. ......++.++...++|+..++.
T Consensus 68 lavp-----~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSP-----VRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp ECSC-----HHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EcCC-----HHHHHHHHHHHHhhCCCCcEEEE
Confidence 6543 33455788888888999886554
No 416
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.01 E-value=2.7 Score=38.89 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.++.+|+=+|+| .|......++....+|+++|.++.-++.+++.- .++ .++.+. . ...|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G-------------a~~--~~l~e~-l--~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG-------------FDV--VTVEEA-I--GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------------CEE--CCHHHH-G--GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-------------CEE--ecHHHH-H--hCCCEE
Confidence 467899999987 344444445444447999999998877776431 111 122111 1 358999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
+..-.-.++- -.+..+.+||||+++..-
T Consensus 334 i~atgt~~~i-------~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 334 VTATGNKDII-------MLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp EECSSSSCSB-------CHHHHHHSCTTCEEEECS
T ss_pred EECCCCHHHH-------HHHHHHhcCCCcEEEEeC
Confidence 8763222211 124566789999988753
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.23 E-value=12 Score=30.99 Aligned_cols=85 Identities=13% Similarity=0.031 Sum_probs=52.1
Q ss_pred eEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEec
Q 023288 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (284)
Q Consensus 160 ~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~ 237 (284)
+|.=||||. |. ++..+.+.+. +|+++|.++..++.+++. +. . .. ...+..+. ...|+|+.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~-----~--~~-~~~~~~~~----~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVER----QL-----V--DE-AGQDLSLL----QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TS-----C--SE-EESCGGGG----TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhC----CC-----C--cc-ccCCHHHh----CCCCEEEEE
Confidence 577788874 32 3344444444 699999999888776542 11 0 01 12233322 357988875
Q ss_pred chhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 238 ~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
-. ......+++++...++||..++
T Consensus 65 v~-----~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 65 TP-----IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp SC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred CC-----HHHHHHHHHHHHhhCCCCCEEE
Confidence 43 3355678888888898887654
No 418
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=79.08 E-value=1.6 Score=38.08 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=52.9
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
..++.+||=.|+ |.|..+..+++.. ...|++++ ++.-.+.++ ... ..++. .-.++. .
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga-----------~~~~~-~~~~~~~~~~~~ 204 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV-----------THLFD-RNADYVQEVKRI 204 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS-----------SEEEE-TTSCHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC-----------cEEEc-CCccHHHHHHHh
Confidence 567889999998 3677777777554 44788888 665555554 211 01111 111110 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
..+.+|+|+-+-. . ..+..+.+.|+|||++++.-
T Consensus 205 ~~~g~Dvv~d~~g-------~--~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDCLC-------G--DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CTTCEEEEEEECC----------------CTTEEEEEEEEEEC
T ss_pred cCCCceEEEECCC-------c--hhHHHHHHHhhcCCEEEEEC
Confidence 1257999995432 1 12366789999999999864
No 419
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=78.99 E-value=1 Score=34.09 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=28.1
Q ss_pred CCCCceeEEEecchhccCChhhH-HHHHHHHHhcCCCCcEEEE
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDF-VSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~-~~~l~~~~r~LkpGG~lii 267 (284)
+++..||.|+...--.. ....+ ..++..+...|||||.|.-
T Consensus 55 Lp~stYD~V~~lt~~~~-~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQ-TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSS-CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCcc-chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45679999985432110 00012 5899999999999999984
No 420
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.93 E-value=8.2 Score=37.11 Aligned_cols=114 Identities=11% Similarity=0.071 Sum_probs=71.0
Q ss_pred CCceEEEeeccccHHHHHHHHhCC-------C--cEEEEeCCHHHHHHHHHHcCCC-------------CCC-----CCC
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYF-------N--EVDLLEPVSHFLDAARESLAPE-------------NHM-----APD 209 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~-------~--~v~gvD~S~~~l~~ar~~~~~~-------------~~~-----~~~ 209 (284)
+...|+-+|||-=.....+..... . .++=||.. ..++.=++.+... ... ...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p-~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYS-DLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECH-HHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccH-HHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 456899999998777776764422 2 34555553 3333222222210 000 000
Q ss_pred CCcceeEEEcCCCCCC----------C-CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEeccCC
Q 023288 210 MHKATNFFCVPLQDFT----------P-ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENIAR 273 (284)
Q Consensus 210 ~~~~~~~~~~d~~~~~----------~-~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~~~ 273 (284)
...+..++.+|+.+.. + ....-=++++-.++.|++.++..++|+.+.+. |+|.+++.|.+.+
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 0135678888998741 1 33445677788899999999999999999864 7888888886654
No 421
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=78.35 E-value=6.3 Score=34.35 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=53.5
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcE-EEEeCCH---HHHHHHHHHcCCCCCCCCCCCcceeEEE---cCCCCCC
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEV-DLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFC---VPLQDFT 225 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v-~gvD~S~---~~l~~ar~~~~~~~~~~~~~~~~~~~~~---~d~~~~~ 225 (284)
..++.+||=+|+ |.|.++..+++....++ ..++.++ +-++.+++.-.. .-++... .++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAE---------HVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCS---------EEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCc---------EEEecCcchHHHHHHHH
Confidence 567889999997 57888888887544434 4455443 235566543211 0011100 1121211
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
...+.+|+|+-+-. . ..+..+.+.|+|||++++.-
T Consensus 236 ~~~~~~Dvvid~~g-----~----~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVG-----G----KSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSC-----H----HHHHHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCC-----c----HHHHHHHHhhCCCCEEEEEe
Confidence 11124899885432 1 12245789999999998863
No 422
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=77.70 E-value=5.4 Score=32.99 Aligned_cols=104 Identities=12% Similarity=-0.040 Sum_probs=60.7
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEE-eCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gv-D~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
.+.++|=.|++.|. ++..|++.+. +|+.+ +.+....+...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKL-------GRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTT-------TSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCceEEEEcCCCCHHHHHHHHH
Confidence 35678878876653 3444555555 48777 66666666555544332 245778889988742 00
Q ss_pred -----CCceeEEEecchhc-------cCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023288 228 -----TGRYDVIWVQWCIG-------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l~-------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~ 268 (284)
-+..|+++.+-... ..+.+++. .+.+.+...++++|.+++.
T Consensus 79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 13789998664322 23333322 2344556666677877765
No 423
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.31 E-value=9.4 Score=32.74 Aligned_cols=102 Identities=16% Similarity=0.044 Sum_probs=57.0
Q ss_pred CCceEEEeecc-ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 157 QHLVALDCGSG-IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
...+|.=||+| .|. ++..|++.+. +|+.+ .+++.++..++.-............++.. ..+... ...+|+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~----~~~~D~v 90 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA----VQGADLV 90 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG----GTTCSEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH----cCCCCEE
Confidence 34689999998 343 4444444444 69999 89888887776421100000000001111 112221 1468998
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+.+-- ......+++.+...++|+..++..-|
T Consensus 91 ilavk-----~~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 91 LFCVK-----STDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp EECCC-----GGGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred EEEcc-----cccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 87543 23566889999999999887766544
No 424
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=77.23 E-value=10 Score=31.28 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=64.9
Q ss_pred CCceEEEeec----cccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGS----GIGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGc----GtG~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
+++++|=-|+ |.|. .+..|++.+. +|+.+|.++..++.+.+.....+ ..++.++.+|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~ 77 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLN------QPEAHLYQIDVQSDEEVINGF 77 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGT------CSSCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC------CCcEEEEEccCCCHHHHHHHH
Confidence 4567888885 4454 4555665666 59999999888877776655422 235778889987642 0
Q ss_pred -----CCCceeEEEecchhc----------cCChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023288 227 -----ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 -----~~~~fD~Iv~~~~l~----------~~~~~~~~~-----------~l~~~~r~LkpGG~lii~e 269 (284)
.-+..|+++.+-.+. ..+.+++.. ..+.+...++.+|.++..-
T Consensus 78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 115789888653321 222222221 2234556778899888764
No 425
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=77.14 E-value=15 Score=30.76 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=51.9
Q ss_pred ceEEEeec-cc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 159 LVALDCGS-GI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 159 ~~VLDiGc-Gt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.+|.=||| |. |. ++..+...+. +|+++|.++..++.+++. +. .. .+..+. -...|+|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~----g~---------~~--~~~~~~---~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGM----GI---------PL--TDGDGW---IDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHT----TC---------CC--CCSSGG---GGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhc----CC---------Cc--CCHHHH---hcCCCEEE
Confidence 47888999 73 33 3444444444 699999999888777651 11 11 121111 13579888
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
.+-. +.....+++++...++||..++
T Consensus 73 ~av~-----~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 73 LALP-----DNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ECSC-----HHHHHHHHHHHGGGSCTTCEEE
T ss_pred EcCC-----chHHHHHHHHHHHhCCCCCEEE
Confidence 6543 3346678888888888876544
No 426
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.97 E-value=9.3 Score=32.45 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=52.3
Q ss_pred CceEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 158 ~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
..+|.=||+|. | .++..+++.+. +|+++|.++..++.+.+.- ......+..+.. ...|+|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g-------------~~~~~~~~~e~~---~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEG-------------ACGAAASAREFA---GVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTT-------------CSEEESSSTTTT---TTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC-------------CccccCCHHHHH---hcCCEEE
Confidence 35788898883 3 23444454555 5999999999888776541 111233443322 3468888
Q ss_pred ecchhccCChhhHHHHH---HHHHhcCCCCcEEEE
Q 023288 236 VQWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l---~~~~r~LkpGG~lii 267 (284)
.+-.- +.....++ +.+...++||..++-
T Consensus 70 ~~vp~----~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 70 ILVVN----AAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp ECCSS----HHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred EECCC----HHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 65431 12334454 566677888776553
No 427
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=76.67 E-value=3.7 Score=36.94 Aligned_cols=42 Identities=12% Similarity=-0.015 Sum_probs=33.0
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~ 198 (284)
++.+|+=+|+| .|..+..++.....+|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 56899999998 4566666665555579999999988888876
No 428
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=76.67 E-value=21 Score=29.15 Aligned_cols=75 Identities=13% Similarity=0.025 Sum_probs=45.8
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (284)
.+.+||=.|++.|. ++..|++.+. +|++++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSK-------GFKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHH
Confidence 34578877765442 3334444555 5999999988776654443221 234778888987642 10
Q ss_pred -----CCceeEEEecch
Q 023288 228 -----TGRYDVIWVQWC 239 (284)
Q Consensus 228 -----~~~fD~Iv~~~~ 239 (284)
.+..|++|.+-.
T Consensus 80 ~~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHHTTTCCCEEEECCC
T ss_pred HHHHcCCCCCEEEECCC
Confidence 057899987654
No 429
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=76.66 E-value=6.2 Score=33.44 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=62.0
Q ss_pred CCceEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
.+.++|=.|++ .|. ++..|++.+. +|+.++.++...+...+.... ...+.++.+|+.+.. +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~ 99 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAES--------LGVKLTVPCDVSDAESVDNMF 99 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHHHH
Confidence 35678888874 343 4555565665 599999987554444443322 122567888988742 1
Q ss_pred C-----CCceeEEEecchhc----------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023288 227 E-----TGRYDVIWVQWCIG----------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~-----~~~fD~Iv~~~~l~----------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~e 269 (284)
. -+..|++|.+-.+. ..+.+++. .+++.+...++.+|.+++.-
T Consensus 100 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 100 KVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 0 14689999765432 23333332 24456667778889888763
No 430
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.64 E-value=1.8 Score=36.23 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=34.4
Q ss_pred eEEEcCCCCC--CCCCCceeEEEecchhccC--------Chh----hHHHHHHHHHhcCCCCcEEEEE
Q 023288 215 NFFCVPLQDF--TPETGRYDVIWVQWCIGHL--------TDD----DFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 215 ~~~~~d~~~~--~~~~~~fD~Iv~~~~l~~~--------~~~----~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.++++|..+. ..++++||+|++.-....- ..+ -+...+.++.++|+|||.+++.
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4556665332 1334689999876543221 111 2457888899999999998885
No 431
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=76.56 E-value=5.5 Score=32.87 Aligned_cols=106 Identities=17% Similarity=-0.020 Sum_probs=61.7
Q ss_pred CCCCceEEEeecc--cc--H-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 155 NNQHLVALDCGSG--IG--R-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 155 ~~~~~~VLDiGcG--tG--~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
..++.+||=.|++ .| . ++..|++.+. +|+.++.+....+.+++..... ..+.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~ 81 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEF--------GSELVFPCDVADDAQIDA 81 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHT--------TCCCEEECCTTCHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHc--------CCcEEEECCCCCHHHHHH
Confidence 3456789989964 33 2 3344454555 5999988765444444433221 23678889988742
Q ss_pred -C-----CCCceeEEEecchhcc-----------CChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023288 226 -P-----ETGRYDVIWVQWCIGH-----------LTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~-----~~~~fD~Iv~~~~l~~-----------~~~~~~~-----------~~l~~~~r~LkpGG~lii~e 269 (284)
+ .-+..|++|.+-.+.. .+.+++. .+++.+...++++|.+++.-
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 82 LFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 0 0147899997654322 3434333 23455666677788877753
No 432
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=76.52 E-value=19 Score=30.20 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=55.3
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|.=||+|. |. ++..+++.+. +|+++|.+++.++..++..............++.+. +..+....-..+|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEEEE
Confidence 4788899983 33 3343444444 699999999888877654110000000000001110 11111100026898887
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+-. ......+++.+...++|+..++..-+
T Consensus 81 ~v~-----~~~~~~v~~~l~~~l~~~~~iv~~~~ 109 (316)
T 2ew2_A 81 LTK-----AQQLDAMFKAIQPMITEKTYVLCLLN 109 (316)
T ss_dssp CSC-----HHHHHHHHHHHGGGCCTTCEEEECCS
T ss_pred Eec-----cccHHHHHHHHHHhcCCCCEEEEecC
Confidence 653 23456788899999998876665433
No 433
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=75.91 E-value=2.5 Score=34.89 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=49.3
Q ss_pred ceEEEeeccc-c-HHHHHHHHhCC---CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 159 LVALDCGSGI-G-RITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~---~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
.+|.=||||. | .++..+.+.+. .+|+++|.+++.++...+.... .. ..+..+. -...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~------------~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL------------TT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC------------EE-CSCHHHH---HHHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC------------EE-eCChHHH---HHhCCE
Confidence 3677889883 2 34455555554 1699999999988877654321 11 1111110 024688
Q ss_pred EEecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 234 IWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 234 Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
|+.+- ++.....+++++...++||..++
T Consensus 67 Vilav-----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 67 LILSI-----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EEECS-----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEEe-----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 87654 23356677788877787776544
No 434
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=75.73 E-value=9.9 Score=31.52 Aligned_cols=106 Identities=18% Similarity=0.133 Sum_probs=62.2
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeC-CHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEP-VSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~-S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
.+.++|=.|++.|. ++..|++.+. +|+.++. +...++...+.+... ..++.++.+|+.+.. +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKAL-------GSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHH
Confidence 35678888876653 3444555555 4888765 455555544443321 245778889988742 00
Q ss_pred -----CCceeEEEecchhc------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEec
Q 023288 228 -----TGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l~------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~e~ 270 (284)
-+..|++|.+-... .++.+++. .+.+.+...++++|.+++.-.
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 13689998664432 22333332 345667778888998887633
No 435
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=75.10 E-value=9.6 Score=32.40 Aligned_cols=88 Identities=14% Similarity=0.018 Sum_probs=51.0
Q ss_pred CCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~I 234 (284)
.+.+|+=||+|. |......+.....+|+++|.++.-.+.+.+. + ++... .++.+. -...|+|
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~----g---------~~~~~~~~l~~~---l~~aDvV 219 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEM----G---------LVPFHTDELKEH---VKDIDIC 219 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----T---------CEEEEGGGHHHH---STTCSEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC----C---------CeEEchhhHHHH---hhCCCEE
Confidence 567899999873 3333333333334799999998765544331 1 11111 222221 1368999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+..-..+.+.. .....+|||+.++-.
T Consensus 220 i~~~p~~~i~~--------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 220 INTIPSMILNQ--------TVLSSMTPKTLILDL 245 (300)
T ss_dssp EECCSSCCBCH--------HHHTTSCTTCEEEEC
T ss_pred EECCChhhhCH--------HHHHhCCCCCEEEEE
Confidence 98777654441 234678999876543
No 436
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=74.67 E-value=1.7 Score=38.74 Aligned_cols=42 Identities=14% Similarity=-0.024 Sum_probs=31.1
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~ 198 (284)
++.+|+=+|+| .|..+..++.....+|+++|.++.-++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 57899999998 4555555555544479999999887777765
No 437
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=74.50 E-value=3.9 Score=36.50 Aligned_cols=42 Identities=17% Similarity=0.080 Sum_probs=32.0
Q ss_pred CCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Q 023288 157 QHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARE 198 (284)
Q Consensus 157 ~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~ 198 (284)
++.+|+=+|+| .|..+..++.....+|+++|.++.-++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56799999998 4555555555544479999999988888876
No 438
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=73.07 E-value=2.9 Score=34.45 Aligned_cols=102 Identities=21% Similarity=0.074 Sum_probs=58.2
Q ss_pred CceEEEeeccccHHHHHH----HH-hCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 158 HLVALDCGSGIGRITKNL----LI-RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l----~~-~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
+.+||=.|+ +|.++..+ ++ .+. +|++++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlITGa-sggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 4 IHVALVTGG-NKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAE-------GLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHT-------TCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhc-------CCeeEEEECCCCCHHHHHHHHH
Confidence 456776665 44444444 43 344 6999999987666655544321 134678889988642 00
Q ss_pred -----CCceeEEEecchhccC-----C-hhhH-----------HHHHHHHHhcCCCCcEEEEE
Q 023288 228 -----TGRYDVIWVQWCIGHL-----T-DDDF-----------VSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l~~~-----~-~~~~-----------~~~l~~~~r~LkpGG~lii~ 268 (284)
-+.+|+||.+-..... + .+++ ..+++.+...++++|.+++.
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1368999865433211 1 1222 12445566666677887775
No 439
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=73.01 E-value=15 Score=30.49 Aligned_cols=104 Identities=19% Similarity=0.105 Sum_probs=60.7
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCC-HHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV-SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S-~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
.+.++|=.|++.|. ++..|++.+. +|+.++.. ...++...+.+... ..++.++.+|+.+.. +.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQA-------GGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHHHHH
Confidence 45678888876653 3444555555 48888554 44455444433221 235778889987642 00
Q ss_pred -----CCceeEEEecchh------ccCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023288 228 -----TGRYDVIWVQWCI------GHLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l------~~~~~~~~~-----------~~l~~~~r~LkpGG~lii~ 268 (284)
-+..|++|.+-.+ ...+.+++. .+++.+.+.++++|.+++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1368999866433 223333332 3456677788888888776
No 440
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=72.95 E-value=9.5 Score=32.93 Aligned_cols=100 Identities=13% Similarity=0.064 Sum_probs=54.4
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCC--cceeEEEcCCCCCCCCCCceeEE
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMH--KATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.+|.=||+|. |. ++..+.+.+. +|+++|.++..++..++..... +...... .++.....+..+. -..+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAII-AEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEE-EESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeE-EeccccccccccceecCCHHHH---HhcCCEE
Confidence 5788899984 33 3343444444 6999999998888776652100 0000000 0000011121110 1357988
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+.+-.-. ....+++.+...++||..++..
T Consensus 80 i~~v~~~-----~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAI-----HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGG-----GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCch-----HHHHHHHHHHHhCCCCCEEEEc
Confidence 8654322 3457888898899987765544
No 441
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=72.85 E-value=2 Score=37.30 Aligned_cols=55 Identities=11% Similarity=0.032 Sum_probs=37.0
Q ss_pred eeEE-EcCCCCC--CCCCCceeEEEecchhccC--------C-hhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 214 TNFF-CVPLQDF--TPETGRYDVIWVQWCIGHL--------T-DDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 214 ~~~~-~~d~~~~--~~~~~~fD~Iv~~~~l~~~--------~-~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
..++ ++|..+. .+++++||+|++.-....- . ...+...+.++.++|+|||.+++.
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4566 7776542 2345689999977554321 0 013567888899999999999885
No 442
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=72.59 E-value=18 Score=30.86 Aligned_cols=98 Identities=14% Similarity=0.047 Sum_probs=54.1
Q ss_pred ceEEEeecc-cc-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHc-CCCCCCCCCCCcceeEE----EcCCCCCCCCCCce
Q 023288 159 LVALDCGSG-IG-RITKNLLIRYFNEVDLLEPVSHFLDAARESL-APENHMAPDMHKATNFF----CVPLQDFTPETGRY 231 (284)
Q Consensus 159 ~~VLDiGcG-tG-~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~-~~~~~~~~~~~~~~~~~----~~d~~~~~~~~~~f 231 (284)
.+|+=||+| .| .++..|.+.+ .+|+.++-++ .+..++.- ...+. ......+. ..+..+. ...+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~~--~~~i~~~Gl~~~~~----~~g~~~~~~~~~~~~~~~~---~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG-HCVSVVSRSD--YETVKAKGIRIRSA----TLGDYTFRPAAVVRSAAEL---ETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT-CEEEEECSTT--HHHHHHHCEEEEET----TTCCEEECCSCEESCGGGC---SSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEeCCh--HHHHHhCCcEEeec----CCCcEEEeeeeeECCHHHc---CCCC
Confidence 478888998 33 3344444344 4699999887 25554431 00000 00111110 1122211 1368
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEecc
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKENI 271 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~~ 271 (284)
|+|+.+---..+. .+++.+...++|+..++..-|-
T Consensus 73 DlVilavK~~~~~-----~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 73 DCTLLCIKVVEGA-----DRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp SEEEECCCCCTTC-----CHHHHHTTSCCTTCEEEEECSS
T ss_pred CEEEEecCCCChH-----HHHHHHHhhcCCCCEEEEeCCC
Confidence 9998766544443 5788889999999877766553
No 443
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=72.42 E-value=14 Score=26.71 Aligned_cols=90 Identities=13% Similarity=-0.003 Sum_probs=47.4
Q ss_pred ceEEEeeccccHHHHHHHH---hCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023288 159 LVALDCGSGIGRITKNLLI---RYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (284)
Q Consensus 159 ~~VLDiGcGtG~~s~~l~~---~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (284)
.+|+=+||| ..+..++. ....+|+++|.++..++.+++. ...++.+|..+.. ..-..+
T Consensus 7 ~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-------------~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 7 KQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-------------ATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-------------CSEEEECCTTCHHHHHTTTGGGC
T ss_pred CcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-------------CCEEEEeCCCCHHHHHhcCCCCC
Confidence 468889975 44433332 2223599999988665533221 1234556654321 112468
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|+|+.+-.-. .+....+....+.+.|. .+++.
T Consensus 72 d~vi~~~~~~----~~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 72 EYVIVAIGAN----IQASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp SEEEECCCSC----HHHHHHHHHHHHHTTCS-EEEEE
T ss_pred CEEEECCCCc----hHHHHHHHHHHHHcCCC-eEEEE
Confidence 9988654321 02223444555566775 55543
No 444
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=72.36 E-value=2.2 Score=37.37 Aligned_cols=98 Identities=8% Similarity=-0.095 Sum_probs=54.7
Q ss_pred CCCC-ceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHH----HHHHHHHcCCCCCCCCCCCcceeEEE---cCCCC-
Q 023288 155 NNQH-LVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHF----LDAARESLAPENHMAPDMHKATNFFC---VPLQD- 223 (284)
Q Consensus 155 ~~~~-~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~----l~~ar~~~~~~~~~~~~~~~~~~~~~---~d~~~- 223 (284)
..++ .+||=+|+ |.|..+..+++....+++++.-++.. .+.+++.-.. .-++... .++.+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---------~vi~~~~~~~~~~~~~ 234 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---------QVITEDQNNSREFGPT 234 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---------EEEEHHHHHCGGGHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---------EEEecCccchHHHHHH
Confidence 5567 89999986 57788888887544467777644432 4555433211 0011110 11110
Q ss_pred CC-C---CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 224 FT-P---ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 224 ~~-~---~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+. . ..+.+|+|+-+-. . . ... .+.+.|++||++++.-.
T Consensus 235 i~~~t~~~~~g~Dvvid~~G-----~-~--~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 235 IKEWIKQSGGEAKLALNCVG-----G-K--SST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHHHHHTCCEEEEEESSC-----H-H--HHH-HHHHTSCTTCEEEECCC
T ss_pred HHHHhhccCCCceEEEECCC-----c-h--hHH-HHHHHhccCCEEEEecC
Confidence 00 0 1246999985433 1 1 233 66799999999988643
No 445
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=72.18 E-value=25 Score=28.84 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=54.7
Q ss_pred CceEEEeeccc-cHH----HHHHHHhCCCcEEEEeCCH---HHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 158 HLVALDCGSGI-GRI----TKNLLIRYFNEVDLLEPVS---HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 158 ~~~VLDiGcGt-G~~----s~~l~~~~~~~v~gvD~S~---~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
+.+||=.|++. |.+ +..|++.+. +|++++.++ ..++...+... ...++.+|+.+..
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~-----------~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG-----------SDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT-----------CCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC-----------CcEEEEccCCCHHHHHH
Confidence 45788888651 333 333444454 599999876 33333333221 1357778887632
Q ss_pred ------CCCCceeEEEecchhcc-----------CChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023288 226 ------PETGRYDVIWVQWCIGH-----------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ------~~~~~fD~Iv~~~~l~~-----------~~~~~~~~-----------~l~~~~r~LkpGG~lii~e 269 (284)
-.-+..|++|.+-.+.. .+.+++.. +++.+...++++|.+++.-
T Consensus 77 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp HHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 11247899987654322 34343332 3345556666678777753
No 446
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=72.01 E-value=2.5 Score=37.28 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=41.9
Q ss_pred CCCceEEEeecc-ccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-CC--CCce
Q 023288 156 NQHLVALDCGSG-IGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-PE--TGRY 231 (284)
Q Consensus 156 ~~~~~VLDiGcG-tG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~--~~~f 231 (284)
.+.++||=+||| .|......+.+.. +|+..|.+..-++.+++. +..+..|+.+.. .. -..+
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~~~-~v~~~~~~~~~~~~~~~~--------------~~~~~~d~~d~~~l~~~~~~~ 78 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKDEF-DVYIGDVNNENLEKVKEF--------------ATPLKVDASNFDKLVEVMKEF 78 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTTS-EEEEEESCHHHHHHHTTT--------------SEEEECCTTCHHHHHHHHTTC
T ss_pred CCccEEEEECCCHHHHHHHHHHhcCC-CeEEEEcCHHHHHHHhcc--------------CCcEEEecCCHHHHHHHHhCC
Confidence 356789999996 4554444443443 699999999888776433 334556665432 00 1367
Q ss_pred eEEEecc
Q 023288 232 DVIWVQW 238 (284)
Q Consensus 232 D~Iv~~~ 238 (284)
|+|++.-
T Consensus 79 DvVi~~~ 85 (365)
T 3abi_A 79 ELVIGAL 85 (365)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9998754
No 447
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=71.85 E-value=18 Score=29.75 Aligned_cols=77 Identities=21% Similarity=0.179 Sum_probs=46.1
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (284)
+.+||=.|++.|. ++..|++.+. +|++++.++..++...+.+..... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFE-----PQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSC-----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcC-----CCceEEEecCCCCHHHHHHHHHHH
Confidence 4568877765442 3344444555 599999998777665554432100 235778889987642 00
Q ss_pred ---CCceeEEEecchh
Q 023288 228 ---TGRYDVIWVQWCI 240 (284)
Q Consensus 228 ---~~~fD~Iv~~~~l 240 (284)
-+..|++|.+-..
T Consensus 81 ~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1357999876543
No 448
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.80 E-value=11 Score=30.56 Aligned_cols=74 Identities=15% Similarity=0.063 Sum_probs=48.1
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC---------
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT--------- 225 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 225 (284)
+.++|=.|++.|. ++..|++.+. +|++++.++..++...+.+... ..++.++.+|+.+..
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEK-------GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHH
Confidence 4577877766552 3444555555 5999999998877766655432 235788889987642
Q ss_pred -CCCCceeEEEecch
Q 023288 226 -PETGRYDVIWVQWC 239 (284)
Q Consensus 226 -~~~~~fD~Iv~~~~ 239 (284)
-..+..|++|.+-.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 01246899986654
No 449
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=71.52 E-value=13 Score=31.41 Aligned_cols=88 Identities=14% Similarity=-0.022 Sum_probs=50.4
Q ss_pred CCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEE-cCCCCCCCCCCceeEE
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFC-VPLQDFTPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~fD~I 234 (284)
.+.+|+=+|+|. |......+.....+|+++|.++.-.+.+++. . ++... .++.+. -...|+|
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g------------~~~~~~~~l~~~---l~~aDvV 217 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-G------------MEPFHISKAAQE---LRDVDVC 217 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-T------------SEEEEGGGHHHH---TTTCSEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-C------------CeecChhhHHHH---hcCCCEE
Confidence 567899999873 4333333333334799999998766555421 1 11221 122111 1368999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+..-..+.+.. +....+|||+.++-.
T Consensus 218 i~~~p~~~i~~--------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVVTA--------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCBCH--------HHHHHSCTTCEEEEC
T ss_pred EECCChHHhCH--------HHHHhcCCCCEEEEe
Confidence 98766554441 234468999877654
No 450
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=71.41 E-value=10 Score=32.05 Aligned_cols=105 Identities=14% Similarity=0.051 Sum_probs=60.5
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCC--HHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPV--SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S--~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
++.++|=.|++.|. ++..|++.+. +|+.++.+ ....+...+..... ..++.++.+|+.+.. +
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~ 119 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEEC-------GRKAVLLPGDLSDESFARSLV 119 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHT-------TCCEEECCCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHc-------CCcEEEEEecCCCHHHHHHHH
Confidence 35678878876553 3344454555 58888876 33444444333221 235777888887642 0
Q ss_pred C-----CCceeEEEecchhc-------cCChhhHH-----------HHHHHHHhcCCCCcEEEEEe
Q 023288 227 E-----TGRYDVIWVQWCIG-------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~-----~~~fD~Iv~~~~l~-------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~e 269 (284)
. -+..|++|.+-... .++.+++. .+++.+...++++|.+++.-
T Consensus 120 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 120 HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 0 14689998665432 22333332 34556677888889888763
No 451
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=71.40 E-value=34 Score=28.40 Aligned_cols=88 Identities=16% Similarity=0.068 Sum_probs=52.0
Q ss_pred ceEEEeeccc-c-HHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 159 LVALDCGSGI-G-RITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.+|.=||||. | .++..+...+ ..+|+++|.++..++.+++. +. ......+..+.. ...|+|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~--------~~~~~~~~~~~~---~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER----GI--------VDEATADFKVFA---ALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT----TS--------CSEEESCTTTTG---GGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc----CC--------cccccCCHHHhh---cCCCEEE
Confidence 4788899885 2 3344445443 23699999999888776552 11 001222333211 3578888
Q ss_pred ecchhccCChhhHHHHHHHHHhc-CCCCcEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~-LkpGG~li 266 (284)
.+-. ......+++++... ++||..++
T Consensus 72 lavp-----~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVP-----IKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSC-----HHHHHHHHHHHHTSCCCTTCEEE
T ss_pred EcCC-----HHHHHHHHHHHHhcCCCCCCEEE
Confidence 6543 22345677788777 88776554
No 452
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=71.33 E-value=17 Score=29.28 Aligned_cols=90 Identities=12% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CceEEEeeccccHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCce
Q 023288 158 HLVALDCGSGIGRITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGRY 231 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~f 231 (284)
..+|+=+|| |..+..+++.... .|+++|.++..++.++ .. +.++.+|..+.. ..-...
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~---~~-----------~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR---SG-----------ANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH---TT-----------CEEEESCTTCHHHHHHTTCTTC
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh---cC-----------CeEEEcCCCCHHHHHhcCcchh
Confidence 457888887 5666666654322 1999999998877665 11 457788876532 122468
Q ss_pred eEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 232 DVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 232 D~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
|+|++... +++....+....+.+.|+..++..
T Consensus 73 d~vi~~~~-----~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 73 RAVIVDLE-----SDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp SEEEECCS-----CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred cEEEEcCC-----CcHHHHHHHHHHHHHCCCCeEEEE
Confidence 88887532 223334555666778887666654
No 453
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.33 E-value=7.9 Score=32.17 Aligned_cols=74 Identities=15% Similarity=0.107 Sum_probs=45.6
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHc---CCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESL---APENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~---~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
+.+||=.|++.|. ++..|++.+. +|++++.++..++...+.+ ... ..++.++.+|+.+.. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVS-------EQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCC-------GGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccC-------CCceeEEecccCCHHHHHHHH
Confidence 4567777765442 3334444555 5999999988777665554 221 245778889987642 1
Q ss_pred C-----CCceeEEEecch
Q 023288 227 E-----TGRYDVIWVQWC 239 (284)
Q Consensus 227 ~-----~~~fD~Iv~~~~ 239 (284)
. -+..|++|.+-.
T Consensus 78 ~~~~~~~g~id~lv~~Ag 95 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAG 95 (278)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 0 136899887654
No 454
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=71.11 E-value=1.2 Score=37.69 Aligned_cols=42 Identities=26% Similarity=0.424 Sum_probs=28.7
Q ss_pred CCceeEEEecc----hhccCCh-h----hHHHHHHHHHhcCCCCcEEEEEe
Q 023288 228 TGRYDVIWVQW----CIGHLTD-D----DFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ~~~fD~Iv~~~----~l~~~~~-~----~~~~~l~~~~r~LkpGG~lii~e 269 (284)
-++||+|+++- -.||... + .+..+-....+.|+|||.+++.-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~a 259 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRA 259 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 37999999763 3444421 1 14455667789999999999863
No 455
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=70.34 E-value=8.6 Score=34.85 Aligned_cols=87 Identities=14% Similarity=-0.027 Sum_probs=50.5
Q ss_pred CCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
.+.+|+=+|+|. |......++....+|+++|.++.-...+... . . ...++.+.- ...|+|+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~--G-----------~--~v~~Leeal---~~ADIVi 280 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMD--G-----------F--RLVKLNEVI---RQVDIVI 280 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--T-----------C--EECCHHHHT---TTCSEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHc--C-----------C--EeccHHHHH---hcCCEEE
Confidence 577999999984 5544445544445799999998654444321 1 1 112222211 2579888
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.+..-.++- -.+..+.+|||++++-.
T Consensus 281 ~atgt~~lI-------~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 281 TCTGNKNVV-------TREHLDRMKNSCIVCNM 306 (435)
T ss_dssp ECSSCSCSB-------CHHHHHHSCTTEEEEEC
T ss_pred ECCCCcccC-------CHHHHHhcCCCcEEEEe
Confidence 752212211 12456678999987765
No 456
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=70.31 E-value=31 Score=31.34 Aligned_cols=100 Identities=18% Similarity=0.145 Sum_probs=55.2
Q ss_pred CceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCC-------CC-CCCCCC-CcceeEEEcCCCCCCC
Q 023288 158 HLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------EN-HMAPDM-HKATNFFCVPLQDFTP 226 (284)
Q Consensus 158 ~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~-------~~-~~~~~~-~~~~~~~~~d~~~~~~ 226 (284)
-.+|.=||+|. |. ++..++..+. +|+++|.+++.++.+++.... .+ ...... .....+ ..+...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~--- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE--- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---
Confidence 35788999996 33 3444444454 599999999988877653210 00 000000 011122 334322
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
-...|+||.+-. .. .+-...+++++...++||..++
T Consensus 112 -~~~aDlVIeaVp-e~--~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 112 -LSTVDLVVEAVF-ED--MNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp -GTTCSEEEECCC-SC--HHHHHHHHHHHHHHSCTTCEEE
T ss_pred -HCCCCEEEEcCC-CC--HHHHHHHHHHHHhhCCCCeEEE
Confidence 135798886543 11 1123578888999998876554
No 457
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=69.50 E-value=3.5 Score=35.22 Aligned_cols=52 Identities=27% Similarity=0.332 Sum_probs=32.2
Q ss_pred EcCCCCCCCCCCceeEEEecch----hcc-C--Ch-h-hHHHHHHHHHhcCCCCcEEEEEec
Q 023288 218 CVPLQDFTPETGRYDVIWVQWC----IGH-L--TD-D-DFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 218 ~~d~~~~~~~~~~fD~Iv~~~~----l~~-~--~~-~-~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.+|+.... ..+++|+|++... -|| - .| . -+.-++.-+..+|+|||.|++.-.
T Consensus 195 ~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 195 RLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred ccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 45555422 2267999997643 233 1 11 1 133367788899999999999743
No 458
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=69.05 E-value=11 Score=31.63 Aligned_cols=87 Identities=11% Similarity=0.007 Sum_probs=53.3
Q ss_pred ceEEEeeccc-c-HHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 159 LVALDCGSGI-G-RITKNLLIRYFN--EVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~--~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
.+|.=||||. | .++..+++.+.. +|+++|.++..++.+++.+. +.. ..+..+. . ...|+|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g------------i~~-~~~~~~~-~--~~aDvV 67 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG------------VHT-TQDNRQG-A--LNADVV 67 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC------------CEE-ESCHHHH-H--SSCSEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC------------CEE-eCChHHH-H--hcCCeE
Confidence 5688899983 2 344445555542 69999999998887776531 122 1121111 0 246888
Q ss_pred EecchhccCChhhHHHHHHHHHhc-CCCCcEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVG-LKPGGFFV 266 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~-LkpGG~li 266 (284)
+.+- ++.....+++++... ++++-.++
T Consensus 68 ilav-----~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 68 VLAV-----KPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp EECS-----CGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEEe-----CHHHHHHHHHHHHhhccCCCeEEE
Confidence 8754 334667888888887 77654433
No 459
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=68.69 E-value=17 Score=29.45 Aligned_cols=74 Identities=16% Similarity=0.069 Sum_probs=48.5
Q ss_pred CCCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------C
Q 023288 156 NQHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------P 226 (284)
Q Consensus 156 ~~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 226 (284)
.++.+||=.|++.|. ++..|++.+. +|++++.++..++...+.+. .++.+..+|+.+.. -
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~ 80 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK----------DNYTIEVCNLANKEECSNLIS 80 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----------SSEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc----------cCccEEEcCCCCHHHHHHHHH
Confidence 456788888876553 3344454555 59999999988887766653 24677888887632 1
Q ss_pred CCCceeEEEecchh
Q 023288 227 ETGRYDVIWVQWCI 240 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l 240 (284)
..+..|++|.+-..
T Consensus 81 ~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 81 KTSNLDILVCNAGI 94 (249)
T ss_dssp TCSCCSEEEECCC-
T ss_pred hcCCCCEEEECCCC
Confidence 12468999876543
No 460
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=68.41 E-value=17 Score=30.12 Aligned_cols=84 Identities=13% Similarity=0.029 Sum_probs=49.9
Q ss_pred eEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEec
Q 023288 160 VALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWVQ 237 (284)
Q Consensus 160 ~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~~ 237 (284)
+|.=||||. |. ++..+.. +. +|+++|.++..++...+.- +... +..+. -...|+|+.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g-------------~~~~--~~~~~---~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEF-------------GSEA--VPLER---VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHH-------------CCEE--CCGGG---GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCC-------------Cccc--CHHHH---HhCCCEEEEe
Confidence 577789984 43 3444444 44 5999999988877766541 1111 11111 1357988865
Q ss_pred chhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 238 WCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 238 ~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
-.-. .....+++.+...++||..++.
T Consensus 63 v~~~----~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 63 LPTT----REVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp CSSH----HHHHHHHHHHTTTCCTTEEEEE
T ss_pred CCCh----HHHHHHHHHHHhhCCCCCEEEE
Confidence 4321 1245677778888888776554
No 461
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=68.06 E-value=10 Score=42.13 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=64.8
Q ss_pred CCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-----C-C
Q 023288 155 NNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-----T-P 226 (284)
Q Consensus 155 ~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~-~ 226 (284)
..++.+||=.|+ |.|..+..+++....+|++++.+++-.+.+++.+...+. . .++...-.++ . .
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga------~--~v~~~~~~~~~~~i~~~t 1736 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDE------T--CFANSRDTSFEQHVLRHT 1736 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCS------T--TEEESSSSHHHHHHHHTT
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCc------e--EEecCCCHHHHHHHHHhc
Confidence 567889999874 678888888877666899999999999999886532111 0 0111110000 0 1
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
....+|+|+-+.. . ..+....+.|+|||+++..
T Consensus 1737 ~g~GvDvVld~~g-------~--~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1737 AGKGVDLVLNSLA-------E--EKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp TSCCEEEEEECCC-------H--HHHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECCC-------c--hHHHHHHHhcCCCcEEEEe
Confidence 1236999986432 2 4688889999999998875
No 462
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=67.93 E-value=15 Score=30.62 Aligned_cols=104 Identities=19% Similarity=0.162 Sum_probs=57.1
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHH-HHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSH-FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~-~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (284)
+.++|=.|++.|. ++..|++.+. +|++++.++. ..+...+.+... ..++.++.+|+.+.. +.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKN-------GSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHh-------CCCeEEEEcCCCCHHHHHHHHHH
Confidence 4567777765542 2333444455 5999887754 233332222211 234678888887632 00
Q ss_pred ----CCceeEEEecchhcc------CChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023288 228 ----TGRYDVIWVQWCIGH------LTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 228 ----~~~fD~Iv~~~~l~~------~~~~~~~~-----------~l~~~~r~LkpGG~lii~e 269 (284)
-+..|++|.+-.... ++.+++.. +++.+.+.++.+|.+++.-
T Consensus 101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 136899987654322 23333322 3456667777788888763
No 463
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=67.60 E-value=15 Score=30.08 Aligned_cols=71 Identities=13% Similarity=0.007 Sum_probs=43.7
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (284)
+.+||=.|++.|. ++..|++.+. +|++++.++..++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 73 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAYA 73 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHHHHHH
Confidence 4577877765442 3344444555 5999999987766554433 134677888887632 00
Q ss_pred ---CCceeEEEecch
Q 023288 228 ---TGRYDVIWVQWC 239 (284)
Q Consensus 228 ---~~~fD~Iv~~~~ 239 (284)
-+..|++|.+-.
T Consensus 74 ~~~~g~iD~lv~nAg 88 (254)
T 1hdc_A 74 REEFGSVDGLVNNAG 88 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 136899987654
No 464
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=67.59 E-value=11 Score=36.85 Aligned_cols=93 Identities=16% Similarity=0.093 Sum_probs=56.3
Q ss_pred cCCCCceEEEeec--cccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC------
Q 023288 154 RNNQHLVALDCGS--GIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT------ 225 (284)
Q Consensus 154 ~~~~~~~VLDiGc--GtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 225 (284)
...++.+||=.|+ |.|..+..+++....+|++++.++ -.+ ... .+ .. .++...-.++.
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~----~l~-lg-------a~-~v~~~~~~~~~~~i~~~ 407 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQ----AVE-LS-------RE-HLASSRTCDFEQQFLGA 407 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG----GSC-SC-------GG-GEECSSSSTHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh----hhh-cC-------hh-heeecCChhHHHHHHHH
Confidence 4678899999994 688899988887666799998554 111 111 11 00 11111101110
Q ss_pred CCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 226 PETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
.....+|+|+-+.. . ..+....+.|+|||+++..-
T Consensus 408 t~g~GvDvVld~~g-------g--~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 408 TGGRGVDVVLNSLA-------G--EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp SCSSCCSEEEECCC-------T--TTTHHHHTSCTTCEEEEECC
T ss_pred cCCCCeEEEEECCC-------c--HHHHHHHHHhcCCCEEEEec
Confidence 11246999996432 1 34577889999999998863
No 465
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=67.55 E-value=9 Score=31.99 Aligned_cols=104 Identities=16% Similarity=0.109 Sum_probs=63.4
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC--------
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------- 225 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------- 225 (284)
+++.+|=-|++.|. .+..|++.+. +|..+|.+++.++...+.+... ..++.++.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~-------g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRK-------GYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHT-------TCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHH
Confidence 45667777766653 3444555565 5999999999888776665432 235677788887632
Q ss_pred --CCCCceeEEEecch------hccCChhhHHHH-----------HHHHHhcC---CCCcEEEEE
Q 023288 226 --PETGRYDVIWVQWC------IGHLTDDDFVSF-----------FKRAKVGL---KPGGFFVLK 268 (284)
Q Consensus 226 --~~~~~fD~Iv~~~~------l~~~~~~~~~~~-----------l~~~~r~L---kpGG~lii~ 268 (284)
-.-++.|+++.+-. +..++.+++... .+.+...+ +.+|.++..
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVni 144 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI 144 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 11257899986543 334455544332 23444545 356877765
No 466
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=67.43 E-value=36 Score=28.05 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=44.7
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-----C--
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP-----E-- 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-- 227 (284)
+.+||=.|++.|. ++..|++.+. +|++++.++.-++...+.+...+. ..++.++.+|+.+... .
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGY-----PGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCC-----CceEEEEEecCCCHHHHHHHHHHH
Confidence 4567777765442 2333444454 599999998777665544432111 1346778889876420 0
Q ss_pred ---CCceeEEEecch
Q 023288 228 ---TGRYDVIWVQWC 239 (284)
Q Consensus 228 ---~~~fD~Iv~~~~ 239 (284)
-+.+|+||.+..
T Consensus 106 ~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 106 RSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHCCCSEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 136899986654
No 467
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=67.15 E-value=9.5 Score=34.81 Aligned_cols=66 Identities=9% Similarity=0.116 Sum_probs=44.7
Q ss_pred CceEEEeeccccHHHHHHHHhCC---CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCc
Q 023288 158 HLVALDCGSGIGRITKNLLIRYF---NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~~~---~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 230 (284)
.++|+=+||| ..+..+++... ..|+.+|.+++.++.+.+.+. +..+++|..+.. ..-..
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~------------~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD------------LRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS------------CEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC------------cEEEEEcCCCHHHHHhcCCCc
Confidence 4677777765 55555655432 279999999999998877652 457788887643 12246
Q ss_pred eeEEEec
Q 023288 231 YDVIWVQ 237 (284)
Q Consensus 231 fD~Iv~~ 237 (284)
.|++++.
T Consensus 69 ad~~ia~ 75 (461)
T 4g65_A 69 ADMLVAV 75 (461)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 8888753
No 468
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=66.78 E-value=6.4 Score=34.66 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=52.3
Q ss_pred CceEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEE
Q 023288 158 HLVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIW 235 (284)
Q Consensus 158 ~~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv 235 (284)
..+|.=||+|. | .++..+++.++ +|+++|.++..++.+.+. +. . ...+..++.......|+|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~----g~---------~-~~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE----GI---------A-GARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----TC---------B-CCSSHHHHHHHSCSSCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----CC---------E-EeCCHHHHHhcCCCCCEEE
Confidence 35788899873 3 23444454554 599999999887766543 11 0 0111111100012348888
Q ss_pred ecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 236 VQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 236 ~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
.+-. ......++..+...|+||..++-
T Consensus 87 ~~vp-----~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 87 LMVP-----AAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp ECSC-----GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred EeCC-----HHHHHHHHHHHHhhCCCCCEEEe
Confidence 6543 22455788889999998876553
No 469
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=66.53 E-value=51 Score=27.18 Aligned_cols=70 Identities=17% Similarity=0.097 Sum_probs=42.5
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCH--HHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~--~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~ 226 (284)
+++.+|==|++.|. .+..|++.+. +|..+|.+. +..+..++. ..++.++.+|+.+.. .
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~-----------g~~~~~~~~Dv~d~~~v~~~~ 75 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKD-----------GGNASALLIDFADPLAAKDSF 75 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHT-----------TCCEEEEECCTTSTTTTTTSS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHh-----------CCcEEEEEccCCCHHHHHHHH
Confidence 35566766766663 3444555555 499898874 333333332 234678888887643 3
Q ss_pred CCCceeEEEecc
Q 023288 227 ETGRYDVIWVQW 238 (284)
Q Consensus 227 ~~~~fD~Iv~~~ 238 (284)
..+..|+.+.+-
T Consensus 76 ~~g~iDiLVNNA 87 (247)
T 4hp8_A 76 TDAGFDILVNNA 87 (247)
T ss_dssp TTTCCCEEEECC
T ss_pred HhCCCCEEEECC
Confidence 456899998653
No 470
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=65.91 E-value=16 Score=30.61 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=54.5
Q ss_pred ceEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCC---------CCCCCCC---CcceeEEEcCCCCC
Q 023288 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPE---------NHMAPDM---HKATNFFCVPLQDF 224 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~---------~~~~~~~---~~~~~~~~~d~~~~ 224 (284)
.+|.=||+|+ | .++..++..+. +|+++|.+++.++.+++.+... +...... ..++.+ ..++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4677888884 2 23344444555 6999999999998887652110 0000000 001222 2232211
Q ss_pred CCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEE
Q 023288 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFV 266 (284)
Q Consensus 225 ~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~li 266 (284)
-...|+|+.+-.-. .+....+++++...++|+..++
T Consensus 83 ---~~~aDlVi~av~~~---~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVPES---LDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCCSC---HHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEeccCc---HHHHHHHHHHHHhhCCCCcEEE
Confidence 13579888654311 1134578889999999887543
No 471
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=64.95 E-value=8.7 Score=32.82 Aligned_cols=100 Identities=15% Similarity=0.031 Sum_probs=51.3
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|+=||+|. |. ++..|.+.+. +|+.++-++ .+..++. |+..........+....+...+.....+|+|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~--~~~i~~~----g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vil 75 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRD--YEAIAGN----GLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLV 75 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTT--HHHHHHT----CEEEEETTCCEEESCCCEESCHHHHCCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCc--HHHHHhC----CCEEEcCCCeEEEeeceeecCHHHcCCCCEEEE
Confidence 4688889983 33 3444444444 599999886 3444432 110000000011100000000001136899887
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
+---+. ...+++.+...++|+..++..-|
T Consensus 76 avk~~~-----~~~~l~~l~~~l~~~~~iv~l~n 104 (312)
T 3hn2_A 76 GLKTFA-----NSRYEELIRPLVEEGTQILTLQN 104 (312)
T ss_dssp CCCGGG-----GGGHHHHHGGGCCTTCEEEECCS
T ss_pred ecCCCC-----cHHHHHHHHhhcCCCCEEEEecC
Confidence 654333 33688899999999887776544
No 472
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=64.01 E-value=13 Score=31.89 Aligned_cols=99 Identities=10% Similarity=-0.004 Sum_probs=53.6
Q ss_pred CCceEEEeeccc-c-HHHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeE
Q 023288 157 QHLVALDCGSGI-G-RITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDV 233 (284)
Q Consensus 157 ~~~~VLDiGcGt-G-~~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 233 (284)
+..+|.=||+|. | .++..++..+. .+++.+|++++....+.+..... ..++... .|..++ ...|+
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~-------~~~i~~t-~d~~~l----~~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN-------LPNVEIS-KDLSAS----AHSKV 80 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT-------CTTEEEE-SCGGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc-------CCCeEEe-CCHHHH----CCCCE
Confidence 446799999995 3 24444555554 37999999986433443332110 1234332 444332 35799
Q ss_pred EEecchh------------ccCChhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 234 IWVQWCI------------GHLTDDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 234 Iv~~~~l------------~~~~~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+..... ..++ -...+++.+.+.. |++++++.-|
T Consensus 81 Vi~aag~~~pG~tR~dl~~~n~~--i~~~i~~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 81 VIFTVNSLGSSQSYLDVVQSNVD--MFRALVPALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp EEECCCC----CCHHHHHHHHHH--HHHHHHHHHHHHT-TTCEEEECSS
T ss_pred EEEcCCCCCCCCCHHHHHHHHHH--HHHHHHHHHHHhC-CCeEEEEcCC
Confidence 8876421 1111 2456777777775 9999888655
No 473
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=63.96 E-value=15 Score=30.39 Aligned_cols=104 Identities=18% Similarity=0.110 Sum_probs=59.9
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEE-eCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLL-EPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gv-D~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~ 227 (284)
.+.++|=.|++.|. ++..|++.+.. |+.+ ..++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAA-------GGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHH
Confidence 34678877876653 44555556664 7776 44555555544443221 235778889988742 00
Q ss_pred -----CCceeEEEecchhc------cCChhhHH-----------HHHHHHHhcCCCCcEEEEE
Q 023288 228 -----TGRYDVIWVQWCIG------HLTDDDFV-----------SFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 228 -----~~~fD~Iv~~~~l~------~~~~~~~~-----------~~l~~~~r~LkpGG~lii~ 268 (284)
-+..|++|.+-.+. ..+.+++. .+++.+...++++|.+++.
T Consensus 98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 160 (267)
T 3u5t_A 98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINM 160 (267)
T ss_dssp HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEE
Confidence 14789998765432 23333332 2455666777778888775
No 474
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=63.86 E-value=42 Score=26.66 Aligned_cols=69 Identities=10% Similarity=-0.015 Sum_probs=44.1
Q ss_pred eEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-------CCCC
Q 023288 160 VALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-------PETG 229 (284)
Q Consensus 160 ~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~ 229 (284)
+||=.|++.|. ++..|++.+. +|++++.++..++...+.+. .++.++.+|+.+.. .-..
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLS----------NNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCS----------SCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHh----------hccCeEeecCCCHHHHHHHHHHHhh
Confidence 46666766553 3444555565 49999999988887766552 34678888887642 1113
Q ss_pred ceeEEEecch
Q 023288 230 RYDVIWVQWC 239 (284)
Q Consensus 230 ~fD~Iv~~~~ 239 (284)
.+|+++.+..
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 4588886644
No 475
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=63.79 E-value=49 Score=26.33 Aligned_cols=70 Identities=21% Similarity=0.203 Sum_probs=42.2
Q ss_pred CCceEEEeeccccHHHHH----HHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C-
Q 023288 157 QHLVALDCGSGIGRITKN----LLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P- 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~----l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~- 226 (284)
++.+||=.|++ |.++.. |++.+. +|++++.++..++...+... .++++.+|+.+.. +
T Consensus 6 ~~~~vlVTGas-ggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~~~~~~~ 72 (244)
T 1cyd_A 6 SGLRALVTGAG-KGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECP-----------GIEPVCVDLGDWDATEKALG 72 (244)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHST-----------TCEEEECCTTCHHHHHHHHT
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcc-----------CCCcEEecCCCHHHHHHHHH
Confidence 34578877764 444333 344454 59999999877665544321 2456678887632 1
Q ss_pred CCCceeEEEecch
Q 023288 227 ETGRYDVIWVQWC 239 (284)
Q Consensus 227 ~~~~fD~Iv~~~~ 239 (284)
.-+.+|+|+.+..
T Consensus 73 ~~~~id~vi~~Ag 85 (244)
T 1cyd_A 73 GIGPVDLLVNNAA 85 (244)
T ss_dssp TCCCCSEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 1246899987654
No 476
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=63.62 E-value=9.6 Score=33.82 Aligned_cols=94 Identities=20% Similarity=0.199 Sum_probs=57.3
Q ss_pred CCceEEEeeccccHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 157 QHLVALDCGSGIGRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+.+||.++-+.|.++..+. .. .+++.+.-|-......+.+ |+ ...+ .......+..||+|+.
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~l~~~----~~-------~~~~----~~~~~~~~~~~d~v~~ 107 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE-GR-MAVERLETSRAAFRCLTAS----GL-------QARL----ALPWEAAAGAYDLVVL 107 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB-TT-BEEEEEECBHHHHHHHHHT----TC-------CCEE----CCGGGSCTTCEEEEEE
T ss_pred hCCcEEEecCCCCccccccC-CC-CceEEEeCcHHHHHHHHHc----CC-------Cccc----cCCccCCcCCCCEEEE
Confidence 34689999999998776553 22 2577776565554443332 21 1111 1112223468999886
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
...=+- ....+...|.++.+.|+|||.+++.
T Consensus 108 ~~Pk~k-~~~~~~~~l~~~~~~l~~g~~i~~~ 138 (381)
T 3dmg_A 108 ALPAGR-GTAYVQASLVAAARALRMGGRLYLA 138 (381)
T ss_dssp ECCGGG-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcch-hHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 554210 0124678899999999999998876
No 477
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=63.35 E-value=15 Score=33.56 Aligned_cols=88 Identities=17% Similarity=0.026 Sum_probs=50.8
Q ss_pred CCCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 156 NQHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 156 ~~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
-.+.+|+=+|+|. |......++....+|+++|+++.....+... + .++ .++.+.- ...|+|
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~----G---------~~v--v~LeElL---~~ADIV 306 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMD----G---------FEV--VTLDDAA---STADIV 306 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT----T---------CEE--CCHHHHG---GGCSEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhc----C---------cee--ccHHHHH---hhCCEE
Confidence 3577899999884 5555545545455899999998654443321 1 111 2222211 257888
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
+....-.|+ +-.+....+|||++|+-+
T Consensus 307 v~atgt~~l-------I~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 307 VTTTGNKDV-------ITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp EECCSSSSS-------BCHHHHHHSCTTEEEEEC
T ss_pred EECCCCccc-------cCHHHHhcCCCCeEEEEc
Confidence 864322222 114466678999988764
No 478
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=61.12 E-value=15 Score=30.31 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCceEEEeeccccHHHHHHHH----hCCCcEEEEeCC---HHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 157 QHLVALDCGSGIGRITKNLLI----RYFNEVDLLEPV---SHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 157 ~~~~VLDiGcGtG~~s~~l~~----~~~~~v~gvD~S---~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
.+.++|=.|++.| ++..++. .+. +|+.++.+ ...++...+.+... ..++.++.+|+.+..
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQ-------GAKVALYQSDLSNEEEVAK 80 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTT-------TCEEEEEECCCCSHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhc-------CCcEEEEECCCCCHHHHHH
Confidence 3567787776655 4444444 333 58887654 34444444444332 245788899998742
Q ss_pred -CC-----CCceeEEEecchh------ccCChhhHHH-----------HHHHHHhcCCCCcEEEEE
Q 023288 226 -PE-----TGRYDVIWVQWCI------GHLTDDDFVS-----------FFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 226 -~~-----~~~fD~Iv~~~~l------~~~~~~~~~~-----------~l~~~~r~LkpGG~lii~ 268 (284)
+. -+..|++|.+-.+ ...+.+++.. +.+.+...++++|.+++.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 10 1478999866442 2334343332 344555666678887775
No 479
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=60.96 E-value=30 Score=28.56 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=54.3
Q ss_pred CceEEEeecc-ccHHHHHH----HHhCCCcEEEEeCCHH---HHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 158 HLVALDCGSG-IGRITKNL----LIRYFNEVDLLEPVSH---FLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 158 ~~~VLDiGcG-tG~~s~~l----~~~~~~~v~gvD~S~~---~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
+.+||=.|++ +|.++..+ ++.+. +|++++.++. .++..++.. ..+.++.+|+.+..
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQEL-----------NSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-----------CCcEEEEcCCCCHHHHHH
Confidence 4578888865 13333333 33444 6999998775 233222221 12567888887642
Q ss_pred -C-----CCCceeEEEecchhc----------cCChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023288 226 -P-----ETGRYDVIWVQWCIG----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 -~-----~~~~fD~Iv~~~~l~----------~~~~~~~~~-----------~l~~~~r~LkpGG~lii~e 269 (284)
+ .-+..|++|.+-.+. ..+.+++.. +++.+...++++|.+++.-
T Consensus 74 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp HHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 0 014689998765432 233333332 3345556666678777653
No 480
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=60.47 E-value=53 Score=27.69 Aligned_cols=104 Identities=11% Similarity=0.042 Sum_probs=52.2
Q ss_pred CCceEEEeeccc-cH-HHHHHHHhCC-CcEEEEeCCHHHHHH-HHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCCCce
Q 023288 157 QHLVALDCGSGI-GR-ITKNLLIRYF-NEVDLLEPVSHFLDA-ARESLAPENHMAPDMHKATNFFCV-PLQDFTPETGRY 231 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~-~s~~l~~~~~-~~v~gvD~S~~~l~~-ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~f 231 (284)
+..+|.=||+|. |. ++..++..+. .+|+.+|.++..++. +.+......+ .....+... +...+ ..+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~----~~a 76 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-----YPTVSIDGSDDPEIC----RDA 76 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-----STTCEEEEESCGGGG----TTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhh-----cCCeEEEeCCCHHHh----CCC
Confidence 346899999974 33 2333333333 279999999876652 2211100000 011222222 32221 358
Q ss_pred eEEEecchhccCCh-----------hhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 232 DVIWVQWCIGHLTD-----------DDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 232 D~Iv~~~~l~~~~~-----------~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
|+|+..--....+. +-...+++.+... .|++.+++.-|
T Consensus 77 D~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~N 125 (319)
T 1lld_A 77 DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITN 125 (319)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecC
Confidence 99987653222221 1123566667664 78888877544
No 481
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=60.14 E-value=68 Score=27.12 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=50.8
Q ss_pred eEEEeecccc-H-HHHHHHHhCC-CcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 160 VALDCGSGIG-R-ITKNLLIRYF-NEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 160 ~VLDiGcGtG-~-~s~~l~~~~~-~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
+|.=+|+|.= . ++..++..+. .+|+.+|+++..++.....+..... ......+...+.+.+ ...|+|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~----~~~~~~i~~~~~~a~----~~aDvVIi 73 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP----VSHGTRVWHGGHSEL----ADAQVVIL 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC----TTSCCEEEEECGGGG----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh----hcCCeEEEECCHHHh----CCCCEEEE
Confidence 5677888632 2 2222333333 2799999998866542222222110 012233332333221 24788887
Q ss_pred cchhccCC-----------hhhHHHHHHHHHhcCCCCcEEEEEec
Q 023288 237 QWCIGHLT-----------DDDFVSFFKRAKVGLKPGGFFVLKEN 270 (284)
Q Consensus 237 ~~~l~~~~-----------~~~~~~~l~~~~r~LkpGG~lii~e~ 270 (284)
.-.....+ -+-...+++.+.+. .|++++++.-|
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tN 117 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSN 117 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSS
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence 64221110 01135666777776 69999887544
No 482
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=59.32 E-value=52 Score=27.11 Aligned_cols=72 Identities=11% Similarity=-0.070 Sum_probs=44.3
Q ss_pred CCceEEEeecc----ccH-HHHHHHHhCCCcEEEEeCCH--HHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----
Q 023288 157 QHLVALDCGSG----IGR-ITKNLLIRYFNEVDLLEPVS--HFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT---- 225 (284)
Q Consensus 157 ~~~~VLDiGcG----tG~-~s~~l~~~~~~~v~gvD~S~--~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~---- 225 (284)
++.+||=.|++ .|. ++..|++.+. +|+.++.+. ..++...+.. .++.++.+|+.+..
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~-----------~~~~~~~~Dl~~~~~v~~ 92 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEF-----------NPAAVLPCDVISDQEIKD 92 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGG-----------CCSEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhc-----------CCceEEEeecCCHHHHHH
Confidence 45678888843 443 4555565565 599999887 4444443332 23678889988742
Q ss_pred -C-----CCCceeEEEecchh
Q 023288 226 -P-----ETGRYDVIWVQWCI 240 (284)
Q Consensus 226 -~-----~~~~fD~Iv~~~~l 240 (284)
+ .-++.|++|.+..+
T Consensus 93 ~~~~~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHHHHHCSSCCEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCcc
Confidence 0 01468999976544
No 483
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=59.11 E-value=16 Score=33.18 Aligned_cols=41 Identities=22% Similarity=0.065 Sum_probs=28.0
Q ss_pred CCceEEEeeccc-cHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Q 023288 157 QHLVALDCGSGI-GRITKNLLIRYFNEVDLLEPVSHFLDAAR 197 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~~s~~l~~~~~~~v~gvD~S~~~l~~ar 197 (284)
.+.+|.=+|+|. |......+.....+|+++|+++.....+.
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~ 251 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA 251 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH
Confidence 567899898874 44444445454457999999987655554
No 484
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=58.94 E-value=36 Score=29.13 Aligned_cols=89 Identities=12% Similarity=-0.027 Sum_probs=57.5
Q ss_pred CceEEEeeccccHHHHHHHHh---CCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC----CCCCc
Q 023288 158 HLVALDCGSGIGRITKNLLIR---YFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT----PETGR 230 (284)
Q Consensus 158 ~~~VLDiGcGtG~~s~~l~~~---~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 230 (284)
..+|+=+|+ |..+..+++. ... |+++|.+++.++ +++. ...++.+|..+.. ..-..
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~-------------~~~~i~gd~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRS-------------GANFVHGDPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHT-------------TCEEEESCTTSHHHHHHTCSTT
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhC-------------CcEEEEeCCCCHHHHHhcChhh
Confidence 457877776 6677666643 233 999999999888 6542 2567888887642 22347
Q ss_pred eeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 231 YDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 231 fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
.|.|++... +++..-......+.+.|...++..
T Consensus 178 a~~vi~~~~-----~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 178 ARAVIVDLE-----SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp EEEEEECCS-----SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred ccEEEEcCC-----ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 898887532 233334555667778888776664
No 485
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=58.61 E-value=41 Score=27.56 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=57.9
Q ss_pred CCceEEEeec-cccHHHHH----HHHhCCCcEEEEeCCHHH-HHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----
Q 023288 157 QHLVALDCGS-GIGRITKN----LLIRYFNEVDLLEPVSHF-LDAARESLAPENHMAPDMHKATNFFCVPLQDFT----- 225 (284)
Q Consensus 157 ~~~~VLDiGc-GtG~~s~~----l~~~~~~~v~gvD~S~~~-l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 225 (284)
.+.++|=.|+ |+|.++.. |++.+. +|++++.++.- ++...+.. ..++.++.+|+.+..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~ 74 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLASL 74 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhc----------CCCceEEEccCCCHHHHHHH
Confidence 3467888887 24444433 343454 59999987643 34433322 124667888887642
Q ss_pred CC-----CC---ceeEEEecchhc-----------cCChhhHHH-----------HHHHHHhcCCCCcEEEEEe
Q 023288 226 PE-----TG---RYDVIWVQWCIG-----------HLTDDDFVS-----------FFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 226 ~~-----~~---~fD~Iv~~~~l~-----------~~~~~~~~~-----------~l~~~~r~LkpGG~lii~e 269 (284)
+. -+ ..|++|.+-... ..+.+++.. +.+.+...++++|.+++.-
T Consensus 75 ~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 75 AGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 00 02 789998765432 233333332 3455566667778877763
No 486
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=58.22 E-value=14 Score=30.78 Aligned_cols=75 Identities=16% Similarity=0.064 Sum_probs=47.2
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCC-------
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTP------- 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 226 (284)
.+.++|=.|++.|. ++..|++.+. +|+++|.++..++...+.+... ..++.++.+|+.+...
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIAS-------GGTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHT-------TCCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCeEEEEEecCCCHHHHHHHHHH
Confidence 45678877766553 3444454555 5999999887666655544321 2457888899887530
Q ss_pred --CCCceeEEEecch
Q 023288 227 --ETGRYDVIWVQWC 239 (284)
Q Consensus 227 --~~~~fD~Iv~~~~ 239 (284)
..+..|++|.+-.
T Consensus 104 ~~~~g~iD~lvnnAg 118 (275)
T 4imr_A 104 AEAIAPVDILVINAS 118 (275)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 0146899986644
No 487
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=58.17 E-value=13 Score=31.30 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=50.0
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|.=||||. |. ++..+...+. +|+++|.++..++..++. + +.. ..+..+. . ...|+|+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~----g---------~~~-~~~~~~~-~--~~~D~vi~ 67 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAA----G---------AET-ASTAKAI-A--EQCDVIIT 67 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----T---------CEE-CSSHHHH-H--HHCSEEEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC----C---------Cee-cCCHHHH-H--hCCCEEEE
Confidence 4788899984 33 3344444444 699999999888776553 1 111 1111110 0 24788886
Q ss_pred cchhccCChhhHHHHH---HHHHhcCCCCcEEEE
Q 023288 237 QWCIGHLTDDDFVSFF---KRAKVGLKPGGFFVL 267 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l---~~~~r~LkpGG~lii 267 (284)
+-.- +.....++ +.+...++||..++.
T Consensus 68 ~v~~----~~~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 68 MLPN----SPHVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp CCSS----HHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred ECCC----HHHHHHHHhCcchHhhcCCCCCEEEE
Confidence 5431 12344566 567778888876543
No 488
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=57.96 E-value=35 Score=30.88 Aligned_cols=104 Identities=10% Similarity=0.032 Sum_probs=53.0
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCC--C-----CcceeEEEcCCCCCCCCCC
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPD--M-----HKATNFFCVPLQDFTPETG 229 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~--~-----~~~~~~~~~d~~~~~~~~~ 229 (284)
++|.=||+|. |. ++..+++.+. +|+++|.++.-++..++........... . ..++.+ ..|..+. -.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea---~~ 77 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA---VP 77 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH---GG
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH---Hh
Confidence 4677788873 33 2333443444 6999999999888877632110000000 0 011222 1222110 12
Q ss_pred ceeEEEecchhcc-----CChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 230 RYDVIWVQWCIGH-----LTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 230 ~fD~Iv~~~~l~~-----~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
..|+|+.+-.-.. ..-.....+++.+...|++|-.++.
T Consensus 78 ~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~ 120 (450)
T 3gg2_A 78 EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVT 120 (450)
T ss_dssp GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEE
Confidence 4688876532110 0001466788889999988755443
No 489
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=57.96 E-value=43 Score=28.51 Aligned_cols=85 Identities=14% Similarity=-0.056 Sum_probs=47.4
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCH-------HHHHHHHHHcCCCCCCCCCCCcceeEEEc-CCCCCCCCC
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVS-------HFLDAARESLAPENHMAPDMHKATNFFCV-PLQDFTPET 228 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~-------~~l~~ar~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~ 228 (284)
.+|.=||+|. |. ++..+++.+..+|+++|.++ ..++.+.+. + + .. +..+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~----g---------~---~~~s~~e~~--- 85 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL----G---------V---EPLDDVAGI--- 85 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT----T---------C---EEESSGGGG---
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC----C---------C---CCCCHHHHH---
Confidence 4688899883 33 33444444414699999997 344433321 1 1 22 332211
Q ss_pred CceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 229 GRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 229 ~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
...|+|+.+-. +......+..+...|+||..++-
T Consensus 86 ~~aDvVi~avp-----~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 86 ACADVVLSLVV-----GAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp GGCSEEEECCC-----GGGHHHHHHHHGGGCCTTCEEEE
T ss_pred hcCCEEEEecC-----CHHHHHHHHHHHhhcCCCCEEEE
Confidence 24688876543 23344566788888888765543
No 490
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=57.94 E-value=15 Score=31.87 Aligned_cols=94 Identities=16% Similarity=0.045 Sum_probs=56.8
Q ss_pred CCCCceEEEeecc-ccHHHHHHHHhC-CCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcC------CCCCCC
Q 023288 155 NNQHLVALDCGSG-IGRITKNLLIRY-FNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVP------LQDFTP 226 (284)
Q Consensus 155 ~~~~~~VLDiGcG-tG~~s~~l~~~~-~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d------~~~~~~ 226 (284)
..++.+||=+|+| .|..+..+++.. ..+|+++|.|+.-++.+++.-.. .++... +.++.
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~------------~vi~~~~~~~~~v~~~~- 250 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD------------HVVDARRDPVKQVMELT- 250 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS------------EEEETTSCHHHHHHHHT-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCC------------EEEeccchHHHHHHHHh-
Confidence 5678899999986 456666666654 44799999999999998754221 111111 00111
Q ss_pred CCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEEe
Q 023288 227 ETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLKE 269 (284)
Q Consensus 227 ~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~e 269 (284)
....+|+|+-+-.- .-...+..+.+. +||++++.-
T Consensus 251 ~g~g~Dvvid~~G~------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 251 RGRGVNVAMDFVGS------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp TTCCEEEEEESSCC------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCCCCcEEEECCCC------chHHHHHHHhhc--CCCEEEEEe
Confidence 11269999854331 100155556666 999988864
No 491
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=57.65 E-value=31 Score=28.15 Aligned_cols=74 Identities=14% Similarity=0.093 Sum_probs=49.4
Q ss_pred CceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC--
Q 023288 158 HLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE-- 227 (284)
Q Consensus 158 ~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 227 (284)
+.++|=.|++.|. ++..|++.+. +|+.+|.++..++.+.+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQF-------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCS-------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 4577777766553 3444554555 5999999999888887776543 245788889998742 00
Q ss_pred ---CCceeEEEecch
Q 023288 228 ---TGRYDVIWVQWC 239 (284)
Q Consensus 228 ---~~~fD~Iv~~~~ 239 (284)
-+..|++|.+-.
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 136899986643
No 492
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=57.57 E-value=21 Score=28.88 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=49.1
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----CC-
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----PE- 227 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~- 227 (284)
.+.+||=.|++.|. ++..|++.+. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVAD-------GGTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 35678878876552 3444555555 5999999998887776655332 245778889988742 00
Q ss_pred ----CCceeEEEecch
Q 023288 228 ----TGRYDVIWVQWC 239 (284)
Q Consensus 228 ----~~~fD~Iv~~~~ 239 (284)
-+..|++|.+-.
T Consensus 80 ~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136899987654
No 493
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=57.18 E-value=23 Score=30.50 Aligned_cols=101 Identities=11% Similarity=-0.051 Sum_probs=55.2
Q ss_pred ceEEEeeccc-c-HHHHHHHHhC------CCcEEEEeCCHH-----HHHHHHHHcCCCCCC-CCCCCcceeEEEcCCCCC
Q 023288 159 LVALDCGSGI-G-RITKNLLIRY------FNEVDLLEPVSH-----FLDAARESLAPENHM-APDMHKATNFFCVPLQDF 224 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~------~~~v~gvD~S~~-----~l~~ar~~~~~~~~~-~~~~~~~~~~~~~d~~~~ 224 (284)
.+|.=||+|. | .++..+++.+ ..+|+++|.++. .++..++........ ......++.+ ..+..+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 87 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPDVVQA 87 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESSHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcCHHHH
Confidence 5799999984 3 3344455455 036999999887 666655432111000 0000111221 1222110
Q ss_pred CCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEEE
Q 023288 225 TPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVLK 268 (284)
Q Consensus 225 ~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii~ 268 (284)
-...|+|+.+-. ......+++.+...++|+..++..
T Consensus 88 ---~~~aD~Vilav~-----~~~~~~v~~~i~~~l~~~~ivv~~ 123 (354)
T 1x0v_A 88 ---AEDADILIFVVP-----HQFIGKICDQLKGHLKANATGISL 123 (354)
T ss_dssp ---HTTCSEEEECCC-----GGGHHHHHHHHTTCSCTTCEEEEC
T ss_pred ---HcCCCEEEEeCC-----HHHHHHHHHHHHhhCCCCCEEEEE
Confidence 125798887643 335668889999899888765543
No 494
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=57.08 E-value=23 Score=29.41 Aligned_cols=74 Identities=19% Similarity=0.119 Sum_probs=49.9
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCC-----C--
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFT-----P-- 226 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-- 226 (284)
+++.+|=-|++.|. .+..|++.+. +|..+|.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~-------g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGM-------GKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHH
Confidence 45677777776664 3444555555 5999999999888877766443 245778899998642 0
Q ss_pred ---CCCceeEEEecc
Q 023288 227 ---ETGRYDVIWVQW 238 (284)
Q Consensus 227 ---~~~~fD~Iv~~~ 238 (284)
.-++.|+++.+-
T Consensus 78 ~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 78 TFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 115789988654
No 495
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=56.88 E-value=11 Score=31.90 Aligned_cols=86 Identities=15% Similarity=0.107 Sum_probs=51.3
Q ss_pred ceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|.=||+|. |. ++..+++.+. +|+++|.++..++.+.+.- +.+ ..+..+.. . .|+|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g-------------~~~-~~~~~~~~---~-aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAG-------------ATL-ADSVADVA---A-ADLIHI 76 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTT-------------CEE-CSSHHHHT---T-SSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCC-------------CEE-cCCHHHHH---h-CCEEEE
Confidence 4788899884 33 3333443444 5999999998777665531 111 12222211 2 688876
Q ss_pred cchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 237 QWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+-.- +.....+++.+...++||..++-
T Consensus 77 ~vp~----~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 77 TVLD----DAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp CCSS----HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ECCC----hHHHHHHHHHHHHhcCCCCEEEE
Confidence 5431 22456778888888988876554
No 496
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=56.22 E-value=18 Score=30.93 Aligned_cols=89 Identities=10% Similarity=0.078 Sum_probs=50.8
Q ss_pred CCceEEEeeccc-cH-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEE
Q 023288 157 QHLVALDCGSGI-GR-ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVI 234 (284)
Q Consensus 157 ~~~~VLDiGcGt-G~-~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I 234 (284)
...+|.=||+|. |. ++..+++.+. +|+++|.+++-++...+. + +.+ ..+..+.. ...|+|
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~----g---------~~~-~~~~~e~~---~~aDvV 91 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAAL----G---------ATI-HEQARAAA---RDADIV 91 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT----T---------CEE-ESSHHHHH---TTCSEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------CEe-eCCHHHHH---hcCCEE
Confidence 346899999983 43 3444454555 599999999877766543 1 111 12222111 246888
Q ss_pred EecchhccCChhhHHHHHH--HHHhcCCCCcEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFK--RAKVGLKPGGFFVL 267 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~--~~~r~LkpGG~lii 267 (284)
+.+-.- +.....++. .+...++||..++-
T Consensus 92 i~~vp~----~~~~~~v~~~~~~~~~l~~~~~vi~ 122 (320)
T 4dll_A 92 VSMLEN----GAVVQDVLFAQGVAAAMKPGSLFLD 122 (320)
T ss_dssp EECCSS----HHHHHHHHTTTCHHHHCCTTCEEEE
T ss_pred EEECCC----HHHHHHHHcchhHHhhCCCCCEEEe
Confidence 765431 223445555 66677888776554
No 497
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=55.68 E-value=28 Score=28.96 Aligned_cols=77 Identities=22% Similarity=0.150 Sum_probs=50.0
Q ss_pred CCceEEEeeccccH---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCC-C-------
Q 023288 157 QHLVALDCGSGIGR---ITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDF-T------- 225 (284)
Q Consensus 157 ~~~~VLDiGcGtG~---~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~-~------- 225 (284)
.+.+||=.|++.|. ++..|++.+. +|++++.++.-++.+.+.+...+ ..++.++.+|+.+. .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTTSCHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCCCcHHHHHHHHH
Confidence 45678877876553 3444554555 69999999887777666554321 24688899999885 2
Q ss_pred -C--CCCceeEEEecchh
Q 023288 226 -P--ETGRYDVIWVQWCI 240 (284)
Q Consensus 226 -~--~~~~fD~Iv~~~~l 240 (284)
. .-+..|++|.+-.+
T Consensus 84 ~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 0 01478999977654
No 498
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=55.38 E-value=18 Score=31.24 Aligned_cols=103 Identities=14% Similarity=0.039 Sum_probs=57.1
Q ss_pred CCceEEEeecccc--HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCC-------CCCCCCCCC-----cceeEEEcCCC
Q 023288 157 QHLVALDCGSGIG--RITKNLLIRYFNEVDLLEPVSHFLDAARESLAP-------ENHMAPDMH-----KATNFFCVPLQ 222 (284)
Q Consensus 157 ~~~~VLDiGcGtG--~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~-------~~~~~~~~~-----~~~~~~~~d~~ 222 (284)
...+|.=||+|+= .++..++..++. |+.+|++++.++.+.+++.. .+....... .++.+ ..|+.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 3467999999952 234445556665 99999999998887665421 111000000 11222 12222
Q ss_pred CCCCCCCceeEEEecchhccCChhhHHHHHHHHHhcCCCCcEEEE
Q 023288 223 DFTPETGRYDVIWVQWCIGHLTDDDFVSFFKRAKVGLKPGGFFVL 267 (284)
Q Consensus 223 ~~~~~~~~fD~Iv~~~~l~~~~~~~~~~~l~~~~r~LkpGG~lii 267 (284)
+. . ...|+|+=+ +.+.+. --.++++++.++++|+-.|.-
T Consensus 83 ~a-~--~~ad~ViEa-v~E~l~--iK~~lf~~l~~~~~~~aIlaS 121 (319)
T 3ado_A 83 EA-V--EGVVHIQEC-VPENLD--LKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp HH-T--TTEEEEEEC-CCSCHH--HHHHHHHHHHTTCCSSSEEEE
T ss_pred hH-h--ccCcEEeec-cccHHH--HHHHHHHHHHHHhhhcceeeh
Confidence 10 1 246777632 223222 246899999999999876544
No 499
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=55.13 E-value=18 Score=30.43 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=50.4
Q ss_pred ceEEEeeccc-c-HHHHHHHHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCCCCceeEEEe
Q 023288 159 LVALDCGSGI-G-RITKNLLIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPETGRYDVIWV 236 (284)
Q Consensus 159 ~~VLDiGcGt-G-~~s~~l~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~Iv~ 236 (284)
.+|.=||||. | .++..+++.+. +|+++|.++..++.+.+. + +.. ..+..+.. ...|+|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~----g---------~~~-~~~~~~~~---~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAA----G---------ASA-ARSARDAV---QGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHT----T---------CEE-CSSHHHHH---TTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHC----C---------CeE-cCCHHHHH---hCCCeEEE
Confidence 4688899984 3 34444554555 699999999888877654 1 111 11111110 24688876
Q ss_pred cchhccCChhhHHHHHH---HHHhcCCCCcEEEE
Q 023288 237 QWCIGHLTDDDFVSFFK---RAKVGLKPGGFFVL 267 (284)
Q Consensus 237 ~~~l~~~~~~~~~~~l~---~~~r~LkpGG~lii 267 (284)
+-. .+.....++. .+...++||..++-
T Consensus 66 ~vp----~~~~~~~v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 66 MLP----ASQHVEGLYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp CCS----CHHHHHHHHHSSSCGGGSSCSSCEEEE
T ss_pred ECC----CHHHHHHHHcCchhHHhcCCCCcEEEE
Confidence 542 1224456666 67777888775543
No 500
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=55.02 E-value=56 Score=25.31 Aligned_cols=93 Identities=15% Similarity=0.087 Sum_probs=50.1
Q ss_pred eEEEeeccccHHHHHH----HHhCCCcEEEEeCCHHHHHHHHHHcCCCCCCCCCCCcceeEEEcCCCCCCCC-CCceeEE
Q 023288 160 VALDCGSGIGRITKNL----LIRYFNEVDLLEPVSHFLDAARESLAPENHMAPDMHKATNFFCVPLQDFTPE-TGRYDVI 234 (284)
Q Consensus 160 ~VLDiGcGtG~~s~~l----~~~~~~~v~gvD~S~~~l~~ar~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~I 234 (284)
+||=.|+ +|.++..+ ++++. +|++++-++..++... .+++++.+|+.+.... -..+|+|
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~--------------~~~~~~~~D~~d~~~~~~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH--------------KDINILQKDIFDLTLSDLSDQNVV 65 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC--------------SSSEEEECCGGGCCHHHHTTCSEE
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc--------------CCCeEEeccccChhhhhhcCCCEE
Confidence 5676664 44444434 33444 6999999876654331 2367888888764310 1358999
Q ss_pred EecchhccCChhhHHHHHHHHHhcCCC--CcEEEEE
Q 023288 235 WVQWCIGHLTDDDFVSFFKRAKVGLKP--GGFFVLK 268 (284)
Q Consensus 235 v~~~~l~~~~~~~~~~~l~~~~r~Lkp--GG~lii~ 268 (284)
|.+.....-.........+++.+.++. .+.+++.
T Consensus 66 i~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 66 VDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp EECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred EECCcCCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 876544221111122334444444443 3566654
Done!