BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 023289
         (284 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|357468567|ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|355505623|gb|AES86765.1| 40S ribosomal protein S4 [Medicago truncatula]
          Length = 264

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/235 (93%), Positives = 231/235 (98%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL++IEEARKRQAAQ
Sbjct: 205 FETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARKRQAAQ 259


>gi|356559288|ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/237 (92%), Positives = 231/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|255647667|gb|ACU24295.1| unknown [Glycine max]
          Length = 264

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 219/237 (92%), Positives = 231/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|224087813|ref|XP_002308235.1| predicted protein [Populus trichocarpa]
 gi|222854211|gb|EEE91758.1| predicted protein [Populus trichocarpa]
          Length = 263

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEARKRQAA   A
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEARKRQAASQTA 262


>gi|356551387|ref|XP_003544057.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/237 (92%), Positives = 231/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+KLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTVKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|297736557|emb|CBI25428.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+ VDGKVRTDKTYP+
Sbjct: 7   GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRTDKTYPS 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 67  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 127 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGT 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPKGKGIKLSIIEEA+KR AAQAA+
Sbjct: 187 FETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAAQAAS 244


>gi|225448546|ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+ VDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHIFVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQDA GHEFATRLGNVF IGKG+KPWVSLPKGKGIKLSIIEEA+KR AAQAA+
Sbjct: 205 FETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAAQAAS 262


>gi|449465358|ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
 gi|449496881|ref|XP_004160252.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/236 (93%), Positives = 230/236 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+PA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAK+KLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           FETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR A+QA
Sbjct: 205 FETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQA 260


>gi|351725821|ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max]
 gi|22138108|gb|AAM93434.1| 40S ribosomal S4 protein [Glycine max]
 gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/237 (92%), Positives = 231/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QD+ GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|449465362|ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
 gi|449496878|ref|XP_004160251.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/237 (92%), Positives = 231/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT+PA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAK+KLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIHIQDA GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKLSIIEEARKR A+QAA
Sbjct: 205 FETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA 261


>gi|255549228|ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
 gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4, putative [Ricinus communis]
          Length = 263

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/239 (92%), Positives = 231/239 (96%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQAAA 284
           FETIH+QDA GHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR  AAQA A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAAQAVA 263


>gi|192912988|gb|ACF06602.1| 40S ribosomal protein S4 [Elaeis guineensis]
          Length = 265

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/238 (92%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVIAILMQRHV+VDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NT+DG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLEANKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDALGHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA  AA
Sbjct: 205 FETIHLQDALGHEFATRIGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAASGAA 262


>gi|449509213|ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/237 (92%), Positives = 230/237 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q+A
Sbjct: 205 FETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSA 261


>gi|297745843|emb|CBI15899.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 7   GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 67  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREK KGS
Sbjct: 127 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKRKGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPKGKGIKLSIIEEA+KR AAQAA+
Sbjct: 187 FETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEEAQKRLAAQAAS 244


>gi|356496247|ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
          Length = 264

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/235 (93%), Positives = 229/235 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           FETIH+QDA GHEFATR+GNVF IGKG+KPWVSLPKGKGIKLSIIEEARKR AAQ
Sbjct: 205 FETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ 259


>gi|225434482|ref|XP_002275063.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREK KGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKRKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVF IGKG+KPWV+LPKGKGIKLSIIEEA+KR AAQAA+
Sbjct: 205 FETIHVQDATGHEFATRLGNVFIIGKGTKPWVTLPKGKGIKLSIIEEAQKRLAAQAAS 262


>gi|255648349|gb|ACU24626.1| unknown [Glycine max]
          Length = 264

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/237 (91%), Positives = 229/237 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD VSIPKTNENF LLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDAVSIPKTNENFHLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|73759787|dbj|BAE20168.1| ribosomal protein S4 [Panax ginseng]
          Length = 264

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/238 (92%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREV +ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVQSILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPYINTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLEANKIADFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FET+HIQD+LGHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR  AQ+A 
Sbjct: 205 FETVHIQDSLGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRNVAQSAT 262


>gi|255543308|ref|XP_002512717.1| 40S ribosomal protein S4, putative [Ricinus communis]
 gi|223548678|gb|EEF50169.1| 40S ribosomal protein S4, putative [Ricinus communis]
          Length = 263

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/238 (92%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKIT+FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA   A
Sbjct: 205 FETIHIQDSTGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAASQTA 262


>gi|192912992|gb|ACF06604.1| 40S ribosomal protein S4 [Elaeis guineensis]
          Length = 265

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/238 (92%), Positives = 228/238 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFG KGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGHKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE  KI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLETYKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEARKR AA  AA
Sbjct: 205 FETIHLQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAASGAA 262


>gi|224125756|ref|XP_002329710.1| predicted protein [Populus trichocarpa]
 gi|222870618|gb|EEF07749.1| predicted protein [Populus trichocarpa]
          Length = 263

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 218/237 (91%), Positives = 229/237 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AA  A
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRLAASQA 261


>gi|225439460|ref|XP_002268192.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/238 (90%), Positives = 231/238 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKV+ VQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVKGVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+KLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IK+REKHKG+
Sbjct: 145 RTIRYPDPLIKANDTVKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKSREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPKGKGIKLSIIEEA+KR AAQA+A
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEEAKKRLAAQASA 262


>gi|224139252|ref|XP_002323021.1| predicted protein [Populus trichocarpa]
 gi|222867651|gb|EEF04782.1| predicted protein [Populus trichocarpa]
          Length = 262

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/238 (91%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEA+KR AA  AA
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEAKKRLAASQAA 262


>gi|363806782|ref|NP_001242281.1| uncharacterized protein LOC100812132 [Glycine max]
 gi|255645121|gb|ACU23059.1| unknown [Glycine max]
          Length = 264

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/237 (91%), Positives = 229/237 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLK ALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKCALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+ D+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVIDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDTIKLDLEENKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH+QDA GHEFATR+GNVFTIGKG+KPW+SLPKGKGIKLSIIEEARKR AAQ A
Sbjct: 205 FETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPKGKGIKLSIIEEARKRIAAQQA 261


>gi|82400118|gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
          Length = 264

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL++++RNRLKYALTYREVI+ILMQR V+VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKL+IIEEA+KR AAQ+A 
Sbjct: 205 FETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEEAKKRLAAQSAT 262


>gi|1173257|sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4
 gi|457803|emb|CAA54095.1| ribosomal protein S4 [Solanum tuberosum]
          Length = 264

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL++++RNRLKYALTYREVI+ILMQR V+VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREVISILMQRQVMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEE+KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FET+HIQD+ GHEFATRLGNVFT+GKG+KPWVSLPKGKGIKL+IIE+ARKR AAQ+A 
Sbjct: 205 FETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAAQSAT 262


>gi|79327186|ref|NP_001031846.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
 gi|332003725|gb|AED91108.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
          Length = 244

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 7   GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 67  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 127 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 187 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 244


>gi|9759565|dbj|BAB11167.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
          Length = 263

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 26  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 86  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 146 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 206 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 263


>gi|18415395|ref|NP_568179.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
 gi|20143904|sp|P49204.4|RS42_ARATH RecName: Full=40S ribosomal protein S4-2
 gi|7546687|emb|CAB87265.1| ribosomal protein S4 [Arabidopsis thaliana]
 gi|15292999|gb|AAK93610.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
 gi|17979543|gb|AAL50106.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
 gi|19310835|gb|AAL85148.1| putative 40S ribosomal protein S4 [Arabidopsis thaliana]
 gi|20147251|gb|AAM10339.1| AT5g07090/T28J14_30 [Arabidopsis thaliana]
 gi|21537414|gb|AAM61755.1| 40S ribosomal protein S4 [Arabidopsis thaliana]
 gi|332003724|gb|AED91107.1| 40S ribosomal protein S4-2 [Arabidopsis thaliana]
          Length = 262

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/238 (89%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 205 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 262


>gi|118484853|gb|ABK94293.1| unknown [Populus trichocarpa]
          Length = 263

 Score =  455 bits (1171), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 216/238 (90%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALT REV+AILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREVLAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEA+KR AA  AA
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEAKKRLAASQAA 262


>gi|224122992|ref|XP_002318967.1| predicted protein [Populus trichocarpa]
 gi|222857343|gb|EEE94890.1| predicted protein [Populus trichocarpa]
          Length = 262

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/238 (90%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALT REV+AILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTGREVLAILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLRD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLENNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKLSIIEEA+KR AA  AA
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWISLPKGKGIKLSIIEEAKKRLAASQAA 262


>gi|118480993|gb|ABK92450.1| unknown [Populus trichocarpa]
          Length = 263

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/238 (90%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKF VGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFGVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKGSKPW+SLPKGKGIKLSIIEEA++R AA  AA
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGSKPWISLPKGKGIKLSIIEEAKERLAASQAA 262


>gi|10177019|dbj|BAB10257.1| ribosomal protein S4 [Arabidopsis thaliana]
          Length = 244

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/238 (89%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 7   GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 67  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 127 RTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 187 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 244


>gi|297806729|ref|XP_002871248.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
 gi|297317085|gb|EFH47507.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/238 (88%), Positives = 230/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIP++NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPFLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+KLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTVKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNVFTIGKG+KPW+SLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 205 FETIHIQDSTGHEFATRLGNVFTIGKGTKPWMSLPKGKGIKLTIIEEARKRLASQQAA 262


>gi|15237195|ref|NP_200650.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
 gi|115311859|sp|Q8VYK6.2|RS43_ARATH RecName: Full=40S ribosomal protein S4-3
 gi|16226259|gb|AAL16117.1|AF428285_1 AT5g58420/mqj2_10 [Arabidopsis thaliana]
 gi|21592333|gb|AAM64284.1| ribosomal protein S4-like [Arabidopsis thaliana]
 gi|332009668|gb|AED97051.1| 40S ribosomal protein S4-3 [Arabidopsis thaliana]
          Length = 262

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/238 (89%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 205 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 262


>gi|18398393|ref|NP_565414.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
 gi|75163156|sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1
 gi|13877537|gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana]
 gi|14334916|gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana]
 gi|17104537|gb|AAL34157.1| putative ribosomal protein S4 [Arabidopsis thaliana]
 gi|17978689|gb|AAL47338.1| unknown protein [Arabidopsis thaliana]
 gi|21536498|gb|AAM60830.1| putative ribosomal protein S4 [Arabidopsis thaliana]
 gi|330251522|gb|AEC06616.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
          Length = 261

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/237 (89%), Positives = 229/237 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR +AQ A
Sbjct: 205 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLSAQQA 261


>gi|297832340|ref|XP_002884052.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
 gi|297329892|gb|EFH60311.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
          Length = 261

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/237 (89%), Positives = 229/237 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIP++NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPFLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR +AQ A
Sbjct: 205 FETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLSAQQA 261


>gi|224135847|ref|XP_002322175.1| predicted protein [Populus trichocarpa]
 gi|222869171|gb|EEF06302.1| predicted protein [Populus trichocarpa]
          Length = 263

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/238 (90%), Positives = 227/238 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHV VDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVFVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHSLR++EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSLREDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE  KI D+IKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLENYKIVDYIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEEA+KR AA   A
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEAKKRLAASQNA 262


>gi|297793379|ref|XP_002864574.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
 gi|297310409|gb|EFH40833.1| 40S ribosomal protein S4 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/238 (89%), Positives = 227/238 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEA+FKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAQFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A Q  A
Sbjct: 205 FETIHIQDSTGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAGQQVA 262


>gi|17979233|gb|AAL49933.1| AT5g58420/mqj2_10 [Arabidopsis thaliana]
 gi|23505827|gb|AAN28773.1| At5g58420/mqj2_10 [Arabidopsis thaliana]
          Length = 262

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 211/238 (88%), Positives = 229/238 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRL+YALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLEYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q AA
Sbjct: 205 FETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQQAA 262


>gi|346470359|gb|AEO35024.1| hypothetical protein [Amblyomma maculatum]
          Length = 265

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/231 (92%), Positives = 225/231 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRN+LKYALTYREVIAILMQRHV+VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNKLKYALTYREVIAILMQRHVMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDTIKLDLE NKITDFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIRANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGI L+IIEEARKR
Sbjct: 205 FETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIMLTIIEEARKR 255


>gi|357506135|ref|XP_003623356.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|355498371|gb|AES79574.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|388496326|gb|AFK36229.1| unknown [Medicago truncatula]
          Length = 265

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/231 (91%), Positives = 225/231 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE+NKITDFIKFDVGN+VMVTGGRNRGRVG IKNR+KH G+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLEQNKITDFIKFDVGNVVMVTGGRNRGRVGFIKNRKKHMGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FETIH+QDA GHEFATRLGNVFTIG+G KPWVSLPKG+GIKL++IEEARKR
Sbjct: 205 FETIHVQDAAGHEFATRLGNVFTIGRGPKPWVSLPKGRGIKLTVIEEARKR 255


>gi|1173256|sp|P46299.1|RS4_GOSHI RecName: Full=40S ribosomal protein S4
 gi|488739|emb|CAA55882.1| ribosomal protein, small subunit 4e (RS4e) [Gossypium hirsutum]
          Length = 262

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/238 (90%), Positives = 226/238 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHV+VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPK KGIKLSIIEEARKR AAQ AA
Sbjct: 205 FETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKRLAAQNAA 262


>gi|257815610|gb|ACV70143.1| putative 40S ribosomal protein S4 [Jatropha curcas]
          Length = 264

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/227 (93%), Positives = 219/227 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRL YALTYREVIAILMQRHVLV GKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLPYALTYREVIAILMQRHVLVVGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           FETIHIQDA G EFATRLGNVFTIGKG+KPWVS PKGKGIKLSIIEE
Sbjct: 205 FETIHIQDATGPEFATRLGNVFTIGKGTKPWVSFPKGKGIKLSIIEE 251


>gi|3914899|sp|O22424.1|RS4_MAIZE RecName: Full=40S ribosomal protein S4
 gi|2331301|gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
 gi|194698488|gb|ACF83328.1| unknown [Zea mays]
 gi|195618184|gb|ACG30922.1| 40S ribosomal protein S4 [Zea mays]
 gi|195625650|gb|ACG34655.1| 40S ribosomal protein S4 [Zea mays]
 gi|413932477|gb|AFW67028.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 265

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/232 (89%), Positives = 224/232 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 FETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|242032315|ref|XP_002463552.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
 gi|241917406|gb|EER90550.1| hypothetical protein SORBIDRAFT_01g001850 [Sorghum bicolor]
          Length = 264

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/232 (89%), Positives = 224/232 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 FETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|242052937|ref|XP_002455614.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
 gi|241927589|gb|EES00734.1| hypothetical protein SORBIDRAFT_03g014380 [Sorghum bicolor]
          Length = 265

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/232 (89%), Positives = 223/232 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++DALGH FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 FETIHVEDALGHAFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|222631333|gb|EEE63465.1| hypothetical protein OsJ_18278 [Oryza sativa Japonica Group]
          Length = 398

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/237 (87%), Positives = 224/237 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPA
Sbjct: 160 GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPA 219

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP++NT DG
Sbjct: 220 GFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDG 279

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+REKHKGS
Sbjct: 280 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGS 339

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH++DALGH+FATR+GNVFTIGK  KPWVSLPKGKGIKLSIIEEARKR A  AA
Sbjct: 340 FETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 396


>gi|357483185|ref|XP_003611879.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|357516021|ref|XP_003628299.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|217074206|gb|ACJ85463.1| unknown [Medicago truncatula]
 gi|355513214|gb|AES94837.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|355522321|gb|AET02775.1| 40S ribosomal protein S4 [Medicago truncatula]
 gi|388493800|gb|AFK34966.1| unknown [Medicago truncatula]
 gi|388509492|gb|AFK42812.1| unknown [Medicago truncatula]
          Length = 265

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/227 (91%), Positives = 222/227 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNE+FRLLYDTKGRFRLHS+RD+EAKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNESFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I+ANDTIKLDLEENKI DFIKFDVGN+VMVTGG+NRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGKNRGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           FETIH+QDA GHEFATRL NVFTIGKG+KPWVSLPKGKGIKL++IEE
Sbjct: 205 FETIHVQDATGHEFATRLVNVFTIGKGTKPWVSLPKGKGIKLTVIEE 251


>gi|47777385|gb|AAT38019.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
          Length = 245

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/237 (87%), Positives = 224/237 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPA
Sbjct: 7   GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP++NT DG
Sbjct: 67  GFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+REKHKGS
Sbjct: 127 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH++DALGH+FATR+GNVFTIGK  KPWVSLPKGKGIKLSIIEEARKR A  AA
Sbjct: 187 FETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 243


>gi|115463485|ref|NP_001055342.1| Os05g0368300 [Oryza sativa Japonica Group]
 gi|113578893|dbj|BAF17256.1| Os05g0368300 [Oryza sativa Japonica Group]
          Length = 263

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/237 (87%), Positives = 224/237 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP++NT DG
Sbjct: 85  GFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGNIVMVTGGRN GRVG+IK+REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH++DALGH+FATR+GNVFTIGK  KPWVSLPKGKGIKLSIIEEARKR A  AA
Sbjct: 205 FETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 261


>gi|242087691|ref|XP_002439678.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
 gi|241944963|gb|EES18108.1| hypothetical protein SORBIDRAFT_09g018320 [Sorghum bicolor]
          Length = 263

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/237 (86%), Positives = 225/237 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQR V+VDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRLVMVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKT ENFRLLYDTKGRFRLHS+RD+EAKFK+CKVRSVQFGQKGIP++NTYDG
Sbjct: 85  GFMDVVSIPKTGENFRLLYDTKGRFRLHSIRDDEAKFKMCKVRSVQFGQKGIPFLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IK+REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKSREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH++D+LGH+FATR+GNVFTIGK  KPWVSLPKGKGIKLSIIEEARKR A  AA
Sbjct: 205 FETIHVEDSLGHQFATRMGNVFTIGKDKKPWVSLPKGKGIKLSIIEEARKRNAEAAA 261


>gi|115436514|ref|NP_001043015.1| Os01g0358400 [Oryza sativa Japonica Group]
 gi|53791616|dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|113532546|dbj|BAF04929.1| Os01g0358400 [Oryza sativa Japonica Group]
 gi|125525886|gb|EAY74000.1| hypothetical protein OsI_01884 [Oryza sativa Indica Group]
 gi|125570348|gb|EAZ11863.1| hypothetical protein OsJ_01737 [Oryza sativa Japonica Group]
 gi|149391309|gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa Indica Group]
 gi|215692713|dbj|BAG88133.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 265

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/232 (89%), Positives = 222/232 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++DALGH FATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 FETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|115443689|ref|NP_001045624.1| Os02g0105900 [Oryza sativa Japonica Group]
 gi|109940160|sp|P49398.3|RS4_ORYSJ RecName: Full=40S ribosomal protein S4; AltName: Full=SCAR protein
           SS620
 gi|313103631|pdb|3IZ6|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|50252099|dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|113535155|dbj|BAF07538.1| Os02g0105900 [Oryza sativa Japonica Group]
 gi|125537716|gb|EAY84111.1| hypothetical protein OsI_05494 [Oryza sativa Indica Group]
 gi|125580492|gb|EAZ21423.1| hypothetical protein OsJ_05027 [Oryza sativa Japonica Group]
 gi|169244433|gb|ACA50490.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
 gi|215678909|dbj|BAG96339.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215734827|dbj|BAG95549.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|306415995|gb|ADM86872.1| 40S ribosomal protein S4 [Oryza sativa Japonica Group]
          Length = 265

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/232 (88%), Positives = 223/232 (96%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++DALGH+FATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 FETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|125552065|gb|EAY97774.1| hypothetical protein OsI_19685 [Oryza sativa Indica Group]
          Length = 279

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/237 (87%), Positives = 224/237 (94%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREVI+ILMQRHV+VDGKVRTDKTYPA
Sbjct: 41  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPA 100

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRLLYDTKGRFRLHS++DE+AKFKLCKVRSVQFGQKGIP++NT DG
Sbjct: 101 GFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDG 160

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IK+REKHKGS
Sbjct: 161 RTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKSREKHKGS 220

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FETIH++DALGH+FATR+GNVFTIGK  KPWVSLPKGKGIKLSIIEEARKR A  AA
Sbjct: 221 FETIHVEDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 277


>gi|44894458|gb|AAS48726.1| ribosomal protein S4 [Zea mays]
          Length = 265

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/232 (88%), Positives = 222/232 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKTNEN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGS
Sbjct: 145 RTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
            ETIH++D+LGH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR 
Sbjct: 205 LETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256


>gi|326500636|dbj|BAJ94984.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 265

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/232 (87%), Positives = 222/232 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQRH++VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRHIMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEE RKR 
Sbjct: 205 FETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 256


>gi|2345154|gb|AAB67831.1| ribsomal protein S4 [Zea mays]
 gi|194707820|gb|ACF87994.1| unknown [Zea mays]
 gi|195607094|gb|ACG25377.1| 40S ribosomal protein S4 [Zea mays]
 gi|195653033|gb|ACG45984.1| 40S ribosomal protein S4 [Zea mays]
 gi|414873848|tpg|DAA52405.1| TPA: ribosomal protein S4 [Zea mays]
          Length = 265

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/232 (86%), Positives = 221/232 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYAL YREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKT EN+RLLYDTKGRFRLH +RDE+AKFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG 
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           F+TIH++D++GH+FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE R+R 
Sbjct: 205 FDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRRRD 256


>gi|357134623|ref|XP_003568916.1| PREDICTED: 40S ribosomal protein S4-like [Brachypodium distachyon]
          Length = 265

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/231 (87%), Positives = 221/231 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQR +LVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRQILVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE++KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDSKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FETIH++DA GH+FATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEE RKR
Sbjct: 205 FETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 255


>gi|48596901|dbj|BAD22763.1| ribosomal protein [Bromus inermis]
          Length = 265

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/232 (86%), Positives = 221/232 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRNRLKYALTYREV +ILMQRH++VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNRLKYALTYREVQSILMQRHIMVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD++SIPKT EN+RLLYDTKGRFRLHS+RDE+AK+KLCKVRSVQFGQKGIPY+NT DG
Sbjct: 85  GFMDIISIPKTGENYRLLYDTKGRFRLHSVRDEDAKYKLCKVRSVQFGQKGIPYLNTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG+
Sbjct: 145 RTIRYPDPLIKANDTIKLDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGT 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FETIH++DA GH+FATRLGNVFTIGKG+KPWV+LPKGKGIKL+IIEE RKR 
Sbjct: 205 FETIHVEDAQGHQFATRLGNVFTIGKGTKPWVTLPKGKGIKLTIIEEQRKRD 256


>gi|17367482|sp|O81363.1|RS4_PRUAR RecName: Full=40S ribosomal protein S4
 gi|3264763|gb|AAC24585.1| 40S ribosomal protein S4 [Prunus armeniaca]
          Length = 261

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/231 (87%), Positives = 217/231 (93%), Gaps = 4/231 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREV++ILMQRH+LVDGK+     +  
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVVSILMQRHILVDGKIH----FCI 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
              DVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPYINTYDG
Sbjct: 81  RLSDVVSIPKTNENFRLLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGQKGIPYINTYDG 140

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGS
Sbjct: 141 RTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGS 200

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+I+EEA+KR
Sbjct: 201 FETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251


>gi|116779177|gb|ABK21170.1| unknown [Picea sitchensis]
 gi|116781965|gb|ABK22318.1| unknown [Picea sitchensis]
 gi|148909584|gb|ABR17884.1| unknown [Picea sitchensis]
          Length = 263

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/232 (83%), Positives = 214/232 (92%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK+KLCKVRSVQFG KGIPY+NTYDG
Sbjct: 85  GFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCKVRSVQFGDKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+KANDTIK+DLE  KI +FIKFDVGN+VMVTGGRNRGRVG+IK+REKHKGS
Sbjct: 145 RTIRYPDPLVKANDTIKIDLETGKIKEFIKFDVGNVVMVTGGRNRGRVGVIKHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEARKR 
Sbjct: 205 FEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEARKRH 256


>gi|116781974|gb|ABK22322.1| unknown [Picea sitchensis]
 gi|116782831|gb|ABK22679.1| unknown [Picea sitchensis]
 gi|224284198|gb|ACN39835.1| unknown [Picea sitchensis]
 gi|224285571|gb|ACN40504.1| unknown [Picea sitchensis]
 gi|224286248|gb|ACN40833.1| unknown [Picea sitchensis]
          Length = 263

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/232 (83%), Positives = 214/232 (92%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRFRLHS++DEEAK+KLCKVRSVQFG KGIPY+NTYDG
Sbjct: 85  GFMDVLSIAKTNENFRLLYDAKGRFRLHSIKDEEAKYKLCKVRSVQFGDKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+KANDTIK+DLE  KI +FIKFDVGN++MVTGGRNRGRVG+IK+REKHKGS
Sbjct: 145 RTIRYPDPLVKANDTIKVDLETGKIKEFIKFDVGNVIMVTGGRNRGRVGVIKHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           FE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEARKR 
Sbjct: 205 FEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEARKRH 256


>gi|167998342|ref|XP_001751877.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696975|gb|EDQ83312.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/239 (74%), Positives = 215/239 (89%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH++  EEAK+KLCKVRS QFG KG+P+I T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPHITTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFD+GNIVMVTGGRNRGR+G+I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQAAA 284
           F+ IH+ DA G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA +AAA
Sbjct: 205 FDIIHVTDATGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRGQALKAAA 263


>gi|168014621|ref|XP_001759850.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688980|gb|EDQ75354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/239 (74%), Positives = 215/239 (89%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH++  EEAK+KLCKVRS QFG KG+PYI T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPYITTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFD+GNIVMVTGGRNRGR+G+I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQAAA 284
           F+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA +A+A
Sbjct: 205 FDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRTQALKASA 263


>gi|168014095|ref|XP_001759591.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689130|gb|EDQ75503.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/239 (74%), Positives = 215/239 (89%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH++  EEAK+KLCKVRS QFG KG+P+I T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHNISAEEAKYKLCKVRSAQFGDKGVPHITTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFD+GNIVMVTGGRNRGR+G+I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQAAA 284
           F+ IH+ D+ G +FATR+GNVFT+G+G+KPW++LP+GKGIKLSI+EEA+KR QA +AAA
Sbjct: 205 FDIIHVTDSTGQQFATRMGNVFTVGQGTKPWITLPRGKGIKLSIVEEAKKRTQALKAAA 263


>gi|168057168|ref|XP_001780588.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667954|gb|EDQ54571.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 175/233 (75%), Positives = 211/233 (90%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH +  EEAK+KLCKVRS QFG KG+PYI T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRSAQFGDKGVPYITTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFD+GNIVMVTGGRNRGR+G+I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ IH+ D+ G++FATR+GNVFTIG+G+KPW++LP+GKGIKLSI+EEA+KR+A
Sbjct: 205 FDIIHVTDSTGNQFATRMGNVFTIGQGTKPWITLPRGKGIKLSIVEEAKKRKA 257


>gi|168066840|ref|XP_001785339.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663064|gb|EDQ49851.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 263

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/238 (73%), Positives = 213/238 (89%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH +  EEAK+KLCKVR+ QFG KG+P++ T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRAAQFGDKGVPHVTTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFD+GNIVMVTGGRNRGR+G+I +REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDIGNIVMVTGGRNRGRIGVIHHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ IH+ DA+G++FATR+GNVFTIG+G+KPW++LP+GKGIKLSI+EEA+KR+A +  A
Sbjct: 205 FDIIHVTDAIGNQFATRMGNVFTIGQGTKPWITLPRGKGIKLSIVEEAKKRKATEKQA 262


>gi|168027041|ref|XP_001766039.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682682|gb|EDQ69098.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 308

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/239 (74%), Positives = 213/239 (89%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREV+AI+MQR + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSPGPHKERECLPLVVMLRNRLKYALTYREVVAIVMQRLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF LH +  EEAK+KLCKVRS QFG KG+P+I T+DG
Sbjct: 85  GFMDVISIAKTNENFRLLYDNKGRFTLHHISAEEAKYKLCKVRSAQFGDKGVPHITTFDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K++LE  K+ +FIKFDVGNIVMVTGGRNRGR+G+I +REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTVKINLETGKVVEFIKFDVGNIVMVTGGRNRGRIGVIHHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA--QAA 283
           F+ IH+ DA G++FATR+GNV+TIG+G+KPW++LP+GKGIKLSI+EEA+KR+A   QAA
Sbjct: 205 FDIIHVTDATGNQFATRMGNVYTIGQGTKPWITLPRGKGIKLSIVEEAKKRKATLKQAA 263


>gi|302805125|ref|XP_002984314.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
 gi|300148163|gb|EFJ14824.1| hypothetical protein SELMODRAFT_271698 [Selaginella moellendorffii]
          Length = 258

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/231 (77%), Positives = 211/231 (91%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK RECLPL++VLRNRL YALTYREV+AI+MQ+ + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYREVVAIVMQKLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++ K +EN+RLLYD+KGRF LHS+  EEAKFKLCKVR+V+FG KGIP++ TYDG
Sbjct: 85  GFMDVLTVGKVDENYRLLYDSKGRFTLHSINSEEAKFKLCKVRAVRFGAKGIPFLTTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE  KI +FIKFDVGN+VMVTGGRNRGRVG I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNLVMVTGGRNRGRVGTIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           F+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPKGKGIKLSI+EEARKR
Sbjct: 205 FDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIKLSIVEEARKR 255


>gi|302781420|ref|XP_002972484.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
 gi|300159951|gb|EFJ26570.1| hypothetical protein SELMODRAFT_148442 [Selaginella moellendorffii]
          Length = 258

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/231 (77%), Positives = 211/231 (91%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK RECLPL++VLRNRL YALTYREV+AI+MQ+ + +DGKVRTDK YPA
Sbjct: 25  GAFAPKPSSGPHKERECLPLVIVLRNRLNYALTYREVVAIVMQKLISIDGKVRTDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++ K +EN+RLLYD+KGRF LHS+  EEAKFKLCKVR+V+FG KGIP++ TYDG
Sbjct: 85  GFMDVLTVGKVDENYRLLYDSKGRFTLHSINAEEAKFKLCKVRAVRFGAKGIPFLTTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIK+DLE  KI +FIKFDVGN+VMVTGGRNRGRVG I++REKHKGS
Sbjct: 145 RTIRYPDPLIKANDTIKIDLETGKIKEFIKFDVGNVVMVTGGRNRGRVGTIQHREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           F+ IHI+D++G +FATR+GNVFTIG+G+KPWVSLPKGKGIKLSI+EEARKR
Sbjct: 205 FDIIHIKDSVGQDFATRMGNVFTIGQGTKPWVSLPKGKGIKLSIVEEARKR 255


>gi|227206132|dbj|BAH57121.1| AT5G07090 [Arabidopsis thaliana]
          Length = 197

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/197 (90%), Positives = 191/197 (96%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRH+ VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCK
Sbjct: 1   MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VRS+QFGQKGIPY+NTYDGRTIRYPDPLIK NDTIKLDLEENKI +FIKFDVGN+VMVTG
Sbjct: 61  VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRNRGRVG+IKNREKHKGSFETIHIQD+ GHEFATRLGNV+TIGKG+KPWVSLPKGKGIK
Sbjct: 121 GRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIK 180

Query: 268 LSIIEEARKRQAAQAAA 284
           L+IIEEARKR A+Q AA
Sbjct: 181 LTIIEEARKRLASQQAA 197


>gi|297735624|emb|CBI18118.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  367 bits (941), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 181/238 (76%), Positives = 192/238 (80%), Gaps = 41/238 (17%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP+
Sbjct: 7   GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPS 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEEAKFKLCKV+ VQFGQKGIPY+NTYDG
Sbjct: 67  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVKGVQFGQKGIPYLNTYDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT                                         HKG+
Sbjct: 127 RTIRYPDPLIKANDT-----------------------------------------HKGT 145

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FETIH+QDA GHEFATRLGNVFTIGKG+KPWV+LPKGKGIKLSIIEEA+KR AAQA+A
Sbjct: 146 FETIHVQDATGHEFATRLGNVFTIGKGTKPWVTLPKGKGIKLSIIEEAKKRLAAQASA 203


>gi|351721738|ref|NP_001235428.1| uncharacterized protein LOC100500000 [Glycine max]
 gi|255628423|gb|ACU14556.1| unknown [Glycine max]
          Length = 205

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 170/181 (93%), Positives = 176/181 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+KFKLCKVRSVQFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESKFKLCKVRSVQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG 
Sbjct: 145 RTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGK 204

Query: 227 F 227
            
Sbjct: 205 L 205


>gi|384499638|gb|EIE90129.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
          Length = 262

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 164/228 (71%), Positives = 193/228 (84%)

Query: 46  LGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 105
           LG  APKPSSGPHK+RECLPLI+ +RNRLKYAL  REV +ILMQR V VDGKVRTD T+P
Sbjct: 24  LGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRTDSTFP 83

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V  G KG+PYI T+D
Sbjct: 84  AGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVMIGSKGVPYITTHD 143

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
           GRTIRYPDPLIK NDTI+ ++E  KI DF+KFDVGN+VMVTGGRN GRVG + +RE+H G
Sbjct: 144 GRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTGGRNIGRVGQLVHRERHIG 203

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
            FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPKGKG+KLSI EE
Sbjct: 204 GFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVKLSITEE 251


>gi|384487368|gb|EIE79548.1| 40S ribosomal protein S4-A [Rhizopus delemar RA 99-880]
          Length = 262

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 164/228 (71%), Positives = 193/228 (84%)

Query: 46  LGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 105
           LG  APKPSSGPHK+RECLPLI+ +RNRLKYAL  REV +ILMQR V VDGKVRTD T+P
Sbjct: 24  LGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRTDSTFP 83

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFMDV+S+ KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V  G KG+PYI T+D
Sbjct: 84  AGFMDVISVEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVMIGSKGVPYITTHD 143

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
           GRTIRYPDPLIK NDTI+ ++E  KI DF+KFDVGN+VMVTGGRN GRVG + +RE+H G
Sbjct: 144 GRTIRYPDPLIKTNDTIRFNIETGKIEDFVKFDVGNVVMVTGGRNIGRVGQLVHRERHIG 203

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
            FE +HI+DAL H FATR+ NVFTIG+G+KPW+SLPKGKG+KLSI EE
Sbjct: 204 GFEIVHIKDALDHVFATRISNVFTIGQGNKPWISLPKGKGVKLSITEE 251


>gi|384492812|gb|EIE83303.1| 40S ribosomal protein S4 [Rhizopus delemar RA 99-880]
          Length = 263

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 164/228 (71%), Positives = 192/228 (84%)

Query: 46  LGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 105
           LG  APKPSSGPHK+RECLPLI+ +RNRLKYAL  REV +ILMQR V VDGKVRTD T+P
Sbjct: 24  LGSYAPKPSSGPHKTRECLPLIVFIRNRLKYALNGREVQSILMQRLVKVDGKVRTDSTFP 83

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFMDV+SI KT ENFRL+YD KGRF +H + DEEAK+KLCKV+ V  G KG+PYI T+D
Sbjct: 84  AGFMDVISIEKTGENFRLVYDVKGRFAVHRITDEEAKYKLCKVKKVLIGSKGVPYITTHD 143

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
           GRTIRYPDPLIK NDT++ ++E  KI DF+KFDVGNIVMVTGGRN GRVG + +RE+H G
Sbjct: 144 GRTIRYPDPLIKTNDTVRFNIETGKIEDFVKFDVGNIVMVTGGRNIGRVGQLVHRERHIG 203

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
            FE +HI+DAL H FATR+ NVFTIG+G+K W+SLPKGKG+KLSI EE
Sbjct: 204 GFEIVHIKDALDHVFATRISNVFTIGQGNKSWISLPKGKGVKLSITEE 251


>gi|431912035|gb|ELK14176.1| Protein DBF4 like protein B [Pteropus alecto]
          Length = 980

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|344257932|gb|EGW14036.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 335

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 163/246 (66%), Positives = 201/246 (81%), Gaps = 4/246 (1%)

Query: 43  YNSLGLQ----APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKV 98
           Y++LG++    AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKV
Sbjct: 89  YSNLGVKDRKAAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKV 148

Query: 99  RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 158
           RTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGI
Sbjct: 149 RTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGI 208

Query: 159 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
           P++ T+D RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I 
Sbjct: 209 PHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVIT 268

Query: 219 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR 
Sbjct: 269 NRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRL 328

Query: 279 AAQAAA 284
           AA+ ++
Sbjct: 329 AAKQSS 334


>gi|213409335|ref|XP_002175438.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
 gi|213409962|ref|XP_002175751.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
 gi|212003485|gb|EEB09145.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
 gi|212003798|gb|EEB09458.1| 40S ribosomal protein S4 [Schizosaccharomyces japonicus yFS275]
          Length = 262

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 162/238 (68%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK+R+CLPLI+ LRNRLKYAL  REV AILMQR V VDGKVRTD T+PA
Sbjct: 25  GTYAPKPSPGPHKARDCLPLIVFLRNRLKYALNGREVKAILMQRLVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 85  GFMDVISIEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+KL+LE NKI  F+KFD  ++VMVTGGRN GRVG++ +RE+H+GS
Sbjct: 145 RTIRYPDPLIKVNDTVKLNLENNKIESFVKFDTSSMVMVTGGRNMGRVGVVTHRERHEGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE +HI+DAL  EFATRL NVF IG+  K W+SLPKGKG+KLSI EE  +R+A +  A
Sbjct: 205 FEIVHIKDALDREFATRLSNVFVIGEAGKAWISLPKGKGVKLSIAEERDRRRALKGLA 262


>gi|431914424|gb|ELK15681.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 245

 Score =  347 bits (890), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCKVRKIFVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 187 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 244


>gi|350539629|ref|NP_001233602.1| 40S ribosomal protein S4 [Cricetulus griseus]
 gi|1350996|sp|P47961.2|RS4_CRIGR RecName: Full=40S ribosomal protein S4
 gi|453574|dbj|BAA05485.1| ribosomal protein S4 [Cricetulus griseus]
          Length = 263

 Score =  347 bits (890), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|402910524|ref|XP_003917924.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Papio anubis]
 gi|12846200|dbj|BAB27070.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 187 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 244


>gi|74179765|dbj|BAE22507.1| unnamed protein product [Mus musculus]
          Length = 263

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|12851918|dbj|BAB29207.1| unnamed protein product [Mus musculus]
          Length = 263

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|431892606|gb|ELK03039.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 263

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KG+P++ T+D 
Sbjct: 85  GFMDVISIDKTEENFRLIYDTKGRFAVHRITSEEAKYKLCKVRKIFVGTKGVPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F +GKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVVGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|48376549|gb|AAH07308.2| RPS4X protein, partial [Homo sapiens]
          Length = 243

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 5   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 64

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 65  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 124

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 125 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 184

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 185 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 242


>gi|4506725|ref|NP_000998.1| 40S ribosomal protein S4, X isoform X isoform [Homo sapiens]
 gi|6677805|ref|NP_033120.1| 40S ribosomal protein S4, X isoform [Mus musculus]
 gi|56090273|ref|NP_001007601.1| 40S ribosomal protein S4, X isoform [Rattus norvegicus]
 gi|78369408|ref|NP_001030522.1| 40S ribosomal protein S4 [Bos taurus]
 gi|255653020|ref|NP_001157422.1| 40S ribosomal protein S4 [Equus caballus]
 gi|324021713|ref|NP_001191212.1| ribosomal protein S4 [Sus scrofa]
 gi|354725914|ref|NP_001238971.1| 40S ribosomal protein S4, X isoform [Canis lupus familiaris]
 gi|388453927|ref|NP_001252551.1| 40S ribosomal protein S4, X isoform [Macaca mulatta]
 gi|114689107|ref|XP_001139217.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Pan
           troglodytes]
 gi|291407689|ref|XP_002720153.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 2
           [Oryctolagus cuniculus]
 gi|293363046|ref|XP_002730304.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
           norvegicus]
 gi|296235756|ref|XP_002763034.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Callithrix jacchus]
 gi|332263743|ref|XP_003280912.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Nomascus
           leucogenys]
 gi|390479927|ref|XP_003735813.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Callithrix jacchus]
 gi|392343218|ref|XP_003754823.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Rattus
           norvegicus]
 gi|397467181|ref|XP_003805305.1| PREDICTED: 40S ribosomal protein S4, X isoform [Pan paniscus]
 gi|402910522|ref|XP_003917923.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Papio anubis]
 gi|410988822|ref|XP_004000676.1| PREDICTED: 40S ribosomal protein S4, X isoform [Felis catus]
 gi|426250215|ref|XP_004018833.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
 gi|426257226|ref|XP_004022233.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
 gi|426396382|ref|XP_004064423.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 1 [Gorilla
           gorilla gorilla]
 gi|426396384|ref|XP_004064424.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 2 [Gorilla
           gorilla gorilla]
 gi|426396386|ref|XP_004064425.1| PREDICTED: 40S ribosomal protein S4, X isoform isoform 3 [Gorilla
           gorilla gorilla]
 gi|50401474|sp|Q76MY1.3|RS4X_MACFU RecName: Full=40S ribosomal protein S4, X isoform
 gi|50401475|sp|Q76N24.3|RS4X_CERAE RecName: Full=40S ribosomal protein S4, X isoform
 gi|50403621|sp|P62703.2|RS4X_RAT RecName: Full=40S ribosomal protein S4, X isoform
 gi|50403628|sp|P62701.2|RS4X_HUMAN RecName: Full=40S ribosomal protein S4, X isoform; AltName:
           Full=SCR10; AltName: Full=Single copy abundant mRNA
           protein
 gi|50403629|sp|P62702.2|RS4X_MOUSE RecName: Full=40S ribosomal protein S4, X isoform
 gi|50403630|sp|P62704.2|RS4X_MESAU RecName: Full=40S ribosomal protein S4, X isoform
 gi|50403631|sp|P62705.2|RS4X_FELCA RecName: Full=40S ribosomal protein S4, X isoform
 gi|118572714|sp|P79103.3|RS4_BOVIN RecName: Full=40S ribosomal protein S4
 gi|1083572|pir||A55276 ribosomal protein S4 - western wild mouse
 gi|2148029|pir||I48169 ribosomal protein S4 - hamster (Mesocricetus sp.)
 gi|57135|emb|CAA32427.1| unnamed protein product [Rattus rattus]
 gi|200864|gb|AAA40075.1| ribosomal protein S4 [Mus musculus]
 gi|220321|dbj|BAA01858.1| ribosomal protein S4 [Mesocricetus sp.]
 gi|337510|gb|AAA63255.1| ribosomal protein S4X isoform [Homo sapiens]
 gi|2791861|gb|AAB96968.1| ribosomal protein s4 X isoform [Homo sapiens]
 gi|4115718|dbj|BAA36501.1| ribosomal protein S4X [Chlorocebus aethiops]
 gi|6519820|dbj|BAA87932.1| ribosomal protein S4X (RPS4X) [Macaca fuscata]
 gi|12653405|gb|AAH00472.1| Ribosomal protein S4, X-linked [Homo sapiens]
 gi|12832435|dbj|BAB22106.1| unnamed protein product [Mus musculus]
 gi|12846290|dbj|BAB27108.1| unnamed protein product [Mus musculus]
 gi|12846695|dbj|BAB27268.1| unnamed protein product [Mus musculus]
 gi|14318606|gb|AAH09100.1| Ribosomal protein S4, X-linked [Mus musculus]
 gi|26353416|dbj|BAC40338.1| unnamed protein product [Mus musculus]
 gi|48145587|emb|CAG33016.1| RPS4X [Homo sapiens]
 gi|48735278|gb|AAH71662.1| Ribosomal protein S4, X-linked [Homo sapiens]
 gi|55824731|gb|AAH86560.1| Ribosomal protein S4, X-linked [Rattus norvegicus]
 gi|71680222|gb|AAI00904.1| RPS4X protein [Homo sapiens]
 gi|71681664|gb|AAI00905.1| RPS4X protein [Homo sapiens]
 gi|74139944|dbj|BAE31810.1| unnamed protein product [Mus musculus]
 gi|74267717|gb|AAI02477.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
 gi|77415376|gb|AAI06153.1| Ribosomal protein S4, X-linked [Mus musculus]
 gi|90075468|dbj|BAE87414.1| unnamed protein product [Macaca fascicularis]
 gi|119592223|gb|EAW71817.1| ribosomal protein S4, X-linked, isoform CRA_c [Homo sapiens]
 gi|123993841|gb|ABM84522.1| ribosomal protein S4, X-linked [synthetic construct]
 gi|123996497|gb|ABM85850.1| ribosomal protein S4, X-linked [synthetic construct]
 gi|148682180|gb|EDL14127.1| mCG116623 [Mus musculus]
 gi|148745531|gb|AAI41996.1| Ribosomal protein S4, Y-linked 2 [Bos taurus]
 gi|149042162|gb|EDL95869.1| rCG36441 [Rattus norvegicus]
 gi|189053066|dbj|BAG34688.1| unnamed protein product [Homo sapiens]
 gi|193783638|dbj|BAG53549.1| unnamed protein product [Homo sapiens]
 gi|296470839|tpg|DAA12954.1| TPA: ribosomal protein S4, X-linked [Bos taurus]
 gi|327239242|gb|AEA39488.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
 gi|327239334|gb|AEA39534.1| ribosomal protein S4 X-linked [Ailuropoda melanoleuca]
 gi|387542680|gb|AFJ71967.1| 40S ribosomal protein S4, X isoform X isoform [Macaca mulatta]
          Length = 263

 Score =  346 bits (887), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|301780256|ref|XP_002925549.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Ailuropoda
           melanoleuca]
          Length = 304

 Score =  346 bits (887), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 66  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 125

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 126 GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 185

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 186 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 245

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 246 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 303


>gi|395862302|ref|XP_003803397.1| PREDICTED: 40S ribosomal protein S4, X isoform [Otolemur garnettii]
          Length = 263

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|950115|gb|AAB01670.1| ribosomal protein S4, partial [Felis catus]
 gi|440898938|gb|ELR50333.1| hypothetical protein M91_14309, partial [Bos grunniens mutus]
          Length = 262

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 204 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 261


>gi|281338943|gb|EFB14527.1| hypothetical protein PANDA_015068 [Ailuropoda melanoleuca]
          Length = 263

 Score =  345 bits (886), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|126327259|ref|XP_001365342.1| PREDICTED: 40S ribosomal protein S4-like [Monodelphis domestica]
          Length = 263

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLATHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|402868885|ref|XP_003898513.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
          Length = 263

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIVVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I N+E+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNKERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392882228|gb|AFM89946.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 197/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI++LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIILLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|119592221|gb|EAW71815.1| ribosomal protein S4, X-linked, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 161/237 (67%), Positives = 195/237 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ +
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261


>gi|392884050|gb|AFM90857.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 197/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR++  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRNILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|296212730|ref|XP_002752965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Callithrix jacchus]
          Length = 263

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYAL   EV  I MQR++ +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALIGDEVKKICMQRYIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|402869907|ref|XP_003898985.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Papio anubis]
          Length = 263

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK++LCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYQLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|344281914|ref|XP_003412721.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Loxodonta
           africana]
          Length = 333

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 95  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 154

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 155 GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 214

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 215 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 274

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 275 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 332


>gi|417408892|gb|JAA50980.1| Putative 40s ribosomal protein s4, partial [Desmodus rotundus]
          Length = 236

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/235 (68%), Positives = 194/235 (82%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 1   APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 61  DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 121 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235


>gi|348570508|ref|XP_003471039.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
           porcellus]
          Length = 263

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|62896517|dbj|BAD96199.1| ribosomal protein S4, X-linked X isoform variant [Homo sapiens]
          Length = 263

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392874478|gb|AFM86071.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392873332|gb|AFM85498.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392873708|gb|AFM85686.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392873792|gb|AFM85728.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392874658|gb|AFM86161.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392874704|gb|AFM86184.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392875138|gb|AFM86401.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392875380|gb|AFM86522.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392875746|gb|AFM86705.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392875962|gb|AFM86813.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392876190|gb|AFM86927.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392876292|gb|AFM86978.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392876322|gb|AFM86993.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392876546|gb|AFM87105.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392878526|gb|AFM88095.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392878612|gb|AFM88138.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392878672|gb|AFM88168.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392878808|gb|AFM88236.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392878934|gb|AFM88299.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392879118|gb|AFM88391.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392879172|gb|AFM88418.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392879522|gb|AFM88593.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392879718|gb|AFM88691.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392880066|gb|AFM88865.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392880068|gb|AFM88866.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392880320|gb|AFM88992.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392880570|gb|AFM89117.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392880610|gb|AFM89137.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392881410|gb|AFM89537.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392882084|gb|AFM89874.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392882130|gb|AFM89897.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392882582|gb|AFM90123.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392882678|gb|AFM90171.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392883756|gb|AFM90710.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392883898|gb|AFM90781.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392883956|gb|AFM90810.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|53933236|ref|NP_001005589.1| 40S ribosomal protein S4, X isoform [Danio rerio]
 gi|82180997|sp|Q642H9.3|RS4X_DANRE RecName: Full=40S ribosomal protein S4, X isoform
 gi|51980251|gb|AAH81584.1| Ribosomal protein S4, X-linked [Danio rerio]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRL+YD KGRF +H + +EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVVSIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVRKILIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKF+ GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D++G+ FATRL N+F IGKG+KPWVSLP+GKG++L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKRLAAKQSS 262


>gi|392874404|gb|AFM86034.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDAVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|395528794|ref|XP_003766510.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Sarcophilus
           harrisii]
 gi|395528796|ref|XP_003766511.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Sarcophilus
           harrisii]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLEAGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|417398042|gb|JAA46054.1| Putative 40s ribosomal protein s4 [Desmodus rotundus]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/235 (68%), Positives = 194/235 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+++LE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTIQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259


>gi|392873726|gb|AFM85695.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|148229573|ref|NP_001090472.1| 40S ribosomal protein S4 [Xenopus laevis]
 gi|117949829|sp|P49401.4|RS4_XENLA RecName: Full=40S ribosomal protein S4
 gi|77748204|gb|AAI06701.1| MGC132392 protein [Xenopus laevis]
          Length = 263

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITSEEAKYKLCKVRKTWVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|296204918|ref|XP_002749534.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
           [Callithrix jacchus]
          Length = 263

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+ PHK RECLP+I+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTSPHKLRECLPIIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRIKPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPQGKGIRLTIAEERDKRLAAKQSS 262


>gi|126722859|ref|NP_001075891.1| 40S ribosomal protein S4 [Bos taurus]
 gi|126010823|gb|AAI33508.1| Ribosomal protein S4, Y-linked 1 [Bos taurus]
 gi|296474500|tpg|DAA16615.1| TPA: ribosomal protein S4, Y-linked 1 [Bos taurus]
 gi|440910374|gb|ELR60176.1| 40S ribosomal protein S4 [Bos grunniens mutus]
          Length = 263

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|45360467|ref|NP_988912.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
 gi|82186868|sp|Q6PBC4.3|RS4_XENTR RecName: Full=40S ribosomal protein S4
 gi|38181707|gb|AAH59771.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
 gi|50416656|gb|AAH77671.1| 40S ribosomal protein S4 [Xenopus (Silurana) tropicalis]
 gi|89272957|emb|CAJ83152.1| ribosomal protein s4 x linked [Xenopus (Silurana) tropicalis]
          Length = 263

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|449460918|ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 216

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 161/175 (92%), Positives = 171/175 (97%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           +DVVSIPKT+ENFRLLYDTKGRFRLHS+RDEEAKFKLCKVRSVQFGQKGIPY+NTYDGRT
Sbjct: 39  LDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYLNTYDGRT 98

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           IRYPDPLIKANDTIKLDLE NKI DFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFE
Sbjct: 99  IRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFE 158

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           TIHIQDA GHEFATRLGNVFTIGKG+KPWVSLPKGKGIKL+IIEEARKR A+Q+A
Sbjct: 159 TIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRLASQSA 213


>gi|46048780|ref|NP_990439.1| 40S ribosomal protein S4 [Gallus gallus]
 gi|1350995|sp|P47836.2|RS4_CHICK RecName: Full=40S ribosomal protein S4
 gi|402296|gb|AAB59946.1| ribosomal protein S4 [Gallus gallus]
          Length = 263

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|147899358|ref|NP_001084941.1| 40S ribosomal protein S4 [Xenopus laevis]
 gi|47122925|gb|AAH70591.1| MGC81176 protein [Xenopus laevis]
          Length = 263

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|351701775|gb|EHB04694.1| 40S ribosomal protein S4 [Heterocephalus glaber]
          Length = 263

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVVSIEKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL   KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|327287930|ref|XP_003228681.1| PREDICTED: 40S ribosomal protein S4-like [Anolis carolinensis]
          Length = 263

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392883816|gb|AFM90740.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGIKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|227229|prf||1617101C ribosomal protein S4
          Length = 263

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D  G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDRNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|432920855|ref|XP_004080004.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Oryzias
           latipes]
          Length = 245

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVRKIIIGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 187 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 244


>gi|387018384|gb|AFJ51310.1| 40S ribosomal protein S4-like [Crotalus adamanteus]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGK+RTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392877236|gb|AFM87450.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 245

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D  G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 187 FDVVHVKDTNGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 244


>gi|348572544|ref|XP_003472052.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cavia
           porcellus]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGEHFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL   KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLASGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392879752|gb|AFM88708.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ L+NRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLKNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|348540605|ref|XP_003457778.1| PREDICTED: 40S ribosomal protein S4-like [Oreochromis niloticus]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE +KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLESSKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|339521943|gb|AEJ84136.1| 40S ribosomal protein S4 X isoform [Capra hircus]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RPIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+G+GI+L+I EE  KR+AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGRGIRLTIAEERDKRRAAKQSS 262


>gi|392881226|gb|AFM89445.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP + T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPRLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392882682|gb|AFM90173.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+G+GI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGEGIRLAIAEERDKRLAAKQSS 262


>gi|392884008|gb|AFM90836.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFI+FD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIEFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|350536323|ref|NP_001232240.1| putative ribosomal protein S4 [Taeniopygia guttata]
 gi|197127213|gb|ACH43711.1| putative ribosomal protein S4 [Taeniopygia guttata]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392878524|gb|AFM88094.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREGHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|355757464|gb|EHH60989.1| Single copy abundant mRNA protein, partial [Macaca fascicularis]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTPDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KI+DFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKISDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|432920853|ref|XP_004080003.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Oryzias
           latipes]
          Length = 263

 Score =  343 bits (879), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVRKIIIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 262


>gi|395519902|ref|XP_003764080.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Sarcophilus
           harrisii]
          Length = 263

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +    KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392880372|gb|AFM89018.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLK+ALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKHALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|307109802|gb|EFN58039.1| hypothetical protein CHLNCDRAFT_59606 [Chlorella variabilis]
          Length = 261

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 159/230 (69%), Positives = 190/230 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK+RECLPLIL+LRNRLKYALT +EV +ILMQR V VDGKVRTDKTYP 
Sbjct: 25  GIFAPKPSPGPHKTRECLPLILLLRNRLKYALTGKEVTSILMQRLVEVDGKVRTDKTYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ IPKT+E+FRL+YD KGRF +H +  EEA +KLCKV+ + FG+ GIP+I T+DG
Sbjct: 85  GFMDVIDIPKTDEHFRLVYDAKGRFVVHRITKEEASYKLCKVKRLAFGKGGIPHIGTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP IK NDT+ LDLE  K+ DFIKFDVGN+ M TGG N GRVG I ++EKHKGS
Sbjct: 145 RTVRYPDPEIKVNDTVMLDLESGKVKDFIKFDVGNLAMATGGHNNGRVGTIVHKEKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 276
           F+ +HI+DA GH FATR+ NVF IGKG KP +SLPKGKGI+ SI++E  K
Sbjct: 205 FDIVHIKDAAGHTFATRMTNVFVIGKGDKPMISLPKGKGIRQSILQEQAK 254


>gi|392878002|gb|AFM87833.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVIGIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|443722694|gb|ELU11454.1| hypothetical protein CAPTEDRAFT_152725 [Capitella teleta]
          Length = 259

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 157/235 (66%), Positives = 195/235 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALTY EV+ IL QR + VD KVRTDKTYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTYTEVMKILNQRLIKVDNKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI +TNENFRL+YD KGRF +H +  EEAK+KLC+VR+++ G KG+P++ T+D 
Sbjct: 85  GFMDVISIERTNENFRLIYDVKGRFAVHRITPEEAKYKLCRVRALKTGPKGVPFLTTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI D+IKFD GN+ M+TGGRN GRVG+I +REKH GS
Sbjct: 145 RTIRYPDPLIKPNDTVQVDLATGKIKDYIKFDSGNLCMITGGRNLGRVGLITHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ IH++D  GH FATR+ NVF IGKG++ WVSLPKGKG+KLSI EE  KR A++
Sbjct: 205 FDIIHVKDTTGHIFATRMSNVFVIGKGNRAWVSLPKGKGVKLSIAEERDKRLASK 259


>gi|392877122|gb|AFM87393.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  342 bits (878), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+ RL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHLRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|449269808|gb|EMC80554.1| 40S ribosomal protein S4, partial [Columba livia]
          Length = 236

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/235 (67%), Positives = 194/235 (82%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 1   APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 60

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 61  DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 120

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 121 RYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 180

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 181 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 235


>gi|318037367|ref|NP_001187069.1| 40S ribosomal protein S4 [Ictalurus punctatus]
 gi|50401280|sp|Q90YS0.3|RS4_ICTPU RecName: Full=40S ribosomal protein S4
 gi|15294019|gb|AAK95186.1|AF402812_1 40S ribosomal protein S4 [Ictalurus punctatus]
          Length = 263

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YD KGRF +H + +EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDVKGRFTVHRITNEEAKYKLCKVKKILIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IKANDT+++DLE  KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+K WVS+P+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392875924|gb|AFM86794.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD  N+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTDNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|291383207|ref|XP_002708125.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
           cuniculus]
          Length = 263

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/235 (67%), Positives = 193/235 (82%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRN+LKYALT  EV  I MQR + +DGKVR D TYPAGFM
Sbjct: 28  APRPSTGPHKLRECLPLIIFLRNKLKYALTGDEVKKICMQRFIKIDGKVRADITYPAGFM 87

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 88  DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 148 RYPDPLIKMNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 207

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 208 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|405967288|gb|EKC32468.1| 40S ribosomal protein S4, X isoform [Crassostrea gigas]
          Length = 243

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 192/237 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI+ LRNRLKYALTY EV  I MQR + VD KVRTDK +P 
Sbjct: 7   GVFAPRPSTGPHKLRESLPLIVFLRNRLKYALTYDEVKKITMQRLIKVDAKVRTDKNFPT 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNENFRLLYD KGRF +H ++ EEAK+KLC+VR V    KG+PYI T+DG
Sbjct: 67  GFMDVISIEKTNENFRLLYDVKGRFTVHRIQKEEAKYKLCRVRKVGVAAKGVPYITTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDT+ LD+   KI DFIKFD GN+ MVTGG N GRVG+I++RE+H GS
Sbjct: 127 RTIRYPDPLVKVNDTVMLDIGTGKIKDFIKFDSGNLCMVTGGHNLGRVGVIQHRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D++GH +ATRL  VF IGKG+KPW+SLPKGKG+KLSI EE  +R AA+ +
Sbjct: 187 FDIVHIKDSVGHTYATRLSYVFVIGKGNKPWISLPKGKGVKLSIAEERDRRLAAKTS 243


>gi|328769177|gb|EGF79221.1| hypothetical protein BATDEDRAFT_35382 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 293

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK+RECLPLI+ +RNRL+YALT +E  AI+ QR + VDGKVRTD TYPA
Sbjct: 55  GTWAPKPSAGPHKTRECLPLIVFIRNRLRYALTNQETKAIVNQRLIKVDGKVRTDMTYPA 114

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YD KGRF +H + DEEAK+KLCKVR V+ GQK IPYI T+DG
Sbjct: 115 GFMDVISIEKTGENFRLIYDVKGRFTIHRITDEEAKYKLCKVRQVKIGQKAIPYIVTHDG 174

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDT+K+D+   K T++IKFD GNI  VTGGRN GR+G+I +REKH G 
Sbjct: 175 RTIRYPDPLVKVNDTVKVDIATGKFTEYIKFDSGNIAYVTGGRNMGRIGVITHREKHHGG 234

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE +HI+DA+ H FATR+ NVF +G+G++ W+SLPKGKG+KL+I EE  +R+    A+
Sbjct: 235 FEIVHIKDAVDHTFATRISNVFVVGQGNQSWISLPKGKGVKLTISEERDRRREKLLAS 292


>gi|452823075|gb|EME30088.1| 40S ribosomal protein S4e [Galdieria sulphuraria]
          Length = 262

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/230 (69%), Positives = 191/230 (83%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RE LPL+L+LRNRLKYAL  RE +AILMQR V VDGKVRTDKT+PA
Sbjct: 25  GIWAPRPSSGPHKLRESLPLLLILRNRLKYALNNREAVAILMQRLVKVDGKVRTDKTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ + +TNE FRLLYD KGRFRLH +  EE K+KLC+V+  Q G +GIPYI T+DG
Sbjct: 85  GFMDVIELERTNETFRLLYDVKGRFRLHRITPEEGKYKLCRVKRAQMGVRGIPYIATHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+ LDLE  K+TDF+KF+VGN+ M+TGG N GRVG+I++REKH GS
Sbjct: 145 RTIRYPDPAIKHNDTVVLDLETGKVTDFLKFEVGNLCMITGGHNIGRVGLIQHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 276
            E IH++DA G EFAT+L NVF IGKG++P+VSLPKGKGI+ SI+EE  K
Sbjct: 205 TEIIHVRDARGQEFATQLNNVFVIGKGNQPFVSLPKGKGIRFSILEEQEK 254


>gi|395823987|ref|XP_003785255.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Otolemur garnettii]
 gi|395823989|ref|XP_003785256.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Otolemur garnettii]
          Length = 263

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G K IP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKEIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDF+KFD GN+ M TGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFVKFDTGNLCMATGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|431838156|gb|ELK00088.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 264

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/235 (67%), Positives = 192/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KITDFIKFD  N+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKITDFIKFDTSNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259


>gi|326917220|ref|XP_003204899.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
          Length = 263

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+  EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTNAEERDKRLAAKQSS 262


>gi|74136531|ref|NP_001028160.1| 40S ribosomal protein S4, Y isoform 1 [Monodelphis domestica]
 gi|50401328|sp|O62739.3|RS4Y1_MONDO RecName: Full=40S ribosomal protein S4, Y isoform 1
 gi|3169291|gb|AAC32106.1| ribosomal protein S4 Y isoform [Monodelphis domestica]
          Length = 263

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +    KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT++++LE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|337930|gb|AAA36597.1| scar protein [Homo sapiens]
          Length = 244

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 195/238 (81%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 65

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 66  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 125

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 126 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 185

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 186 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 243


>gi|351705604|gb|EHB08523.1| 40S ribosomal protein S4 [Heterocephalus glaber]
          Length = 237

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 157/235 (66%), Positives = 193/235 (82%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGK+RTD TYPAGFM
Sbjct: 2   APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTDITYPAGFM 61

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 62  DVISIDKTGENFRLIYDTKGRFAIHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 121

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 122 RYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 181

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++D  G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 182 VHVKDTNGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKHSS 236


>gi|392883812|gb|AFM90738.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 158/234 (67%), Positives = 192/234 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+  VTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCTVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAA 258


>gi|354832417|gb|AER42698.1| 40S ribosomal protein S4 [Epinephelus coioides]
          Length = 263

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 262


>gi|392876638|gb|AFM87151.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+K WVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKLWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|19112469|ref|NP_595677.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
 gi|26006874|sp|Q9USW5.1|RS4B_SCHPO RecName: Full=40S ribosomal protein S4-B
 gi|6018736|emb|CAB57920.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
          Length = 262

 Score =  340 bits (873), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK+RECLPLI+ LRNRLKYAL  REV AILMQR + VDGKVRTD T+P 
Sbjct: 25  GTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 85  GFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKL+LE NKI  FIKFD    VMVTGGRN GRVG I +RE H GS
Sbjct: 145 RTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE IH++DAL  EFATRL NVF IG+  K W+SLPKGKG+KLSI EE  +R+A +  A
Sbjct: 205 FEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRALKGLA 262


>gi|392883806|gb|AFM90735.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT+E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTDEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTI YPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIHYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|392884390|gb|AFM91027.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 263

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKYKLCKVRKILVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK  DT+++DLE  KIT FIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPMIKVTDTVQIDLETGKITGFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+G+GI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGRGIRLTIAEERDKRLAAKQSS 262


>gi|74136523|ref|NP_001028159.1| 40S ribosomal protein S4, X isoform [Monodelphis domestica]
 gi|50401327|sp|O62738.3|RS4X_MONDO RecName: Full=40S ribosomal protein S4, X isoform
 gi|3169289|gb|AAC32105.1| ribosomal protein S4 X isoform [Monodelphis domestica]
          Length = 263

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 159/235 (67%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDTTYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR    G K IP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259


>gi|392875736|gb|AFM86700.1| 40S ribosomal protein S4 [Callorhinchus milii]
 gi|392883616|gb|AFM90640.1| 40S ribosomal protein S4 [Callorhinchus milii]
          Length = 264

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 159/239 (66%), Positives = 196/239 (82%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK-FKLCKVRSVQFGQKGIPYINTYD 165
           GFMDV+SI KTNE+FRL+YDTKGRF +H +  EEAK +KLCKVR +  G KGIP++ T+D
Sbjct: 85  GFMDVISIDKTNEHFRLIYDTKGRFAVHRITAEEAKQYKLCKVRKILVGTKGIPHLVTHD 144

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
            RTIRYPDP+IK  DT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H G
Sbjct: 145 ARTIRYPDPMIKVTDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 204

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           SF+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 SFDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQSS 263


>gi|440912198|gb|ELR61790.1| hypothetical protein M91_18687, partial [Bos grunniens mutus]
          Length = 278

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 159/235 (67%), Positives = 192/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 43  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 102

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 103 GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 162

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 163 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHLGS 222

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F  GKG+KPW+SL +GKGI+L+I EE  KR AA+
Sbjct: 223 FDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLHRGKGIRLTIAEERDKRLAAK 277


>gi|291395508|ref|XP_002714210.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
           cuniculus]
          Length = 263

 Score =  340 bits (871), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKG F +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGCFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATWLSNIFVIGKGNKPWISLPQGKGIRLTIAEERDKRLAAKQSS 262


>gi|90820002|gb|ABD98758.1| putative ribosomal protein S4e [Graphocephala atropunctata]
          Length = 263

 Score =  339 bits (870), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 196/238 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KGRF +H + +EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDVKGRFTIHRITEEEAKYKLCKVKRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+LD+  +KITD+I+FD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQLDIASSKITDYIRFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D  GH FATRL NVF IGKG+KP+VSLPKGKG+KLSI EE  KR AA+AA+
Sbjct: 205 FDIVHIKDTNGHTFATRLVNVFIIGKGTKPYVSLPKGKGVKLSIAEERDKRLAAKAAS 262


>gi|349802859|gb|AEQ16902.1| putative 40s ribosomal protein s4 [Pipa carvalhoi]
          Length = 235

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 159/234 (67%), Positives = 192/234 (82%), Gaps = 1/234 (0%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 3   APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPAGFM 61

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D RTI
Sbjct: 62  DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDARTI 121

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 122 RYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 181

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE  KR AA+ +
Sbjct: 182 VHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERDKRLAAKQS 235


>gi|19113142|ref|NP_596350.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
 gi|6094182|sp|P87158.2|RS4A_SCHPO RecName: Full=40S ribosomal protein S4-A
 gi|3150141|emb|CAA19128.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
          Length = 262

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK+RECLPLI+ LRNRLKYAL  REV AILMQR + VDGKVRTD T+P 
Sbjct: 25  GTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 85  GFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKL+LE NKI  FIKFD    VMVTGGRN GRVG I +RE H GS
Sbjct: 145 RTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE IH++DAL  EFATRL NVF IG+  K W+SLPKGKG+KLSI EE  +R+A +  A
Sbjct: 205 FEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRALKGLA 262


>gi|295792254|gb|ADG29131.1| 40S ribosomal protein S4 [Epinephelus coioides]
          Length = 262

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE H GS
Sbjct: 144 RTIRYPDPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNREXHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 204 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 261


>gi|159145754|gb|ABW90414.1| putative ribosomal protein S4 [Barentsia elongata]
          Length = 259

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 157/234 (67%), Positives = 189/234 (80%), Gaps = 1/234 (0%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLIL +RNRLKYALTY E   I+ QR V VDGKVRTD  YP+GFM
Sbjct: 27  APRPSTGPHKLRECLPLILFIRNRLKYALTYDEAKKIMNQRLVKVDGKVRTDICYPSGFM 86

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI +TNENFRL+YD KGRF +H +  EEAK+KLCKVR V    KG+PY+ T+D RTI
Sbjct: 87  DVISIERTNENFRLVYDVKGRFAVHRISGEEAKYKLCKVRKVSVAPKGVPYLTTHDARTI 146

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPL+K NDT+++DL   KI DFIKFD GN+ ++TGGRN GRVG++ +REKH GSF+ 
Sbjct: 147 RYPDPLVKMNDTVQVDLSTGKIKDFIKFDSGNLCLITGGRNTGRVGVVTHREKHPGSFDI 206

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           +HI+DA+GH FATR  NVF IGKG+KPW+SLPKGKG+KLSI EE R R+  Q A
Sbjct: 207 VHIKDAVGHNFATRASNVFIIGKGNKPWISLPKGKGVKLSIAEE-RDRRLMQKA 259


>gi|109083806|ref|XP_001094914.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Macaca mulatta]
 gi|297297972|ref|XP_002805099.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Macaca mulatta]
 gi|297297974|ref|XP_002805100.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
           [Macaca mulatta]
 gi|297297976|ref|XP_002805101.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 4
           [Macaca mulatta]
          Length = 264

 Score =  339 bits (869), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 159/239 (66%), Positives = 196/239 (82%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           GF MD++SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D
Sbjct: 85  GFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 144

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
            RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H G
Sbjct: 145 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 204

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           SF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 SFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 263


>gi|19115086|ref|NP_594174.1| 40S ribosomal protein S4 [Schizosaccharomyces pombe 972h-]
 gi|26006873|sp|Q9P4W9.1|RS4C_SCHPO RecName: Full=40S ribosomal protein S4-C
 gi|8247670|emb|CAB93014.1| 40S ribosomal protein S4 (predicted) [Schizosaccharomyces pombe]
          Length = 262

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK+RECLPLI+ LRNRLKYAL  REV AILMQR + VDGKVRTD T+P 
Sbjct: 25  GTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 85  GFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKL+LE NKI  FIKFD    VMVTGGRN GRVG I +RE H GS
Sbjct: 145 RTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE IH++DAL  EFATRL NVF IG+  K W+SLPKGKG+KLSI EE  +R+A +  A
Sbjct: 205 FEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRALKGLA 262


>gi|148695326|gb|EDL27273.1| mCG127176 [Mus musculus]
          Length = 245

 Score =  339 bits (869), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC PLI+ LRNRLKYALT  EV  I MQR + +D KVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECPPLIIFLRNRLKYALTGDEVKKICMQRFIKIDVKVRTDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEA++KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAQYKLCKVRKIFVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 187 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 244


>gi|3724352|dbj|BAA33778.1| ribosomal protein S4 [Schizosaccharomyces pombe]
          Length = 260

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK+RECLPLI+ LRNRLKYAL  REV AILMQR + VDGKVRTD T+P 
Sbjct: 23  GTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDSTFPT 82

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 83  GFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDG 142

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIKL+LE NKI  FIKFD    VMVTGGRN GRVG I +RE H GS
Sbjct: 143 RTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGS 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE IH++DAL  EFATRL NVF IG+  K W+SLPKGKG+KLSI EE  +R+A +  A
Sbjct: 203 FEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRALKGLA 260


>gi|395546360|ref|XP_003775056.1| PREDICTED: 40S ribosomal protein S4, X isoform [Sarcophilus
           harrisii]
          Length = 291

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/235 (67%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 53  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDTTYPV 112

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E FRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D 
Sbjct: 113 GFMDVISIEKTGEYFRLIYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKGIPHLVTHDA 172

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G++ NREKH GS
Sbjct: 173 RTIRYPDPLIRVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVVTNREKHPGS 232

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 233 FDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 287


>gi|159466042|ref|XP_001691218.1| ribosomal protein S4, component of cytosolic 80S ribosome and 40S
           small subunit [Chlamydomonas reinhardtii]
 gi|158279190|gb|EDP04951.1| ribosomal protein S4 [Chlamydomonas reinhardtii]
          Length = 261

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 161/237 (67%), Positives = 197/237 (83%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK RECLPL+L+LRNRLKYALT +EV +ILMQR V VDGKVRTD TYP 
Sbjct: 25  GIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKEVQSILMQRLVKVDGKVRTDHTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT+ENFRL+ DTKGRF +H +  EEA +KLC+VR V+FG+ G+PY+ T+DG
Sbjct: 85  GFMDVISMEKTDENFRLVLDTKGRFVVHRISKEEAAYKLCRVRKVEFGKGGVPYVITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IKAND+I LD+E  KI +F+K DVG +VMVTGG N GRVG I ++EKHKGS
Sbjct: 145 RTIRYPDPEIKANDSIMLDIETGKIKEFVKNDVGALVMVTGGHNAGRVGKIVHKEKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQA 282
           FE +HI+DA G+ FATRL N+F IGK  KP +SLPKGKGI+L+II+E +KR +A QA
Sbjct: 205 FEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIRLTIIQEQKKRYEAGQA 261


>gi|296484165|tpg|DAA26280.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
          Length = 262

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 194/238 (81%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEV-KICMQRFIKIDGKVRTDITYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENF L+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 144 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR  A+ ++
Sbjct: 204 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLVAKQSS 261


>gi|410906839|ref|XP_003966899.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Takifugu
           rubripes]
          Length = 263

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKILIGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL+  KITDFIKFD  N+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ A+
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 262


>gi|296485647|tpg|DAA27762.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
          Length = 263

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+   KT ENFRL+YDT GRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVIRTDKTGENFRLIYDTTGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F  GKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVTGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|255077197|ref|XP_002502247.1| predicted protein [Micromonas sp. RCC299]
 gi|226517512|gb|ACO63505.1| predicted protein [Micromonas sp. RCC299]
          Length = 258

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 153/234 (65%), Positives = 193/234 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK+RECLPL L+LRNRLKYALTY+EV  ILMQR V VDGK R DK YPA
Sbjct: 25  GVFAPKPSAGPHKTRECLPLCLILRNRLKYALTYKEVTTILMQRLVKVDGKTRVDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT+E+FRL+YD KGRF +H +   EA++KLCKV++ + G KG+P +N +DG
Sbjct: 85  GFMDVVSIDKTDEHFRLIYDAKGRFVVHRISSTEAQYKLCKVKTKRLGDKGVPCVNLHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  +DT+ +D+  NKITD IK+D G +VM+TGGRNRGRVG+I+ REKHKGS
Sbjct: 145 RTIRYPDPVINESDTVMVDIATNKITDHIKYDAGALVMITGGRNRGRVGVIQRREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
            E +H++DA GHEFATR  N F IG+G+KP +SLPKGKG++L+I+EE  +R+ A
Sbjct: 205 VEVVHVKDAGGHEFATRSSNTFVIGEGNKPMISLPKGKGLRLTIVEELERRKEA 258


>gi|157690730|tpe|CAL69092.1| TPA: putative 40S ribosomal protein S4 [Spadella cephaloptera]
          Length = 260

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/236 (66%), Positives = 190/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PSSGPHK RECLPL L LRNRLKYALTY EV  IL QR V VDG+VRTD T+P 
Sbjct: 25  GCYAPRPSSGPHKLRECLPLALFLRNRLKYALTYSEVKKILAQRLVKVDGRVRTDHTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV + KT ENFRL+YD KGR+++H +  EEA +KLC V+ V  G KGIPY+ T DG
Sbjct: 85  GFMDVVQMEKTGENFRLIYDVKGRYKVHRISKEEALYKLCIVKKVSVGPKGIPYLTTTDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK+ND IK+D+  NKITD+IKF+ GN+ MVTGGRN GRVGII +R +H GS
Sbjct: 145 RTIRYPDPLIKSNDCIKVDIATNKITDYIKFESGNVAMVTGGRNLGRVGIIMHRGRHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++DA GH FATRL  +FTIGKGSKPWVSLP+GKGI++++ EE  KR AA++
Sbjct: 205 FDIVHVKDAAGHSFATRLNYIFTIGKGSKPWVSLPEGKGIRMTVAEERDKRIAAKS 260


>gi|302846722|ref|XP_002954897.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
 gi|300259872|gb|EFJ44096.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
          Length = 261

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 196/237 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK RECLPL+L+LRNRLKYALT +EV +ILMQR V VDGKVRTD TYP 
Sbjct: 25  GIFAPKPSAGPHKQRECLPLLLILRNRLKYALTGKEVQSILMQRLVKVDGKVRTDHTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT+E+FRL+ DTKGRF +H +  EEA +KLC+VR VQFG+ G+PY+ T+DG
Sbjct: 85  GFMDVISIEKTDEHFRLVLDTKGRFVVHRISKEEAAYKLCRVRKVQFGKGGVPYVATHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP +KAND++ LD+E  KI +++K DVG +VMVTGG N GRVG I ++EKHKGS
Sbjct: 145 RTVRYPDPEVKANDSVMLDIETGKIKEYVKNDVGALVMVTGGHNAGRVGKIVHKEKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +HI+DA G+ FATRL N+F IGK  KP +SLPKGKGI+L+II+E +KR  A +A
Sbjct: 205 FEIVHIEDAAGNRFATRLTNIFVIGKEGKPLISLPKGKGIRLTIIQEQKKRYEAASA 261


>gi|303289433|ref|XP_003064004.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454320|gb|EEH51626.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 258

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/234 (67%), Positives = 189/234 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPL L+LRNRLKYALTY+EV  ILMQR V VDGK R DK YPA
Sbjct: 25  GVFAPKPSPGPHKQRECLPLCLILRNRLKYALTYKEVTTILMQRLVKVDGKTRIDKCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT+E+FRL+YD KGRF +H +   E+++KLCKVR+ + G KG+P +N +DG
Sbjct: 85  GFMDVVSIDKTDEHFRLIYDQKGRFVVHRITQLESQYKLCKVRTKKLGDKGVPCVNLHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +DT+ +D+  N IT+  KFD G + M+TGGRN GRVG+I+ REKHKGS
Sbjct: 145 RTIRYPDPEIKESDTVMVDISSNTITNHFKFDAGALAMITGGRNAGRVGVIQRREKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           FE IH+QDA GH+FATR  NVF IG+G+KP VSLPKGKGIKLSI+EE  KR+ A
Sbjct: 205 FEIIHVQDAAGHQFATRATNVFVIGEGNKPMVSLPKGKGIKLSIVEELEKRKEA 258


>gi|357615430|gb|EHJ69651.1| 40S ribosomal protein S4 [Danaus plexippus]
          Length = 245

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 7   GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKVR V  G K +PY+ T+DG
Sbjct: 67  GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPYLVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND+I+LD+  +KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 127 RTIRYPDPLIKVNDSIQLDIASSKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D++GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE  KR AA+ AA
Sbjct: 187 FDIVHIKDSMGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAAKVAA 244


>gi|355704916|gb|EHH30841.1| Single copy abundant mRNA protein, partial [Macaca mulatta]
          Length = 263

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/238 (67%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H  S
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPAS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+  H +DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDGGHGKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|291400837|ref|XP_002716797.1| PREDICTED: ribosomal protein S4, X-linked X-like [Oryctolagus
           cuniculus]
          Length = 263

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 157/235 (66%), Positives = 190/235 (80%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 28  APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 87

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+S+ KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 88  DVISVDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 147

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 148 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANMGRIGVITNRERHPGSFDV 207

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            H++D  G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+  +
Sbjct: 208 AHVKDVNGNSFATWLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQGS 262


>gi|124300793|dbj|BAF45892.1| ribosomal protein S4 [Solea senegalensis]
          Length = 263

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEYFRLIYDVKGRFTVHRITAEEAKYKLCKVKKLLVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 205 FDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 262


>gi|146418285|ref|XP_001485108.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
 gi|146390581|gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
          Length = 244

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 159/237 (67%), Positives = 193/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ HV VDGKVRTD T+PA
Sbjct: 7   GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTFPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 67  GFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGIPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DLE  KI+DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 127 RTIRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGRVGVITHREKHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 187 FDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 243


>gi|22758868|gb|AAN05593.1| ribosomal protein S4 [Argopecten irradians]
          Length = 259

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 154/237 (64%), Positives = 193/237 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLP+I+ LRNRLKYALTY EV  I+ QR + VDGKVRT K YPA
Sbjct: 23  GVFAPRPSTGPHKLRECLPMIVFLRNRLKYALTYDEVKKIVNQRLIKVDGKVRTAKDYPA 82

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+V+ V  G KG+P + T+D 
Sbjct: 83  GFMDVITIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKRVTVGAKGVPMLTTHDA 142

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL K NDTI +D+   K+ +FIKFD GN+ M+TGG N GRVG+I++RE+H GS
Sbjct: 143 RTIRYPDPLAKVNDTIMVDIATGKMKEFIKFDSGNLCMITGGHNLGRVGVIQHRERHPGS 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+DALGH FATRL  VF IGKG+KPW+SLP+GKG+KLSI EE  +R AA+++
Sbjct: 203 FDIVHIKDALGHTFATRLSYVFVIGKGNKPWISLPRGKGVKLSIAEERDRRMAAKSS 259


>gi|45187482|ref|NP_983705.1| 40S ribosomal protein S4 [Ashbya gossypii ATCC 10895]
 gi|44982220|gb|AAS51529.1| ADL391Cp [Ashbya gossypii ATCC 10895]
 gi|374106917|gb|AEY95825.1| FADL391Cp [Ashbya gossypii FDAG1]
          Length = 261

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 191/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGKVKRVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G+I +RE+H+G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLATGKITDFIKFDTGKLVYVTGGRNLGRIGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  +PW+SLP+GKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPRGKGIKLSIAEERDRRRAQQG 260


>gi|148680472|gb|EDL12419.1| mCG124430 [Mus musculus]
          Length = 263

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 192/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+GPHK RECLPLI+ LRNRLKYAL   EV  I +QR + +DGKVRTD TYPA
Sbjct: 25  GVFAPGPSTGPHKLRECLPLIIFLRNRLKYALNGDEVKKICVQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  ENFRL+YDTKGRF +H +  EEA++KLCKVR +  G KGIP++ T+DG
Sbjct: 85  GFMDVISIDKNRENFRLIYDTKGRFAVHRITLEEAQYKLCKVRKIFVGTKGIPHLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  K+TDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKVTDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKG++L+I EE  KR AA+
Sbjct: 205 FDVVHVKDASGNSFATRLSNIFVIGKGNKPWISLPRGKGVRLTIAEERDKRLAAK 259


>gi|384252070|gb|EIE25547.1| ribosomal protein S4 component of cytosolic 80S ribosome and 40S
           small subunit [Coccomyxa subellipsoidea C-169]
          Length = 260

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 191/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPL L+LRNRLKYALT +EV++ILMQR V VDGKVRTD TYPA
Sbjct: 25  GIFAPKPSPGPHKQRECLPLTLMLRNRLKYALTGKEVVSILMQRLVRVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT+E+FRL+YD+KGRF  H +  EEA +KL KV   Q G+ G+PYI T+DG
Sbjct: 85  GFMDVIDIEKTDEHFRLIYDSKGRFVTHRITKEEAGYKLLKVTRQQVGKGGVPYIATHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+  D+E  KI DFIKFDVG +VMVTGGRN GRVG I NR+KHKGS
Sbjct: 145 RTIRYPDPDIKVNDTVMFDIETGKIKDFIKFDVGQLVMVTGGRNVGRVGTIVNRQKHKGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ I ++D++GH+FATRL NVF IGK  KP +SLPKGKG++L I++E  KR AA+A
Sbjct: 205 FDIIVVKDSVGHQFATRLSNVFIIGKDEKPLISLPKGKGVRLDILQEQAKRDAAKA 260


>gi|296192615|ref|XP_002744145.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Callithrix jacchus]
          Length = 263

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I K  ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVITINKMGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE++ GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERYPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I E   KR AA+ ++
Sbjct: 205 FDAVHVKDANGNSFATRLPNIFVIGKGNKPWISLPRGKGIRLTIAEGRDKRLAAKQSS 262


>gi|363755780|ref|XP_003648106.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356892142|gb|AET41289.1| hypothetical protein Ecym_7471 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 261

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYP 
Sbjct: 25  GCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G KG+PY+ T+DG
Sbjct: 85  GFMDVISLEATNENFRLVYDVKGRFAVHRITDEEAAYKLGKVKKVQLGNKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G+I +RE+H+G 
Sbjct: 145 RTIRYPDPNVKVNDTVKVDLATGKITDFIKFDTGKLVYVTGGRNLGRIGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  +PW+SLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLENTFVTRLNNVFVIGEQGRPWISLPKGKGIKLSIAEERDRRRAQQG 260


>gi|255730477|ref|XP_002550163.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
 gi|240132120|gb|EER31678.1| 40S ribosomal protein S4 [Candida tropicalis MYA-3404]
          Length = 244

 Score =  336 bits (862), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AI+MQ+HV VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDSTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 67  GFMDVITLEATNEHFRLIYDVKGKFAVHRISAEEASYKLGKVKKVQLGKKGVPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLIKANDT+K+DL   KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 127 RTLRYPDPLIKANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 187 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 243


>gi|126139561|ref|XP_001386303.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
 gi|126093585|gb|ABN68274.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
          Length = 262

 Score =  336 bits (862), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 193/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++G+PY+ T+DG
Sbjct: 85  GFMDVISLEATNEHFRLIYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLI+ANDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|260808562|ref|XP_002599076.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
 gi|229284352|gb|EEN55088.1| hypothetical protein BRAFLDRAFT_81739 [Branchiostoma floridae]
          Length = 264

 Score =  336 bits (862), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 188/237 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL L LRNRLKYALTY EV  ILMQR + VDGKVRTD+ YP+
Sbjct: 25  GKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRTDRCYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KLCKVR V  G KGIP + T+D 
Sbjct: 85  GFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVMTGPKGIPCLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ ND++++D+   KITD IKFD GN+ MVTGGRN GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D  GH FATRL N+F IG+G+KPWVSLPKGKGI LSI EE  +R A +AA
Sbjct: 205 FDIVHVKDTAGHTFATRLANIFIIGRGNKPWVSLPKGKGIHLSIAEERDRRLAMKAA 261


>gi|146413813|ref|XP_001482877.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
 gi|146392576|gb|EDK40734.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260]
          Length = 262

 Score =  336 bits (862), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 193/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLI+ANDT+K+DLE  KI+DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTLRYPDPLIRANDTVKIDLESGKISDFIKFDTGALVMVTGGRNLGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLENTFVTRLTNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|440911356|gb|ELR61037.1| hypothetical protein M91_01196, partial [Bos grunniens mutus]
          Length = 269

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 159/249 (63%), Positives = 194/249 (77%)

Query: 33  STSQLLLLTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHV 92
           S  +  +L     + + AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR  
Sbjct: 20  SAPKHWMLDKLTGVNVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFT 79

Query: 93  LVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQ 152
            +DGKV TD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR + 
Sbjct: 80  KIDGKVCTDITYPAGFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 139

Query: 153 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 212
            G KGIP++ T+D RTIRYPDPLIK N TI++DLE  KITDFIKFD GN+ MVTGG + G
Sbjct: 140 VGTKGIPHLVTHDARTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLG 199

Query: 213 RVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           R+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI L+I E
Sbjct: 200 RIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGICLTIAE 259

Query: 273 EARKRQAAQ 281
           E  KR AA+
Sbjct: 260 EREKRLAAK 268


>gi|146285351|gb|ABQ18253.1| ribosomal protein S4e [Lygus lineolaris]
          Length = 263

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTKDEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGR+ +H +  +EAK+KLCKVR VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLIYDVKGRYAIHRITADEAKYKLCKVRKVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL K NDTI+LD+  NKI D I+ D GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLAKVNDTIQLDIATNKIIDIIRMDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA GH FATRL NVF IGKGSK +VS+PKGKGIKLSI EE  +R AA+AA+
Sbjct: 205 FDIVHVKDATGHTFATRLNNVFIIGKGSKAYVSIPKGKGIKLSIAEERDRRLAAKAAS 262


>gi|68475117|ref|XP_718444.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|68475658|ref|XP_718177.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|46439933|gb|EAK99245.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|46440209|gb|EAK99518.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
          Length = 244

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AI+MQ+HV VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDTTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 67  GFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 127 RTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 187 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 243


>gi|238879347|gb|EEQ42985.1| 40S ribosomal protein S4 [Candida albicans WO-1]
          Length = 244

 Score =  335 bits (860), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AI+MQ+HV VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDTTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 67  GFMDVITLEATNEHFRLVYDVKGKFAVHRISGEEAAYKLGKVKKVQLGKKGVPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 127 RTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 187 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 243


>gi|320582410|gb|EFW96627.1| 40S ribosomal protein S4 [Ogataea parapolymorpha DL-1]
          Length = 262

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 160/234 (68%), Positives = 191/234 (81%), Gaps = 1/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+PA
Sbjct: 25  GVYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLIYDVKGRFAVHRITAEEASYKLGKVKKVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DLE  KITDF+KFD G +VMVTGGRN GRVG+I N+E+H+G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLETGKITDFLKFDTGRLVMVTGGRNLGRVGVITNKERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +HI+DAL + F TRL NVF IG +  KP+VSLPKGKGIKLSI EE  +R+A
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGAEAGKPYVSLPKGKGIKLSIAEERDRRRA 258


>gi|389608137|dbj|BAM17680.1| ribosomal protein S4 [Papilio xuthus]
 gi|389610695|dbj|BAM18959.1| ribosomal protein S4 [Papilio polytes]
          Length = 263

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKVR+V  G K +PY+ T+DG
Sbjct: 85  GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRAVGTGPKSVPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLIK ND+I+LD+  +KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 145 RTVRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D+ GH FATR+ NVF IGKG+K ++SLP+GKG++L+I EE  KR AA+ AA
Sbjct: 205 FDIVHIRDSTGHTFATRMNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAAKVAA 262


>gi|315115407|gb|ADT80676.1| ribosomal protein S4 [Euphydryas aurinia]
          Length = 263

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 194/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKVR V  G K +PY+ T+DG
Sbjct: 85  GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND+I+LD+  +KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDSIQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE  KR AA+ AA
Sbjct: 205 FDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAAKVAA 262


>gi|164429760|ref|XP_964251.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
 gi|157073608|gb|EAA35015.2| 40S ribosomal protein S4 [Neurospora crassa OR74A]
 gi|336463316|gb|EGO51556.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2508]
 gi|350297476|gb|EGZ78453.1| 40S ribosomal protein S4 [Neurospora tetrasperma FGSC 2509]
          Length = 261

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRETKAIMMQRLIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K++LE  KI DF+KFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGAIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  IH++DAL + FATR  NVF IG   KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 205 FNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVKLSIAEERDRRRANALA 260


>gi|68477663|ref|XP_717144.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|68477826|ref|XP_717065.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|241952448|ref|XP_002418946.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
 gi|46438762|gb|EAK98088.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|46438844|gb|EAK98169.1| likely cytosolic ribosomal protein S4 [Candida albicans SC5314]
 gi|223642285|emb|CAX44254.1| 40s ribosomal protein s4 (s7) [Candida dubliniensis CD36]
 gi|238883906|gb|EEQ47544.1| 40S ribosomal protein S4 [Candida albicans WO-1]
          Length = 262

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AI+MQ+HV VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEAAYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|158187698|gb|ABW23138.1| ribosomal protein rps4 [Arenicola marina]
          Length = 262

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 154/235 (65%), Positives = 192/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK+RECLP+++ LRNRLKYALTY EV  I+ QR + VDGKVRTDKTYP 
Sbjct: 26  GVFAPKPSTGPHKTRECLPMMIFLRNRLKYALTYTEVKKIVNQRLIKVDGKVRTDKTYPC 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KLCKV+    G KG+P++ T+DG
Sbjct: 86  GFMDVITIEKTGENFRLIYDVKGRFAVHRISAEEAKYKLCKVKKGLVGLKGVPHLVTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDTI++D+   KI +FIKFD GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 146 RTIRYPDPLVKVNDTIQVDIASGKIKEFIKFDSGNVCMITGGRNLGRVGTITHRERHPGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D++GH FATRL NVF IGKG KPWVSLP G+G+KL+I EE  +R AA+
Sbjct: 206 FDVVHIKDSMGHTFATRLNNVFVIGKGLKPWVSLPGGRGLKLTIAEERDRRIAAK 260


>gi|112984078|ref|NP_001037257.1| 40S ribosomal protein S4 [Bombyx mori]
 gi|74782218|sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4
 gi|54609289|gb|AAV34860.1| ribosomal protein S4 [Bombyx mori]
          Length = 263

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKV+ V  G K +PY+ T+DG
Sbjct: 85  GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND+I+LD+   KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE  KR AA+ AA
Sbjct: 205 FDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAAKVAA 262


>gi|448120177|ref|XP_004203912.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
 gi|359384780|emb|CCE78315.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
          Length = 262

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 159/237 (67%), Positives = 189/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ HV VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I  TNENFRL+YD KGRF +H +  EE  +KL KV+ V  G++G+PY+ T+DG
Sbjct: 85  GFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DF+KFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTGGRNMGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|440901836|gb|ELR52713.1| 40S ribosomal protein S4, partial [Bos grunniens mutus]
          Length = 271

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 156/230 (67%), Positives = 187/230 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 42  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQHFIKIDGKVRTDITYPA 101

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 102 GFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCKVRKIFVGTKGIPHLVTHDA 161

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 162 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 221

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 276
           F+ +H++DA G+ FATRL N+F  GKG+KPW+SLP+GKGI L+I EE  K
Sbjct: 222 FDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDK 271


>gi|387539852|gb|AFJ70553.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAAKQSS 262


>gi|345566169|gb|EGX49115.1| hypothetical protein AOL_s00079g69 [Arthrobotrys oligospora ATCC
           24927]
          Length = 258

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/234 (67%), Positives = 189/234 (80%), Gaps = 1/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE  AI+MQR + VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNAIVMQRLIQVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR VQ GQKGIPY+ T+D 
Sbjct: 85  GFMDVITIEKTGEHFRLIYDTKGRFTIHRITPEEAKYKLCKVRRVQLGQKGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+++DLE  KI DF+ FD G IVMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPSIKVNDTVQVDLETGKINDFVPFDTGAIVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+ +HI+DA+ + FATRL NVF IG   KPW+SLPKGKG+KL+I EE  +R+AA
Sbjct: 205 FDIVHIKDAIDNSFATRLSNVFIIGT-DKPWISLPKGKGVKLTIAEERDRRRAA 257


>gi|354548249|emb|CCE44986.1| hypothetical protein CPAR2_407890 [Candida parapsilosis]
          Length = 264

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 160/237 (67%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGKVKRVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND++K+DL   KITDF+KFD G +VMVTGGRN GR+G+I +REKH+G 
Sbjct: 145 RTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG+   KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRAQQG 261


>gi|344232944|gb|EGV64817.1| hypothetical protein CANTEDRAFT_113586 [Candida tenuis ATCC 10573]
          Length = 827

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/234 (67%), Positives = 192/234 (82%), Gaps = 1/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  RE  AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRETKAILMQQHVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YDTKGRF +H + +EEA +KL KV+ VQ G++GIPY  T+DG
Sbjct: 85  GFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGKVKKVQLGKRGIPYAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IKANDT+K+DLE  KITDFIKFD G +VMVTGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +HI+D+L + F TRL NVF IG +  KP+VSLPKGKGIKLSI EE  +R+A
Sbjct: 205 FDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGIKLSISEERDRRRA 258


>gi|254573092|ref|XP_002493655.1| 40S ribosomal protein S4 [Komagataella pastoris GS115]
 gi|238033454|emb|CAY71476.1| Protein component of the small (40S) ribosomal subunit
           [Komagataella pastoris GS115]
 gi|328354517|emb|CCA40914.1| 40S ribosomal protein S4 [Komagataella pastoris CBS 7435]
          Length = 282

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/236 (67%), Positives = 190/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVQVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEATYKLGKVKKVQLGKKGIPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK ND+IK+DL   KI DF+KFDVG +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPDIKVNDSIKIDLATGKILDFVKFDVGKLVMVTGGRNLGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL ++F TRL NVF IG+ + P +SLPKGKGIKLSI EE  +R+  Q 
Sbjct: 205 FDLVHIKDALENQFVTRLSNVFIIGEANAPIISLPKGKGIKLSIAEERDQRRQQQG 260


>gi|126273970|ref|XP_001387773.1| 40S ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
 gi|126213643|gb|EAZ63750.1| ribosomal protein S4 [Scheffersomyces stipitis CBS 6054]
          Length = 262

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++G+PY+ T+DG
Sbjct: 85  GFMDVISLEATNEHFRLVYDVKGRFAVHRITAEEASYKLGKVKKVQLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLI+ANDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTLRYPDPLIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+  Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLANVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRTQQG 261


>gi|444705790|gb|ELW47180.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 263

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           GL AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GLFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EE K+KLCKVR +  G KGI ++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEVKYKLCKVRKIFVGTKGISHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRY DPLIK NDTI+++L+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYSDPLIKVNDTIQINLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIRLTIAEERDKRLAAKQSS 262


>gi|344229651|gb|EGV61536.1| hypothetical protein CANTEDRAFT_124333 [Candida tenuis ATCC 10573]
 gi|344232943|gb|EGV64816.1| ribosomal protein S4e [Candida tenuis ATCC 10573]
          Length = 262

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 161/238 (67%), Positives = 194/238 (81%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  RE  AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGRETKAILMQQHVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YDTKGRF +H + +EEA +KL KV+ VQ G++GIPY  T+DG
Sbjct: 85  GFMDVISLEATNENFRLIYDTKGRFAVHRITNEEASYKLGKVKKVQLGKRGIPYAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IKANDT+K+DLE  KITDFIKFD G +VMVTGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPAIKANDTVKIDLETGKITDFIKFDTGRLVMVTGGRNLGRVGVIVHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+L + F TRL NVF IG +  KP+VSLPKGKGIKLSI EE R R+ AQ+ 
Sbjct: 205 FDLVHIKDSLENTFVTRLSNVFVIGTEAGKPYVSLPKGKGIKLSISEE-RDRRRAQSG 261


>gi|358422345|ref|XP_003585334.1| PREDICTED: 40S ribosomal protein S4-like [Bos taurus]
          Length = 263

 Score =  334 bits (857), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI  LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H +  +EAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|449548320|gb|EMD39287.1| hypothetical protein CERSUDRAFT_112935 [Ceriporiopsis subvermispora
           B]
          Length = 263

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 154/237 (64%), Positives = 190/237 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKEVLSIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA +KLCKV+ V  G KG+PYI T+DG
Sbjct: 85  GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLCKVKKVAIGTKGVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIK D+E+ KI D++KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPLIKVNDTIKFDIEQGKIADYVKFDTGNIVMITGGRNMGRAGVIVHREKHIGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D+L   FATR+ N+F IG+G KPW+SLPKGKG+KL+I EE   R+  +AA
Sbjct: 205 FDIVHVKDSLDRTFATRITNIFVIGEGIKPWISLPKGKGVKLTIAEERDVRRRQRAA 261


>gi|291239929|ref|XP_002739871.1| PREDICTED: ribosomal protein S4, X-linked-like [Saccoglossus
           kowalevskii]
          Length = 269

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 189/237 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RECLPLI+ LRNRLKYALT  E   I+MQR + +DGKVRTD TYPA
Sbjct: 33  GKFAPRPSTGPHKLRECLPLIIFLRNRLKYALTCDETKKIVMQRLIKIDGKVRTDITYPA 92

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL++D KGRF  H + +EEAK+KLCKV+ V    KG+PY+ T+D 
Sbjct: 93  GFMDVITIEKTGENFRLIFDVKGRFTTHRITNEEAKYKLCKVKKVGIAPKGVPYLVTHDA 152

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT K+D+   KITDFIKFD GN+ M+TGGRN GRVG+I +RE+H GS
Sbjct: 153 RTIRYPDPLIKVNDTTKVDISTGKITDFIKFDSGNVCMITGGRNLGRVGLITHRERHPGS 212

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D LGH FATRL NVF IGKG+KPW+SL KGKGI+L+I EE  KR A + A
Sbjct: 213 FDIVHVKDNLGHTFATRLTNVFVIGKGNKPWISLAKGKGIRLTIAEERDKRIATKQA 269


>gi|50403757|sp|P79183.3|RS4Y1_MACFU RecName: Full=40S ribosomal protein S4, Y isoform 1
 gi|6519826|dbj|BAA87933.1| ribosomal protein S4Y (RPS4Y) [Macaca fuscata]
          Length = 263

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|198285663|gb|ACH85370.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 259

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 21  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P++ T+D 
Sbjct: 81  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHLVTHDA 140

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 141 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 200

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 201 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 258


>gi|336264577|ref|XP_003347065.1| 40S ribosomal protein S4 [Sordaria macrospora k-hell]
 gi|380093082|emb|CCC09319.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 261

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC+PLI+ +RNRLKYAL YRE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSAGPHKLRECMPLIVFVRNRLKYALNYRETKAIMMQRLIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E+FRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGEHFRLIYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K++LE  KI DF+KFD G+I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKINLETGKIEDFVKFDTGSIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  IH++DAL + FATR  NVF IG   KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 205 FNIIHVKDALDNTFATRESNVFVIG-SEKPWISLPKGKGVKLSIAEERDRRRANAIA 260


>gi|296470815|tpg|DAA12930.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
          Length = 263

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI  LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIXFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H +  +EAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|209733632|gb|ACI67685.1| 40S ribosomal protein S4 [Salmo salar]
 gi|209736494|gb|ACI69116.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 263

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 262


>gi|380815402|gb|AFE79575.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATKQSS 262


>gi|354544187|emb|CCE40910.1| hypothetical protein CPAR2_109480 [Candida parapsilosis]
          Length = 264

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 160/237 (67%), Positives = 190/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK RE LPLI+ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPKSSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLIYDVKGRFAVHRISAEEATYKLGKVKRVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND++K+DL   KITDF+KFD G +VMVTGGRN GR+G+I +REKH+G 
Sbjct: 145 RTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG+   KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRAQQG 261


>gi|380815398|gb|AFE79573.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLETHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLAAKQSS 262


>gi|6321997|ref|NP_012073.1| ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae S288c]
 gi|398365603|ref|NP_012679.3| Rps4ap [Saccharomyces cerevisiae S288c]
 gi|338819353|sp|P0CX35.1|RS4A_YEAST RecName: Full=40S ribosomal protein S4-A; AltName: Full=RP5;
           AltName: Full=S7; AltName: Full=YS6
 gi|338819354|sp|P0CX36.1|RS4B_YEAST RecName: Full=40S ribosomal protein S4-B; AltName: Full=RP5;
           AltName: Full=S7; AltName: Full=YS6
 gi|313103666|pdb|3IZB|D Chain D, Localization Of The Small Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
 gi|364506100|pdb|3U5C|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
           Resolution. This Entry Contains Proteins Of The 40s
           Subunit, Ribosome A
 gi|364506138|pdb|3U5G|E Chain E, The Structure Of The Eukaryotic Ribosome At 3.0 A
           Resolution. This Entry Contains Proteins Of The 40s
           Subunit, Ribosome B
 gi|172502|gb|AAA35011.1| ribosomal protein S7 [Saccharomyces cerevisiae]
 gi|172504|gb|AAA35012.1| ribosomal protein S7 [Saccharomyces cerevisiae]
 gi|1015892|emb|CAA89678.1| RPS7B [Saccharomyces cerevisiae]
 gi|2347176|gb|AAB68372.1| Rps7ap: Ribosomal protein S7 [Saccharomyces cerevisiae]
 gi|151944148|gb|EDN62441.1| ribosomal protein S4B [Saccharomyces cerevisiae YJM789]
 gi|151945211|gb|EDN63462.1| ribosomal protein S4A [Saccharomyces cerevisiae YJM789]
 gi|190405978|gb|EDV09245.1| ribosomal protein S4B [Saccharomyces cerevisiae RM11-1a]
 gi|190409613|gb|EDV12878.1| ribosomal protein S4A [Saccharomyces cerevisiae RM11-1a]
 gi|259146964|emb|CAY80220.1| Rps4bp [Saccharomyces cerevisiae EC1118]
 gi|259147610|emb|CAY80861.1| Rps4ap [Saccharomyces cerevisiae EC1118]
 gi|285810109|tpg|DAA06896.1| TPA: ribosomal 40S subunit protein S4B [Saccharomyces cerevisiae
           S288c]
 gi|285813032|tpg|DAA08930.1| TPA: Rps4ap [Saccharomyces cerevisiae S288c]
 gi|349578755|dbj|GAA23920.1| K7_Rps4bp [Saccharomyces cerevisiae Kyokai no. 7]
 gi|349579328|dbj|GAA24491.1| K7_Rps4ap [Saccharomyces cerevisiae Kyokai no. 7]
 gi|392299017|gb|EIW10112.1| Rps4bp [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 261

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQG 260


>gi|225716876|gb|ACO14284.1| 40S ribosomal protein S4, X isoform [Esox lucius]
          Length = 263

 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+ +  G KG+P++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKLLVGTKGVPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNLFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 262


>gi|410080303|ref|XP_003957732.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
 gi|372464318|emb|CCF58597.1| hypothetical protein KAFR_0E04470 [Kazachstania africana CBS 2517]
          Length = 261

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/236 (65%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AI+MQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KVR VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVRKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI+D+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKINDTVKIDLATGKISDYIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KPW+SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|406604840|emb|CCH43715.1| 40S ribosomal protein S4 [Wickerhamomyces ciferrii]
          Length = 243

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+P+
Sbjct: 7   GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDATFPS 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YD KGRF +H + DEEA +KL KV+ V  G++G+PY+ T+DG
Sbjct: 67  GFMDVISLEATNENFRLVYDVKGRFAVHRISDEEASYKLGKVKQVALGKRGVPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DLE  KITDFIKFD G +V VTGGRN GRVG+I +RE+H+G 
Sbjct: 127 RTIRYPDPAIKINDTVKIDLESGKITDFIKFDTGKLVYVTGGRNLGRVGVITHRERHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE R R+ AQ+ 
Sbjct: 187 FDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE-RDRRRAQSG 242


>gi|116193489|ref|XP_001222557.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
 gi|88182375|gb|EAQ89843.1| 40S ribosomal protein S4 [Chaetomium globosum CBS 148.51]
          Length = 262

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 192/238 (80%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DLE  K TDFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLETGKATDFIKFDTGAIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ + F TR  NVF IG   KPW+SLPKGKG+KL+I EE  +++AA  A+
Sbjct: 205 FNIVHLKDAIDNTFTTRESNVFVIG-SEKPWISLPKGKGVKLTIAEERDRKRAATLAS 261


>gi|320163608|gb|EFW40507.1| 40S ribosomal protein S4 [Capsaspora owczarzaki ATCC 30864]
          Length = 263

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 195/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RECLPLI+ LRNRLKYALT++EV  IL QR V VDG+VRTD TYPA
Sbjct: 25  GTWAPRPSTGPHKLRECLPLIVFLRNRLKYALTHQEVKFILAQRLVKVDGRVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+NE FRLLYD KGRF +H +  EEAK+KLCKVR V  G KG+P + T+D 
Sbjct: 85  GFMDVISIEKSNEVFRLLYDVKGRFAVHRITAEEAKYKLCKVRQVSTGAKGVPLLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI AND+++++LE  +I DF+KF+ GN+VM+T GRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPLIGANDSVQVELETGRIIDFVKFETGNLVMITAGRNIGRVGVIVSRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+LGH FATR+GNVF IGKG+K +VSLP+GKG++LSI EE  +R A +A +
Sbjct: 205 FDIVHVKDSLGHSFATRIGNVFVIGKGNKSYVSLPRGKGVRLSIAEERDRRIAEKAKS 262


>gi|408392754|gb|EKJ72074.1| hypothetical protein FPSE_07699 [Fusarium pseudograminearum CS3096]
          Length = 261

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 192/233 (82%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VDGKVRTD T+P+
Sbjct: 25  GTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRTDSTFPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H +++EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|448524476|ref|XP_003871516.1| Rps4a predicted ribosomal protein [Candida orthopsilosis Co 90-125]
 gi|380353338|emb|CCG26094.1| Rps4a predicted ribosomal protein [Candida orthopsilosis]
          Length = 264

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 159/237 (67%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GTYAPKSSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQQHVQVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEATYKLGKVKKVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND++K+DL   KITDF+KFD G +VMVTGGRN GR+G+I +REKH+G 
Sbjct: 145 RTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGKLVMVTGGRNLGRIGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG+   KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLNNVFVIGEEHGKPWVSLPKGKGIKLSITEERDRRRAQQG 261


>gi|46128673|ref|XP_388890.1| hypothetical protein FG08714.1 [Gibberella zeae PH-1]
          Length = 243

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 192/233 (82%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+C+PLI+ +RNRLKYAL YREV AILMQR V VDGKVRTD T+P+
Sbjct: 7   GTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYREVKAILMQRLVKVDGKVRTDSTFPS 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H +++EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 67  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQNEEAEYKLGKVKRVQLGRGGIPFLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +RE+H G 
Sbjct: 127 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHRERHDGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 187 FNIVHVKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 238


>gi|448111276|ref|XP_004201802.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
 gi|359464791|emb|CCE88496.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
          Length = 262

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 159/237 (67%), Positives = 188/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ HV VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI  TNE FRL+YD KGRF +H +  EE  +KL KV+ V  G++G+PY+ T+DG
Sbjct: 85  GFMDVISIDATNEYFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DF+KFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDFVKFDTGKLVMVTGGRNMGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|195128197|ref|XP_002008552.1| GI11752 [Drosophila mojavensis]
 gi|193920161|gb|EDW19028.1| GI11752 [Drosophila mojavensis]
          Length = 261

 Score =  333 bits (853), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR + VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR  Q G KG+P++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGSVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAAK 259


>gi|195377379|ref|XP_002047468.1| GJ13462 [Drosophila virilis]
 gi|194154626|gb|EDW69810.1| GJ13462 [Drosophila virilis]
          Length = 261

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 155/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR + VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR  Q G KG+P++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+ ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLVHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAAK 259


>gi|448117738|ref|XP_004203329.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
 gi|359384197|emb|CCE78901.1| Piso0_000935 [Millerozyma farinosa CBS 7064]
          Length = 262

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 188/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ HV VDGKVRTD TYP 
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I  TNENFRL+YD KGRF +H +  EE  +KL KV+ V  G++GIPY+ T+DG
Sbjct: 85  GFMDVITIDATNENFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI D++KFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTGGRNMGRVGVIAHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|354486732|ref|XP_003505532.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Cricetulus
           griseus]
 gi|344254738|gb|EGW10842.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 262

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPH+ RECLPL + LRNRLKYALT  EV  I MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSSGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRTDVAYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ ENFRL+YDTKGRF +H +  EEAK+KLCKVR V  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++ L+  KITD IKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQISLDTGKITDAIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ + 
Sbjct: 205 FDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSG 262


>gi|322701348|gb|EFY93098.1| ribosomal protein S4 [Metarhizium acridum CQMa 102]
          Length = 261

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 156/233 (66%), Positives = 189/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G + MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|322705490|gb|EFY97075.1| ribosomal protein S4 [Metarhizium anisopliae ARSEF 23]
          Length = 261

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 156/233 (66%), Positives = 189/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+CLPLI+ +RNRLKYAL YRE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPKPSAGPHKLRDCLPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G + MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|157819705|ref|NP_001103082.1| ribosomal protein S4, Y-linked 2 [Rattus norvegicus]
 gi|149048928|gb|EDM01382.1| rCG29848 [Rattus norvegicus]
          Length = 262

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPH+ RECLPL + LRNRLKYALT  EV  I MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRTDVAYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ ENFRL+YDTKGRF +H +  EEAK+KLCKVR V  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++ L+  KITD IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ + 
Sbjct: 205 FDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSG 262


>gi|198285597|gb|ACH85337.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 259

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 21  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P + T+D 
Sbjct: 81  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPALVTHDA 140

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 141 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 200

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 201 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 258


>gi|326512954|dbj|BAK03384.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 270

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 193/237 (81%), Gaps = 4/237 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI++LRNRL+YALT  EV  I+MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSAGPHKLRECLPLIILLRNRLRYALTRTEVTKIVMQRLIKIDGKVRTDGTYPC 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DVV+I KT ENFRLL+DTKGRF +  +  EEAK+KLCKV+ V  G++GIP+I T+DG
Sbjct: 85  GFQDVVTIDKTGENFRLLFDTKGRFVVQPISSEEAKYKLCKVKRVTVGKEGIPFITTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIKAND++KLDLE  KITDF+KFD+G +VMVTGGRN GRVG+I +RE+H GS
Sbjct: 145 RNIRYPDPLIKANDSVKLDLESGKITDFVKFDIGQVVMVTGGRNMGRVGVIVHRERHLGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG----SKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +HI+DA+G+ FATRLGNVF IGK     +K  +SLPK KGIK SI+EEA  R A
Sbjct: 205 FDIVHIKDAVGNTFATRLGNVFVIGKSDGKTTKALISLPKAKGIKKSILEEAAARLA 261


>gi|323308526|gb|EGA61771.1| Rps4ap [Saccharomyces cerevisiae FostersO]
 gi|323354309|gb|EGA86152.1| Rps4ap [Saccharomyces cerevisiae VL3]
          Length = 277

 Score =  332 bits (852), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYPA
Sbjct: 41  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPA 100

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 101 GFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDG 160

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 161 RTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 220

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE  +R+A Q 
Sbjct: 221 FDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQG 276


>gi|195022457|ref|XP_001985577.1| GH17143 [Drosophila grimshawi]
 gi|193899059|gb|EDV97925.1| GH17143 [Drosophila grimshawi]
          Length = 261

 Score =  332 bits (852), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 155/235 (65%), Positives = 190/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR + VDGKVRTD TYPA
Sbjct: 25  GAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR  Q G KG+P++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVRKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+ ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLVHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAAK 259


>gi|241948211|ref|XP_002416828.1| 40S ribosomal protein S4 [Candida dubliniensis CD36]
 gi|223640166|emb|CAX44413.1| 40s ribosomal protein S4 (S7), putative [Candida dubliniensis CD36]
          Length = 262

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK RE LPL++ LRNRLKYAL  REV AI+MQ+HV VDGKVRTD TYPA
Sbjct: 25  GTYAPRQSAGPHKLRESLPLVVFLRNRLKYALNGREVKAIMMQQHVQVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLVYDVKGKFAVHRISAEEASYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|344302425|gb|EGW32699.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
          Length = 262

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ+HV VD KVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDAKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++G+PY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEASYKLGKVKKVQLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K+DL   KI+DFIKFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIKANDTVKIDLATGKISDFIKFDTGRLVMVTGGRNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+  Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRRTQQG 261


>gi|302687328|ref|XP_003033344.1| 40S ribosomal protein S4 [Schizophyllum commune H4-8]
 gi|300107038|gb|EFI98441.1| hypothetical protein SCHCODRAFT_76052 [Schizophyllum commune H4-8]
          Length = 263

 Score =  332 bits (852), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 155/237 (65%), Positives = 186/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE  PL + LRNRLKYALT REV AI+MQR + +DGKVRTD  YP 
Sbjct: 25  GTYAPRPSPGPHKLRESFPLSVFLRNRLKYALTGREVTAIVMQRLIKIDGKVRTDTNYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI K+ E+FRLLYD KGRF +H +  EEA +KLC+VR V  G +G+P+I T+DG
Sbjct: 85  GFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLCRVRKVAIGARGVPHIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+KLDLE  KITDF+KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPAIKVNDTVKLDLETGKITDFVKFDTGNIVMITGGRNMGRSGVIVHREKHIGD 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++DAL   FATRL N+F IG+G+KPW+SLPKGKG KL+I EE   R+  +AA
Sbjct: 205 FDIVHVRDALDRTFATRLSNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKQRAA 261


>gi|222831651|ref|NP_001138538.1| 40S ribosomal protein S4, Y isoform 2 [Macaca mulatta]
 gi|219880801|gb|ACL51674.1| ribosomal protein S4 Y-linked 2 [Macaca mulatta]
          Length = 263

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/235 (64%), Positives = 189/235 (80%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPAGFM
Sbjct: 28  APRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFM 87

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 88  DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKITVGTKGIPHLVTHDARTI 147

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ 
Sbjct: 148 RYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDV 207

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 208 VHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|74205095|dbj|BAE21004.1| unnamed protein product [Mus musculus]
 gi|148678798|gb|EDL10745.1| RIKEN cDNA 1110033J19 [Mus musculus]
          Length = 262

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPH+ RECLPL + LRNRLKYALT  EV  I MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSAGPHRLRECLPLAIFLRNRLKYALTGDEVKKICMQRLIKVDGKVRTDVAYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ ENFRL+YDTKGRF +H +  EEAK+KLCKVR V  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKSGENFRLVYDTKGRFAVHRITPEEAKYKLCKVRKVFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++ L+  KITD IKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQISLDSGKITDAIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ + 
Sbjct: 205 FDVVHVKDANGNGFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSG 262


>gi|342879232|gb|EGU80487.1| hypothetical protein FOXB_08947 [Fusarium oxysporum Fo5176]
          Length = 261

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 190/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE  AILMQR V VDGKVRTD TYP+
Sbjct: 25  GTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKAILMQRLVKVDGKVRTDSTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHVKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|268306408|gb|ACY95325.1| ribosomal protein S4 [Manduca sexta]
          Length = 263

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKV+ V  G K +PY+ T+DG
Sbjct: 85  GFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND+I+LD+   KI DFIKF+ GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTLVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE  KR AA+ A 
Sbjct: 205 FDIVHVRDATGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAAKVAG 262


>gi|340521624|gb|EGR51858.1| hypothetical protein TRIREDRAFT_74568 [Trichoderma reesei QM6a]
          Length = 259

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 155/233 (66%), Positives = 189/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           GL APKPS GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VD KVRTD TYPA
Sbjct: 25  GLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDAKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD GN+ MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGNVAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|255714348|ref|XP_002553456.1| 40S ribosomal protein S4 [Lachancea thermotolerans]
 gi|238934836|emb|CAR23018.1| KLTH0D17248p [Lachancea thermotolerans CBS 6340]
          Length = 261

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 190/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSPGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GRVG I +RE+H+G 
Sbjct: 145 RTLRYPDPNIKVNDTVKIDLASGKITDFIKFDTGKLVYVTGGRNLGRVGSIVHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+ S+P++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEPSRPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|367042184|ref|XP_003651472.1| 40S ribosomal protein S4 [Thielavia terrestris NRRL 8126]
 gi|346998734|gb|AEO65136.1| hypothetical protein THITE_2111827 [Thielavia terrestris NRRL 8126]
          Length = 262

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 190/238 (79%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRETKAILMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++DEEAK+KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQDEEAKYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DLE  KITDFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ + FATR  NVF IG   KPW+SLPKG+G+KL+I EE  +R+A   A 
Sbjct: 205 FGIVHLKDAIDNTFATRESNVFVIGS-EKPWISLPKGRGVKLTIAEERDRRRAHALAG 261


>gi|380815400|gb|AFE79574.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLETHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLATKQSS 262


>gi|259089395|ref|NP_001158523.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
 gi|225704068|gb|ACO07880.1| 40S ribosomal protein S4, X isoform [Oncorhynchus mykiss]
          Length = 263

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 262


>gi|380815404|gb|AFE79576.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLETHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATKQSS 262


>gi|448097249|ref|XP_004198623.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
 gi|359380045|emb|CCE82286.1| Piso0_002004 [Millerozyma farinosa CBS 7064]
          Length = 262

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 188/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ H+ VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHIKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI  TNE FRL+YD KGRF +H +  EE  +KL KV+ V  G++GIPY+ T+DG
Sbjct: 85  GFMDVISIDSTNEYFRLIYDVKGRFAVHRITAEEGAYKLGKVKKVVLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI D++KFD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIDDYVKFDTGKLVMVTGGRNMGRVGVIAHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGNEAGKPWVSLPKGKGIKLSISEERDRRRAQQG 261


>gi|91083095|ref|XP_969262.1| PREDICTED: similar to ribosomal protein S4e [Tribolium castaneum]
 gi|270006993|gb|EFA03441.1| hypothetical protein TcasGA2_TC013431 [Tribolium castaneum]
          Length = 261

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/236 (66%), Positives = 191/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KGIP++ T DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCKVKKVQTGPKGIPFLVTRDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+L++  +KI DFIKF+ GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DA GH FATRL NVF IGKGSKP+VSLP+GKG+KLSI EE  KR AA+ 
Sbjct: 205 FDIVHIKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVKLSIAEERDKRLAAKT 260


>gi|406606082|emb|CCH42555.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
          Length = 261

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ V  G++G+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRISDEEASYKLGKVKQVALGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DLE  KI+DFIKFD G +V VTGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPAIKINDTVKIDLESGKISDFIKFDTGKLVYVTGGRNLGRVGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE R R+ AQ+ 
Sbjct: 205 FDLVHIKDSLENTFVTRLQNVFVIGEPGKPYISLPKGKGIKLSISEE-RDRRRAQSG 260


>gi|223646190|gb|ACN09853.1| 40S ribosomal protein S4 [Salmo salar]
 gi|223672037|gb|ACN12200.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 263

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P + T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPALVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLPIAEERDKRIAAKAGS 262


>gi|50303511|ref|XP_451697.1| 40S ribosomal protein S4 [Kluyveromyces lactis NRRL Y-1140]
 gi|49640829|emb|CAH02090.1| KLLA0B03652p [Kluyveromyces lactis]
          Length = 261

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/236 (66%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+PA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL    ITDFIKFD G +V VTGGRN GRVG I +RE+H+G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  +PW+SLPKGKGIKL+I EE  +R+A   
Sbjct: 205 FDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQHG 260


>gi|125979105|ref|XP_001353585.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
 gi|195161167|ref|XP_002021441.1| GL25330 [Drosophila persimilis]
 gi|54642349|gb|EAL31098.1| GA10883 [Drosophila pseudoobscura pseudoobscura]
 gi|194118554|gb|EDW40597.1| GL25330 [Drosophila persimilis]
          Length = 261

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 190/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GAFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GFMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKNQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKGSKP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGSKPYISLPKGKGVKLSISEERDKRLAAK 259


>gi|225703238|gb|ACO07465.1| 40S ribosomal protein S4 [Oncorhynchus mykiss]
          Length = 263

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 262


>gi|402223625|gb|EJU03689.1| 40S ribosomal protein S4 [Dacryopinax sp. DJM-731 SS1]
          Length = 244

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 188/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL++ LRNRLKYALT REV +I+MQR + VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSPGPHKLRECLPLVIFLRNRLKYALTGREVNSIVMQRLIKVDGKVRTDTTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++ K+ E+FRLLYD KGRF +H +  EEA +KL KV+ +  G KG+PYI T+DG
Sbjct: 67  GFMDVITLEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVKKLAIGAKGVPYIVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K DLE  KI DF+KFD GN+ ++TGGRN GRVG I +REKH G 
Sbjct: 127 RTIRYPDPLIKVNDTVKFDLETGKIVDFVKFDTGNVAVITGGRNMGRVGTIVHREKHIGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D L  +FATR+GN+F +G+G KPWVSLPKGKG+KLSI EE   R+  + A 
Sbjct: 187 FDIVHVKDVLDRDFATRIGNIFVVGEGVKPWVSLPKGKGVKLSIAEERDVRRKQREAV 244


>gi|358393591|gb|EHK42992.1| hypothetical protein TRIATDRAFT_300975 [Trichoderma atroviride IMI
           206040]
          Length = 259

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 190/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           GL APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VDGKVRTD TYPA
Sbjct: 25  GLYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GYMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G + MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|410077092|ref|XP_003956128.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
 gi|372462711|emb|CCF56993.1| hypothetical protein KAFR_0B06960 [Kazachstania africana CBS 2517]
          Length = 261

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AI+MQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KVR VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVRKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI+++IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKINDTVKIDLATGKISEYIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KPW+SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLSNVFVIGEPGKPWISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|400596580|gb|EJP64351.1| ribosomal family S4e [Beauveria bassiana ARSEF 2860]
          Length = 259

 Score =  331 bits (849), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 153/233 (65%), Positives = 190/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE  +ILMQR V VDGKVRTD TYPA
Sbjct: 25  GVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETRSILMQRLVKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDF+KFD G I MVTGGRN GR+G+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGAIAMVTGGRNMGRIGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+S+PKGKG+KL+I EE  +R+A
Sbjct: 205 FAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISIPKGKGVKLTIAEERDRRRA 256


>gi|145355247|ref|XP_001421876.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
 gi|144582115|gb|ABP00170.1| Ribosomal protein S4, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
          Length = 253

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 153/227 (67%), Positives = 185/227 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHKSRECLPL L+LRNRLKYALTY+EV  ILMQR V VDGK+R DK YP 
Sbjct: 25  GVFAPKPSPGPHKSRECLPLCLILRNRLKYALTYKEVTTILMQRVVKVDGKIRMDKCYPC 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVVSI K++E+FRL+YD KGRF +H +   EA++KLCKV+S + G KG+P +  +DG
Sbjct: 85  GIMDVVSIEKSDEHFRLIYDNKGRFVVHRIEAIEAQYKLCKVKSKKLGDKGVPCVGLHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK  D++ +D+  NKITDF+KFDVG + M+TGGRN GRVG+I+ REKH GS
Sbjct: 145 RTIRYPDPLIKEGDSVMVDIATNKITDFVKFDVGALCMITGGRNAGRVGVIQRREKHIGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           FE +H++DA G EFATR  NVF IG GSKP +SLPKGKGIKLSI++E
Sbjct: 205 FEIVHLKDAAGQEFATRATNVFAIGTGSKPMISLPKGKGIKLSIVDE 251


>gi|194870273|ref|XP_001972620.1| GG15623 [Drosophila erecta]
 gi|190654403|gb|EDV51646.1| GG15623 [Drosophila erecta]
          Length = 261

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAAK 259


>gi|325184655|emb|CCA19147.1| 40S ribosomal protein S4 putative [Albugo laibachii Nc14]
          Length = 261

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/232 (66%), Positives = 187/232 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RECLPLI++LRNRLKYALT +EV  I MQ+ V VDGK+R D  +PA
Sbjct: 25  GVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKAVKVDGKIRVDPNFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD+V IPK+ + FRLLYDTKGRF LH +  EE K+KLCKV   ++ +KGIPY+ T DG
Sbjct: 85  GFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCKVIRQEYTKKGIPYVATNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K+NDT+K+DLE  KI DFIKF+ GN+VMVT GRN G VG++   E+H+GS
Sbjct: 145 RTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTRGRNTGIVGMLHQIERHEGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           F    I+D+ GHEFATRLGNVF IG GS+PW+SLPKGKGIKLSI+EE   R+
Sbjct: 205 FSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPKGKGIKLSILEERSVRE 256


>gi|302918408|ref|XP_003052651.1| 40S ribosomal protein S4 [Nectria haematococca mpVI 77-13-4]
 gi|256733591|gb|EEU46938.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 261

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/237 (64%), Positives = 191/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE  +ILMQR V VDGKVRTD TYP+
Sbjct: 25  GTYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETKSILMQRLVKVDGKVRTDSTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G +VMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A   A
Sbjct: 205 FNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRRRAYAIA 260


>gi|367021618|ref|XP_003660094.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
           42464]
 gi|347007361|gb|AEO54849.1| hypothetical protein MYCTH_2297948 [Myceliophthora thermophila ATCC
           42464]
          Length = 262

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 191/238 (80%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H +++EEAK+KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQEEEAKYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DLE  KITDFIKFD G I M+TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGAIAMITGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ + F TR  NVF IG   KPWVSLPKGKG+KL+I EE R R+ AQA A
Sbjct: 205 FGIVHLKDAIDNTFTTRESNVFVIGT-DKPWVSLPKGKGVKLTIAEE-RDRRRAQALA 260


>gi|196005203|ref|XP_002112468.1| conserved hypothetical protein [Trichoplax adhaerens]
 gi|190584509|gb|EDV24578.1| conserved hypothetical protein [Trichoplax adhaerens]
          Length = 263

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 189/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL + +RNRLKYALTY EV  I+ QR + +DGKVRTD TYPA
Sbjct: 25  GSFAPRPSCGPHKFRECLPLAIFMRNRLKYALTYDEVKKIVKQRLIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRLLYD KGRF +H +  EEA +KLCKV+ +Q G KGIPY  T+D 
Sbjct: 85  GFMDVIAIEKTGENFRLLYDAKGRFTVHRITPEEASYKLCKVKQLQIGAKGIPYAVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDTIK+DL+  KITDF+KFD GN VM  GGRN GR+G+I +RE+H GS
Sbjct: 145 RTIRYPDPLVKVNDTIKVDLKSGKITDFLKFDSGNQVMAIGGRNMGRIGVITHRERHSGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR-QAAQA 282
           F+ +H++DA G+ FATRL NVF IGKG+KP+VSLP+GKGI+L+I EE  KR Q  Q+
Sbjct: 205 FDIVHVKDAQGNAFATRLTNVFVIGKGTKPYVSLPRGKGIRLTIAEERDKRLQGKQS 261


>gi|367012660|ref|XP_003680830.1| 40S ribosomal protein S4 [Torulaspora delbrueckii]
 gi|359748490|emb|CCE91619.1| hypothetical protein TDEL_0D00350 [Torulaspora delbrueckii]
          Length = 261

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 158/236 (66%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD T+PA
Sbjct: 25  GCYAPRPSQGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPYI T+DG
Sbjct: 85  GFMDVISLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK ND++K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKINDSVKIDLASGKITDFIKFDTGKLVFVTGGRNLGRIGTIIHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIKLSIAEERDRRRAQQG 260


>gi|74844658|sp|Q95V34.1|RS4_SPOFR RecName: Full=40S ribosomal protein S4
 gi|16566725|gb|AAL26580.1|AF429978_1 ribosomal protein S4 [Spodoptera frugiperda]
          Length = 263

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNE FRL+YD KGRF +H +  EEAK+KLCKV+ V  G K +P++ T+DG
Sbjct: 85  GFMDVVSIEKTNELFRLIYDVKGRFTVHRITPEEAKYKLCKVKRVSTGPKNVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND+++LD+  +KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDSVQLDIATSKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKG++L+I EE  KR AA+ A 
Sbjct: 205 FDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGVRLTIAEERDKRIAAKVAG 262


>gi|209736960|gb|ACI69349.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 263

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P + T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPALVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT+  KFD GN+ MVTGG N GR+GII NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLATGKITEHTKFDTGNLCMVTGGANLGRIGIITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+A +
Sbjct: 205 FDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAKAGS 262


>gi|390600199|gb|EIN09594.1| 40S ribosomal protein S4 [Punctularia strigosozonata HHB-11173 SS5]
          Length = 263

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 157/239 (65%), Positives = 185/239 (77%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL++ LRNRLKYAL  REV AI+MQR + VDGKVRTD TYP 
Sbjct: 25  GTYAPRPSPGPHKLRESLPLMIFLRNRLKYALNGREVTAIVMQRLIKVDGKVRTDATYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G KG+PYI T+DG
Sbjct: 85  GFMDVVTIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVRKVAVGSKGVPYIITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IKANDT+K D E+NKI DF+ F+ GNIVMVTGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPAIKANDTVKFDFEQNKIVDFVHFETGNIVMVTGGRNMGRAGVIVHREKHVGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQAAQAA 283
           F+ +H++D L   FATR+ N+F IG+G KPWVSLP+GKG KLSI EE   R+RQ A  A
Sbjct: 205 FDIVHVKDTLDRTFATRISNIFVIGEGIKPWVSLPRGKGTKLSIAEERDVRRRQRAAEA 263


>gi|336368345|gb|EGN96688.1| hypothetical protein SERLA73DRAFT_184826 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336381154|gb|EGO22306.1| hypothetical protein SERLADRAFT_472969 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 263

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 153/237 (64%), Positives = 186/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL + LRNRLKYALT REV +I+ QR + VDGKVRTD TYP 
Sbjct: 25  GTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGREVTSIVKQRLIKVDGKVRTDATYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD +SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G KG+P++ T+DG
Sbjct: 85  GFMDTISIEKSGEHFRLLYDVKGRFTIHRITAEEASYKLLKVRKVALGAKGVPHVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIK DLE+ KI DF+KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPLIKVNDTIKFDLEQGKIIDFVKFDTGNIVMITGGRNMGRAGVIVHREKHIGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D+L   FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE   R+  +AA
Sbjct: 205 FDIVHVKDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTKLTISEERDVRRRQRAA 261


>gi|242024748|ref|XP_002432788.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
 gi|212518297|gb|EEB20050.1| 40S ribosomal protein S4, putative [Pediculus humanus corporis]
          Length = 245

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 192/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 7   GVYAPRPSAGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKIRTDPNYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K NE FRL+YD KGRF +H +  +EA +KLCKV+ VQ G KG+P++ T+DG
Sbjct: 67  GFMDVISIEKINELFRLIYDVKGRFTIHRITPDEATYKLCKVKKVQTGPKGVPFLVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+L++  +KI DFIKF+ GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRNLGRVGTVVNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+D  GH FATRL NVF IGKGSK +VSLP+GKG+KLS+ EE  KR AA+AA+
Sbjct: 187 FDIVHIKDTQGHTFATRLNNVFIIGKGSKAYVSLPRGKGVKLSVAEERDKRLAAKAAS 244


>gi|195494033|ref|XP_002094667.1| RpS4 [Drosophila yakuba]
 gi|194180768|gb|EDW94379.1| RpS4 [Drosophila yakuba]
          Length = 261

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MD++++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAAK 259


>gi|74829226|sp|Q56FH2.1|RS4_LYSTE RecName: Full=40S ribosomal protein S4
 gi|62083411|gb|AAX62430.1| ribosomal protein S4 [Lysiphlebus testaceipes]
          Length = 262

 Score =  330 bits (846), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 190/237 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV  I MQR + VDGKVRTD  YP 
Sbjct: 25  GVYAPRPSTGPHKLRECLPLLIFLRNRLKYALTNCEVTKITMQRLIKVDGKVRTDSNYPL 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KGRF +H + +EEAK+KLCKVR VQ G KG+P++ T+DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDVKGRFSIHRISNEEAKYKLCKVRRVQTGPKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP+IK NDTI+L++  NKI D IKFD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+  HI+D+ GH FATR+ NVF IGKGSK +VSLP+GKG+KLSI EE  KR AA+ A
Sbjct: 205 FDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAAKGA 261


>gi|342356395|gb|AEL28856.1| ribosomal protein S4 [Heliconius melpomene cythera]
          Length = 263

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 193/238 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV+ I+ QR + VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE FRL+YD KGRF +H +  EEAK+KLCKVR V  G K +PY+ T+DG
Sbjct: 85  GFMDVISIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRHVGTGPKNVPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLIK ND+++LD+   +I DFIKF+ GN+ M+TGGRN GRVG I +RE+H GS
Sbjct: 145 RTLRYPDPLIKVNDSVQLDIASARIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE  KR AA+ AA
Sbjct: 205 FDIVHVRDSSGHTFATRLHNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAAKQAA 262


>gi|194750067|ref|XP_001957453.1| GF24027 [Drosophila ananassae]
 gi|190624735|gb|EDV40259.1| GF24027 [Drosophila ananassae]
          Length = 261

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KL+I EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLTISEERDKRLAAK 259


>gi|440893161|gb|ELR46038.1| hypothetical protein M91_16118, partial [Bos grunniens mutus]
          Length = 273

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 155/235 (65%), Positives = 187/235 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL + LRNRLKYALT  EV  I MQR   +DGKV TD TYPA
Sbjct: 38  GVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDEVKKICMQRFTKIDGKVCTDITYPA 97

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENF L+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 98  GFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 157

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK N TI++DLE  KITDFIKFD GN+ MVTGG + GR+G+I NRE+H GS
Sbjct: 158 RTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVITNRERHPGS 217

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F  GKG+KPW+SLP+GKGI L+I EE  KR AA+
Sbjct: 218 FDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDKRLAAK 272


>gi|260949501|ref|XP_002619047.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
 gi|238846619|gb|EEQ36083.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
          Length = 262

 Score =  330 bits (845), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 187/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ HV VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H +  EE  +KL KV+ +  G+K IPY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGKVKKIALGKKAIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ANDT+K+DL   KITDFIKFD G +VMVTGG+N GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGRVGVIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TR  NVF +G +  KPWVSLPKGKGIKLSI EE  +R+A Q 
Sbjct: 205 FDLVHIKDALDNTFVTRQSNVFVVGTEAGKPWVSLPKGKGIKLSIAEERDRRRAQQG 261


>gi|24663668|ref|NP_729871.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
 gi|24663672|ref|NP_524053.2| ribosomal protein S4, isoform B [Drosophila melanogaster]
 gi|195327307|ref|XP_002030362.1| GM25394 [Drosophila sechellia]
 gi|195589999|ref|XP_002084736.1| GD14426 [Drosophila simulans]
 gi|76803819|sp|P41042.2|RS4_DROME RecName: Full=40S ribosomal protein S4
 gi|7294504|gb|AAF49846.1| ribosomal protein S4, isoform B [Drosophila melanogaster]
 gi|7294505|gb|AAF49847.1| ribosomal protein S4, isoform A [Drosophila melanogaster]
 gi|40882499|gb|AAR96161.1| RE57333p [Drosophila melanogaster]
 gi|194119305|gb|EDW41348.1| GM25394 [Drosophila sechellia]
 gi|194196745|gb|EDX10321.1| GD14426 [Drosophila simulans]
 gi|220959550|gb|ACL92318.1| RpS4-PA [synthetic construct]
          Length = 261

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI AND++++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAAK 259


>gi|388452714|ref|NP_001252674.1| ribosomal protein S4, Y-linked 1 [Macaca mulatta]
 gi|387539378|gb|AFJ70316.1| 40S ribosomal protein S4, Y isoform 1 Y isoform [Macaca mulatta]
          Length = 263

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATKQSS 262


>gi|358384887|gb|EHK22484.1| hypothetical protein TRIVIDRAFT_84016 [Trichoderma virens Gv29-8]
          Length = 259

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 188/233 (80%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           GL APKPS GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VD KVRTD TYPA
Sbjct: 25  GLYAPKPSPGPHKLRDCMPLIVFIRNRLKYALNYRETKAIMMQRLVKVDAKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G + MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAVAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|296484630|tpg|DAA26745.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
          Length = 263

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL + LRNRLKYALT  EV  I MQR   +DGKV TD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLFIFLRNRLKYALTGDEVKKICMQRFTKIDGKVCTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENF L+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK N TI++DLE  KITDFIKFD GN+ MVTGG + GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNGTIQIDLETGKITDFIKFDTGNLCMVTGGASLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F  GKG+KPW+SLP+GKGI L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVFGKGNKPWISLPRGKGICLTIAEERDKRLAAKQSS 262


>gi|156362157|ref|XP_001625647.1| predicted protein [Nematostella vectensis]
 gi|156212490|gb|EDO33547.1| predicted protein [Nematostella vectensis]
          Length = 263

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYAL   EV  I+ QR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALNGEEVKKIVKQRLIKIDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT ENFRLLYD KGRF +H +  EEAK+KL +VR V  G KG+PYI T+D 
Sbjct: 85  GFMDVVTIDKTGENFRLLYDVKGRFAVHRITAEEAKYKLGRVRRVDVGAKGVPYIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+ +D++  K+ D+IKFD GN+ MV GGRN GRVG++ +REKH GS
Sbjct: 145 RTIRYPDPNIKVNDTVVIDIKTGKVIDYIKFDTGNMAMVVGGRNMGRVGMVTHREKHAGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++DA GH+FATRL N+F IGKG+KP+VSLPKGKG++LSI EE  +R A +A
Sbjct: 205 FDIVHVKDATGHQFATRLTNIFVIGKGNKPYVSLPKGKGVRLSIAEERDRRIAEKA 260


>gi|133777261|gb|AAI00907.1| RPS4Y1 protein [Homo sapiens]
          Length = 262

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE  KR AA+ ++
Sbjct: 204 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAAKQSS 261


>gi|72533642|gb|AAI00906.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
          Length = 263

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 191/238 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLAAKQSS 262


>gi|365986130|ref|XP_003669897.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
 gi|343768666|emb|CCD24654.1| hypothetical protein NDAI_0D03400 [Naumovozyma dairenensis CBS 421]
          Length = 261

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYP 
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITD+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|195428307|ref|XP_002062215.1| GK17425 [Drosophila willistoni]
 gi|194158300|gb|EDW73201.1| GK17425 [Drosophila willistoni]
          Length = 261

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 154/235 (65%), Positives = 191/235 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFTIHRISAEEAKYKLCKVKKNQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI ANDT+++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDTVQVDIATGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSISEERDKRLAAK 259


>gi|403419501|emb|CCM06201.1| predicted protein [Fibroporia radiculosa]
          Length = 290

 Score =  329 bits (844), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 186/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL + LRNRLKYALT +EV +I+MQR + VD KVRTD TYPA
Sbjct: 52  GTYAPRPSPGPHKLRECLPLTIFLRNRLKYALTGKEVTSIVMQRLIKVDAKVRTDPTYPA 111

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR +  G KG+PYI T+DG
Sbjct: 112 GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKMAIGNKGVPYIVTHDG 171

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K DLE+ KI DF+KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 172 RTIRYPDPAIKVNDTVKFDLEQGKIVDFVKFDTGNIVMITGGRNMGRAGVIVHREKHIGG 231

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D+L   FATR+ N+F +G+G KPW+SLPKGKG KL+I EE   R+  +AA
Sbjct: 232 FDIVHVKDSLDRTFATRISNIFVLGEGIKPWISLPKGKGTKLTITEERDVRRRQRAA 288


>gi|366987631|ref|XP_003673582.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
 gi|342299445|emb|CCC67199.1| hypothetical protein NCAS_0A06410 [Naumovozyma castellii CBS 4309]
          Length = 261

 Score =  329 bits (844), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYP 
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITD+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|70909489|emb|CAJ17169.1| ribosomal protein S4e [Sphaerius sp. APV-2005]
          Length = 262

 Score =  329 bits (844), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 158/237 (66%), Positives = 193/237 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVKKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT+E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G +GIP++ T+DG
Sbjct: 85  GFMDVVTIEKTSEFFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVQTGPRGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+L++  +KI D IKF+ GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTIQLEIATSKIMDSIKFESGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+ GH FATRL NVF IGKGSK +VSLP+GKG+KLSI EE  KR AA+AA
Sbjct: 205 FDIVHIKDSQGHIFATRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAAKAA 261


>gi|170285559|emb|CAM34499.1| putative ribosomal protein S4 [Cotesia congregata]
          Length = 262

 Score =  329 bits (844), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 156/236 (66%), Positives = 190/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV  I+MQR + +D KVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNSEVTKIVMQRLIKIDSKVRTDINYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G KGIP+I T+DG
Sbjct: 85  GFMDVITIEKTGEYFRLIYDVKGRFAVHRITAEEAKYKLCKVRKVQTGPKGIPFIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+L++  +KI D I+F+ GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTIQLEIATSKILDSIRFEPGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+D+ GH FATRL NVF IGKG+KP+VSLP+GKGIKLSI EE  KR AA+ 
Sbjct: 205 FDICHIKDSQGHTFATRLNNVFIIGKGAKPYVSLPRGKGIKLSIAEERDKRLAAKG 260


>gi|219880799|gb|ACL51673.1| ribosomal protein S4 Y-linked 1, partial [Macaca mulatta]
          Length = 259

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 151/235 (64%), Positives = 188/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVYAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR A +
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATK 259


>gi|149712494|ref|XP_001498885.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Equus
           caballus]
          Length = 263

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+ S+ PHK RECLP+++ LRNRLKY LT  EV  I M+R V +DGKVRTD TYPA
Sbjct: 25  GVFAPRSSTRPHKLRECLPVVIFLRNRLKYGLTGDEVKKICMRRFVKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR    G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKTFVGPKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE++ GS
Sbjct: 145 RTIRYPDPLIKVNDTIRIDLETGKITDFIKFDAGNVCMVTGGANLGRIGVITNRERYPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FE +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE   R A + ++
Sbjct: 205 FEVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDVRLATKQSS 262


>gi|57113929|ref|NP_001009024.1| 40S ribosomal protein S4, Y isoform 2 [Pan troglodytes]
 gi|51316604|sp|Q6GVM7.3|RS4Y2_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 2
 gi|48728364|gb|AAT46348.1| RPS4Y2 [Pan troglodytes]
 gi|410308434|gb|JAA32817.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
 gi|410353921|gb|JAA43564.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
          Length = 263

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|366997558|ref|XP_003678541.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
 gi|342304413|emb|CCC72204.1| hypothetical protein NCAS_0J02250 [Naumovozyma castellii CBS 4309]
          Length = 261

 Score =  329 bits (843), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYP 
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLDATNENFRLVYDVKGRFAVHRITDEEATYKLAKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITD+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|440894131|gb|ELR46663.1| hypothetical protein M91_05049, partial [Bos grunniens mutus]
          Length = 258

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI  LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 21  GVFAPRPSTGPHKLRECLPLITFLRNRLKYALTGDEVKKICMQHFIKIDGKVRTDITYPA 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+ DTKGRF +H +  +EAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 81  GFMDVIGIDKTGENFRLICDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDA 140

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 141 RAIRYPDPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHLGS 200

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FAT+L N+F  GKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 201 FDVVHVKDANGNSFATQLSNIFVTGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 258


>gi|366998792|ref|XP_003684132.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
 gi|366999745|ref|XP_003684608.1| 40S ribosomal protein S4 [Tetrapisispora phaffii CBS 4417]
 gi|357522428|emb|CCE61698.1| hypothetical protein TPHA_0B00260 [Tetrapisispora phaffii CBS 4417]
 gi|357522905|emb|CCE62174.1| hypothetical protein TPHA_0C00170 [Tetrapisispora phaffii CBS 4417]
          Length = 261

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 190/237 (80%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AI+MQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKINDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE R R+ AQ+ 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEPGKPFISLPKGKGIKLSISEE-RDRRRAQSG 260


>gi|403302644|ref|XP_003941964.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 1
           [Saimiri boliviensis boliviensis]
 gi|403302646|ref|XP_003941965.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 2
           [Saimiri boliviensis boliviensis]
 gi|403302648|ref|XP_003941966.1| PREDICTED: 40S ribosomal protein S4, X isoform-like isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 263

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 188/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  + MQ  + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKVCMQWFIKIDGKVRADITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  ENF L+YDTKGRF +  +  EEAK KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKMGENFHLIYDTKGRFAVRRITPEEAKHKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ NDTI+ DLE  KITDFIKFD GN+ MVTGG N GR G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIRVNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRTGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|320586588|gb|EFW99258.1| 40S ribosomal protein s4 [Grosmannia clavigera kw1407]
          Length = 259

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 188/235 (80%), Gaps = 1/235 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APK S GPHKSRECLPLI+ LRNRLKYAL YRE  AIL+QR + VD KVRTD TYP 
Sbjct: 25  GVYAPKASPGPHKSRECLPLIIFLRNRLKYALNYRETKAILLQRLIKVDHKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KVR VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVRRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDF+KFD G + M+TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFVKFDTGALAMITGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F  +H++DA+ + FATR  NVF IG   KPW+SLPKG+G+KL+I EE  +R+AAQ
Sbjct: 205 FNIVHLKDAIDNTFATRESNVFVIGT-EKPWISLPKGRGVKLTIAEERDRRRAAQ 258


>gi|227937267|gb|ACP43279.1| ribosomal protein S4 Y-linked 2 [Gorilla gorilla]
          Length = 263

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAARQSS 262


>gi|50550587|ref|XP_502766.1| 40S ribosomal protein S4 [Yarrowia lipolytica]
 gi|6094184|sp|O59950.1|RS4_YARLI RecName: Full=40S ribosomal protein S4; AltName: Full=S7
 gi|2997729|gb|AAC08586.1| ribosomal protein S7 [Yarrowia lipolytica]
 gi|49648634|emb|CAG80954.1| YALI0D12903p [Yarrowia lipolytica CLIB122]
          Length = 260

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 157/235 (66%), Positives = 188/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK RE LPL++ LRNRLKYAL  REV AILMQR V VDGKVRTD T+PA
Sbjct: 25  GTYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVNAILMQRLVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ + KT ENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVIQLEKTGENFRLVYDVKGRFAVHRITDEEAAYKLGKVKRVQVGKKGIPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KIT F+KF+ GNIVM TGGRN GRVG I +RE+H+G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+DAL ++F TRL NVF IG+G+K  +SLPKGKGIKLSI EE   R+A Q
Sbjct: 205 FDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDARRAKQ 259


>gi|50287861|ref|XP_446360.1| 40S ribosomal protein S4 [Candida glabrata CBS 138]
 gi|49525667|emb|CAG59284.1| unnamed protein product [Candida glabrata]
          Length = 261

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AI+MQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAIMMQRHVKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTDDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITD+IKFD+G +V +TGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLASGKITDYIKFDIGKLVYITGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHVKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|340975701|gb|EGS22816.1| 40S ribosomal protein S4-like protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 264

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/227 (66%), Positives = 185/227 (81%), Gaps = 1/227 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+C+PLI+ +RNRLKYAL YRE  AI+MQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSTGPHKLRDCMPLIVFVRNRLKYALNYRETKAIMMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H + DEEAK+KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRITDEEAKYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DLE  KITDFIKFD G + M+TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLETGKITDFIKFDTGALAMITGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F  +H++DAL + FATR  NVF IG   KPW+SLPKGKG+KL+I EE
Sbjct: 205 FGIVHLKDALDNTFATRESNVFVIGS-EKPWISLPKGKGVKLTIAEE 250


>gi|70909487|emb|CAJ17168.1| ribosomal protein S4e [Mycetophagus quadripustulatus]
          Length = 261

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 157/236 (66%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KGIP++ T DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDVKGRFTIHRITGEEAKYKLCKVKKVQTGPKGIPFLVTRDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDTI+L++  +KI DFIKFD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPNIKVNDTIQLEIATSKILDFIKFDSGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
            + +H++DA GH FATRL NVF IGKGSKP+VSLP+GKG+KLSI EE  KR AA+ 
Sbjct: 205 VDIVHVKDANGHTFATRLNNVFIIGKGSKPYVSLPRGKGVKLSIAEERDKRLAAKT 260


>gi|242211537|ref|XP_002471606.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
 gi|220729282|gb|EED83159.1| 40S ribosomal protein S4 [Postia placenta Mad-698-R]
          Length = 263

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 189/237 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYAL  +EVI+I+ QR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALNGKEVISIVAQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I K+ E+FRLLYD KGRF +H +  EEA +KL KVR +  G KG+PYI T+DG
Sbjct: 85  GFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKMAIGTKGVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K DLE++KI D++KFD GN+VM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPLIKVNDTVKFDLEQSKILDYVKFDTGNLVMITGGRNMGRAGVIVHREKHIGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D+L   FATR+ N+F +G+G+KPWVSLPKGKGIKL+I EE   R+  +AA
Sbjct: 205 FDIVHVKDSLDRTFATRISNIFVLGEGTKPWVSLPKGKGIKLTITEERDVRRRQRAA 261


>gi|346325391|gb|EGX94988.1| ribosomal protein S4 [Cordyceps militaris CM01]
          Length = 258

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/233 (64%), Positives = 189/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK R+C+PLI+ +RNRLKYAL YRE  +ILMQR + VDGKVRTD TYPA
Sbjct: 25  GVYAPKPSAGPHKLRDCMPLIVFIRNRLKYALNYRETRSILMQRLIKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDF+KFD G I MVTGGRN GR+G+I +RE+H G 
Sbjct: 145 RTIRYPDPSIKVNDTVKIDLATGKITDFVKFDTGAIAMVTGGRNMGRIGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+S+PKGKG+KL+I EE  +R+A
Sbjct: 205 FAIVHIKDAIDNTFATRESNVFVIGQ-DKPWISVPKGKGVKLTIAEERDRRRA 256


>gi|289741733|gb|ADD19614.1| ribosomal protein S4 [Glossina morsitans morsitans]
          Length = 243

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR + VDGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRESLPLMIFLRNRLKYALNGAEVTKIVMQRLIKVDGKVRTDPTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR  Q G KG+P+I T+DG
Sbjct: 67  GFMDVITIEKTGEYFRLIYDVKGRFTIHRISPEEAKYKLCKVRKTQLGAKGVPFIVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+++D+   KI DFIKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 127 RTIRYPDPLIKANDTVQVDIATGKIIDFIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+ GH FATRL NVF IGK ++ ++SLPK  G+KLSI EE  KR AA+A
Sbjct: 187 FDIVHIKDSQGHIFATRLSNVFIIGKSTRSYISLPKDLGVKLSIAEERDKRLAAKA 242


>gi|4506727|ref|NP_000999.1| 40S ribosomal protein S4, Y isoform 1 [Homo sapiens]
 gi|133948|sp|P22090.2|RS4Y1_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 1
 gi|7959921|gb|AAF71131.1|AF116721_111 PRO2646 [Homo sapiens]
 gi|337512|gb|AAA63256.1| ribosomal protein S4Y isoform [Homo sapiens]
 gi|2791859|gb|AAB96967.1| ribosomal protein s4 Y isoform [Homo sapiens]
 gi|16307477|gb|AAH10286.1| Ribosomal protein S4, Y-linked 1 [Homo sapiens]
 gi|119623176|gb|EAX02771.1| ribosomal protein S4, Y-linked 1, isoform CRA_b [Homo sapiens]
 gi|123981388|gb|ABM82523.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
 gi|123996231|gb|ABM85717.1| ribosomal protein S4, Y-linked 1 [synthetic construct]
 gi|158259099|dbj|BAF85508.1| unnamed protein product [Homo sapiens]
 gi|227937265|gb|ACP43278.1| ribosomal protein S4 Y-linked 1 [Gorilla gorilla]
          Length = 263

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSS 262


>gi|378728164|gb|EHY54623.1| 40S ribosomal protein S4 [Exophiala dermatitidis NIH/UT8656]
          Length = 264

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/237 (66%), Positives = 186/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK+R+CLPLI+ LRNRLKY+L  RE  AILMQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPKASPGPHKTRDCLPLIIFLRNRLKYSLNNRETTAILMQRLIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +   EA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRIEQAEAEYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFI+FD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIRFDTGVIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IGK  KPWVSLPKGKG+KLSI EE  +R+A Q A
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFIIGK-EKPWVSLPKGKGVKLSIAEERDRRRAVQLA 260


>gi|225680007|gb|EEH18291.1| 40S ribosomal protein S4-A [Paracoccidioides brasiliensis Pb03]
 gi|226291789|gb|EEH47217.1| 40S ribosomal protein S4 [Paracoccidioides brasiliensis Pb18]
          Length = 262

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPL++ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARETNAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KIT FIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFIIGQ-EKPWISLPKGKGVKLSIAEERDRRRAVALAG 261


>gi|395326662|gb|EJF59069.1| 40S ribosomal protein S4 [Dichomitus squalens LYAD-421 SS1]
          Length = 261

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 188/237 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTSIVQQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G +G+PYI T+DG
Sbjct: 85  GFMDVITIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKVAIGNRGVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT++ D+++ KITDF+KFD GN+V +TGGRNRGR G+I +REKH G 
Sbjct: 145 RTIRYPDPVIKVNDTVRFDIDQGKITDFVKFDTGNLVFITGGRNRGRAGVITHREKHVGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++D+L   FATR+ N+F IG+G+K WVSLPKGKGIKL+I EE   R+  +AA
Sbjct: 205 FDIVHVKDSLDRTFATRISNIFVIGEGTKSWVSLPKGKGIKLTIAEERDVRRKQRAA 261


>gi|393233644|gb|EJD41214.1| hypothetical protein AURDEDRAFT_186691 [Auricularia delicata
           TFB-10046 SS5]
          Length = 361

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE  PL ++LRNRLKYA+T REV  IL+QR V VDGKVRTD TYP 
Sbjct: 121 GTYAPRPSPGPHKLRESFPLTILLRNRLKYAITGREVTKILLQRLVKVDGKVRTDDTYPT 180

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ +T E+FR+LYD KGRF +H +  EEA +KL KVR V  G +G+PYI T+DG
Sbjct: 181 GFMDVISLERTGEHFRILYDVKGRFVIHRITAEEASYKLLKVRRVALGARGVPYIVTHDG 240

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ NDT+K D+E+NKI DF+KFD GNIV+VTGGRN GR G+I +RE H G 
Sbjct: 241 RTIRYPDPLIRTNDTVKFDIEQNKIVDFVKFDTGNIVIVTGGRNMGRAGVITHREHHHGG 300

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQAAQA 282
           F+ +H++D+L   FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE   R+RQ A A
Sbjct: 301 FDIVHVRDSLDRTFATRISNIFVIGEGTKPWISLPKGKGTKLTISEERDVRRRQKAAA 358


>gi|295667347|ref|XP_002794223.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226286329|gb|EEH41895.1| 40S ribosomal protein S4 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 262

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPL++ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSPGPHKLRDCLPLVVFIRNRLKYALNARETNAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KIT FIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDLATGKITSFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAVALAG 261


>gi|449016469|dbj|BAM79871.1| 40S ribosomal protein S4 [Cyanidioschyzon merolae strain 10D]
          Length = 257

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 150/231 (64%), Positives = 190/231 (82%), Gaps = 1/231 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI++LRNRLKYALT RE + ILMQR V VDGKVRTD+T+PA
Sbjct: 25  GIWAPRPSAGPHKLRECLPLIIILRNRLKYALTGREAMQILMQRLVRVDGKVRTDRTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KTNE FRLLYDTKGRF LH +  EE K+KLC+++  Q G +GIPYI T+DG
Sbjct: 85  GFMDVIHIEKTNETFRLLYDTKGRFVLHRITPEEGKYKLCRIKRQQLGARGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK +DT+ LD+E  KITDF+KFD+G + M+TGG N GRVG++++RE+H G+
Sbjct: 145 RTIRYPDPLIKVHDTVVLDIETGKITDFVKFDIGALCMITGGHNIGRVGVVQHRERHPGA 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
            E +H++DA G EFAT++ NVF IG+  K  VSLP+GKG+KLS++EE  +R
Sbjct: 205 TEIVHLKDAAGREFATQISNVFVIGR-EKSLVSLPRGKGVKLSVVEERERR 254


>gi|44967243|gb|AAS49567.1| ribosomal protein S4 [Latimeria chalumnae]
          Length = 238

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/224 (68%), Positives = 183/224 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 15  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 74

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EE K+KLCKVR V  G KGIP++ T+D 
Sbjct: 75  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEETKYKLCKVRKVFVGTKGIPHLVTHDA 134

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KITDFIKFD GN  MV GG N GRVG+I NREKH GS
Sbjct: 135 RTIRYPDPLIKVNDTVQIDLNTGKITDFIKFDTGNQCMVIGGANLGRVGVITNREKHPGS 194

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 195 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 238


>gi|392565330|gb|EIW58507.1| 40S ribosomal protein S4 [Trametes versicolor FP-101664 SS1]
          Length = 262

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 149/238 (62%), Positives = 190/238 (79%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT +EV +I+ QR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGKEVTSIVKQRLIKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G KG+P++ T+DG
Sbjct: 85  GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVRKVAIGNKGVPFVTTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT++ D+E++KITDF+KFD GN+  +TGGRNRGR G+I +REKH G 
Sbjct: 145 RTIRYPDPAIKVNDTVRFDIEQSKITDFVKFDTGNLAFITGGRNRGRAGVIVHREKHVGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQAAQA 282
           F+ +H++D+L   FATR+ N+F IG+G+K WVSLPKGKG+KL+I EE   R+R+AA++
Sbjct: 205 FDIVHVKDSLERTFATRISNIFVIGEGTKSWVSLPKGKGLKLTIAEERDVRRRRAAES 262


>gi|365991206|ref|XP_003672432.1| ribosomal protein S4 [Naumovozyma dairenensis CBS 421]
 gi|343771207|emb|CCD27189.1| hypothetical protein NDAI_0J02970 [Naumovozyma dairenensis CBS 421]
          Length = 261

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 187/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYP 
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITD+IKFD G +V V GGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKVDLASGKITDYIKFDAGKLVYVIGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFIIGEPGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|410308430|gb|JAA32815.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
 gi|410353917|gb|JAA43562.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
          Length = 263

 Score =  327 bits (838), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 262


>gi|171685031|ref|XP_001907457.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942476|emb|CAP68128.1| unnamed protein product [Podospora anserina S mat+]
          Length = 259

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 152/233 (65%), Positives = 190/233 (81%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK R+C+PLI+ +RNRLKYAL +RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GVYAPRPSAGPHKLRDCMPLIVFVRNRLKYALNFRETRAILMQRLVKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H + DEE+K+KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRIGDEESKYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K++LE  KI DFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKINLETGKIEDFIKFDTGAIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +++A
Sbjct: 205 FNIVHLKDAIDNSFATRETNVFVIGQ-DKPWISLPKGKGVKLTIAEERDRKRA 256


>gi|410268286|gb|JAA22109.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
          Length = 263

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 262


>gi|402075079|gb|EJT70550.1| 40S ribosomal protein S4-A [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 261

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPL++ LRNRLKYAL +RE  AILMQR V VD KVRTD TYP 
Sbjct: 25  GVYAPKPSPGPHKQRECLPLVVFLRNRLKYALNFRETKAILMQRLVKVDAKVRTDATYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLIK NDT+K+DL   KITDFIKFD G + MVTGGRN GR+G+I +RE+H G 
Sbjct: 145 RTVRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAMAMVTGGRNMGRIGVITHRERHHGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DA+ + FATR  NVF +G   KPW+SLPKGKG+KL+I EE  +R+A   A
Sbjct: 205 FNIVHLKDAIDNTFATRESNVFVVGT-EKPWISLPKGKGVKLTIAEERDRRRAHTIA 260


>gi|38503308|sp|Q861U8.2|RS4Y1_GORGO RecName: Full=40S ribosomal protein S4, Y isoform 1
          Length = 263

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSS 262


>gi|238589837|ref|XP_002392136.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
 gi|215457775|gb|EEB93066.1| hypothetical protein MPER_08330 [Moniliophthora perniciosa FA553]
          Length = 264

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/240 (62%), Positives = 190/240 (79%), Gaps = 2/240 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + +DGKVRTD+TYP 
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKIDGKVRTDETYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI K+ E+FRLLYD KGRF +H +  EEA +KL KV+ V  G +G+P+I T+DG
Sbjct: 85  GFMDVVSIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVKKVALGARGVPHIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I  NDT+K D+++NKI DF+KFD GNIVMVTGGRN GR G+I +R+KH G 
Sbjct: 145 RTIRYPDPSINVNDTVKFDIQQNKIVDFVKFDTGNIVMVTGGRNMGRAGVIVHRKKHIGD 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQAAQAAA 284
           F+ +H++D+L   FATRL N+F IG+G+KPW+SLPKGKG KL+I EE   R+++AA+A+ 
Sbjct: 205 FDIVHVKDSLDRTFATRLSNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKRAAEAST 264


>gi|444320813|ref|XP_004181063.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
 gi|387514106|emb|CCH61544.1| hypothetical protein TBLA_0E04950 [Tetrapisispora blattae CBS 6284]
          Length = 261

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 156/237 (65%), Positives = 189/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AI+MQRHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVRAIMMQRHVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+K +PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKSVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTVKIDLATGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE R R+ AQ+ 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSISEE-RDRRRAQSG 260


>gi|38503307|sp|Q861U7.2|RS4Y1_PONPY RecName: Full=40S ribosomal protein S4, Y isoform 1
          Length = 263

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +  +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLATKQSS 262


>gi|310791164|gb|EFQ26693.1| ribosomal family S4e [Glomerella graminicola M1.001]
          Length = 262

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 190/238 (79%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE  +I+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRETRSIMMQRLIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL+  KI DFIKFD G+I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGS-EKPWISLPKGKGVKLTIAEERDRRRANALAG 261


>gi|28204681|gb|AAO37288.1| ribosomal protein S4 [Gorilla gorilla]
          Length = 262

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE  KR A + ++
Sbjct: 204 FDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSS 261


>gi|296475761|tpg|DAA17876.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
          Length = 260

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 189/238 (79%), Gaps = 3/238 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  + MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKMCMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTRENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK ND I++DLE +KITDFIKFD GN+ MVTGG N    G+I NRE+H GS
Sbjct: 145 RIIRYPDPLIKVNDIIQIDLETSKITDFIKFDTGNLCMVTGGAN---XGVITNRERHPGS 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW SLP GKGI L+I EE  KR AA+ ++
Sbjct: 202 FDVVHVKDANGNSFATRLSNIFIIGKGNKPWTSLPCGKGICLTIAEERDKRLAAKQSS 259


>gi|118573852|sp|Q4GXU6.1|RS4_CARGR RecName: Full=40S ribosomal protein S4
 gi|70909481|emb|CAJ17165.1| ribosomal protein S4e [Carabus granulatus]
          Length = 261

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YP+
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+L++  +KI D IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+ GH FA RL NVF IGKGSK +VSLP+GKG+KLSI EE  KR AA+ 
Sbjct: 205 FDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAAKT 260


>gi|156542863|ref|XP_001599933.1| PREDICTED: 40S ribosomal protein S4-like [Nasonia vitripennis]
          Length = 262

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 155/237 (65%), Positives = 189/237 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+L++   KI D I+FD GN+ M+TGGRN GRVG + NRE+H+GS
Sbjct: 145 RTIRYPDPLIKVNDTIQLEIATGKILDSIRFDTGNLCMITGGRNLGRVGTVVNRERHQGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+  HI+D+ GH FATRL NVF IGKG+KP+VSLP+G G+KL+I EE  KR AA+  
Sbjct: 205 FDICHIKDSQGHTFATRLHNVFIIGKGTKPYVSLPRGNGVKLTIAEERDKRLAAKGV 261


>gi|291407691|ref|XP_002720154.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 3
           [Oryctolagus cuniculus]
          Length = 227

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 152/225 (67%), Positives = 185/225 (82%)

Query: 60  SRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNE 119
           +RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFMDV+SI KT E
Sbjct: 2   ARECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGE 61

Query: 120 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 179
           NFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTIRYPDPLIK N
Sbjct: 62  NFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVN 121

Query: 180 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHE 239
           DTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA G+ 
Sbjct: 122 DTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNS 181

Query: 240 FATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 182 FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 226


>gi|28204689|gb|AAO37289.1| ribosomal protein S4 [Pongo pygmaeus]
          Length = 262

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +  +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIDKTGEHFRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 144 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR A + ++
Sbjct: 204 FDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLATKQSS 261


>gi|28630198|gb|AAN77887.1| ribosomal protein S4 [Scyliorhinus canicula]
          Length = 238

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 150/224 (66%), Positives = 186/224 (83%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 15  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 74

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT+E+FRL+YDTKGRF +H +  EEAK+KLCKVR ++ G KGIP++ T+D 
Sbjct: 75  GSMDVISIDKTSEHFRLIYDTKGRFAVHRITVEEAKYKLCKVRKIRVGTKGIPHLVTHDA 134

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL+  KITDFIKFD GN+ MV GG N GR+G+I NRE+H GS
Sbjct: 135 RTIRYPDPLIKVNDTVQIDLDTGKITDFIKFDTGNLCMVIGGANLGRIGVITNRERHPGS 194

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 195 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238


>gi|212544592|ref|XP_002152450.1| 40S ribosomal protein S4 [Talaromyces marneffei ATCC 18224]
 gi|210065419|gb|EEA19513.1| 40S ribosomal protein S4, putative [Talaromyces marneffei ATCC
           18224]
          Length = 261

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 190/238 (79%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD T+PA
Sbjct: 25  GTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRETKAILMQRLVQVDGKVRTDPTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDPLIK NDT+K+DL   KITDF+KFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTVRYPDPLIKVNDTVKIDLATGKITDFVKFDTGVIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE R R+ AQA A
Sbjct: 205 FNIVHIKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEE-RDRRRAQAIA 260


>gi|149244128|ref|XP_001526607.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449001|gb|EDK43257.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 246

 Score =  326 bits (836), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 156/234 (66%), Positives = 187/234 (79%), Gaps = 2/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK RE LPL++ LRNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 7   GAYAPRSSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQQHVQVDGKVRTDATFPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 67  GFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGKVKKVQLGKRGIPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND++K+DL   KITDF+KFD G +VMVTGGRN GR+G I +REKH+G 
Sbjct: 127 RTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGRIGTIVHREKHEGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE-ARKRQ 278
           F+ +HI+DAL   F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  R RQ
Sbjct: 187 FDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITEERDRARQ 240


>gi|385304652|gb|EIF48661.1| 40s ribosomal protein s4 [Dekkera bruxellensis AWRI1499]
          Length = 262

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 153/237 (64%), Positives = 192/237 (81%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILM+R V VDGKVRTD T+PA
Sbjct: 25  GVYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMERQVKVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPYI T+DG
Sbjct: 85  GFMDVISLDATNENFRLVYDIKGRFAIHRITPEEASYKLAKVKKVQLGKKGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK  D++K+DL+  KI+ FIKF+ G + MVTGGRN GRVG+I ++E+H+G 
Sbjct: 145 RTIRYPDPAIKVGDSVKVDLDTGKISSFIKFETGKLAMVTGGRNLGRVGVITHKERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGS-KPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ ++I+D+L + F TRL NVF IG+G+ KPW+SLPKGKG+KLSI EE  +R+AAQ 
Sbjct: 205 FDLVYIKDSLDNTFITRLNNVFVIGEGAGKPWISLPKGKGVKLSISEERDRRRAAQG 261


>gi|62896747|dbj|BAD96314.1| ribosomal protein S4, Y-linked 1 Y isoform variant [Homo sapiens]
          Length = 263

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE  KR A + ++
Sbjct: 205 FGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLATKQSS 262


>gi|149239787|ref|XP_001525769.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146449892|gb|EDK44148.1| 40S ribosomal protein S4 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 264

 Score =  326 bits (835), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 156/234 (66%), Positives = 187/234 (79%), Gaps = 2/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S+GPHK RE LPL++ +RNRLKYAL  REV AILMQ+HV VDGKVRTD T+PA
Sbjct: 25  GAYAPKSSAGPHKLRESLPLVIFIRNRLKYALNGREVKAILMQQHVQVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFTVHRISAEEASYKLGKVKKVQLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK ND++K+DL   KITDF+KFD G +VMVTGGRN GR+G I +REKH+G 
Sbjct: 145 RTIRYPDPLIKVNDSVKIDLATGKITDFLKFDTGRLVMVTGGRNMGRIGTIVHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEE-ARKRQ 278
           F+ +HI+DAL   F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  R RQ
Sbjct: 205 FDLVHIKDALERTFVTRLNNVFVIGEEAGKPWVSLPKGKGIKLSITEERDRARQ 258


>gi|403218384|emb|CCK72874.1| hypothetical protein KNAG_0M00210 [Kazachstania naganishii CBS
           8797]
          Length = 261

 Score =  326 bits (835), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILM+RHV VDGKVRTD TYPA
Sbjct: 25  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMERHVKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G++G+PY+ T+DG
Sbjct: 85  GFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKRGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI D+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRYPDPNIKINDTVKIDLASGKIVDYIKFDTGKLVYVTGGRNLGRIGTIIHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKL+I EE  +R+A Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFIIGETGKPYISLPKGKGIKLTIAEERDRRRAQQG 260


>gi|355693324|gb|EHH27927.1| hypothetical protein EGK_18242 [Macaca mulatta]
          Length = 264

 Score =  325 bits (834), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 153/239 (64%), Positives = 193/239 (80%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+ ++GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRRATGPHKLRECLPLIIFLRNRLKYALTGDEVKKIGMQRFIKIDGKVRTDITYPA 84

Query: 107 GF-MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           GF MD++SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D
Sbjct: 85  GFIMDIISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 144

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
             TI +PDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G++ NRE+H G
Sbjct: 145 AHTIHHPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVLTNRERHPG 204

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           SF+ +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 SFDVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 263


>gi|154273927|ref|XP_001537815.1| 40S ribosomal protein S4 [Ajellomyces capsulatus NAm1]
 gi|150415423|gb|EDN10776.1| ribosomal protein S4 [Ajellomyces capsulatus NAm1]
          Length = 262

 Score =  325 bits (834), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARETNAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAMALAG 261


>gi|301101263|ref|XP_002899720.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
 gi|262102722|gb|EEY60774.1| 40S ribosomal protein S4 [Phytophthora infestans T30-4]
          Length = 261

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 184/227 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RECLPLI++LRNRLKYALT +EV  I MQ+ V VDGKVR D  +PA
Sbjct: 25  GIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRVDPDFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV +PKT + FRL+YDTKGRF LH + DEE KFKL KV   ++ +K IPYI T DG
Sbjct: 85  GFMDVVELPKTGDQFRLMYDTKGRFVLHRISDEEKKFKLAKVIRQEYTKKAIPYIATNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK  DT+K+DLE  K+ D IKF+VGN+V +T GRN GRVGI+ N E+H+GS
Sbjct: 145 RTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHNVERHQGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F   H++D+ G++FATRLGNVF +GK ++PWVSLPKGKGIKL+I+EE
Sbjct: 205 FNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIKLNILEE 251


>gi|429860169|gb|ELA34915.1| 40s ribosomal protein s4 [Colletotrichum gloeosporioides Nara gc5]
          Length = 262

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 191/238 (80%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+CLPLI+ LRNRLKYAL YRE  +I+MQR + VD KVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNYRETRSIMMQRLIKVDHKVRTDITFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL+  KI DFIKFD G+I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE R R+ AQA A
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKGKGVKLTIAEE-RDRRRAQALA 260


>gi|237862674|gb|ACR24962.1| ribosomal protein S4 [Lepidochitona cinerea]
          Length = 253

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 186/227 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+ S+GPHK RECLPLI+ LRNRLKYALTY EV  I+ QR + VDGKVRTD  +PA
Sbjct: 26  GVFAPRASTGPHKLRECLPLIVFLRNRLKYALTYVEVKKIVKQRLIKVDGKVRTDMGFPA 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H ++ EEAK+KLCKVR VQ G KG+P + T+DG
Sbjct: 86  GFMDVITIEKTAENFRLIYDVKGRFTVHRIKPEEAKYKLCKVRRVQTGPKGVPMLYTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDT+ LD+  +KI DFIKFD GN+ M+TGG N GRVG I +RE+H GS
Sbjct: 146 RTIRYPDPLVKVNDTVLLDIATSKIKDFIKFDSGNLCMITGGHNLGRVGTITHRERHPGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F+ +H++D+LGH FATRL  VF IGKG+KPWVSLP+GKG++LSI E+
Sbjct: 206 FDIVHVKDSLGHSFATRLSYVFIIGKGNKPWVSLPRGKGVRLSIAEK 252


>gi|28204665|gb|AAO37286.1| ribosomal protein S4 [Pan paniscus]
 gi|28204673|gb|AAO37287.1| ribosomal protein S4 [Pan troglodytes]
          Length = 262

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 24  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 84  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 144 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 204 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 261


>gi|57113861|ref|NP_001008987.1| 40S ribosomal protein S4, Y isoform 1 [Pan troglodytes]
 gi|38503309|sp|Q861U9.2|RS4Y1_PANTR RecName: Full=40S ribosomal protein S4, Y isoform 1
 gi|38503310|sp|Q861V0.2|RS4Y1_PANPA RecName: Full=40S ribosomal protein S4, Y isoform 1
 gi|48728362|gb|AAT46347.1| RPS4Y [Pan troglodytes]
          Length = 263

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KI +FIKFD GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 262


>gi|44967294|gb|AAS49568.1| ribosomal protein S4 [Protopterus dolloi]
          Length = 238

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 150/224 (66%), Positives = 185/224 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP+
Sbjct: 15  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPS 74

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +    KGIP++ T+D 
Sbjct: 75  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVRNKGIPHLVTHDA 134

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT++++LE  KITD IKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 135 RTIRYPDPLIKVNDTVQINLESGKITDMIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 194

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++DA G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I
Sbjct: 195 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 238


>gi|294889902|ref|XP_002772984.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
           ATCC 50983]
 gi|239877687|gb|EER04800.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
           ATCC 50983]
          Length = 268

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/231 (62%), Positives = 187/231 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC+PLI++LRNRLKYALTY EV  I+MQR + VDGKVRTD +YPA
Sbjct: 25  GVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNEVKMIVMQRLIKVDGKVRTDMSYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRLL+DTKGRF +H +  +EA +KLC+V+ V  G KG+PY NT+DG
Sbjct: 85  GFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCRVKKVYMGSKGVPYANTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK ND++++D++  K+ DF+KF++G  VM+TGG N GRVG+I +RE+H G+
Sbjct: 145 RTIRYPDPEIKENDSVRVDIQTGKVLDFLKFEIGATVMMTGGNNIGRVGVITHRERHPGN 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FE IH++DA G+ FATRL NVF IG   KPWVSLPKG G++LS +E+   R
Sbjct: 205 FEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQLSTVEDRHMR 255


>gi|254584933|ref|XP_002498034.1| 40S ribosomal protein S4 [Zygosaccharomyces rouxii]
 gi|238940928|emb|CAR29101.1| ZYRO0G00550p [Zygosaccharomyces rouxii]
          Length = 261

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 151/236 (63%), Positives = 186/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL++ LRNRLKYAL  REV AI+MQRHV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSQGPHKLRESLPLVVFLRNRLKYALNTREVKAIMMQRHVKVDGKVRTDSTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVISLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+PDP +K NDT+K+DL   KI D+IKFD G +V VTGGRN GR+G I ++E+H G 
Sbjct: 145 RTIRFPDPNVKVNDTVKIDLASGKIQDYIKFDTGKLVYVTGGRNLGRIGTIVHKERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIKLSI EE  +R+A   
Sbjct: 205 FDLVHIKDSLDNTFVTRLNNVFVIGEPGKPYISLPKGKGIKLSITEERDRRRAQNG 260


>gi|327353918|gb|EGE82775.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis ATCC 18188]
          Length = 302

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 65  GSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRETNAILMQRLVKVDGKVRTDSTYPA 124

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 125 GFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 184

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 185 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 244

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 245 FNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAMALAG 301


>gi|294875217|ref|XP_002767227.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
           ATCC 50983]
 gi|239868773|gb|EEQ99944.1| 40S ribosomal protein S4, X isoform, putative [Perkinsus marinus
           ATCC 50983]
          Length = 268

 Score =  325 bits (834), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 144/227 (63%), Positives = 186/227 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC+PLI++LRNRLKYALTY EV  I+MQR + VDGKVRTD +YPA
Sbjct: 25  GVWAPRPSTGPHKLRECMPLIVLLRNRLKYALTYNEVKMIVMQRLIKVDGKVRTDMSYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRLL+DTKGRF +H +  +EA +KLC+V+ V  G KG+PY NT+DG
Sbjct: 85  GFMDVITIEKTKENFRLLFDTKGRFAIHKIHPDEAAYKLCRVKKVYMGSKGVPYANTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK ND++++D++  K+ DF+KF++G  VM+TGG N GRVG+I +RE+H G+
Sbjct: 145 RTIRYPDPEIKENDSVRIDIQTGKVLDFLKFEIGATVMMTGGNNIGRVGVITHRERHPGN 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           FE IH++DA G+ FATRL NVF IG   KPWVSLPKG G++LS +E+
Sbjct: 205 FEIIHVRDAAGNNFATRLSNVFVIGHEGKPWVSLPKGDGVQLSTVED 251


>gi|380487060|emb|CCF38284.1| 40S ribosomal protein S4 [Colletotrichum higginsianum]
          Length = 262

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 189/238 (79%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+CLPLI+ LRNRLKYAL +RE  +ILMQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRDCLPLIVFLRNRLKYALNFRETRSILMQRLIKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL+  KI DFIKFD G+I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLKTGKIQDFIKFDTGSIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPK KG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIG-SEKPWISLPKSKGVKLTIAEERDRRRANALAG 261


>gi|346977567|gb|EGY21019.1| 40S ribosomal protein S4-A [Verticillium dahliae VdLs.17]
          Length = 262

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 188/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE  +I+MQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRETRSIMMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H ++ EEA++KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGAIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  IH++DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIIHVKDAIDNTFATRESNVFVIGS-EKPWISLPKGKGVKLTIAEERDRRRAHAIAG 261


>gi|391331686|ref|XP_003740274.1| PREDICTED: 40S ribosomal protein S4-like [Metaseiulus occidentalis]
          Length = 262

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/237 (65%), Positives = 187/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LP+IL+LRN+LKYALT  EV  I+ QR + VDGKVRTD T+P 
Sbjct: 25  GVFAPRPSAGPHKLRESLPIILILRNKLKYALTGSEVTKIVNQRLIKVDGKVRTDATFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT E FR+ YD KGRF LH +  EEA++KLC+V+ +  G K IP++  +DG
Sbjct: 85  GFMDVVSIEKTGEFFRIHYDVKGRFILHRITAEEAEYKLCRVKKMSVGPKKIPFLVLHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKANDT+K+D+   KI DFIKFD GN+ MVTGGRN GRVGII +RE+H GS
Sbjct: 145 RTIRYPDPLIKANDTVKVDIATGKIDDFIKFDTGNVCMVTGGRNLGRVGIITSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D+ GH FATR   +F IGKGSKPWVSLPKGKG+KLSI EE  KR A + A
Sbjct: 205 FDIVHIKDSSGHTFATRQSYIFVIGKGSKPWVSLPKGKGVKLSIAEERDKRLAVKKA 261


>gi|440853|dbj|BAA03786.1| ribosomal protein S4 [Drosophila melanogaster]
          Length = 261

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 152/235 (64%), Positives = 189/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL+  LRNRLKYAL   EV  I+MQR V V GKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI AND++++D+   KITD+IKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+ GH FATRL NVF IGKG+KP++SLPKGKG+KLSI EE  KR AA+
Sbjct: 205 FDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLAAK 259


>gi|291407687|ref|XP_002720152.1| PREDICTED: ribosomal protein S4, X-linked X-like isoform 1
           [Oryctolagus cuniculus]
          Length = 255

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 189/238 (79%), Gaps = 8/238 (3%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK        +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK--------IFVGTKGIPHLVTHDA 136

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 137 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 196

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 197 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 254


>gi|116871421|gb|ABK30794.1| ribosomal protein S4 [Branchiostoma belcheri]
          Length = 264

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL L LRNRLKYALTY EV  ILMQR + VDGKVRTD+ YPA
Sbjct: 25  GKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRTDRCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KLCKVR V  G KGIP + T+D 
Sbjct: 85  GFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCKVRKVMTGPKGIPCLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ ND++++D+   KITD IKFD GN+ MVTGGRN GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D  GH FATRL ++F IG+G+KPWVSLPKGKGI  S+  + R R+ A  AA
Sbjct: 205 FDIVHVKDTAGHTFATRLADIFIIGRGNKPWVSLPKGKGIP-SVHRKERDRRLALKAA 261


>gi|170086746|ref|XP_001874596.1| 40S ribosomal protein S4 [Laccaria bicolor S238N-H82]
 gi|164649796|gb|EDR14037.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 262

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 188/238 (78%), Gaps = 3/238 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + +DGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKIDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G +G+P+I T+DG
Sbjct: 85  GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEANYKLLKVRRVAIGARGVPHIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ NDT+K DLE+ KITD++KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPLIQVNDTVKFDLEQGKITDYVKFDTGNIVMITGGRNMGRAGVIVHREKHIGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE---ARKRQAAQ 281
           F+ +H++D+L   FATR+ N+F IG+G KPW+SLPKGKG KL+I EE    RK++A Q
Sbjct: 205 FDIVHVKDSLDRTFATRVTNIFVIGEGIKPWISLPKGKGTKLTISEERDVKRKQRAEQ 262


>gi|389739254|gb|EIM80448.1| 40S ribosomal protein S4 [Stereum hirsutum FP-91666 SS1]
          Length = 263

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 185/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + VDGKVRTD TYP 
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTSIVQQRLIKVDGKVRTDNTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I K+ E+FRLLYD KGRF +H +  EEA++KL KV+ V  G K +PYI T+DG
Sbjct: 85  GFMDVLTIEKSGEHFRLLYDVKGRFTIHRITPEEAEYKLLKVKKVAIGAKAVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K D  +NKITD+ KFD GNIVM+TGGRN GR G+I +REKH G 
Sbjct: 145 RTIRYPDPLIKVNDTVKFDFTQNKITDYAKFDTGNIVMITGGRNMGRSGVIVHREKHIGD 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +H++DAL   FATR+ N+F IG+G+KPW+SLPKGKG KL+I EE   R+  +AA
Sbjct: 205 FDIVHVKDALDRTFATRITNIFVIGEGTKPWISLPKGKGTKLTIAEERDVRRKQRAA 261


>gi|242812945|ref|XP_002486066.1| 40S ribosomal protein S4 [Talaromyces stipitatus ATCC 10500]
 gi|218714405|gb|EED13828.1| 40S ribosomal protein S4, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 263

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 155/233 (66%), Positives = 187/233 (80%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD T+PA
Sbjct: 25  GTYAPRASAGPHKLRDCLPLIVFIRNRLKYALNGRETKAILMQRLVQVDGKVRTDPTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KITDFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKIDLATGKITDFIKFDTGVIAMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A
Sbjct: 205 FNIVHIKDAVDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLSIAEERDRRRA 256


>gi|50423849|ref|XP_460509.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
 gi|49656178|emb|CAG88822.1| DEHA2F03300p [Debaryomyces hansenii CBS767]
          Length = 263

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 189/236 (80%), Gaps = 1/236 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAKVKKVQLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+AND++K+DL   KITDFI FD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDSVKVDLATGKITDFISFDTGRLVMVTGGRNMGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+L + F TRL NVF +G +  KP +SLPKGKGIKLSI EE  +R+  Q
Sbjct: 205 FDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGIKLSISEERDRRRNQQ 260


>gi|410308428|gb|JAA32814.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
 gi|410353915|gb|JAA43561.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
          Length = 263

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 149/238 (62%), Positives = 188/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 262


>gi|50426545|ref|XP_461869.1| 40S ribosomal protein S4 [Debaryomyces hansenii CBS767]
 gi|49657539|emb|CAG90330.1| DEHA2G07392p [Debaryomyces hansenii CBS767]
          Length = 263

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 189/236 (80%), Gaps = 1/236 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ HV VDGKVRTD T+PA
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVIFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDATFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G++GIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFTVHRITAEEASYKLAKVKKVQLGKRGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+AND++K+DL   K+TDFI FD G +VMVTGGRN GRVG+I +REKH+G 
Sbjct: 145 RTIRYPDPLIRANDSVKVDLATGKVTDFISFDTGRLVMVTGGRNMGRVGVITHREKHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +HI+D+L + F TRL NVF +G +  KP +SLPKGKGIKLSI EE  +R+  Q
Sbjct: 205 FDLVHIKDSLENTFVTRLTNVFIVGTEAGKPHISLPKGKGIKLSISEERDRRRNQQ 260


>gi|261204631|ref|XP_002629529.1| 40S ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
 gi|239587314|gb|EEQ69957.1| ribosomal protein S4 [Ajellomyces dermatitidis SLH14081]
 gi|239614147|gb|EEQ91134.1| ribosomal protein S4 [Ajellomyces dermatitidis ER-3]
          Length = 262

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNSRETNAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRETNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAMALAG 261


>gi|70909479|emb|CAJ17164.1| ribosomal protein S4e [Biphyllus lunatus]
          Length = 261

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKKVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP++K NDTI++++  +KI DFIKFD GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPMVKVNDTIQVEIATSKILDFIKFDSGNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
            + +HI+DA GH FATRL NVF IGKG+K  VSLP+GKG+KLSI EE  KR AA+ 
Sbjct: 205 SDIVHIKDANGHTFATRLNNVFIIGKGNKALVSLPRGKGVKLSIAEERDKRLAAKT 260


>gi|28630195|gb|AAN77886.1| ribosomal protein S4 [Myxine glutinosa]
          Length = 238

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 147/224 (65%), Positives = 184/224 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPH+ RECL LI+ LRNRL+YALTY EV  I MQR + +DGKVRTD TYPA
Sbjct: 15  GVFAPRPSTGPHRLRECLSLIIFLRNRLRYALTYDEVKKICMQRLIKIDGKVRTDITYPA 74

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT+ENFRL+YDTKGRF +H +  EEAK+KLCK+R  +   KGIP++ T+D 
Sbjct: 75  GFMDVITIDKTSENFRLIYDTKGRFAIHRITAEEAKYKLCKIRKRRVASKGIPFVVTHDA 134

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT++++LE  KITDFIKF+ GN+ MVTGG N GRVGII +RE+H GS
Sbjct: 135 RTIRYPDPLIKENDTVQVNLENGKITDFIKFETGNLCMVTGGANLGRVGIITSRERHPGS 194

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++D  G+ FATRLGN+F IGK  K WVSLP+GKGI+L+I
Sbjct: 195 FDVVHVKDTAGNTFATRLGNIFVIGKAQKAWVSLPRGKGIRLTI 238


>gi|425780989|gb|EKV18971.1| 40S ribosomal protein S4, putative [Penicillium digitatum PHI26]
 gi|425783252|gb|EKV21109.1| 40S ribosomal protein S4, putative [Penicillium digitatum Pd1]
          Length = 260

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 189/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  REV AI+MQR V VDGKVRTD TYPA
Sbjct: 24  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRTDTTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 84  GFMDVISLEKTGEHFRLVYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KI DF+KFD G ++M TGGRN GRVG+I +RE+H G 
Sbjct: 144 RTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDGG 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DAL ++FATR  NVF IG+  KPWVSLPKGKG+KLSI EE  +R+A + A
Sbjct: 204 FNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVKLSIAEERDRRRAHELA 259


>gi|71000467|ref|XP_754922.1| 40S ribosomal protein S4 [Aspergillus fumigatus Af293]
 gi|66852559|gb|EAL92884.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus Af293]
 gi|159127935|gb|EDP53050.1| 40S ribosomal protein S4, putative [Aspergillus fumigatus A1163]
          Length = 261

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDF++FD G + MVTGGRN GRVGII +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTGGRNMGRVGIITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A   A
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRAYALA 260


>gi|70909485|emb|CAJ17167.1| ribosomal protein S4e [Julodis onopordi]
          Length = 261

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 189/236 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLK ALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKCALTNAEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G KG+P++ T+DG
Sbjct: 85  GFMDVITIEKTGEYFRLIYDVKGRFTIHRITAEEAKYKLCKVRKVQTGPKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+L++  +K  DFIKF+  N+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPIIKVNDTIQLEIATSKFLDFIKFESNNLCMITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DA GH FATRL NVF IGKGSK +VSLP+GKG+KLSI EE  KR AA++
Sbjct: 205 FDIVHIKDANGHVFATRLNNVFIIGKGSKAFVSLPRGKGVKLSIAEERDKRLAAKS 260


>gi|225559261|gb|EEH07544.1| 40S ribosomal protein S4 [Ajellomyces capsulatus G186AR]
 gi|240282196|gb|EER45699.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H143]
 gi|325088332|gb|EGC41642.1| 40S ribosomal protein S4 [Ajellomyces capsulatus H88]
          Length = 262

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYP 
Sbjct: 25  GSYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNARETNAILMQRLVKVDGKVRTDSTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIDKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGAIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFIIGQ-DKPWISLPKGKGVKLSIAEERDRRRAMALAG 261


>gi|348666498|gb|EGZ06325.1| hypothetical protein PHYSODRAFT_356144 [Phytophthora sojae]
          Length = 261

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 184/227 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RECLPLI++LRNRLKYALT +EV  I MQ+ V VDGKVR D  +PA
Sbjct: 25  GIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRVDPDFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV +PKT + FRLLYDTKGRF LH + DEE KFKL KV   ++ +K IPYI T DG
Sbjct: 85  GFMDVVELPKTGDQFRLLYDTKGRFVLHRISDEEKKFKLAKVIRQEYTKKAIPYIATNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK  DT+K+DLE  K+ D IKF+VGN+V +T GRN GRVGI+ + E+H+GS
Sbjct: 145 RTIRYPDPLIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHHIERHQGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F   H++D+ G++FATRLGNVF +GK ++PWVSLPKGKGIKL+I+EE
Sbjct: 205 FNIAHVKDSAGNDFATRLGNVFAVGKEARPWVSLPKGKGIKLNILEE 251


>gi|58257447|gb|AAW69345.1| 40S ribosomal protein S4-A-like protein [Magnaporthe grisea]
          Length = 244

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 7   GTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRTDSTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 67  GFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K++L+  KITDFIKFD G + MVT G N GRVG+I +RE+H G 
Sbjct: 127 RTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ + F TR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 187 FNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQTIAG 243


>gi|440633275|gb|ELR03194.1| 40S ribosomal protein S4 [Geomyces destructans 20631-21]
          Length = 261

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSPGPHKLRDCMPLIVFIRNRLKYALNARETKAIVMQRLIKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGEHFRLVYDTKGRFTVHRVQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IG G KPW+SLPKGKG+KL+I EE  +R+A Q A
Sbjct: 205 FNIVHIKDAIDNSFATRENNVFVIG-GEKPWISLPKGKGVKLTIAEERDRRRAQQIA 260


>gi|119192028|ref|XP_001246620.1| 40S ribosomal protein S4 [Coccidioides immitis RS]
 gi|303313163|ref|XP_003066593.1| 40S ribosomal protein S4 [Coccidioides posadasii C735 delta SOWgp]
 gi|240106255|gb|EER24448.1| 40S ribosomal protein S4, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320036517|gb|EFW18456.1| 40S ribosomal protein S4 [Coccidioides posadasii str. Silveira]
 gi|392864147|gb|EAS35046.2| 40S ribosomal protein S4 [Coccidioides immitis RS]
          Length = 262

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRETNAILMQRLVKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDFIKFD G I M TGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVICMATGGRNMGRVGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPWVSLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FGIVHIKDAIDNTFATRESNVFVIGH-EKPWVSLPKGKGVKLSIAEERDRRRAMALAG 261


>gi|393221758|gb|EJD07242.1| hypothetical protein FOMMEDRAFT_164273 [Fomitiporia mediterranea
           MF3/22]
          Length = 369

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 186/237 (78%), Gaps = 2/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + VDGKVRTD+T+P 
Sbjct: 130 GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTAIVNQRIIRVDGKVRTDETFPT 189

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I K+ E+FRLLYD KGRF +H +  EEA +KLCKVR +  G+  +P+I T+DG
Sbjct: 190 GFMDVVTIEKSGEHFRLLYDVKGRFAIHRITPEEASYKLCKVRKIGIGRNAVPHIVTHDG 249

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K D E+NKITDF+KFD GNIVMVTGGRN GR G+I +REK+ G 
Sbjct: 250 RTIRYPDPLIKVNDTVKFDFEQNKITDFVKFDTGNIVMVTGGRNMGRAGVIVHREKNDGG 309

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA--RKRQAAQ 281
            + +H++DAL   F TR+ N+F IG+G KPW+SLPKGKG KL+I EE   R++Q A+
Sbjct: 310 HDMVHVRDALDRTFVTRVSNIFVIGEGIKPWISLPKGKGTKLTISEERDLRRKQRAE 366


>gi|255944153|ref|XP_002562844.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587579|emb|CAP85619.1| Pc20g02900 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 260

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 188/237 (79%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  REV AI+MQR V VDGKVRTD TYPA
Sbjct: 24  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLVKVDGKVRTDTTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ KT E+FRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 84  GFMDVISLEKTGEHFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KI DF+KFD G ++M TGGRN GRVG+I +RE+H G 
Sbjct: 144 RTIRYPDPAIKVNDTVKVDIATGKILDFVKFDSGVVIMATGGRNMGRVGVITHRERHDGG 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DAL ++FATR  NVF IG+  KPWVSLPKGKG+KLSI EE  +R+A   A
Sbjct: 204 FNIVHVRDALDNQFATRESNVFVIGQ-DKPWVSLPKGKGVKLSIAEERDRRRAHDLA 259


>gi|121704880|ref|XP_001270703.1| 40S ribosomal protein S4 [Aspergillus clavatus NRRL 1]
 gi|119398849|gb|EAW09277.1| 40S ribosomal protein S4, putative [Aspergillus clavatus NRRL 1]
          Length = 261

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 187/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVVGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KIT+F++FD G +VMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDIATGKITEFVRFDTGVVVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAHTIA 260


>gi|410308432|gb|JAA32816.1| ribosomal protein S4, Y-linked 1 [Pan troglodytes]
 gi|410353919|gb|JAA43563.1| ribosomal protein S4, Y-linked 2 [Pan troglodytes]
          Length = 263

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 188/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDT+++DL   KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++  E  KR A + ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAAERDKRLATKQSS 262


>gi|75029893|sp|Q4PMB3.1|RS4_IXOSC RecName: Full=40S ribosomal protein S4
 gi|67083833|gb|AAY66851.1| ribosomal protein S4 [Ixodes scapularis]
          Length = 262

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 151/236 (63%), Positives = 188/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI++LRNRLKYALT  EV  I+ QR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRLLYD KGRF LH +  EEAK+KLC+V+ VQ G KG+P++ T+D 
Sbjct: 85  GFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KI D+IKFD GN+ MVTGG N GRVG+I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+ GH FATRL  +F IGK +KP++SLP+GKGIKLS+ EE  +R  A++
Sbjct: 205 FDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLSVAEERDRRLQAKS 260


>gi|383862866|ref|XP_003706904.1| PREDICTED: 40S ribosomal protein S4-like [Megachile rotundata]
          Length = 262

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 186/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITINKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI LD+    I DFI+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIHLDIATGTILDFIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE  KR AA+ 
Sbjct: 205 FDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAAKG 260


>gi|66517407|ref|XP_623050.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Apis mellifera]
 gi|380027232|ref|XP_003697333.1| PREDICTED: 40S ribosomal protein S4-like [Apis florea]
          Length = 262

 Score =  323 bits (827), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 186/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDANYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI LD+   KI D I+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE  KR AA+ 
Sbjct: 205 FDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAAKG 260


>gi|389646755|ref|XP_003721009.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
 gi|86196449|gb|EAQ71087.1| hypothetical protein MGCH7_ch7g494 [Magnaporthe oryzae 70-15]
 gi|351638401|gb|EHA46266.1| 40S ribosomal protein S4-A [Magnaporthe oryzae 70-15]
          Length = 262

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K++L+  KITDFIKFD G + MVT G N GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAGNNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ + F TR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKLTIAEERDRRRAQTIAG 261


>gi|451997437|gb|EMD89902.1| hypothetical protein COCHEDRAFT_1177980 [Cochliobolus
           heterostrophus C5]
          Length = 262

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 157/238 (65%), Positives = 184/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+ LPLI+ LRNRLKYAL  REV AILMQR V VDGKVRTD T+P 
Sbjct: 25  GAYAPKASPGPHKLRDSLPLIIFLRNRLKYALNAREVNAILMQRLVKVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI+DFIKFD G IVMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EF TR  NV  IGK  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 261


>gi|264667395|gb|ACY71283.1| ribosomal protein S4 [Chrysomela tremula]
          Length = 261

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 153/235 (65%), Positives = 189/235 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDSNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G K IP++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLIYDVKGRFAVHRITAEEAKYKLCKVRRVQTGPKNIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP IK NDTI++++  +KI D+IKF+ GN+ M+TGGRN GRVG + NRE+H GS
Sbjct: 145 RTLRYPDPNIKVNDTIQMEIATSKILDYIKFESGNLCMITGGRNLGRVGTVMNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA GH FATRL NVF IGKG+K +VSLP+GKGIKLSI EE  KR AA+
Sbjct: 205 FDIVHVKDANGHVFATRLHNVFIIGKGAKAFVSLPRGKGIKLSIAEERDKRLAAK 259


>gi|296482862|tpg|DAA24977.1| TPA: ribosomal protein S4, X-linked X-like [Bos taurus]
          Length = 263

 Score =  322 bits (826), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 190/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS+GPHK RECLPLI+ LRNRLK ALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFALRPSAGPHKLRECLPLIIFLRNRLKCALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKG F +H +  EEAK+KL KVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGHFAVHRITPEEAKYKLYKVRKIFMGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDF+KFD GN+ MVTGG + GR+G+I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFMKFDTGNLCMVTGGASLGRIGVITSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL ++F IGKG+KPW+SLP GKGI+L+I EE  KR A + ++
Sbjct: 205 FDVVHVKDANGNSFATRLSDIFVIGKGNKPWISLPHGKGIRLTIAEERDKRLAVKQSS 262


>gi|189202048|ref|XP_001937360.1| 40S ribosomal protein S4 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|330932938|ref|XP_003303979.1| 40S ribosomal protein S4 [Pyrenophora teres f. teres 0-1]
 gi|187984459|gb|EDU49947.1| 40S ribosomal protein S4-B [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|311319705|gb|EFQ87929.1| hypothetical protein PTT_16383 [Pyrenophora teres f. teres 0-1]
          Length = 262

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+ LPL++ LRNRLKYAL  REV AILMQR V VDGKVRTD T+P+
Sbjct: 25  GAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRTDSTFPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI+DFIKFD G IVMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDLTTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EF TR  NV  IGK  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAYAIAG 261


>gi|340720134|ref|XP_003398498.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
           terrestris]
 gi|340720136|ref|XP_003398499.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
           terrestris]
 gi|350408329|ref|XP_003488370.1| PREDICTED: 40S ribosomal protein S4-like isoform 1 [Bombus
           impatiens]
 gi|350408333|ref|XP_003488371.1| PREDICTED: 40S ribosomal protein S4-like isoform 2 [Bombus
           impatiens]
          Length = 262

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 186/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITINKTGEYFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI LD+   KI D I+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIHLDIATGKILDSIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+D+ GH FATRL NVF IGKG+KP++SLP+ KG+KLSI EE  KR AA+ 
Sbjct: 205 FDICHIKDSQGHTFATRLNNVFIIGKGTKPYISLPRDKGVKLSIAEERDKRLAAKG 260


>gi|115402491|ref|XP_001217322.1| 40S ribosomal protein S4 [Aspergillus terreus NIH2624]
 gi|114189168|gb|EAU30868.1| 40S ribosomal protein S4-A [Aspergillus terreus NIH2624]
          Length = 239

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 186/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 3   GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTYPA 62

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 63  GFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 122

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+DL   KITDF++FD G + MVTGGRN GRVG++ +RE+H G 
Sbjct: 123 RTIRYPDPAIRVNDTVKVDLATGKITDFVRFDTGVVCMVTGGRNMGRVGVVTHRERHDGG 182

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 183 FNIVHIKDAIDNSFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAHAIA 238


>gi|451852241|gb|EMD65536.1| hypothetical protein COCSADRAFT_35575 [Cochliobolus sativus ND90Pr]
          Length = 262

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/238 (65%), Positives = 184/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+ LPL++ LRNRLKYAL  REV AILMQR V VDGKVRTD T+P 
Sbjct: 25  GAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KI+DFIKFD G IVMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDLSTGKISDFIKFDTGVIVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EF TR  NV  IGK  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAVDNEFTTRESNVIIIGK-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 261


>gi|332017152|gb|EGI57951.1| 40S ribosomal protein S4 [Acromyrmex echinatior]
          Length = 286

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 154/236 (65%), Positives = 187/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EVI I+MQR + VDGK+RTD  YPA
Sbjct: 49  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVIKIVMQRLIKVDGKIRTDPNYPA 108

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 109 GFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 168

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI LD+  +KI D I+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 169 RTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 228

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE  KR AA+ 
Sbjct: 229 FDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDKRLAAKG 284


>gi|154290538|ref|XP_001545862.1| 40S ribosomal protein S4 [Botryotinia fuckeliana B05.10]
 gi|347841950|emb|CCD56522.1| similar to 40S ribosomal protein S4 [Botryotinia fuckeliana]
          Length = 262

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 186/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPSIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVKLTIAEERDRRRAHAIAG 261


>gi|442755327|gb|JAA69823.1| Putative ribosomal protein s4 [Ixodes ricinus]
          Length = 262

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/236 (63%), Positives = 187/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS GPHK RE LPLI++LRNRLKYALT  EV  I+ QR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSPGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRLLYD KGRF LH +  EEAK+KLC+V+ VQ G KG+P++ T+D 
Sbjct: 85  GFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KI D+IKFD GN+ MVTGG N GRVG+I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+ GH FATRL  +F IGK +KP++SLP+GKGIKLS+ EE  +R  A++
Sbjct: 205 FDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLSVAEERDRRLQAKS 260


>gi|167045794|gb|ABZ10463.1| ribosomal protein S4, X-linked X isoform (predicted) [Callithrix
           jacchus]
          Length = 263

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 187/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+ PHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTSPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENF L+YDTKGRF +H +  EE K+KLCKV+ +  G KGIP++ T D 
Sbjct: 85  GFMDVISIDKTGENFHLIYDTKGRFAVHRITPEEVKYKLCKVQKIFVGTKGIPHLVTPDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TIRY DPLIK NDTI++DLE  KITDFI+FD GN+ MVT G N GR+G+I NRE+H GS
Sbjct: 145 HTIRYHDPLIKVNDTIQIDLETGKITDFIRFDTGNLCMVTRGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR  A+ ++
Sbjct: 205 FNVVHVKDANGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLVAKQSS 262


>gi|380795755|gb|AFE69753.1| 40S ribosomal protein S4, Y isoform 1 Y isoform, partial [Macaca
           mulatta]
          Length = 244

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 187/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G   P+PS+GPH+ RE LPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 6   GGYGPRPSTGPHQLREFLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 65

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 66  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITMGMKGIPHLETHDA 125

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KI +FIKF+ GN+ MV GG N GRVG+I NRE+H GS
Sbjct: 126 RTIRYPDPLIKVNDTVQIDLGTGKIINFIKFETGNVCMVIGGANLGRVGVITNRERHPGS 185

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKG++L+I EE  KR A + ++
Sbjct: 186 FDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGVRLTIAEERDKRLATKQSS 243


>gi|346469671|gb|AEO34680.1| hypothetical protein [Amblyomma maculatum]
          Length = 262

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 187/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI++LRNRLKYALT  EV  I+ QR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRLLYD KGRF LH +  EEAK+KLC+V+ VQ G KG+P++ T+D 
Sbjct: 85  GFMDVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+DL   KI D+IKFD GN+ MVTGG N GRVGII +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNMCMVTGGHNLGRVGIITSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++DA GH FATRL  +F IGK +KP++SLP+GKGIKL++ EE  +R   +A
Sbjct: 205 FDIVHVKDAQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLTVAEERDRRLQLKA 260


>gi|409041189|gb|EKM50675.1| hypothetical protein PHACADRAFT_264068 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 245

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 185/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT +EV++I+MQR V VD KVRTD TYPA
Sbjct: 7   GTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTAKEVLSIVMQRLVKVDNKVRTDPTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV+S+ K+ E+FRLLYD KGRF +H +  EEA +KL KV+ +  G KG+PYI T+DG
Sbjct: 67  GFQDVISLEKSGEHFRLLYDVKGRFTVHRITPEEATYKLLKVKKIGIGAKGVPYIITHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K + E  KITDF+KFD GNIVMVTGGRN GR G+I +REKH G 
Sbjct: 127 RTIRYPDPLIKVNDTVKFEFETGKITDFVKFDTGNIVMVTGGRNMGRAGVIVHREKHIGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           ++ +HI+D+L   FATR+ NVF IG+G KPW+SLP+GKG KL+I EE   R+  +AA
Sbjct: 187 YDIVHIKDSLDRTFATRISNVFVIGEGIKPWISLPRGKGTKLTITEERDVRRRQRAA 243


>gi|406868524|gb|EKD21561.1| 40S ribosomal protein S4 [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 262

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPRASPGPHKLRDCMPLIVFIRNRLKYALNARETKAIVMQRLIKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KLSI EE  +R+A   A+
Sbjct: 205 FNIVHIKDAIDNSFATRENNVFVIGS-EKPWISLPKGKGVKLSIAEERDRRRAHAIAS 261


>gi|296424161|ref|XP_002841618.1| 40S ribosomal protein S4 [Tuber melanosporum Mel28]
 gi|295637863|emb|CAZ85809.1| unnamed protein product [Tuber melanosporum]
          Length = 342

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/233 (63%), Positives = 184/233 (78%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+C+PL++ +RNRLKYAL  REV AI+MQR V VDGKVRTD T+PA
Sbjct: 107 GKYAPRPSPGPHKLRDCMPLVVFIRNRLKYALNSREVKAIVMQRLVKVDGKVRTDPTFPA 166

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YDTKGRF +H + + EA +KL KV+ VQ G KGIPY+ T+D 
Sbjct: 167 GFMDVITIEKTGERFRLIYDTKGRFTIHRITETEASYKLAKVKRVQLGAKGIPYLVTHDA 226

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+D+E  KI DFI+FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 227 RTIRYPDPTIRVNDTVKIDIETGKIIDFIRFDTGTIAMATGGRNMGRVGVITHRERHDGG 286

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +HI+DA+ + FATRL NVF +G   KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 287 FDIVHIKDAIDNTFATRLSNVFIVGP-DKPWISLPKGKGVKLTIAEERDRRRA 338


>gi|67537248|ref|XP_662398.1| hypothetical protein AN4794.2 [Aspergillus nidulans FGSC A4]
 gi|40741174|gb|EAA60364.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 239

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/237 (62%), Positives = 186/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 3   GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTYPA 62

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 63  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTHDA 122

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDF +FD G + MVTGGRN GRVG++ +RE+H G 
Sbjct: 123 RTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHRERHDGG 182

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 183 FNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRAYALA 238


>gi|47208976|emb|CAF90008.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 237

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 186/238 (78%), Gaps = 8/238 (3%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPT 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 67  GFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD G         N GR+G+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTVRIDLESGKITDFIKFDTGA--------NLGRIGVITNRERHPGS 178

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++D  G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ A+
Sbjct: 179 FDVVHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 236


>gi|392589813|gb|EIW79143.1| 40S ribosomal protein S4 [Coniophora puteana RWD-64-598 SS2]
          Length = 263

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 184/237 (77%), Gaps = 2/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYAL+  EV  I+ QR + VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRNRLKYALSGSEVTKIVKQRLIKVDGKVRTDNTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD +SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR V  G K +PYI T+DG
Sbjct: 85  GFMDTISIEKSGEHFRLLYDVKGRFTIHRITPEEASYKLLKVRKVAVGAKSVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K DLE+NKI +F KFD GN+VMVTGGRN GR G+I +RE+H G 
Sbjct: 145 RTIRYPDPLIKVNDTVKFDLEQNKILEFAKFDTGNLVMVTGGRNMGRAGVITHRERHIGD 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE--ARKRQAAQ 281
           F+ +H++D+L   FATR+ N+F IG+G+KPW+SLPKGKG+KL+I EE   R+RQ + 
Sbjct: 205 FDIVHVKDSLDRTFATRISNIFVIGEGNKPWISLPKGKGVKLTISEERDMRRRQRSS 261


>gi|169595016|ref|XP_001790932.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
 gi|111070616|gb|EAT91736.1| hypothetical protein SNOG_00241 [Phaeosphaeria nodorum SN15]
          Length = 262

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+ LPL++ LRNRLKYAL  REV AILMQR V VDGKVRTD T+P+
Sbjct: 25  GAYAPKASPGPHKLRDSLPLVIFLRNRLKYALNAREVNAILMQRLVKVDGKVRTDSTFPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL KV+ VQ G+ GIPY+ T+D 
Sbjct: 85  GLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGKVKRVQLGKGGIPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   K++DFIKFD G IVMVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDLSTGKVSDFIKFDTGVIVMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +H++DA+ +EF TR  NV  IGK  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHLKDAVDNEFTTRETNVIVIGK-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 261


>gi|148691968|gb|EDL23915.1| mCG1288 [Mus musculus]
          Length = 266

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/234 (64%), Positives = 184/234 (78%), Gaps = 3/234 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+GPHK RECLP I+ LRNRLKYALT  EV  I MQR + +DGK+RT   YPA
Sbjct: 25  GVFAPSPSTGPHKLRECLPPIIFLRNRLKYALTGDEVKKICMQRFIKIDGKIRTGFIYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT RYPDPLIK N TI++DLE  K+TDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTTRYPDPLIKVNVTIQIDLETGKVTDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+ +H++DA G  FATRL N+F IGKG+K W+SLP+GKGI+L+I EE   RQ A
Sbjct: 205 FDVVHVKDANGKSFATRLSNIFVIGKGNKSWISLPRGKGIRLTIAEE---RQEA 255


>gi|299745325|ref|XP_001831641.2| 40S ribosomal protein S4 [Coprinopsis cinerea okayama7#130]
 gi|298406535|gb|EAU90174.2| 40s ribosomal protein s4 [Coprinopsis cinerea okayama7#130]
          Length = 263

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 152/238 (63%), Positives = 187/238 (78%), Gaps = 3/238 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A +PS GPHK RE LPL + LRNRLKYALT REV +I+ QR + +DGKVRTD TYPA
Sbjct: 25  GTYASRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTSIVKQRLIKIDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA +KL KV+ V  G +G+P++ T+DG
Sbjct: 85  GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATYKLLKVKRVALGARGVPHVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K DLE+NKITDF+KFD GN+V+VTGGRN GR G I ++EKH G 
Sbjct: 145 RTIRYPDPLIKVNDTVKFDLEQNKITDFVKFDTGNLVIVTGGRNMGRAGTIVHKEKHVGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE---ARKRQAAQ 281
           F+ +HI+D+L   FATR+ NVF IG+G+K W+SLPKGKG+KL+I EE    RKR AA 
Sbjct: 205 FDIVHIKDSLDRTFATRVSNVFVIGEGTKAWISLPKGKGLKLTIAEERDVRRKRAAAD 262


>gi|119493023|ref|XP_001263767.1| 40S ribosomal protein S4 [Neosartorya fischeri NRRL 181]
 gi|119411927|gb|EAW21870.1| 40S ribosomal protein S4, putative [Neosartorya fischeri NRRL 181]
          Length = 261

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 186/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDF++FD G + MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDIATGKITDFVRFDTGVVCMVTGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A   A
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRAYALA 260


>gi|145245281|ref|XP_001394908.1| 40S ribosomal protein S4 [Aspergillus niger CBS 513.88]
 gi|134079606|emb|CAK40823.1| unnamed protein product [Aspergillus niger]
 gi|350631620|gb|EHA19991.1| hypothetical protein ASPNIDRAFT_199495 [Aspergillus niger ATCC
           1015]
 gi|358369177|dbj|GAA85792.1| 40S ribosomal protein S4 [Aspergillus kawachii IFO 4308]
          Length = 258

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/235 (63%), Positives = 184/235 (78%), Gaps = 1/235 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KI DF+KFD G + M TGGRN GRVG++ +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDIATGKIADFVKFDTGVVAMATGGRNMGRVGVVTHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A Q
Sbjct: 205 FNIVHIKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRALQ 258


>gi|361125389|gb|EHK97435.1| putative 40S ribosomal protein S4-B [Glarea lozoyensis 74030]
          Length = 262

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GSYAPRPSAGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDFIKFD G I MVTGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMVTGGRNIGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRENNVFVIGS-EKPWISLPKGKGVKLTIAEERDRRRAHAIAG 261


>gi|156035911|ref|XP_001586067.1| 40S ribosomal protein S4 [Sclerotinia sclerotiorum 1980 UF-70]
 gi|154698564|gb|EDN98302.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 262

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S+GPHK R+C+PLI+ +RNRLKYAL  RE  AILMQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPRASAGPHKLRDCMPLIVFIRNRLKYALNSRETKAILMQRLIKVDGKVRTDATYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT+ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTSENFRLVYDTKGRFTVHRIQAEEAEYKLAKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KL+I EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNSFATRESNVFVIG-AEKPWISLPKGKGVKLTIAEERDRRRAHAIAG 261


>gi|259482360|tpe|CBF76769.1| TPA: 40S ribosomal protein S4, putative (AFU_orthologue;
           AFUA_3G06840) [Aspergillus nidulans FGSC A4]
          Length = 261

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 148/233 (63%), Positives = 185/233 (79%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGRETKAIMMQRLIQVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKKVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDF +FD G + MVTGGRN GRVG++ +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDIATGKITDFCRFDTGVVCMVTGGRNMGRVGVVTHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A
Sbjct: 205 FNIVHVKDAIDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSIAEERDRRRA 256


>gi|307191745|gb|EFN75187.1| 40S ribosomal protein S4 [Harpegnathos saltator]
          Length = 262

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 185/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  ILMQR + VDGK+RTD  YPA
Sbjct: 25  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKILMQRLIKVDGKIRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G KGIP++ T+DG
Sbjct: 85  GFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVRRVQTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI LD+   KI D I+FD GN+ M+T GRN GRVG + +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIHLDIASGKILDSIRFDSGNLCMITSGRNLGRVGTVVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  H++DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE  +R AA+ 
Sbjct: 205 FDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDRRLAAKG 260


>gi|296804264|ref|XP_002842984.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
 gi|238845586|gb|EEQ35248.1| 40S ribosomal protein S4 [Arthroderma otae CBS 113480]
          Length = 259

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/233 (65%), Positives = 186/233 (79%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE  +ILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQTEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+D+   KITDFIKFD G I M TGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPNIRVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|94468404|gb|ABF18051.1| 40S ribosomal protein S4 [Aedes aegypti]
          Length = 262

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 186/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRH+ +DGKVRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 85  GFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  ND+I+ D+   K+ D +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +H++DA GH FATRL NVF IGK +K ++SLPKGKG+KLSI EE  KR A++AA
Sbjct: 205 FEIVHVKDATGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDKRLASKAA 261


>gi|61654708|gb|AAX48880.1| S4 [Suberites domuncula]
          Length = 261

 Score =  320 bits (821), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 154/235 (65%), Positives = 185/235 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK REC+PL++ LRNRLKYALT  EV  I+ QR + VD KVRTD T+PA
Sbjct: 25  GKFAPRPSPGPHKLRECIPLVVFLRNRLKYALTADEVKRIVKQRLIKVDAKVRTDPTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT ENFRLLYD KGRF +H +  EEA +KL KVR +Q G+KGIPY  T+DG
Sbjct: 85  GFMDVVSIDKTGENFRLLYDIKGRFTVHRISPEEASYKLXKVRRIQLGKKGIPYCVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  NDT+++DL   KITD IKFD+GN+VMVTGGRN GRVGII NRE+H GS
Sbjct: 145 RTIRYPDPVINVNDTVRIDLSTGKITDSIKFDIGNLVMVTGGRNLGRVGIITNRERHHGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ IH++DA G  FATR+ NVF IGKG+K  VS+P+ KGI+L+I EE  +R  A+
Sbjct: 205 FDIIHVKDAAGKSFATRMTNVFVIGKGNKAMVSIPRQKGIRLTIAEERDRRLEAK 259


>gi|321450822|gb|EFX62690.1| hypothetical protein DAPPUDRAFT_300650 [Daphnia pulex]
          Length = 244

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 150/219 (68%), Positives = 178/219 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVVFLRNRLKYALNNSEVTKIVMQRLIKVDGKVRTDSNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KLCKVR VQ G KGIP+I T+DG
Sbjct: 85  GFMDVITIDKTGEYFRLVYDVKGRFAIHRITAEEAKYKLCKVRRVQVGPKGIPFITTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDTI+LD+  NKI DFIKFD GN+ M+TGGRN GRVG I NRE+H GS
Sbjct: 145 RTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLCMITGGRNLGRVGTIINRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 265
           F+ +H++DALGH FATRL NVF IGKGSK ++SLP+ KG
Sbjct: 205 FDIVHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 243


>gi|327305991|ref|XP_003237687.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
 gi|326460685|gb|EGD86138.1| 40S ribosomal protein S4 [Trichophyton rubrum CBS 118892]
          Length = 259

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 152/233 (65%), Positives = 185/233 (79%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE  +ILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+D+   KITDFIKFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPSIRVNDTVKIDIATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPWVSLPKGKG+KL+I EE  +R+A
Sbjct: 205 FGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 256


>gi|344304439|gb|EGW34671.1| ribosomal protein S4 [Spathaspora passalidarum NRRL Y-27907]
          Length = 262

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 185/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYAL  REV AILMQ+HV VD KVRTD T+P 
Sbjct: 25  GTYAPRPSAGPHKLRESLPLVVFLRNRLKYALNGREVKAILMQQHVKVDAKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL+YD KGRF +H +  EEA +KL KV+ VQ G+KGIPY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLIYDVKGRFAVHRISAEEAAYKLGKVKKVQLGKKGIPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ NDT+K+DL   KI+DFI FD G +VMVTGGRN GRVG I ++E H G 
Sbjct: 145 RTIRYPDPLIRVNDTVKIDLATGKISDFIPFDTGRLVMVTGGRNLGRVGAIVHKEHHAGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+D+L + F TRL NVF IG +  KPWVSLPKGKGIKL+I EE  +R+  Q 
Sbjct: 205 FDLVHIKDSLDNTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLTISEERDRRRTQQG 261


>gi|326471544|gb|EGD95553.1| 40S ribosomal protein S4 [Trichophyton tonsurans CBS 112818]
 gi|326481846|gb|EGE05856.1| 40S ribosomal protein S4 [Trichophyton equinum CBS 127.97]
          Length = 259

 Score =  320 bits (820), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 151/233 (64%), Positives = 185/233 (79%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE  +ILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+D+   KITDF+KFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPSIRVNDTVKIDIATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPWVSLPKGKG+KL+I EE  +R+A
Sbjct: 205 FGIVHIKDAIDNTFATRESNVFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 256


>gi|258573501|ref|XP_002540932.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
 gi|237901198|gb|EEP75599.1| 40S ribosomal protein S4 [Uncinocarpus reesii 1704]
          Length = 262

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD T+P 
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRETNAILMQRLVKVDGKVRTDSTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRISGEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KI+DFIKFD G I MVTGGRN GRVG+I +RE+H+G 
Sbjct: 145 RTIRYPDPAIKVNDTVKIDIATGKISDFIKFDTGVICMVTGGRNMGRVGVITHRERHEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ + FATR  NVF IG   KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FGIVHIKDAIDNSFATRESNVFVIGH-EKPWISLPKGKGVKLSIAEERDRRRAVALAG 261


>gi|322784955|gb|EFZ11726.1| hypothetical protein SINV_08231 [Solenopsis invicta]
          Length = 261

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 186/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 24  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 84  GFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI LD+  +KI D I+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 144 RTIRYPDPVIKVNDTIHLDIATSKILDSIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+DA GH FATRL NVF IGKG+K +VSLP+ KG+KLSI EE  KR AA+ 
Sbjct: 204 FDICHIKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGVKLSIAEERDKRLAAKG 259


>gi|326523807|dbj|BAJ93074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 269

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 152/240 (63%), Positives = 191/240 (79%), Gaps = 2/240 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RE LPL+++LR+RLKYALT +EV  I+MQR V VDGK RTD T+PA
Sbjct: 25  GVFAPRPSSGPHKLRESLPLVILLRDRLKYALTRKEVTMIMMQRLVKVDGKTRTDNTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KTNE FRLLYDTKGRF +  +   EAK+KL KV+ +  G KGIPY++T+DG
Sbjct: 85  GFMDVISIEKTNETFRLLYDTKGRFAVQRITPAEAKYKLLKVKKIYTGTKGIPYLSTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +DT+K DLE  KITD   F++GN+VM+TGG N GRVG+I +RE+H GS
Sbjct: 145 RTIRYPDPAIKIHDTVKYDLESGKITDIAPFELGNLVMITGGANLGRVGVIVSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA--RKRQAAQAAA 284
           F+ IH++DA+G +FATR+ NVF IGKG+K  VSLP  KGIK S++EEA   ++ AA+ AA
Sbjct: 205 FDIIHVKDAVGQQFATRMSNVFVIGKGTKSLVSLPARKGIKKSVLEEADFARKHAAELAA 264


>gi|392576968|gb|EIW70098.1| hypothetical protein TREMEDRAFT_43729 [Tremella mesenterica DSM
           1558]
          Length = 263

 Score =  319 bits (818), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 149/224 (66%), Positives = 179/224 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL +VLRNRLKYALT +EV +I+MQR + VDGKVRTD+TYP 
Sbjct: 25  GTYAPRPSPGPHKLRECLPLTVVLRNRLKYALTGKEVTSIVMQRTIKVDGKVRTDETYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I ++ ENFRLLYD KGRF +H +  EEA FKLCKVR  Q G KG+PY+ T+DG
Sbjct: 85  GFMDVITIDRSGENFRLLYDVKGRFTVHRISPEEATFKLCKVRKHQLGPKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDTIK D  +NK+   IKF+VGN+VMVTGGRN GR G+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTIKYDFVQNKVVGIIKFEVGNVVMVTGGRNMGRSGVIVHRERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++D L   FATRL N+F IG+GSK  VSLPKGKG+KLSI
Sbjct: 205 FDIVHVRDVLDRTFATRLSNIFVIGEGSKVQVSLPKGKGVKLSI 248


>gi|315047114|ref|XP_003172932.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
 gi|311343318|gb|EFR02521.1| 40S ribosomal protein S4 [Arthroderma gypseum CBS 118893]
          Length = 259

 Score =  319 bits (818), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 150/233 (64%), Positives = 185/233 (79%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE  +ILMQR V VDGKVRTD TYPA
Sbjct: 25  GAYAPRPSPGPHKLRDCLPLIVFLRNRLKYALNGRETNSILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H ++ EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K+D+   KITD++KFD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPSIRVNDTVKIDIATGKITDYVKFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  +HI+DA+ + FATR  NVF IG+  KPW+SLPKGKG+KL+I EE  +R+A
Sbjct: 205 FGIVHIKDAIDNTFATRESNVFVIGQ-EKPWISLPKGKGVKLTIAEERDRRRA 256


>gi|452987335|gb|EME87091.1| hypothetical protein MYCFIDRAFT_162640 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 262

 Score =  319 bits (817), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 186/237 (78%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+C+PLI+ +RNRLKYAL  REV  I+MQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREVKQIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H + +EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K++LE  KI DFI+FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A
Sbjct: 205 FNIVHIKDAIDNEFATRETNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALA 260


>gi|395514460|ref|XP_003761435.1| PREDICTED: 40S ribosomal protein S4-like [Sarcophilus harrisii]
          Length = 263

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 147/238 (61%), Positives = 186/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+G HK +ECLPLI+ LRNRLKYALT  EV  I MQ  + +DGK+ TD TYPA
Sbjct: 25  GVFAPRPSTGSHKLKECLPLIIFLRNRLKYALTEDEVKKICMQHFIKIDGKIHTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  E+F L+YDTKG F +H +  E AK+KLCK R +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKMGEHFHLVYDTKGCFAVHHITVEAAKYKLCKARKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IRYPDPLIK NDT+++DLE+ KITDFIKFD  N+ MVTGG N GR+G+I NREKH GS
Sbjct: 145 RAIRYPDPLIKVNDTVQIDLEDGKITDFIKFDTSNLCMVTGGANLGRIGVITNREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+S P+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISPPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|452837123|gb|EME39066.1| ribosomal protein S4e-like protein [Dothistroma septosporum NZE10]
          Length = 262

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+C+PL++ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GAYAPKASPGPHKLRDCMPLVVFIRNRLKYALNTRETKAIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVISIEKTGENFRLVYDTKGRFTVHRITTEEAEYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ NDT+K++LE  KI DFI+FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIRVNDTVKINLETGKIEDFIRFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 205 FNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAHALAG 261


>gi|109509108|gb|ABG34271.1| 40S ribosomal protein S4 [Culex pipiens pallens]
          Length = 262

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 187/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRH+ +DGKVRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEVTRIVMQRHIKIDGKVRTDINYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT+ENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 85  GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  ND+I+ D+   K+ D +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +HI+D+ GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE  KR A++AA
Sbjct: 205 FEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVKLSIAEERDKRLASKAA 261


>gi|170034084|ref|XP_001844905.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
 gi|167875313|gb|EDS38696.1| 40S ribosomal protein S4 [Culex quinquefasciatus]
          Length = 263

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 187/237 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRH+ +DGKVRTD  YPA
Sbjct: 26  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNNEVTRIVMQRHIKIDGKVRTDINYPA 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT+ENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 86  GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  ND+I+ D+   K+ D +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 146 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRCGTVIQREKHPGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +HI+D+ GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE  KR A++AA
Sbjct: 206 FEIVHIKDSTGHVFATRLTNVFIIGKGTKAFISLPKGKGVKLSIAEERDKRLASKAA 262


>gi|453079891|gb|EMF07943.1| 40S ribosomal protein S4 [Mycosphaerella populorum SO2202]
          Length = 261

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 152/237 (64%), Positives = 188/237 (79%), Gaps = 2/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGRETKAIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV++I KT ENFRL+YDTKGRF +H + +EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 85  GYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEAQYKLGKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K++LE  KI DFI+FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVNLETGKIDDFIRFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA-AQA 282
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A AQA
Sbjct: 205 FNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAYAQA 260


>gi|119632119|gb|EAX11714.1| hCG38986, isoform CRA_b [Homo sapiens]
          Length = 245

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 187/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQ  + +DGKVR D TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF+DV+SI KT E+FRL+Y+TKG F +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT FIKFD GN+ MV  G N GRVG+I NRE+H GS
Sbjct: 127 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 187 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 244


>gi|332376168|gb|AEE63224.1| unknown [Dendroctonus ponderosae]
          Length = 261

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 187/236 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KGRF +H +  EEAK+KLCKVR V  G KGIP++ T+DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVRKVGTGPKGIPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI+L++  +KI D+IKF+ GN+  +TGGRN GRVG + NRE+H GS
Sbjct: 145 RTIRYPDPNVKVNDTIQLEIATSKILDYIKFESGNLCQITGGRNLGRVGTVVNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DA  H FATRL NVF IGKGSK +VSLP+GKG+KLSI EE  KR A++ 
Sbjct: 205 FDIVHIKDANEHVFATRLNNVFIIGKGSKAFVSLPRGKGVKLSIAEERDKRLASKT 260


>gi|193610901|ref|XP_001949785.1| PREDICTED: 40S ribosomal protein S4-like [Acyrthosiphon pisum]
          Length = 265

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 150/238 (63%), Positives = 189/238 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALTGAEVTKIVMQRLIKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT+E+FRL+YD KGRF +H +  EEAK+KLCKV+ VQ G KG+P++ T+DG
Sbjct: 85  GFMDVISIQKTSEHFRLIYDVKGRFTIHRITPEEAKYKLCKVKKVQTGPKGVPFLTTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDTI+ D+  +KI D I+F+ GN+ M+TGGRN GRVGI+ NRE+H GS
Sbjct: 145 RTIRYPDPNIKVNDTIRYDIATSKILDHIRFETGNLCMITGGRNLGRVGIVINRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+DA  H FATR+ NVF IGKG K ++SLP+ KG+KL+I EE  KR AA+  +
Sbjct: 205 FDIVHIKDANEHIFATRMNNVFIIGKGQKNYISLPRSKGVKLTISEERDKRLAAKTKS 262


>gi|88703062|ref|NP_001034656.1| 40S ribosomal protein S4, Y isoform 2 [Homo sapiens]
 gi|27805713|sp|Q8TD47.3|RS4Y2_HUMAN RecName: Full=40S ribosomal protein S4, Y isoform 2
 gi|20269858|gb|AAM18074.1|AF497481_1 ribosomal protein S4 [Homo sapiens]
          Length = 263

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 187/238 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQ  + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF+DV+SI KT E+FRL+Y+TKG F +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL   KIT FIKFD GN+ MV  G N GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 CDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 262


>gi|353240563|emb|CCA72427.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
           DSM 11827]
          Length = 262

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 148/236 (62%), Positives = 183/236 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LR RL+YALT REV  IL QR V VDGKVRTD  YP 
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTIFLRRRLQYALTGREVTTILAQRLVKVDGKVRTDIKYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV++I K+ E+FRLLYD KGRF +H +  EEA +KLCKV+ V  G +G+PYI T+DG
Sbjct: 85  GFQDVITIEKSGEHFRLLYDVKGRFAIHRITPEEATYKLCKVKKVLIGNRGVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K DLE+ KIT F+KFD GN+V+VTGGRN GRVG I +RE+H G 
Sbjct: 145 RTIRYPDPDIKTNDTVKYDLEQGKITGFVKFDTGNVVVVTGGRNMGRVGTITHRERHIGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D L   FATR+ N+F IG+G+KPW+SLPKGKG+KL+I EE  +R+ A+A
Sbjct: 205 FDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKLTISEERDQRRRAKA 260


>gi|440791779|gb|ELR13017.1| ribosomal family s4e, putative [Acanthamoeba castellanii str. Neff]
          Length = 242

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 151/235 (64%), Positives = 187/235 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS+GPHK REC PL+++LRNRLKYALT +EV +ILMQR V VDGKVRTD T+PA
Sbjct: 3   GTWAPKPSAGPHKMRECFPLVILLRNRLKYALTKKEVTSILMQRLVKVDGKVRTDPTFPA 62

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV++I KT+E FRLLYDTKGRF  H +  EE+K+KL KVR V+ G+KGIPY+ T+DG
Sbjct: 63  GFQDVITIEKTDEVFRLLYDTKGRFIAHRISAEESKYKLGKVRRVEIGKKGIPYLVTHDG 122

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +DT+K+DLE  KI D +KF+ GN+ MVT GRN GRVG++++RE+H GS
Sbjct: 123 RTIRYPDPSIKVHDTVKIDLETGKIVDHVKFEAGNLCMVTAGRNIGRVGLMESRERHAGS 182

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ IH++DA G  FATR  NVF IG+ +K  VSLPK KGIK SII+E + R A +
Sbjct: 183 FDIIHVKDAAGQTFATRGSNVFIIGQTTKSLVSLPKRKGIKTSIIQEQQHRLAKE 237


>gi|339245843|ref|XP_003374555.1| 40S ribosomal protein S4 [Trichinella spiralis]
 gi|316972227|gb|EFV55914.1| 40S ribosomal protein S4 [Trichinella spiralis]
          Length = 263

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 182/236 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPLIL +RNRLKYALTY E   I+MQR + VDGKVRTD TYPA
Sbjct: 25  GTFAPRPSPGPHKLRECLPLILFIRNRLKYALTYDEAKKIMMQRLIKVDGKVRTDLTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I +T E+FRL+YD KGR+ +H +  EE+K KLCKVR V  G K IP I T+DG
Sbjct: 85  GFMDVITIDRTGEHFRLIYDVKGRYVVHRISHEESKLKLCKVRKVMVGPKNIPMIITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIKAND+I  ++E+NKI DF+KFD GN+ MVTGG N GRVGII +RE+H GS
Sbjct: 145 RTIRYPDPLIKANDSIVYNIEKNKIVDFVKFDTGNVCMVTGGHNVGRVGIITHRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D  G  FATRL  +F IGKG  P +SLP  KGIKLSI +E  KR AA+ 
Sbjct: 205 FDIVHVRDTTGSTFATRLNYIFVIGKGKDPLISLPSCKGIKLSIGDERAKRLAAKT 260


>gi|340372095|ref|XP_003384580.1| PREDICTED: 40S ribosomal protein S4-like [Amphimedon queenslandica]
          Length = 262

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/236 (64%), Positives = 185/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK REC+PL++ LRNRLKYALT  EV  I+ QR + VDGKVRTD T+PA
Sbjct: 25  GRYAPRPSPGPHKLRECIPLMVFLRNRLKYALTGDEVKKIVKQRLIKVDGKVRTDTTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV+I KT+E FRLLYD KGRF +H +  EEAK+KL KV+  Q G KGIPY+ T+DG
Sbjct: 85  GLMDVVTIEKTSEQFRLLYDVKGRFCVHRITPEEAKYKLGKVKRAQLGPKGIPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++D+   KITDF+KFDVGN+VMV GGRN GRVG+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDIATGKITDFVKFDVGNLVMVVGGRNLGRVGVITNRERHHGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ IHI+DA G+ FATR  NVF IGK +K  +SLPK KGI+L+I EE  +R  A+ 
Sbjct: 205 FDIIHIKDAKGNTFATRQTNVFVIGKNNKALISLPKAKGIRLTIAEERDRRLQAKG 260


>gi|221110073|ref|XP_002154886.1| PREDICTED: 40S ribosomal protein S4-like [Hydra magnipapillata]
          Length = 259

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 149/232 (64%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS GPHK RECLPLI+ LRNRLKYAL Y EV  I+ QR + VDGKVRTD  YPAGFM
Sbjct: 28  APRPSPGPHKLRECLPLIVFLRNRLKYALNYAEVTKIMKQRLIKVDGKVRTDICYPAGFM 87

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSI +T+ENFRLLYD KGRF  + +  EE+ +KL KV+    GQ  IPYI T+DGRTI
Sbjct: 88  DVVSIERTHENFRLLYDVKGRFVCNRISAEESAYKLAKVKRSAVGQNSIPYIVTHDGRTI 147

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDT+ +D++  KITDFIKFD GN+VMVT GRN GRVGII NRE+H  S++ 
Sbjct: 148 RYPDPSIKVNDTVIVDIKTGKITDFIKFDTGNLVMVTAGRNTGRVGIITNRERHPSSYDI 207

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D  G++FATRL N+F IGKGSKP VSLP+GKG++L+I +E  +R A +
Sbjct: 208 VHVKDVTGNQFATRLSNIFLIGKGSKPLVSLPRGKGVRLTIADERDRRMANK 259


>gi|1350992|sp|P47837.1|RS4_CANAL RecName: Full=40S ribosomal protein S4; AltName: Full=S7
 gi|1051260|gb|AAC49871.1| ribosomal protein S7 [Candida albicans]
          Length = 262

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 153/237 (64%), Positives = 184/237 (77%), Gaps = 1/237 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPH  RE LPL + LRNRL YAL  REV AI+MQ+HV V GKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHXLRESLPLXVFLRNRLXYALCGREVKAIMMQQHVQVVGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNE+FRL YD KG+F +H +  EEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 85  GFMDVITLEATNEHFRLAYDVKGKFAVHRISAEEAVYKLGKVKKVQLGKKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLI+ANDT+K+DL   KI  FIKFD G +VMVTGGRN GRVG+I +REK +G 
Sbjct: 145 RTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +HI+DAL + F TRL NVF IG +  KPWVSLPKGKGIKLSI EE  +R A Q 
Sbjct: 205 FDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRRXAQQG 261


>gi|296470845|tpg|DAA12960.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
          Length = 233

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 149/232 (64%), Positives = 182/232 (78%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           PS+GPHK RECLP    LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPAGFMDV+
Sbjct: 1   PSTGPHKLRECLPXNHFLRNRLKYALTGDEVKKICMQXFIKIDGKVRTDITYPAGFMDVI 60

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
            I KT ENF L+YDTKGRF +H +  +EAK+KLCKVR +  G KGIP++ T+D R IRYP
Sbjct: 61  GIDKTGENFCLIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYP 120

Query: 173 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DPLIK NDTI++DLE  KI DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 121 DPLIKVNDTIQIDLETGKIIDFIKFDTGNLCMVTGGANLGRIGVISNRERHLGSFDVVHV 180

Query: 233 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +DA G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 181 KDANGNSFATWLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 232


>gi|449301876|gb|EMC97885.1| hypothetical protein BAUCODRAFT_155152 [Baudoinia compniacensis
           UAMH 10762]
          Length = 263

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 183/238 (76%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S+GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD  YPA
Sbjct: 26  GTYAPKASAGPHKLRDCMPLIVFIRNRLKYALNTRETKAIVMQRLIQVDGKVRTDPNYPA 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDV++I KT ENFRL+YDTKGRF +H + +EE  +KL KV+ VQ G+ GIP++ T+D 
Sbjct: 86  GYMDVITIEKTGENFRLVYDTKGRFTVHRITEEEGGYKLGKVKRVQLGKGGIPFLVTHDA 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL   KITDF+ FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 146 RTIRYPDPAIKVNDTVKIDLATGKITDFVHFDTGVIAMATGGRNMGRVGVITHRERHDGG 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 206 FNVVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 262


>gi|426243307|ref|XP_004015500.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
          Length = 251

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 186/238 (78%), Gaps = 12/238 (5%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NR++H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRKRHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ F            G+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 205 FDVVHVKDANGNSF------------GNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 250


>gi|256072591|ref|XP_002572618.1| 40S ribosomal protein S4 [Schistosoma mansoni]
 gi|360044251|emb|CCD81798.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
          Length = 245

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 148/235 (62%), Positives = 182/235 (77%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL + LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 10  APRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 69

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKV+ V  G  G+PYI T+D RTI
Sbjct: 70  DVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPYIVTHDARTI 129

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 130 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 189

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+  A
Sbjct: 190 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEERDKRIRARRLA 244


>gi|395754117|ref|XP_003780546.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, X isoform
           [Pongo abelii]
          Length = 319

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 152/236 (64%), Positives = 186/236 (78%), Gaps = 1/236 (0%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 83  APRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFM 142

Query: 110 DVVSIPKTNENFRLLYDT-KGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           DV+SI KT ENF     T +  F +H +  EEAK+KLCKVR +  G KGIP++ T+D RT
Sbjct: 143 DVISIDKTGENFPSGSMTPRVAFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDART 202

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           IRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+
Sbjct: 203 IRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFD 262

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            +H++DA G+ FATRL N+F IGKG+K W+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 263 VVHVKDANGNSFATRLSNIFVIGKGNKSWISLPRGKGIRLTIAEERDKRLAAKQSS 318


>gi|226469682|emb|CAX76671.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
          Length = 245

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL ++LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 10  APRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 69

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKVR V  G  G+P+I T+D RTI
Sbjct: 70  DVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPFIVTHDARTI 129

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 130 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 189

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+
Sbjct: 190 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRAR 241


>gi|256072589|ref|XP_002572617.1| 40S ribosomal protein S4 [Schistosoma mansoni]
 gi|360044250|emb|CCD81797.1| putative 40s ribosomal protein S4 [Schistosoma mansoni]
          Length = 264

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/235 (62%), Positives = 182/235 (77%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL + LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKV+ V  G  G+PYI T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPYIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+  A
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKNRGIRLSIIEERDKRIRARRLA 263


>gi|29841450|gb|AAP06482.1| SJCHGC06323 protein [Schistosoma japonicum]
 gi|226469680|emb|CAX76670.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226469684|emb|CAX76672.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226469688|emb|CAX76674.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226469694|emb|CAX76677.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226473022|emb|CAX71197.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226473024|emb|CAX71198.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226473026|emb|CAX71199.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
 gi|226473028|emb|CAX71200.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
          Length = 264

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL ++LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKVR V  G  G+P+I T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPFIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRAR 260


>gi|226469686|emb|CAX76673.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
          Length = 264

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL ++LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKVR V  G  G+P+I T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPFIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRAR 260


>gi|226469692|emb|CAX76676.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
          Length = 264

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL ++LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKVR V  G  G+P+I T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPFIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRAR 260


>gi|226469690|emb|CAX76675.1| ribosomal protein S4, X-linked [Schistosoma japonicum]
          Length = 264

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 182/232 (78%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL ++LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCILLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKVR V  G  G+P+I T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQCIHPDEAKYKLCKVRKVLVGHGGVPFIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D+ GH+F TRL N+F IGK +KPW+SLPK +GI+LSIIEE  KR  A+
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNKPWISLPKSRGIRLSIIEERDKRIRAR 260


>gi|440897387|gb|ELR49092.1| hypothetical protein M91_06956 [Bos grunniens mutus]
          Length = 263

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/235 (62%), Positives = 185/235 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+ PHK RE LPLI+ LRNRLKYALT  EV  I MQR + +DGKV TD TYPA
Sbjct: 25  GVFAPRPSTSPHKLREYLPLIIFLRNRLKYALTGDEVKKICMQRFINIDGKVSTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENF L+YDTKGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTRENFCLIYDTKGRFAVHRITPEEAKYKLCKVKKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TI YP PLIK NDTI++DLE  +ITDFIKFD GN+ MVTGG N GR+G+I N+E+H GS
Sbjct: 145 HTIHYPHPLIKVNDTIQIDLETGRITDFIKFDTGNLCMVTGGANLGRIGVITNQERHSGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
            + +H++D  G+ FAT+L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 205 SDVVHVKDVNGNSFATQLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259


>gi|401888387|gb|EJT52345.1| hypothetical protein A1Q1_04556 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|406696387|gb|EKC99677.1| hypothetical protein A1Q2_05987 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 262

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/238 (62%), Positives = 187/238 (78%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNR+KYALT +EV AI+ QR + VDGKVRTD+T+PA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTVFLRNRMKYALTGKEVTAIVKQRLIQVDGKVRTDETFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FRLLYD KGRF +H +  EEA FKLCKV+  Q G KG+PY+ T+DG
Sbjct: 85  GFMDVISIEKSGEHFRLLYDVKGRFTIHRITPEEATFKLCKVKKCQLGAKGVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDTIK D ++NKIT  +KF+ GN+VM+TGGRN GR G+I ++E+H G 
Sbjct: 145 RTIRYPDPNIKVNDTIKFDFQQNKITGHLKFEPGNVVMITGGRNMGRSGVIVHKERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE-ARKRQAAQAA 283
           F+ +H++D L   FATR+GNVF IG+G+K  VSLPKGKG+KL+I EE  +KR+  Q A
Sbjct: 205 FDIVHVRDVLDRTFATRIGNVFVIGEGAKAQVSLPKGKGVKLTITEERDQKRRQKQDA 262


>gi|307178149|gb|EFN66957.1| 40S ribosomal protein S4 [Camponotus floridanus]
          Length = 261

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/236 (63%), Positives = 183/236 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+R D  YPA
Sbjct: 24  GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRIDPNYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLCKV+ VQ G KGIP++ T+DG
Sbjct: 84  GFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI LD+   KI D I+FD GN+ M+TGGRN GRVG + +RE+H GS
Sbjct: 144 RTIRYPDPVIKVNDTIHLDIASGKILDSIRFDSGNLCMITGGRNLGRVGTVVSRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+  HI+D  GH FATRL NVF IGKG+K +VSLP+ +G+KLSI EE  KR AA+ 
Sbjct: 204 FDICHIKDTQGHTFATRLNNVFIIGKGTKAYVSLPRDRGVKLSIAEERDKRLAAKG 259


>gi|226507767|ref|NP_001147360.1| 40S ribosomal protein S4 [Zea mays]
 gi|195610502|gb|ACG27081.1| 40S ribosomal protein S4 [Zea mays]
          Length = 261

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/238 (62%), Positives = 185/238 (77%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+C+PLI+ +RNRLKYAL  RE+ AI+MQR + VDGKVRTD TYPA
Sbjct: 24  GSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNGREMKAIVMQRLIKVDGKVRTDPTYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E+FRL+YDTKGRF +H +  EEA++KL KV+ VQ G+ GIP++ T+D 
Sbjct: 84  GFMDVITIEKTGEHFRLVYDTKGRFTVHRITGEEAEYKLGKVKRVQLGKGGIPFLVTHDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+PDP IK NDT+K+DL   KI DFI+FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 144 RTIRFPDPAIKVNDTVKIDLTTGKIQDFIRFDTGVIAMATGGRNMGRVGVITHRERHDGG 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 204 FNIVHIKDAIDNEFATRESNVFVIGQ-EKPWISLPKGKGVKLSIAEERDRRRAHALAG 260


>gi|108861826|gb|ABG21815.1| 40S ribosomal protein S4-like protein [Schistosoma mansoni]
          Length = 264

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/235 (62%), Positives = 182/235 (77%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL + LRNRLKYALTY E   IL QR V VDG+VRTDK YPAGFM
Sbjct: 29  APRPSTGPHKLRECLPLCIFLRNRLKYALTYTECTKILAQRLVKVDGRVRTDKKYPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +  +  +EAK+KLCKV+ V  G  G+PYI T+D RTI
Sbjct: 89  DVITIEKTNEHFRLIYDTKGRFAIQRIHPDEAKYKLCKVKKVLVGHGGVPYIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDTI++D+   K+ + IKF+ GN+ MVTGGRN GRVG I   E+H GS E 
Sbjct: 149 RYPDPNIKPNDTIQVDIATGKVLNHIKFEPGNMCMVTGGRNLGRVGTITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++D+ GH+F TRL N+F IGK ++PW+SLPK +GI+LSIIEE  KR  A+  A
Sbjct: 209 VHVRDSTGHQFVTRLNNIFIIGKSNQPWISLPKNRGIRLSIIEERDKRIRARRLA 263


>gi|312371216|gb|EFR19456.1| hypothetical protein AND_22381 [Anopheles darlingi]
          Length = 262

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 146/237 (61%), Positives = 184/237 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRH+ +DG+VRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGRVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P++ T+DG
Sbjct: 85  GFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFLLTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I  ND+I+ D+   K+ + +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITGGRNLGRCGTVMQREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +H++DA GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE  +R A +AA
Sbjct: 205 FEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVKLSISEERDRRLANKAA 261


>gi|149287204|gb|ABR23501.1| ribosomal protein S4 [Ornithodoros parkeri]
          Length = 262

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/236 (62%), Positives = 185/236 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI++LRNRLKYALT  EV  I+ QR + VD KVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDHKVRTDTNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRLLYD KGRF LH +  EEAK+KLC+V+ VQ G KG+P++ T+D 
Sbjct: 85  GFMDVITIEKTGEFFRLLYDVKGRFVLHRITPEEAKYKLCRVKRVQVGPKGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K+D    KI D+IKFD GN+ MVTGG N GRVG I +RE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVKVDQATGKIDDYIKFDSGNVCMVTGGHNLGRVGTIMSRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+ GH FATRL  +F IGKG+KP++SLP+GKG+KLS+ EE  +R   +A
Sbjct: 205 FDIVHVKDSQGHTFATRLSYIFIIGKGTKPYISLPRGKGVKLSVAEERDRRLQIKA 260


>gi|444516549|gb|ELV11206.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 258

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/235 (63%), Positives = 185/235 (78%), Gaps = 1/235 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECL LI+ LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLSLIIFLRNRLKYALTGDEVKKICMQWFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G++ IP++  +D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRVTPEEAKYKLCKVRKISVGKE-IPHLVPHDV 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TIRYPDPLIK NDTI++ L+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 144 LTIRYPDPLIKVNDTIQIYLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP GKGI+L+I EE    Q  +
Sbjct: 204 FDVVHMKDANGNSFATRLSNIFVIGKGNKPWISLPWGKGIRLTIAEERDTEQWVK 258


>gi|28630193|gb|AAN77885.1| ribosomal protein S4 [Branchiostoma lanceolatum]
          Length = 238

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 146/224 (65%), Positives = 176/224 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL L LRNRLKYALTY EV  ILMQR + VDGKVRTD+ YP+
Sbjct: 15  GKFAPRPSCGPHKLRECLPLCLFLRNRLKYALTYDEVKRILMQRLIKVDGKVRTDRCYPS 74

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD ++I KT ENFRL+ D KGRF +H +  EEAK+KLCKVR V  G KGIP + T+D 
Sbjct: 75  GFMDAITIEKTAENFRLICDVKGRFTVHRITPEEAKYKLCKVRKVMTGPKGIPCLVTHDA 134

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ ND++++D+   KITD IKFD GN+ MVTGGRN GRVG++ NRE+H GS
Sbjct: 135 RTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTGGRNLGRVGLVTNRERHPGS 194

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
            + +H++D  GH FATRL N+F IG+G+KPWVSL KGKGI L+I
Sbjct: 195 LDIVHVKDTAGHTFATRLSNIFVIGRGNKPWVSLLKGKGIHLTI 238


>gi|238505502|ref|XP_002383974.1| 40S ribosomal protein S4 [Aspergillus flavus NRRL3357]
 gi|317151420|ref|XP_001824650.2| 40S ribosomal protein S4 [Aspergillus oryzae RIB40]
 gi|220690088|gb|EED46438.1| 40S ribosomal protein S4, putative [Aspergillus flavus NRRL3357]
 gi|391863079|gb|EIT72393.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
          Length = 261

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 144/224 (64%), Positives = 180/224 (80%), Gaps = 1/224 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  REV AI+MQR + VDGKVRTD T+PA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLIQVDGKVRTDPTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+D+   KITDF +FD G ++MVTGGRN GRVG++ +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKVDVATGKITDFARFDTGVVIMVTGGRNMGRVGVVTHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F  +H++DA+ + FATR  NVF IG+  KPW+SLPKGKG+KLSI
Sbjct: 205 FNIVHVKDAVDNTFATRESNVFVIGQ-DKPWISLPKGKGVKLSI 247


>gi|398388631|ref|XP_003847777.1| 40S ribosomal protein S4 [Zymoseptoria tritici IPO323]
 gi|339467650|gb|EGP82753.1| hypothetical protein MYCGRDRAFT_106489 [Zymoseptoria tritici
           IPO323]
          Length = 262

 Score =  313 bits (803), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/238 (63%), Positives = 183/238 (76%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+C+PLI+ +RNRLKYAL  RE  AI+MQR + VDGKVRTD TYPA
Sbjct: 25  GSYAPKASPGPHKLRDCMPLIVFIRNRLKYALNSRETKAIVMQRLIKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H +  EEA++KL KV  VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTGENFRLVYDTKGRFTVHRITGEEAEYKLGKVNRVQLGKGGIPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+++   KI DFI FD G I M TGGRN GRVG+I +RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKINIATGKIEDFIHFDTGVIAMATGGRNMGRVGVITHRERHDGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F  +HI+DA+ +EFATR  NVF IG+  KPW+SLPKGKG+KL+I EE R R+ AQA A
Sbjct: 205 FNIVHIKDAIDNEFATRESNVFVIGR-EKPWISLPKGKGVKLTIAEE-RDRRRAQALA 260


>gi|167526949|ref|XP_001747807.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773556|gb|EDQ87194.1| predicted protein [Monosiga brevicollis MX1]
          Length = 264

 Score =  313 bits (802), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 143/240 (59%), Positives = 185/240 (77%), Gaps = 2/240 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RECLPL++ LRNRLKYALTY EV  IL QR V VDGK RTD T+P 
Sbjct: 25  GRYAPRPSTGPHKLRECLPLVIFLRNRLKYALTYHEVKMILKQRKVYVDGKARTDLTFPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SIP TNE+FRLL+DTKGR+ +H ++D+EA FKLCKV+    G   +PY+ T+DG
Sbjct: 85  GLMDVISIPDTNEHFRLLFDTKGRYTVHKIQDDEASFKLCKVKQAAIGPNAVPYVVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K+DL+  +ITDFIKFD+G +V+ TGGRN GRVG + +R+K  G+
Sbjct: 145 RTIRYPDPHIKVNDTVKVDLDSGRITDFIKFDIGVLVLCTGGRNMGRVGTLMSRDKMMGA 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR--QAAQAAA 284
            + +H++D+ G +F T L NVF +G G KP +SLP+GKG++L+I EE  +R    A+AAA
Sbjct: 205 TDVVHVRDSAGQQFTTLLSNVFAVGSGKKPAISLPRGKGVRLTIAEERDRRLKDKAKAAA 264


>gi|66823117|ref|XP_644913.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
 gi|6226700|sp|P51405.3|RS4_DICDI RecName: Full=40S ribosomal protein S4
 gi|3647233|gb|AAD04813.1| 40S ribosomal protein S4 [Dictyostelium discoideum]
 gi|60473102|gb|EAL71050.1| 40S ribosomal protein S4 [Dictyostelium discoideum AX4]
          Length = 267

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/234 (64%), Positives = 180/234 (76%), Gaps = 3/234 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PSSGPHK RECLPLILVLRNRLKYALT +EV  ILMQR V VDGKVRTD  YPA
Sbjct: 25  GKWAPRPSSGPHKLRECLPLILVLRNRLKYALTKKEVTLILMQRLVKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRLL+D KGRF L  +  EEAKFKL +V  V+ G +GIPY++T DG
Sbjct: 85  GFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPYVHTDDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I  +DTIK+D+E  KIT FI F+V N+ M+ GG N GRVG + +REKH GS
Sbjct: 145 RTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+ +H+ D  GH+FATRL NVF IGK S+ +VSLP GKG++ S ++E   R AA
Sbjct: 205 FDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE---RNAA 255


>gi|430812711|emb|CCJ29887.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 259

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/253 (60%), Positives = 183/253 (72%), Gaps = 16/253 (6%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK R+CLPLI+ LRNRLKYAL  RE IAILMQR V VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSPGPHKLRDCLPLIIFLRNRLKYALNNRETIAILMQRLVKVDGKVRTDHTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI +T ENFRL+YDTKGR+ +H +   EA +KLCK++ VQ G K IPY  T+DG
Sbjct: 67  GFMDVISIERTGENFRLVYDTKGRYMIHRITSMEATYKLCKIKKVQLGPKAIPYAVTHDG 126

Query: 167 RTI----------------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 210
           RTI                RYP+P I ANDT+K DL  NKI   I F+VG + MVTGGR+
Sbjct: 127 RTIVCIDQMLLIFLISFLQRYPNPDIHANDTVKFDLVSNKIDGHIPFEVGKLAMVTGGRS 186

Query: 211 RGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           +GRVG+I +RE H G F+ +HI+D+L H FATRL NVF IG  S PW+SLPKGKG+KL+I
Sbjct: 187 KGRVGLIIDREHHNGGFDIVHIKDSLDHTFATRLSNVFVIGDISGPWISLPKGKGLKLTI 246

Query: 271 IEEARKRQAAQAA 283
            EE  +R+  Q A
Sbjct: 247 SEERDRRRNLQNA 259


>gi|208657539|gb|ACI30066.1| ribosomal protein S4 [Anopheles darlingi]
          Length = 262

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/237 (61%), Positives = 183/237 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQ H+ +DG+VRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQHHIKIDGRVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P++ T+DG
Sbjct: 85  GFMDVINIEKTGENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFLLTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I  ND+I+ D+   K+ + +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPAIHQNDSIQYDIATGKVMEVLKFEPGNLCMITGGRNLGRCGTVMQREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +H++DA GH FATRL NVF IGKG+K ++SLPKGKG+KLSI EE  +R A +AA
Sbjct: 205 FEIVHVKDATGHTFATRLSNVFIIGKGTKAFISLPKGKGVKLSISEERDRRLANKAA 261


>gi|198415701|ref|XP_002127921.1| PREDICTED: similar to ribosomal protein S4, X-linked X [Ciona
           intestinalis]
          Length = 259

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 146/235 (62%), Positives = 181/235 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL + LRNRL YALTY E   ILMQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLCIFLRNRLHYALTYDETKRILMQRLVKVDGKVRTDTTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  +EAK+KLCKV+ V    KG+PY+ T+D 
Sbjct: 85  GFMDVITIDKTAEYFRLIYDVKGRFAVHRITSDEAKYKLCKVKKVATAPKGVPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP+P IK +DT+ +D+   KIT F+  D GN+ M+TGG N GRVG + +RE+H GS
Sbjct: 145 RTIRYPNPDIKVHDTVVVDIASGKITGFVHLDSGNMCMITGGHNLGRVGTVMHRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ IH++DALGH FATRL NVF IG+ +KP VSLP+GKGIKL+I EE  +R A +
Sbjct: 205 FDIIHVKDALGHTFATRLSNVFIIGQANKPMVSLPRGKGIKLTIAEERDRRLATK 259


>gi|2463335|emb|CAA75242.1| ribosomal protein S4 [Oryza sativa Japonica Group]
          Length = 268

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 159/235 (67%), Positives = 184/235 (78%), Gaps = 15/235 (6%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RNRLKYALTYREVI+ILMQRHVLVDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKT EN+RLLYDTKGRFRL S++DE+AKFKLCKVRSVQFGQKGIPY+NTY  
Sbjct: 85  GFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYVV 144

Query: 167 RTIRY-------PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
            T  Y       P    + N     D +E      ++   G ++ +  G  R    +  +
Sbjct: 145 PTDTYMATIATRPTSGKRHNQDRSGDQQE------LRLHQGLMLAMCHGDWRRNTAVWCD 198

Query: 220 REK--HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           +++   KGSFETIH++DALGH+FATRLGNVFTIGKG+KPWVSLPKGKGIKLSIIE
Sbjct: 199 QQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253


>gi|145286314|gb|ABP52061.1| ribosomal protein s4a [Ancylostoma caninum]
          Length = 261

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 147/237 (62%), Positives = 181/237 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P SGPHK RECLPL L LRNRLKYAL Y EV  IL QR + VDGK+RTD  +PA
Sbjct: 25  GVFAVRPRSGPHKLRECLPLNLFLRNRLKYALNYAEVKKILRQRVIKVDGKIRTDHKFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI +TNE FRLLYD KGR+ +H +   E +FKLCKV+++   ++ IPYI T DG
Sbjct: 85  GFMDVISIERTNETFRLLYDVKGRYTVHRITAAEGQFKLCKVKALHVAKQNIPYITTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+ +DL  NKITD++KF+ GN+ M+TGGRN GRVG+I +REK  G+
Sbjct: 145 RTIRYPDPHIKVNDTVVIDLSSNKITDYVKFEAGNLAMITGGRNVGRVGVIGHREKLPGA 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ IH++DA GH FATR+ NVF IGKG+K  VSLP  KGI+L+I EE  KR A + A
Sbjct: 205 FDIIHVKDAAGHSFATRVSNVFVIGKGNKALVSLPAAKGIRLTIAEERDKRLAQKKA 261


>gi|354683887|gb|AER35072.1| 40S ribosomal protein S4 [Dictyostelium lacteum]
          Length = 267

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 147/227 (64%), Positives = 178/227 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PSSGPHK RECLPLIL+LRNRLKYALT +EV  ILMQRH+ VDGKVRTD  +PA
Sbjct: 25  GSFAPRPSSGPHKIRECLPLILILRNRLKYALTKKEVTLILMQRHLRVDGKVRTDPNFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV I +T E+FRLLYD KGRF L  +  EEAKFKL +V  V+ G +GIPY++T DG
Sbjct: 85  GFMDVVQIKETKEDFRLLYDPKGRFTLQRITPEEAKFKLARVTKVETGNQGIPYVHTDDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +DT+K+D+   KIT FI F+V N+ M+ GG N GRVG+I +REKH GS
Sbjct: 145 RTIRYPDPSIKIHDTVKIDIASGKITSFIPFEVNNLCMIVGGHNLGRVGVITSREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F+ +HI D++GH+FATRL NVF IGK +   VSLP GKG++ S I+E
Sbjct: 205 FDIVHITDSVGHQFATRLSNVFVIGKANHTLVSLPAGKGVRRSRIDE 251


>gi|426257601|ref|XP_004022414.1| PREDICTED: 40S ribosomal protein S4-like [Ovis aries]
          Length = 266

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 147/241 (60%), Positives = 186/241 (77%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKV TD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVHTDITYPA 84

Query: 107 GFMDVVSIPKTNENFR---LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT 163
           GFMDV+SI KT ENF+   L+YDTK  F ++ +  EEAK+KLCKVR +  G KGIP++ T
Sbjct: 85  GFMDVISIDKTGENFQNFCLIYDTKDHFAVYCITPEEAKYKLCKVRKIFVGTKGIPHLVT 144

Query: 164 YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +D  TI YPDPLIK NDTI++DLE  KITDFIKF  GN+ +VTGG + GR+G+I N+E+H
Sbjct: 145 HDAHTIHYPDPLIKVNDTIQIDLETGKITDFIKFGTGNLCIVTGGAHLGRIGVITNQERH 204

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
             SF+ +H++D  G+ FATRL ++F IGKG+KPW+SLP GKGI L+I EE  KR AA+ +
Sbjct: 205 PDSFDLVHVKDVNGNSFATRLSSIFVIGKGNKPWISLPHGKGIHLTIAEERDKRLAAKQS 264

Query: 284 A 284
           +
Sbjct: 265 S 265


>gi|221482770|gb|EEE21101.1| 40S ribosomal protein S4, putative [Toxoplasma gondii GT1]
 gi|221503435|gb|EEE29133.1| 40S ribosomal protein S4, putative [Toxoplasma gondii VEG]
          Length = 312

 Score =  309 bits (791), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 143/226 (63%), Positives = 181/226 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRTD+ YPA
Sbjct: 74  GHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRTDQCYPA 133

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFR+L+DTKGRF  H +R+EEA +KLC+V+ V  G KG+P + T+DG
Sbjct: 134 GFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPALITHDG 193

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYP P IKA+D I+LDL   KI D +KF+ GN+ MVTGG N GRVG+I +RE+H G 
Sbjct: 194 RTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHRERHLGG 253

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           F+ IH++DA  +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 254 FDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 299


>gi|412985609|emb|CCO19055.1| 40S ribosomal protein S4 [Bathycoccus prasinos]
          Length = 276

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/251 (57%), Positives = 179/251 (71%)

Query: 28  LSFLFSTSQLLLLTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL 87
           L    S   + +   Y ++          PHKSRECLPL L+LRNRLKYAL Y+EV  IL
Sbjct: 24  LKAFHSHGGVFIANEYRAIDRLYRSEEGCPHKSRECLPLCLILRNRLKYALNYKEVTTIL 83

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
            QR V VDGK+R +K YP G MDVV I KT+E+FRL+YD KGRF +H +   EA++KLCK
Sbjct: 84  QQRLVKVDGKIRMEKCYPCGIMDVVDIEKTDEHFRLMYDQKGRFVVHRITGIEAQYKLCK 143

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V   + G KG+P +  +D RTIRYPDP+IK  D++ +D+  NKITDF+KFD G + MVTG
Sbjct: 144 VIKKKLGDKGVPCVQLHDSRTIRYPDPMIKEGDSVMVDIASNKITDFVKFDAGALCMVTG 203

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRN GRVGI+  REKHKGSFE +H+ DA G  FATR  NVF IG G+KP VSLPKGKGIK
Sbjct: 204 GRNAGRVGIVNRREKHKGSFEVVHLTDAAGQNFATRFSNVFAIGTGNKPMVSLPKGKGIK 263

Query: 268 LSIIEEARKRQ 278
           L+I+EE RK++
Sbjct: 264 LTILEEQRKQE 274


>gi|330789883|ref|XP_003283028.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
 gi|325087100|gb|EGC40481.1| hypothetical protein DICPUDRAFT_73982 [Dictyostelium purpureum]
          Length = 267

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/234 (64%), Positives = 180/234 (76%), Gaps = 3/234 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+P+SGPHK RE LPLIL LRNRLKYALT +EV  ILMQR V VDGKVRTD  YPA
Sbjct: 25  GKWAPRPTSGPHKLRESLPLILCLRNRLKYALTKKEVTLILMQRLVKVDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRLLYD KGRF L  +  EEAKFKL +V  V+ G +GIPY++T DG
Sbjct: 85  GFMDVITIDKTKENFRLLYDPKGRFTLQRITPEEAKFKLARVVKVESGNQGIPYVHTDDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +DT+K+D+E  KIT FI FD+ N+ M+ GG N GRVG I NRE+H GS
Sbjct: 145 RTIRYPDPAIKIHDTVKIDIESGKITAFIPFDINNLCMIVGGHNLGRVGAINNRERHAGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+ +HI D+ G++FATRL NVF IGK S+ +VSLP GKG++ S I+E   R AA
Sbjct: 205 FDIVHITDSAGNQFATRLSNVFVIGKSSQTFVSLPAGKGVRRSRIDE---RNAA 255


>gi|359496057|ref|XP_003635141.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
           [Vitis vinifera]
          Length = 205

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/180 (82%), Positives = 161/180 (89%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS  P KS E LPLIL+L NRLKYALTYREVIAILMQ+HV VDGKVR DKTYP+
Sbjct: 25  GAFAPKPSYRPQKSWERLPLILILWNRLKYALTYREVIAILMQQHVFVDGKVRIDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPK N+NFRLLYDTKGRF LH +R+EEAKFKL KV SVQ GQKGIPY+NTYD 
Sbjct: 85  GFMDVVSIPKKNKNFRLLYDTKGRFXLHLVRNEEAKFKLWKVXSVQLGQKGIPYLNTYDE 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP+PLIKANDT KLDL+ NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKG+
Sbjct: 145 RTIRYPNPLIKANDTTKLDLKSNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGN 204


>gi|392495106|gb|AFM74216.1| 40S ribosomal protein S4-like protein [Spirometra erinaceieuropaei]
          Length = 264

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/232 (62%), Positives = 179/232 (77%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RECLPL + LRNRLKYALTY E   IL QR V VDG+VRTD+ +PAGFM
Sbjct: 29  APRPSTGPHKLRECLPLAIFLRNRLKYALTYDECTKILKQRLVKVDGRVRTDRKFPAGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI +TNE+FRL+YDTK RF +H +  EEAK+KLCK+R V  G   +PYI T+D RTI
Sbjct: 89  DVISIDRTNEHFRLIYDTKKRFAIHRIHPEEAKYKLCKIRKVLTGPGNVPYIVTHDARTI 148

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK NDT+++D    K+ +FIKF+ GN+ MVTGG N GRVG+I   E+H GS E 
Sbjct: 149 RYPDPEIKVNDTVQIDRATGKVLNFIKFEPGNVCMVTGGHNLGRVGVITQWERHPGSVEM 208

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H++D  GH+F TRL N+F IGK +K WVSLPKGKGI+LSI+EE  +R  A+
Sbjct: 209 VHVRDNTGHQFVTRLNNIFIIGKSNKAWVSLPKGKGIRLSILEERDRRLRAK 260


>gi|443916876|gb|ELU37810.1| 40s ribosomal protein s4 [Rhizoctonia solani AG-1 IA]
          Length = 331

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/223 (63%), Positives = 173/223 (77%)

Query: 48  LQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 107
           L AP+PS GPHK RE LPL + LRNRLKYALT REV  I+ QR + VDGKVRTD TYP G
Sbjct: 94  LCAPRPSPGPHKLRESLPLTIFLRNRLKYALTGREVTTIVAQRLIKVDGKVRTDNTYPTG 153

Query: 108 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 167
           +MDV+SI K+ E+FRLLYD KGRF +H +  EEA +KL KVR    G +G+PYI T+DGR
Sbjct: 154 YMDVISIEKSGEHFRLLYDVKGRFVIHRITPEEATYKLLKVRKTAVGARGVPYIVTHDGR 213

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
           TIRYPDP IK NDT+K D+   KIT+F+KFD GN+VM+TGGRN GRVG I +RE+H G F
Sbjct: 214 TIRYPDPQIKVNDTVKFDITTGKITEFVKFDTGNLVMITGGRNMGRVGTITHRERHVGGF 273

Query: 228 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           + +H++D L   FATR+ N+F IG+GSK W+SLPKGKG KL+I
Sbjct: 274 DIVHVKDVLDRTFATRISNIFVIGEGSKAWISLPKGKGTKLTI 316


>gi|237840521|ref|XP_002369558.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
 gi|211967222|gb|EEB02418.1| hypothetical protein TGME49_007440 [Toxoplasma gondii ME49]
          Length = 301

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/226 (63%), Positives = 181/226 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRTD+ YPA
Sbjct: 63  GHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRTDQCYPA 122

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFR+L+DTKGRF  H +R+EEA +KLC+V+ V  G KG+P + T+DG
Sbjct: 123 GFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPALITHDG 182

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYP P IKA+D I+LDL   KI D +KF+ GN+ MVTGG N GRVG+I +RE+H G 
Sbjct: 183 RTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHRERHLGG 242

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           F+ IH++DA  +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 243 FDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 288


>gi|95007264|emb|CAJ20484.1| 40s ribosomal protein s4, putative [Toxoplasma gondii RH]
          Length = 263

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/226 (63%), Positives = 180/226 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE  PL+++LRNRL+YALTYREV+ I+MQR + VD KVRTD+ YPA
Sbjct: 25  GHYAPRPSPGPHKLRESAPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRTDQCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFR+L+DTKGRF  H +R+EEA +KLC+V+ V  G KG+P + T+DG
Sbjct: 85  GFMDVISIEKTKENFRMLFDTKGRFVPHPIREEEASYKLCRVKKVVVGPKGVPALITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYP P IKA+D I+LDL   KI D +KF+ GN+ MVTGG N GRVG+I +RE+H G 
Sbjct: 145 RTMRYPHPSIKAHDCIRLDLNTGKIVDTLKFEAGNMAMVTGGHNVGRVGVIVHRERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           F+ IH++DA  +EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 205 FDIIHLRDAKNNEFATRISNVFVIGKGEKAWISLPKEKGIRLSIME 250


>gi|358056143|dbj|GAA97883.1| hypothetical protein E5Q_04563 [Mixia osmundae IAM 14324]
          Length = 283

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/250 (59%), Positives = 184/250 (73%), Gaps = 18/250 (7%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ S GPHK RE +P+ + LRNRLKYALT REV  I+ QR + VDGKVRTD TYP 
Sbjct: 26  GTYAPRASPGPHKLREAMPMSVFLRNRLKYALTGREVTLIVAQRLIKVDGKVRTDPTYPT 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI K+ E+FR+LYD KGRF +H +  EEA++KLCKV+ VQ G KG+PY+ T+DG
Sbjct: 86  GFMDVVSIEKSGEHFRILYDVKGRFAIHRITAEEAQYKLCKVKKVQLGAKGVPYLVTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEE------------------NKITDFIKFDVGNIVMVTGG 208
           RTIRYPDP IK ND+IKL L +                  +KI   IKF+VGN+VM TGG
Sbjct: 146 RTIRYPDPAIKVNDSIKLVLPDTINPAATHSGAASAVATVHKIDGHIKFEVGNLVMCTGG 205

Query: 209 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 268
           RN GR G+I +RE+H G F+ +H++D++ H F+TRLGNVF +G+GSK WVSLPKGKGIKL
Sbjct: 206 RNMGRAGVIVHRERHMGGFDIVHVRDSMDHTFSTRLGNVFLVGEGSKAWVSLPKGKGIKL 265

Query: 269 SIIEEARKRQ 278
           SI EE  +R+
Sbjct: 266 SIAEERDQRR 275


>gi|343429529|emb|CBQ73102.1| probable ribosomal protein S4.e, cytosolic [Sporisorium reilianum
           SRZ2]
          Length = 264

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/237 (59%), Positives = 180/237 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI  QR + +DGKVRTD TYP 
Sbjct: 25  GTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRTDPTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DVVSI K+ E+FR+LYD KGRF +H +  EEA +KL KV+ VQ G +G+P+I T+DG
Sbjct: 85  GFQDVVSIDKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPHIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT++ D+E  KI DF+ FD G  VMVTGGRN+GR G+I  RE+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVRFDIESQKILDFVAFDTGATVMVTGGRNQGRAGVITGRERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D LG +F+TRL NVF IG   KP +S+P+G G+KL+I EE  +R+  + A
Sbjct: 205 FDIVHIRDVLGRDFSTRLSNVFVIGADGKPMISMPRGGGVKLTITEERDQRRRQKEA 261


>gi|326432455|gb|EGD78025.1| ribosomal protein s4 X isoform [Salpingoeca sp. ATCC 50818]
          Length = 263

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 144/236 (61%), Positives = 183/236 (77%), Gaps = 1/236 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RECLPL++ +RNRLKYALTY EV  I  +R++ VDGKVRTD TYPA
Sbjct: 25  GRFAPRPSTGPHKLRECLPLVIFIRNRLKYALTYHEVKMITKERNIKVDGKVRTDMTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIPKTNENFRLLYD KGR+ +H + D EAK+KLCKV     G +G+P + T+D 
Sbjct: 85  GFMDVISIPKTNENFRLLYDAKGRYTVHRIDDAEAKYKLCKVTKTFVGPRGVPMVVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK +D++K+DLE  +IT+F+KFD   + M+TGGRN GRVG I +R++H G 
Sbjct: 145 RTIRYPDPHIKVHDSVKVDLETGRITEFVKFDNNMLAMITGGRNMGRVGTIVHRDRHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ + ++DA GH+FATRL N+F IG   KP VSLPKGKG+KL+I EE  +R   +A
Sbjct: 205 FDIVTLRDANGHQFATRLSNIFVIGD-KKPLVSLPKGKGVKLTIAEERDRRMEQKA 259


>gi|58259587|ref|XP_567206.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134107185|ref|XP_777723.1| 40S ribosomal protein S4 [Cryptococcus neoformans var. neoformans
           B-3501A]
 gi|321249797|ref|XP_003191577.1| hypothetical protein CGB_A6670W [Cryptococcus gattii WM276]
 gi|50260419|gb|EAL23076.1| hypothetical protein CNBA6010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223343|gb|AAW41387.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|317458044|gb|ADV19790.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
 gi|405117993|gb|AFR92768.1| 40s ribosomal protein [Cryptococcus neoformans var. grubii H99]
          Length = 263

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/224 (65%), Positives = 176/224 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL + LRNRLKYALT REV AI+ QR + VDGKVRTD+T+PA
Sbjct: 25  GTYAPRPSPGPHKLRESLPLTVFLRNRLKYALTGREVTAIVKQRLIKVDGKVRTDETFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI ++ E+FRLLYD KGRF +H +  EEA FKL KVR  Q G KG+P+I T+DG
Sbjct: 85  GFMDVISIERSGEHFRLLYDVKGRFTIHRITPEEATFKLLKVRKHQLGAKGVPHIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT+K D  +NKI D IKF+ GN+VMVTGGRN GR G+I ++E+H G 
Sbjct: 145 RTIRYPDPAIKVNDTVKFDFVQNKIVDHIKFEPGNVVMVTGGRNMGRSGVIVHKERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           F+ +H++D L   FATRL N+F IG+GSK  VSLPKGKG+KLSI
Sbjct: 205 FDIVHVKDVLDRTFATRLSNIFVIGEGSKAQVSLPKGKGVKLSI 248


>gi|388853330|emb|CCF52950.1| probable ribosomal protein S4.e, cytosolic [Ustilago hordei]
          Length = 246

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 140/237 (59%), Positives = 180/237 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI  QR + +DGKVRTD TYP 
Sbjct: 7   GTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRTDPTYPT 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DVVSI K+ E+FR+LYD KGRF +H +  EEA +KL KV+ VQ G +G+P+I T+DG
Sbjct: 67  GFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPHIVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT++ D++  KI DF+ FD G  VMVTGGRN+GR G+I  +E+H G 
Sbjct: 127 RTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGRAGVIVGKERHLGG 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D LG +F+TRLGNVF IG   KP +S+P+G G+ L+I EE  +R+  + A
Sbjct: 187 FDIVHIRDVLGRDFSTRLGNVFVIGSEGKPMISMPRGGGVALTITEERDQRRRQKEA 243


>gi|296470835|tpg|DAA12950.1| TPA: ribosomal protein S4, X-linked-like [Bos taurus]
          Length = 223

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/222 (64%), Positives = 175/222 (78%)

Query: 63  CLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFR 122
           CLPLI  LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPAGFMDV+ I KT ENFR
Sbjct: 1   CLPLITFLRNRLKYALTGDEVKKIGMQHFIKIDGKVRTDITYPAGFMDVIGIDKTGENFR 60

Query: 123 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 182
           L+YDTKGRF +H +  +EAK+KLCKVR +  G KGIP++ T+D R IRYPDPLIK NDTI
Sbjct: 61  LIYDTKGRFAVHRITPQEAKYKLCKVRKIFVGTKGIPHLVTHDARAIRYPDPLIKVNDTI 120

Query: 183 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 242
           + DLE  KITDFIKFD GN+  VTGG N GR+G+I NRE+H GSF+ +H++DA G+ FAT
Sbjct: 121 QTDLETGKITDFIKFDTGNLCKVTGGANLGRIGVISNRERHPGSFDVVHVKDANGNSFAT 180

Query: 243 RLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 181 WLSNIFIIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 222


>gi|71015994|ref|XP_758861.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
 gi|46098379|gb|EAK83612.1| hypothetical protein UM02714.1 [Ustilago maydis 521]
          Length = 386

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 140/237 (59%), Positives = 180/237 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL+++LRNRLKYALT REV AI  QR + +DGKVRTD TYP 
Sbjct: 147 GTYAPRPSNGPHKLREALPLVILLRNRLKYALTGREVNAITAQRLIKIDGKVRTDPTYPT 206

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DVVSI K+ E+FR+LYD KGRF +H +  EEA +KL KV+ VQ G +G+P+I T+DG
Sbjct: 207 GFQDVVSIEKSGEHFRILYDVKGRFIVHRITAEEATYKLLKVKKVQLGARGVPHIVTHDG 266

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP IK NDT++ D++  KI DF+ FD G  VMVTGGRN+GR G+I  +E+H G 
Sbjct: 267 RTIRYPDPAIKVNDTVRFDIDSQKILDFVAFDTGATVMVTGGRNQGRAGVITGKERHLGG 326

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ +HI+D LG +F+TRL NVF IG   KP +S+P+G G+KL+I EE  +R+  + A
Sbjct: 327 FDIVHIRDVLGRDFSTRLSNVFVIGTDGKPMISMPRGGGVKLTITEERDQRRRQKEA 383


>gi|444729526|gb|ELW69939.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 248

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 145/232 (62%), Positives = 181/232 (78%), Gaps = 5/232 (2%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           P +GP ++         + NRLKYALT  EV  I MQR + +DGKVRTD TYPAGFMDV+
Sbjct: 21  PWAGPTRAERGR-----VGNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI 75

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTIRYP
Sbjct: 76  SIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYP 135

Query: 173 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DPLIK NDTI++DLE  KI+DFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 136 DPLIKVNDTIQIDLETGKISDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 195

Query: 233 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 196 KDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 247


>gi|158286707|ref|XP_308886.4| AGAP006871-PA [Anopheles gambiae str. PEST]
 gi|157020596|gb|EAA04244.5| AGAP006871-PA [Anopheles gambiae str. PEST]
          Length = 262

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/237 (60%), Positives = 181/237 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRHV +DGKVRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRHVKIDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P++ T+DG
Sbjct: 85  GFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLKVKRVQIGPKRVPFLLTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I  +D+I+ D+   K+ D +KF+ GN+ M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPQIHQHDSIQYDIATGKVLDVLKFEPGNLCMITGGRNLGRCGTVILREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +H++D  GH FATRL NVF IGK +K ++SLPKGKG+KL+I EE  +R A +AA
Sbjct: 205 FEIVHVKDTTGHVFATRLSNVFIIGKSTKAYISLPKGKGVKLTIAEERDRRLANKAA 261


>gi|324523515|gb|ADY48258.1| 40S ribosomal protein S4 [Ascaris suum]
          Length = 263

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 145/239 (60%), Positives = 180/239 (75%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P+SGPHK RE LPLIL LRNRLKYAL+Y E   I  QR + +DGKVRT+  +PA
Sbjct: 25  GVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNEARMICKQRLIKIDGKVRTEMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRLLYD KGR+ +H + + E +FKLCKV     G KG+P+I T+D 
Sbjct: 85  GFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKVVKKSVGPKGVPFIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI LD+   K  D++KFD GN+ MVTGGRN GRVG++ +REKH GS
Sbjct: 145 RTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGGRNMGRVGVVGHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG-KGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA GH FATRL NVF IGKG+K  VSLP   KG++L+I EE  KR A + AA
Sbjct: 205 FDIVHVKDAAGHTFATRLNNVFIIGKGTKSLVSLPGATKGVRLTIAEERDKRLAQKKAA 263


>gi|126697462|gb|ABO26688.1| ribosomal protein S4 [Haliotis discus discus]
          Length = 242

 Score =  304 bits (778), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 135/217 (62%), Positives = 176/217 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LP+ +++RNRLKYALTY EV  I+ QR + VDG+VRTDK +P 
Sbjct: 26  GVFAPRPSTGPHKLREALPMSVLMRNRLKYALTYNEVKKIVNQRLIKVDGRVRTDKNFPT 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT+ENFR+LYD KGRF +H ++ EEAK+KLC+VR V  G KG+PY+ T DG
Sbjct: 86  GFMDVVTIEKTSENFRVLYDVKGRFIVHRIKPEEAKYKLCRVRGVATGPKGVPYLTTNDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP++K NDTI +D+   K+ D++KF+ GN+  +TGG N GRVG+I NREKH GS
Sbjct: 146 RTIRYPDPVVKVNDTIMVDIATGKMKDYVKFESGNLCTITGGHNLGRVGVIINREKHPGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           F+ +H++D+LGH FATR+  VF IGKG+KPW+SLP+G
Sbjct: 206 FDIVHVKDSLGHTFATRMSYVFVIGKGNKPWISLPRG 242


>gi|119592222|gb|EAW71816.1| ribosomal protein S4, X-linked, isoform CRA_b [Homo sapiens]
          Length = 231

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 142/206 (68%), Positives = 169/206 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGK 252
           F+ +H++DA G+ FATRL N+F IGK
Sbjct: 205 FDVVHVKDANGNSFATRLSNIFVIGK 230


>gi|351700252|gb|EHB03171.1| 40S ribosomal protein S4 [Heterocephalus glaber]
          Length = 258

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 145/240 (60%), Positives = 184/240 (76%), Gaps = 5/240 (2%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G+ AP+PS+GPHK RECLPLI+ LRNRLK ALT  EV  I M R + +DGKVRT+ TY
Sbjct: 23  STGVFAPRPSTGPHKLRECLPLIIFLRNRLKSALTGDEVKKICMHRFIKIDGKVRTEITY 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           PAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEA++KLCKVR +  G KGIP++ T+
Sbjct: 83  PAGFMDVISIDKTGENFRLIYDTKGRFAIHRITPEEAQYKLCKVRKIFVGTKGIPHLVTH 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYPDPLIK NDTI++ L+  KIT     +  N+ MVTGG N G +G+I N E+H 
Sbjct: 143 DARTIRYPDPLIKVNDTIQIHLDTGKIT-----NTSNLCMVTGGANLGGIGVITNGERHP 197

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           GSF+ +H++D  G+ FAT L N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 198 GSFDVVHVKDTNGNSFATWLSNIFLIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 257


>gi|388583766|gb|EIM24067.1| 40S ribosomal protein S4, partial [Wallemia sebi CBS 633.66]
          Length = 260

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 143/238 (60%), Positives = 182/238 (76%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE LPL ++LRNRLKYAL+  EV +IL QR V +DGK RTD+TYP 
Sbjct: 23  GTYAPRPSPGPHKLRESLPLTILLRNRLKYALSSEEVTSILQQRLVKIDGKARTDRTYPT 82

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV+SI  + E+FR+LYD KGRF +H + DEEA+FKL KV+    G +G+P+I T+DG
Sbjct: 83  GFQDVISIEASGEHFRILYDVKGRFTIHRITDEEAQFKLLKVKKQAIGARGVPFIVTHDG 142

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+K DL  NKI DF+KF+ GN+VM TGGRN+GR+G I  RE+H G 
Sbjct: 143 RTIRYPDPLIKVNDTVKFDLINNKIVDFVKFETGNVVMATGGRNQGRIGTIIGRERHLGG 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR-KRQAAQAA 283
           ++ ++I+D L  +FATRL NVF +G+  K WVSLPKG G+KL+I EE   +R+ AQA+
Sbjct: 203 YDIVNIKDPLDRQFATRLTNVFVVGQ-QKSWVSLPKGGGVKLTITEERDMRRRRAQAS 259


>gi|298707012|emb|CBJ29820.1| 40S ribosomal protein S4 [Ectocarpus siliculosus]
          Length = 262

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 143/236 (60%), Positives = 184/236 (77%), Gaps = 1/236 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPH +RECLPL++++RNRLKYALT  E   I MQ+ + VDGKVRTD  +PA
Sbjct: 25  GIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV I K+ + FRLLY+TKGRF LH + +EE+KFKLC+V  V+  +  IPY+ T+DG
Sbjct: 85  GFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTIK+DLE  K  D IKF++GN+ M+  GRN GRVGI+++ E+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE-ARKRQAAQ 281
           F+ + ++D  GH FATRL N+FT+G G++  VSLPKGKG+KL+I+EE A K + AQ
Sbjct: 205 FDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPKGKGVKLTILEEKAAKIKKAQ 260


>gi|407918333|gb|EKG11604.1| Ribosomal protein S4e [Macrophomina phaseolina MS6]
          Length = 221

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 146/221 (66%), Positives = 174/221 (78%), Gaps = 1/221 (0%)

Query: 64  LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRL 123
           +PLI+ +RNRLKYAL  RE  AI+MQR V VDGKVRTD TYPAGFMDV+SI KT ENFRL
Sbjct: 1   MPLIVFIRNRLKYALNGRETKAIMMQRLVKVDGKVRTDVTYPAGFMDVISIEKTGENFRL 60

Query: 124 LYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIK 183
           +YDTKGRF +H +  EEA++KL KVR VQ G+ GIP++ T+D RTIRYPDPLIK NDT+K
Sbjct: 61  VYDTKGRFTVHRITAEEAEYKLGKVRRVQLGKGGIPFLVTHDARTIRYPDPLIKVNDTVK 120

Query: 184 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 243
           +DL   KITDFIKFD G I M TGGRN GRVG+I +RE+H G F  +HI+DA+ +EFATR
Sbjct: 121 IDLATGKITDFIKFDTGVIAMATGGRNMGRVGVITHRERHDGGFNIVHIKDAVDNEFATR 180

Query: 244 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
             NVF IG+  KPW+SLPKGKG+KLSI EE  +R+A   A 
Sbjct: 181 ESNVFIIGR-EKPWISLPKGKGVKLSIAEERDRRRAYALAG 220


>gi|345324726|ref|XP_001510806.2| PREDICTED: 40S ribosomal protein S4-like, partial [Ornithorhynchus
           anatinus]
          Length = 279

 Score =  300 bits (769), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 139/206 (67%), Positives = 169/206 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 74  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 133

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T++ 
Sbjct: 134 GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHEA 193

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 194 RTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 253

Query: 227 FETIHIQDALGHEFATRLGNVFTIGK 252
           F+ +H++DA G+ FATRL N+F IGK
Sbjct: 254 FDVVHVKDANGNSFATRLSNIFVIGK 279


>gi|312077176|ref|XP_003141188.1| 40S ribosomal protein S4 [Loa loa]
 gi|307763646|gb|EFO22880.1| 40S ribosomal protein S4 [Loa loa]
          Length = 263

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 145/239 (60%), Positives = 178/239 (74%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RE LPLIL LRNRLKYALTY E   I  QR + VDGKVRTD  +PA
Sbjct: 25  GVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRTDMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I +TNE FRLLYD KGR+  H + ++E  FKLCK+     G KG+P+I T+D 
Sbjct: 85  GFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKIVKKCVGPKGVPFIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI +D+   K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GS
Sbjct: 145 RTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+DA GH FATRL NVF IGKG+K  VSLP   KG++L+I EE  +R A + AA
Sbjct: 205 FDIVHIKDAAGHSFATRLNNVFIIGKGTKSMVSLPGPTKGVRLTIAEERDRRLAQKRAA 263


>gi|334184265|ref|NP_001189539.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
 gi|330251523|gb|AEC06617.1| 40S ribosomal protein S4-1 [Arabidopsis thaliana]
          Length = 184

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 140/157 (89%), Positives = 150/157 (95%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPL+L++RNRLKYALTYREVI+ILMQRH+ VDGKVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVRS+QFGQKGIPY+NTYDG
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 203
           RTIRYPDPLIK NDTIKLDLEENKI +FIKFDVG  V
Sbjct: 145 RTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181


>gi|225713724|gb|ACO12708.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
          Length = 260

 Score =  299 bits (766), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 140/236 (59%), Positives = 180/236 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   +PSSGPHK RE +PL L LRNRL+YALT +EV  I  QR V VDG+VR D  +PA
Sbjct: 25  GVFTTRPSSGPHKLRESVPLTLFLRNRLRYALTAKEVGTITKQRLVKVDGRVRMDPRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I +TNENFRL+YD KGRF +H +  +EAK+KLC+V++V+ G K +PY+ T DG
Sbjct: 85  GFMDVIQIERTNENFRLIYDVKGRFTVHRITAQEAKYKLCRVKAVKTGPKNVPYLYTSDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I+ ND+I+LD+   K  D +KFD GN+ MVTGGRN GRVG I +RE+H GS
Sbjct: 145 RTIRYPDPVIRVNDSIRLDINTGKTMDSVKFDTGNLCMVTGGRNTGRVGAIMHRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+ GH FATRL   F IGK +KP++SLPKG GIKL+I EE  KR + +A
Sbjct: 205 FDIVHVKDSNGHTFATRLDYTFVIGKDNKPYISLPKGGGIKLTIAEERDKRLSQKA 260


>gi|358340045|dbj|GAA33707.2| small subunit ribosomal protein S4e [Clonorchis sinensis]
          Length = 285

 Score =  299 bits (766), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 144/235 (61%), Positives = 174/235 (74%), Gaps = 12/235 (5%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           APKPS+GPHK RECLPL + LRNRLK AL Y E   IL Q+ + VDGKVRTDK YPAGFM
Sbjct: 38  APKPSTGPHKLRECLPLSIFLRNRLKVALNYNECTKILAQKLIKVDGKVRTDKKYPAGFM 97

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I KTNE+FRL+YDTKGRF +H +  EEAK+KLCKVR V     G+PY+ T+D RTI
Sbjct: 98  DVITIEKTNEHFRLVYDTKGRFAIHRIHPEEAKYKLCKVRKVLTASGGVPYLVTHDARTI 157

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKF------------DVGNIVMVTGGRNRGRVGII 217
           RYPDP IK NDTI++D+   K+ + IKF            D GNI M+TGGRN GRVG I
Sbjct: 158 RYPDPNIKPNDTIQVDIATGKVLNHIKFDPGLFLFIIFYYDQGNICMITGGRNLGRVGTI 217

Query: 218 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
              E+H GS E +H++D+ GH+F TRL NVF IGK +K W+SLPKGKG++LSIIE
Sbjct: 218 TQWERHPGSVEMVHVRDSTGHQFLTRLNNVFIIGKSNKAWISLPKGKGVRLSIIE 272


>gi|432097049|gb|ELK27547.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 287

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 144/235 (61%), Positives = 175/235 (74%), Gaps = 22/235 (9%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR                
Sbjct: 71  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR---------------- 114

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
            F+D     KT ENFRL+YDTKGRF +H +R EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 115 -FID-----KTGENFRLVYDTKGRFAVHRIRPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 168

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTI YPDPLIK NDTI++DLE  KITDFIKFD GN+ M+TGG N GR+G+I NREKH GS
Sbjct: 169 RTICYPDPLIKVNDTIQIDLESGKITDFIKFDTGNLCMITGGANLGRIGVITNREKHPGS 228

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ +H++D  G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+
Sbjct: 229 FDVVHVKDTTGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 283


>gi|357017173|gb|AET50615.1| hypothetical protein [Eimeria tenella]
          Length = 262

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 142/227 (62%), Positives = 176/227 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RECLPL ++LRNRLKYALTY+E   I+MQR V VDGKVRTD+ YPA
Sbjct: 25  GHYAPRPSPGPHKLRECLPLAILLRNRLKYALTYQETKLIVMQRLVKVDGKVRTDQCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVS+ KT ++FRLL DTKGRF    +  EEA +KLC+V+ V  G K IP + T+D 
Sbjct: 85  GFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEASYKLCRVKKVLIGPKAIPMLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P P IK +DTI+L + ++KI D  KF+VGN+ MVTGG N GRVG I NRE+H GS
Sbjct: 145 RTIRFPHPNIKVHDTIRLSIADSKIVDTYKFEVGNVAMVTGGHNVGRVGTIVNRERHLGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F+ +H++D+ G+EFATR+ NVF IGKG KP VSLPK KGI+L+I E+
Sbjct: 205 FDIVHLRDSRGNEFATRISNVFVIGKGEKPMVSLPKDKGIRLTIFED 251


>gi|313236165|emb|CBY11489.1| unnamed protein product [Oikopleura dioica]
 gi|313240142|emb|CBY32493.1| unnamed protein product [Oikopleura dioica]
          Length = 258

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/233 (58%), Positives = 178/233 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPLIL LRNRL YALT  EV  ILMQR V VDGKVRTD  +PA
Sbjct: 25  GVYAPKPSQGPHKQRECLPLILFLRNRLHYALTGAEVKKILMQRLVKVDGKVRTDVNFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+ +TNE+FRL+YD KGRF +H +  EE K+KLC++  +    KG+P++ T+D 
Sbjct: 85  GFMDVISMERTNEHFRLIYDVKGRFAVHRITPEEGKYKLCRITKIGVAAKGVPFVVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP+P IK ND++ +D+E   +T+ ++FD G++ M+TGG N GRVG+I +R++H GS
Sbjct: 145 RTIRYPNPDIKVNDSVIVDIESGAVTEHVRFDTGSLCMITGGHNLGRVGVIASRDRHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ ++I+DA G  FATRL NVF IG+G +  VSLP+ KGI++SI EE  KR A
Sbjct: 205 FDIVNIKDATGAVFATRLDNVFIIGRGKQALVSLPRQKGIRISIAEEREKRLA 257


>gi|170574388|ref|XP_001892792.1| 40S ribosomal protein S4 [Brugia malayi]
 gi|158601466|gb|EDP38372.1| 40S ribosomal protein S4, putative [Brugia malayi]
          Length = 263

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 144/239 (60%), Positives = 176/239 (73%), Gaps = 1/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RE LPLIL LRNRLKYALTY E   I  QR + VDGKVRTD  +PA
Sbjct: 25  GVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRTDMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KTNE FRLLYD KGR+  H + ++E   KLCK+     G KG+P+I T+D 
Sbjct: 85  GFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVKKCVGPKGVPFIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI +D+   K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GS
Sbjct: 145 RTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQAAQAAA 284
           F+ +HI+DA  H FATRL NVF IGKG+K  VSLP   KG++L+I EE  +R A + AA
Sbjct: 205 FDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLAQKRAA 263


>gi|399218543|emb|CCF75430.1| unnamed protein product [Babesia microti strain RI]
          Length = 261

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 142/237 (59%), Positives = 182/237 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHKSRECLPLI++LR+RLKYALTY EV  I MQ+ V VDGK+RTD  YP 
Sbjct: 24  GKYAPKPSPGPHKSRECLPLIILLRDRLKYALTYDEVKLIAMQKLVKVDGKIRTDTCYPI 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MDVV+I +TNENFRLLYDTKGRF    +  EEA++KLC+V+ V  G K IP   T+DG
Sbjct: 84  GYMDVVTIDRTNENFRLLYDTKGRFVPIKISPEEAEYKLCRVKRVVLGPKEIPLAVTHDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+  P +KA DT++LD+   K+ +F+KF++GN+ MVTGG N GRVGII +R+KH G 
Sbjct: 144 RTIRFIHPEVKAGDTLRLDISSGKVLEFLKFEIGNLAMVTGGHNVGRVGIITSRQKHDGG 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+ I+I+D++G+ F+TR+ NVF IGKG K +V+LPK KGIK +IIEE   R A + +
Sbjct: 204 FDIINIRDSIGNSFSTRVSNVFVIGKGPKSYVTLPKYKGIKHTIIEERNARLAKEKS 260


>gi|265141272|gb|ACY74439.1| 40S ribosomal protein S4-like protein [Carukia barnesi]
          Length = 227

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/224 (62%), Positives = 176/224 (78%)

Query: 61  RECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNEN 120
           RECLPLI+ LRNRLKYAL   EV  IL QR + VDGKVRTD TYPAGFMDVV+I KT +N
Sbjct: 1   RECLPLIIFLRNRLKYALNGDEVKKILKQRLIKVDGKVRTDPTYPAGFMDVVTIEKTGDN 60

Query: 121 FRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND 180
           FRLLYD KGRF  H +  EEA +KL KV+    G + +PY+ T+DGRTIRYPDPL+K ND
Sbjct: 61  FRLLYDVKGRFVCHRITPEEAVYKLGKVKRTGVGIRSVPYLVTHDGRTIRYPDPLVKVND 120

Query: 181 TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEF 240
           T+ +D+   KITDFIKFD GN VMV GGRN GR+GII +RE+H GS++ +HI+DA+G++F
Sbjct: 121 TVIIDIRTGKITDFIKFDTGNAVMVIGGRNTGRIGIITHRERHPGSYDIVHIKDAVGNQF 180

Query: 241 ATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           ATRLGN+F IG+G+K  +++P+GKGI+LSI EE  +R A ++ +
Sbjct: 181 ATRLGNIFIIGRGTKGMITVPRGKGIRLSIAEERDRRLAEKSKS 224


>gi|281206604|gb|EFA80790.1| 40S ribosomal protein S4 [Polysphondylium pallidum PN500]
          Length = 284

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 140/231 (60%), Positives = 177/231 (76%), Gaps = 3/231 (1%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS GP K +ECLPL ++LRNRLKYALT  EV  I+MQR V ++G VRTD  +P GFM
Sbjct: 45  APRPSPGPRKLKECLPLCIILRNRLKYALTRNEVTKIVMQRLVKINGVVRTDVNFPVGFM 104

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSI KTNENFRLL+DTKGRF+L  ++  EAKF L KV  V+ G +GIPY++T +G T 
Sbjct: 105 DVVSIEKTNENFRLLFDTKGRFQLQRIQPNEAKFILTKVTKVETGLQGIPYLHTDNGHTY 164

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP IK +DT+K+DLE +KI  F+ F++ N+ M+TGG N GRVG+I NRE+H GSF+ 
Sbjct: 165 RYPDPAIKIHDTVKIDLETSKIVSFVPFELNNLCMITGGHNLGRVGVITNRERHLGSFDI 224

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           +H+ D++GH FATRL NVF IGKGS  +VSL  GKG+K S+I+E   R AA
Sbjct: 225 VHVTDSVGHSFATRLSNVFIIGKGSTTFVSLLAGKGVKKSLIDE---RNAA 272


>gi|328859105|gb|EGG08215.1| hypothetical protein MELLADRAFT_42942 [Melampsora larici-populina
           98AG31]
          Length = 265

 Score =  293 bits (749), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 137/227 (60%), Positives = 173/227 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ + GPHK RE LPL ++LRNRLKYALT REV  I+ QR + VD KVRTD  +P 
Sbjct: 26  GTYAPRSNPGPHKLRESLPLSILLRNRLKYALTGREVTLIVAQRLIKVDNKVRTDPKFPT 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI K+ ENFR+LYD KGRF +H +  EEA +KLCKV+ VQ G KG+P++ T+DG
Sbjct: 86  GFMDVVSIEKSGENFRVLYDVKGRFTIHRISAEEAAYKLCKVKRVQLGAKGVPFLVTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTI+ DLE NKI D+I F+ G++VM TGGRN+GRVG I +REKH G 
Sbjct: 146 RTIRYPDPIIKVNDTIRFDLENNKIVDYIPFEAGSLVMCTGGRNQGRVGTIVHREKHIGG 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           ++ +H++D L   F+TR+GN+  IG   K  +SLP+G G+KLSI EE
Sbjct: 206 YDIVHVRDVLDRAFSTRIGNIQVIGTHGKAGISLPRGGGVKLSIAEE 252


>gi|443894390|dbj|GAC71738.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
          Length = 315

 Score =  291 bits (746), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 141/266 (53%), Positives = 179/266 (67%), Gaps = 29/266 (10%)

Query: 47  GLQAPKPSSGPHKSRECLPLI-----------------------------LVLRNRLKYA 77
           G  AP+PS+GPHK RE LPL+                             ++LRNRLKYA
Sbjct: 47  GTYAPRPSNGPHKLREALPLVVSIDSTRQIQQHPADKPAQHRTDERDADKILLRNRLKYA 106

Query: 78  LTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLR 137
           LT REV AI  QR + VDGKVRTD TYP GF DVVSI K+ E+FR+LYD KGRF +H + 
Sbjct: 107 LTGREVNAITAQRLIKVDGKVRTDPTYPTGFQDVVSIEKSGEHFRILYDAKGRFIVHRIT 166

Query: 138 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
            EEA +KL KV+ VQ G +G+P++ T+DGRTIRYPDP IK NDT++ D+E  KI DF+ F
Sbjct: 167 AEEATYKLLKVKKVQLGARGVPHVVTHDGRTIRYPDPAIKVNDTVRFDIESQKILDFVTF 226

Query: 198 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPW 257
           D G  VMVTGGRN GR G+I  +E+H G F+ +HI+D LG +F+TRL NVF IG   KP 
Sbjct: 227 DTGATVMVTGGRNMGRAGVITGKERHLGGFDIVHIRDVLGRDFSTRLSNVFVIGTDGKPM 286

Query: 258 VSLPKGKGIKLSIIEEARKRQAAQAA 283
           +S+P+G G+KL+I EE  +R+  + A
Sbjct: 287 ISMPRGGGVKLTITEERDQRRRQKEA 312


>gi|355336756|gb|AER57863.1| 40S ribosomal protein S4 [Acytostelium subglobosum]
          Length = 267

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/227 (59%), Positives = 177/227 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GP K RECLPLI++LRNRLKYALT  EV  ILMQRH+ V+G VRTD  +P 
Sbjct: 25  GKWAPRPSAGPRKLRECLPLIIILRNRLKYALTGTEVTKILMQRHIQVNGVVRTDPRFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E+FRLL+DTKGRF+L  ++  EAKF L +V  V+ G +GIPY++T +G
Sbjct: 85  GFMDVITIEKTKEHFRLLFDTKGRFQLQRIQPNEAKFILTRVTKVETGLQGIPYVHTDNG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           +T RYPDP IK +DT+K+DL+  KIT FI F++ N+ MVTGG N GRVG+I NRE+H GS
Sbjct: 145 QTFRYPDPAIKIHDTVKIDLDTQKITAFIPFELNNLCMVTGGHNLGRVGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F+ +H+ D++GH FATRLGNVF IGKGS  +VSL   KG++ S +++
Sbjct: 205 FDIVHVTDSVGHSFATRLGNVFVIGKGSTTFVSLLSSKGVRKSRMDD 251


>gi|164656677|ref|XP_001729466.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
 gi|159103357|gb|EDP42252.1| hypothetical protein MGL_3501 [Malassezia globosa CBS 7966]
          Length = 287

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 142/260 (54%), Positives = 179/260 (68%), Gaps = 25/260 (9%)

Query: 47  GLQAPKPSSGPHKSRECLPLIL-------------------------VLRNRLKYALTYR 81
           G  AP+PS+GPHK RE LPL+L                         +LRNRLKYALT R
Sbjct: 25  GTYAPRPSTGPHKLREALPLVLCLRLAKLICEQGVALVLALAVVIWILLRNRLKYALTGR 84

Query: 82  EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 141
           EV++I  QR + VD KVRTD T+P GFMDVVSI K+ E+FR+LYD KGRF +H +  EEA
Sbjct: 85  EVLSITQQRIIKVDNKVRTDPTFPTGFMDVVSIEKSGEHFRILYDVKGRFVVHRITAEEA 144

Query: 142 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 201
           ++KL KV+ VQ G KG+P I T+DGRT+RYPDPL++ANDT+K DL  NK+ DFIKFD G 
Sbjct: 145 QYKLLKVKRVQLGAKGVPLIVTHDGRTLRYPDPLVRANDTVKFDLINNKMVDFIKFDTGA 204

Query: 202 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
            VM+TGGRN GR G + +RE+H G F+ +H++D  G EF+TRL NVF IG   K W+S+P
Sbjct: 205 QVMITGGRNVGRAGQMIHRERHHGGFDIVHVRDPAGREFSTRLSNVFVIGDHEKRWISMP 264

Query: 262 KGKGIKLSIIEEARKRQAAQ 281
           +G G+KL+I EE   R   Q
Sbjct: 265 RGGGVKLTITEERDLRLKKQ 284


>gi|323457181|gb|EGB13047.1| hypothetical protein AURANDRAFT_69604 [Aureococcus anophagefferens]
          Length = 260

 Score =  290 bits (742), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 137/231 (59%), Positives = 170/231 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RECLPL+L+LRNRLKYA++ +E   I M +HV VDGKVRTD TYPA
Sbjct: 25  GAFAPRPSTGPHKLRECLPLVLILRNRLKYAISGQEAKQICMSKHVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S+  + + FRL+YDTKGRF LH + DEE  +KLC+V +V    K IP + T+DG
Sbjct: 85  GFMDVISMDASGDQFRLMYDTKGRFTLHRISDEEKGYKLCRVNAVYVTAKKIPVLTTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYPDP +  +DT+KLD+   KI  F KF+VG    +T GRN GRVG I   EKH GS
Sbjct: 145 RTVRYPDPSVAVHDTVKLDIATGKIVSFQKFEVGKTCTITKGRNTGRVGTIMTVEKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           F+ + ++DA  H FATRLGNVF IGK     V+LPKGKGIKL+IIEE  K+
Sbjct: 205 FDIVTVKDASNHTFATRLGNVFVIGKDDDLDVTLPKGKGIKLTIIEERTKK 255


>gi|341888765|gb|EGT44700.1| CBN-RPS-4 protein [Caenorhabditis brenneri]
 gi|341900288|gb|EGT56223.1| hypothetical protein CAEBREN_12475 [Caenorhabditis brenneri]
          Length = 259

 Score =  290 bits (741), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 143/235 (60%), Positives = 175/235 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P+ GPHK RE LPL L LRNRLKYAL Y E   IL QR V VDGKVRT   +P 
Sbjct: 24  GVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPT 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I +TNE FR+LYDTKGR+ +H ++  EA FKLCKV+SV+   KG+P + T DG
Sbjct: 84  GFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI  ++   KITDF+KF+ GN+  VTGGRN GRVGII +RE+  G+
Sbjct: 144 RTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGA 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           F+ IHI+DA GH FATR+ NVF IGKG+K  VSLP G G++L+I EE  KR A +
Sbjct: 204 FDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGGGVRLTIAEERDKRMAQK 258


>gi|403308090|ref|XP_003944510.1| PREDICTED: 40S ribosomal protein S4, X isoform [Saimiri boliviensis
           boliviensis]
          Length = 360

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/237 (59%), Positives = 172/237 (72%), Gaps = 20/237 (8%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT                     D+    
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALT--------------------GDEXXXX 64

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
                +SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 65  XXXXXISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 124

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 125 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 184

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F  +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ +
Sbjct: 185 FNVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 241


>gi|331216263|ref|XP_003320811.1| 40S ribosomal protein S4 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309299801|gb|EFP76392.1| 40S ribosomal protein S4-A [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 265

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 135/235 (57%), Positives = 178/235 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+ + GPHK RE LPL ++LR+RLKYALT REV  I+ QR + +D KVRTD  +P 
Sbjct: 26  GTYAPRSNPGPHKLRESLPLSVLLRHRLKYALTGREVTLIVAQRLIKIDNKVRTDPKFPT 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K+ E+FR+++D KGRF +H +  EEA +KLCKV+ VQ G KG+P+I T+DG
Sbjct: 86  GFMDVISIEKSGEHFRVMFDIKGRFTVHRISAEEATYKLCKVKRVQLGNKGVPFIVTHDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK NDTIK DL +NKI D + F+VGN+VM TGGRN+GRVG I +REKH G 
Sbjct: 146 RTIRYPDPIIKVNDTIKFDLVQNKIVDTLPFEVGNLVMCTGGRNQGRVGTILSREKHVGG 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           ++ +H++D +   F+TR+GNV  IG   KP VSLP+G G+KL+I EE  +R+  +
Sbjct: 206 YDIVHVRDVIDRTFSTRIGNVQVIGAHGKPSVSLPRGGGVKLTIAEERDQRRKQK 260


>gi|444721070|gb|ELW61824.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 252

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 136/227 (59%), Positives = 171/227 (75%), Gaps = 5/227 (2%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +PS+GPHK RECLPLI+ LRNRLKYAL   EV  I MQR + +DGKVRTD TYPAGFM
Sbjct: 28  ALRPSTGPHKLRECLPLIIFLRNRLKYALAGDEVKKICMQRFIKIDGKVRTDTTYPAGFM 87

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+Y       +H +  +EA++KLCKVR +  G KG P++ T+D  TI
Sbjct: 88  DVISIDKTRENFRLIY-----VAVHRITPQEAQYKLCKVRKIFEGTKGTPHLVTHDAHTI 142

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
            YPDPLIK NDTI++D+E  K +DFI+FD GN+ MVTGG N GR+G+I NRE+H GS + 
Sbjct: 143 CYPDPLIKVNDTIQIDVETGKSSDFIEFDTGNLCMVTGGANLGRIGVITNRERHPGSSDV 202

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARK 276
           +H++DA  + FATRL N+F IGKG KPW+SLP+GKG+ L+I  E  K
Sbjct: 203 VHVKDANDNSFATRLSNIFVIGKGHKPWISLPRGKGVHLTIARERDK 249


>gi|429329492|gb|AFZ81251.1| 40S ribosomal protein S4, putative [Babesia equi]
          Length = 263

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 175/238 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK RECLPL+++LRNRLKYALTY EV  I+MQR V VDGKVRTD TYP 
Sbjct: 25  GKYAPKASPGPHKLRECLPLLVLLRNRLKYALTYDEVKLIVMQRLVKVDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD+VS+ +TNE FR+LYDTKGRF  H +  EEA +KLC+V+    G K +    T+DG
Sbjct: 85  GFMDIVSLDRTNEFFRMLYDTKGRFCPHKITPEEASYKLCRVKKTFLGPKEVNIAITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRY  P IKA D++++DL   KI DF+KF++GN+VMVTGG N GRVG I N+EKH GS
Sbjct: 145 RTIRYVHPEIKAGDSVRVDLATGKILDFLKFEIGNLVMVTGGHNVGRVGTIVNKEKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ IHI+D+    F+TR  NVF IG GS+P+VSLP   GI+ SIIE+   R A  A A
Sbjct: 205 FDLIHIKDSQDSTFSTRSSNVFVIGLGSQPYVSLPSDNGIRKSIIEQRAIRLAKAARA 262


>gi|356565689|ref|XP_003551070.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4-like
           [Glycine max]
          Length = 230

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 131/159 (82%), Positives = 149/159 (93%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           + VSIPKTNEN RLLYDTKGRFRLHS+RD+EAKFKLCKVRSV FG KGIPY+NTYDGRTI
Sbjct: 14  EAVSIPKTNENIRLLYDTKGRFRLHSIRDDEAKFKLCKVRSVXFGPKGIPYLNTYDGRTI 73

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
            YPDPLI+ANDT+KLDLE+ +++ FIKFDVGN+VMVTGGRNRG VG+IKNREKHKGSF+T
Sbjct: 74  HYPDPLIRANDTVKLDLEKTRLSIFIKFDVGNVVMVTGGRNRGCVGVIKNREKHKGSFKT 133

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 268
           IH+QDA GHEFA+R+GNVFTIGKG+KPW+SL KGKGIKL
Sbjct: 134 IHVQDATGHEFASRMGNVFTIGKGTKPWISLAKGKGIKL 172


>gi|268535888|ref|XP_002633079.1| C. briggsae CBR-RPS-4 protein [Caenorhabditis briggsae]
          Length = 259

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 142/235 (60%), Positives = 174/235 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P+ GPHK RE LPL L LRNRLKYAL Y E   IL QR V VDGKVRT   +P 
Sbjct: 24  GVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPT 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I +TNE FR+LYDTKGR+ +H ++  EA FKLCKV+SV+   KG+P + T DG
Sbjct: 84  GFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI  ++   KITDF+KF+ GN+  VTGGRN GR+GII +RE+  G+
Sbjct: 144 RTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPGNLAYVTGGRNVGRIGIIGHRERLPGA 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
            + IHI+DA GH FATR+ NVF IGKG+K  VSLP G G++LSI EE  KR A +
Sbjct: 204 SDIIHIKDAAGHSFATRISNVFVIGKGNKALVSLPSGNGVRLSIAEERDKRIAQK 258


>gi|167393127|ref|XP_001740437.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
 gi|165895490|gb|EDR23170.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
           SAW760]
          Length = 308

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 7   GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 67  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 127 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 187 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 246

Query: 284 A 284
            
Sbjct: 247 G 247


>gi|37779112|gb|AAP20216.1| 40S ribosomal protein S4 [Pagrus major]
          Length = 225

 Score =  286 bits (732), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 131/201 (65%), Positives = 162/201 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAKYKLCKVKKLIVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL+  KITDFIKFD  N+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTANLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNV 247
           F+ +H+ D+ G+ FATRL N+
Sbjct: 205 FDVVHVTDSTGNNFATRLSNI 225


>gi|401396346|ref|XP_003879799.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
 gi|325114207|emb|CBZ49764.1| hypothetical protein NCLIV_002520 [Neospora caninum Liverpool]
          Length = 263

 Score =  286 bits (731), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/226 (62%), Positives = 182/226 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS GPHK RE +PL+++LRNRL+YALTYREV+ I+MQR + VD KVRTD+ YPA
Sbjct: 25  GHYAPRPSPGPHKLRESVPLVVLLRNRLRYALTYREVMMIVMQRLIKVDNKVRTDQCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FR+L+DTKGRF  H +RDEEA +KLC+V+ V  G KG+P + T+DG
Sbjct: 85  GFMDVISIEKTKEHFRMLFDTKGRFVPHPIRDEEASYKLCRVKKVVVGPKGVPALITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RYP P IKA+D ++LDL   KI D +KF+ GN+ MVTGG N GRVG++ +RE+H G 
Sbjct: 145 RTMRYPHPSIKAHDCVRLDLNTGKIVDTLKFEAGNLAMVTGGHNVGRVGVVVHRERHLGG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
           F+ IH++DA G+EFATR+ NVF IGKG K W+SLPK KGI+LSI+E
Sbjct: 205 FDIIHLRDAKGNEFATRISNVFIIGKGEKAWISLPKEKGIRLSIME 250


>gi|308491676|ref|XP_003108029.1| CRE-RPS-4 protein [Caenorhabditis remanei]
 gi|308249976|gb|EFO93928.1| CRE-RPS-4 protein [Caenorhabditis remanei]
          Length = 259

 Score =  286 bits (731), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 141/235 (60%), Positives = 174/235 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P+ GPHK RE LPL L LRNRLKYAL Y E   IL QR V VDGKVRT   +P 
Sbjct: 24  GVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRIVRVDGKVRTCHKFPT 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I +TNE FR+LYDTKGR+ +H ++  EA FKLCKVRSV+   KG+P + T DG
Sbjct: 84  GFMDVVAIDRTNEYFRMLYDTKGRYIVHRIQAAEADFKLCKVRSVRTLNKGVPVLTTTDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI  ++   KI+DF+KF+ GN+  VTGGRN GR+GII +RE+  G+
Sbjct: 144 RTIRYPDPHVKVNDTIVFNINTQKISDFVKFEPGNLAYVTGGRNVGRIGIIGHRERLPGA 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
            + IHI+D+ GH FATR+ NVF IGKG+K  VSLP G G++LSI EE  KR A +
Sbjct: 204 SDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPSGNGVRLSIAEERDKRIAQK 258


>gi|167379757|ref|XP_001735270.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
 gi|165902828|gb|EDR28553.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
           SAW760]
          Length = 317

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 16  GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 75

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 76  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 135

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 136 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 195

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 196 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 255

Query: 284 A 284
            
Sbjct: 256 G 256


>gi|167389537|ref|XP_001738997.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
 gi|165897520|gb|EDR24644.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
           SAW760]
          Length = 390

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 89  GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 148

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 149 GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 208

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 209 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 268

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 269 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 328

Query: 284 A 284
            
Sbjct: 329 G 329


>gi|67465453|ref|XP_648911.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
 gi|67466127|ref|XP_649211.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
 gi|67481379|ref|XP_656039.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
 gi|167381290|ref|XP_001735654.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
 gi|56465221|gb|EAL43529.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56465596|gb|EAL43825.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56473205|gb|EAL50644.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|165902270|gb|EDR28139.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
           SAW760]
          Length = 326

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 25  GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 85  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 145 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 205 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 264

Query: 284 A 284
            
Sbjct: 265 G 265


>gi|167391306|ref|XP_001739715.1| 40S ribosomal protein S4, X isoform [Entamoeba dispar SAW760]
 gi|165896474|gb|EDR23879.1| 40S ribosomal protein S4, X isoform, putative [Entamoeba dispar
           SAW760]
          Length = 326

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 25  GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 85  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 145 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 205 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 264

Query: 284 A 284
            
Sbjct: 265 G 265


>gi|17543386|ref|NP_501103.1| Protein RPS-4 [Caenorhabditis elegans]
 gi|75023042|sp|Q9N3X2.1|RS4_CAEEL RecName: Full=40S ribosomal protein S4
 gi|351051215|emb|CCD74049.1| Protein RPS-4 [Caenorhabditis elegans]
          Length = 259

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/235 (60%), Positives = 173/235 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P+ GPHK RE LPL L LRNRLKYAL Y E   IL QR V VDGKVRT   +P 
Sbjct: 24  GVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPT 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I +TNE FR+LYDTKGR+ +H ++  EA FKLCKV+SV+   KG+P + T DG
Sbjct: 84  GFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI  ++   KITD +KF+ GN+  VTGGRN GRVGII +RE+  G+
Sbjct: 144 RTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGA 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
            + IHI+D+ GH FATR+ NVF IGKG+K  VSLP G GI+LSI EE  KR A +
Sbjct: 204 SDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKRMAQK 258


>gi|428174786|gb|EKX43680.1| small subunit ribosomal protein S4e, cytoplasmic [Guillardia theta
           CCMP2712]
          Length = 263

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 137/233 (58%), Positives = 174/233 (74%), Gaps = 1/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK REC+PL+L++RNRLKYALTY E   I+  R + VDGK+RTD TYP 
Sbjct: 25  GVFAPRPSAGPHKLRECIPLLLLIRNRLKYALTYSEAKVIMNSRSIKVDGKIRTDVTYPC 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRLL+DTKGRF LH L   +A+ KLC+V+S+  G   +PYI T+DG
Sbjct: 85  GFMDVLSIEKTGEHFRLLHDTKGRFVLHRLTQADAQHKLCRVKSLGVGINKVPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDT+++DL  N I  F KF+VGN+  +TGG N GRVGII++ EKH GS
Sbjct: 145 RTIRYPDPLIKPNDTVQIDLATNTIIGFSKFEVGNVCAITGGHNIGRVGIIQSTEKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVS-LPKGKGIKLSIIEEARKRQ 278
              +HI+D  G  +ATR  NVF +  G KP  + + + +GIK SIIEE R+RQ
Sbjct: 205 HNIVHIKDKTGATWATRQSNVFVLATGKKPEKAYILRTQGIKHSIIEEQRRRQ 257


>gi|440466935|gb|ELQ36176.1| 40S ribosomal protein S4-A [Magnaporthe oryzae Y34]
 gi|440478756|gb|ELQ59557.1| 40S ribosomal protein S4-A [Magnaporthe oryzae P131]
          Length = 280

 Score =  283 bits (723), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 148/256 (57%), Positives = 176/256 (68%), Gaps = 19/256 (7%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPLI+ +RNRLKYAL  RE  AILMQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPKPSPGPHKQRECLPLIVFIRNRLKYALNGRETKAILMQRLVKVDGKVRTDSTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF----GQKGIP--- 159
           GFMDVVSI KT ENFRL+YDTKGRF +H ++ EEA++KL K          G  G P   
Sbjct: 85  GFMDVVSIEKTGENFRLVYDTKGRFTVHRIQAEEAEYKLGKPLDQALVDPQGPLGRPEPS 144

Query: 160 ---------YINTYDGRT--IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 208
                    +   + GR   IRYPDPLIK NDT+K++L+  KITDFIKFD G + MVT G
Sbjct: 145 DLFRYEVLGWKWDFWGRNGCIRYPDPLIKVNDTVKINLDTGKITDFIKFDTGALAMVTAG 204

Query: 209 RNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKL 268
            N GRVG+I +RE+H G F  +H++DA+ + F TR  NVF IG   KPW+SLPKGKG+KL
Sbjct: 205 NNMGRVGVITHRERHDGGFNIVHLKDAIDNTFTTRESNVFVIGT-EKPWISLPKGKGVKL 263

Query: 269 SIIEEARKRQAAQAAA 284
           +I EE  +R+A   A 
Sbjct: 264 TIAEERDRRRAQTIAG 279


>gi|156088951|ref|XP_001611882.1| ribosomal protein S4e [Babesia bovis T2Bo]
 gi|154799136|gb|EDO08314.1| ribosomal protein S4e, putative [Babesia bovis]
          Length = 262

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/233 (59%), Positives = 173/233 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK  ECLPLIL+LRNRLKYALTY EV  I+MQ+ V +DGKVRTD TYP 
Sbjct: 25  GRYAPKPSPGPHKKTECLPLILLLRNRLKYALTYDEVKLIVMQKVVRIDGKVRTDMTYPI 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVS+ +TNE+FRLLYDTKGRF  H +  EEA +KLC+V     G K +    T+DG
Sbjct: 85  GFMDVVSLERTNEHFRLLYDTKGRFVPHKITPEEASYKLCRVIKTFLGPKEVGMAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+  P +K  D++++DLE  K+ +F KF+VGN+VM+TGG N+GRVG I ++E+H GS
Sbjct: 145 RTIRFVHPDVKPGDSLRIDLETGKVLEFFKFEVGNLVMITGGHNQGRVGTIVHKERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ IH++D LG+ F TR  NVF IG G+  +VSLPK +GIK  IIE+   R A
Sbjct: 205 FDLIHVRDELGNNFCTRCSNVFVIGVGTNNYVSLPKERGIKKGIIEDRADRLA 257


>gi|2500489|sp|P55832.1|RS4_HORSE RecName: Full=40S ribosomal protein S4
 gi|4432936|dbj|BAA21075.1| ribosomal protein S4 [Macaca fuscata]
 gi|4432938|dbj|BAA21077.1| ribosomal protein S4 [Felis catus]
 gi|4432940|dbj|BAA21079.1| ribosomal protein S4 [Canis lupus familiaris]
 gi|4432941|dbj|BAA21080.1| ribosomal protein S4 [Equus caballus]
 gi|4432942|dbj|BAA21081.1| ribosomal protein S4 [Sus scrofa]
          Length = 194

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 131/189 (69%), Positives = 156/189 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 6   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 65

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 66  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 125

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 126 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 185

Query: 227 FETIHIQDA 235
           F+ +H++DA
Sbjct: 186 FDVVHVKDA 194


>gi|395748095|ref|XP_003778710.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
           1-like [Pongo abelii]
          Length = 266

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 133/235 (56%), Positives = 168/235 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  +V  I MQR + +DG+VR   TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDDVKKICMQRFIKIDGEVRVAITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV  I KT E+F L+YDTKG F ++ +  EEAK+ LCKVR V  G KGIPY+ T+D 
Sbjct: 85  GFMDVTGIEKTGEHFCLVYDTKGCFAVYRITVEEAKYNLCKVRKVTMGMKGIPYLVTHDT 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TI Y DPLIK N+T+++DL   KI +FIKF  GN+ MV GG +   VG+  NRE+H GS
Sbjct: 145 GTIHYADPLIKVNNTVQIDLGTGKIINFIKFHAGNVCMVIGGASLSHVGVTTNRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
              +H++DA G+  A RL N+F  G GSKPW+SLP+ KG +L+I EE  KR A +
Sbjct: 205 LSVVHVRDANGNSLALRLSNIFVTGNGSKPWISLPREKGTRLTIAEEGEKRLATK 259


>gi|281182957|ref|NP_001162261.1| 40S ribosomal protein S4, X isoform [Papio anubis]
 gi|159487313|gb|ABW97203.1| ribosomal protein S4, X-linked (predicted) [Papio anubis]
          Length = 198

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 160/197 (81%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCK
Sbjct: 1   MQRFIKIDGKVRTDITYPAGFMDVMSIDKTGENFRLIYDTKGRFAVHCITPEEAKYKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR +    KG+P++ T+D  TIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTG
Sbjct: 61  VRKIFVSTKGVPHLVTHDAHTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           G N GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F  GKG+KPW+SLP+GKGI+
Sbjct: 121 GANLGRIGVITNRERHPGSFDVVHVKDANGNGFATRLSNIFVTGKGNKPWISLPRGKGIR 180

Query: 268 LSIIEEARKRQAAQAAA 284
           L+I EE  KR AA+ ++
Sbjct: 181 LTIAEERDKRLAAKQSS 197


>gi|440293545|gb|ELP86648.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
 gi|440298945|gb|ELP91560.1| 40S ribosomal protein S4, putative [Entamoeba invadens IP1]
          Length = 328

 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 139/231 (60%), Positives = 167/231 (72%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL++RNRL YAL  REV  IL  R+V +DGKVRTD  +P 
Sbjct: 25  GTFAPKPSGGPHGMKECLPLILIMRNRLHYALNAREVQMILKNRNVKIDGKVRTDSRFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T E FRLLY+TK RF L  L  E++  KLCKV     G  GIPYI T+DG
Sbjct: 85  GFMDVLSIPRTKEYFRLLYNTKRRFCLVPLSKEQSTIKLCKVEKRTLGTFGIPYIITHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P I+ANDTIKLDL  NKI DF+KFDVGN  M+ GG + GR+G++  RE H GS
Sbjct: 145 RTIRYPHPEIQANDTIKLDLVNNKIVDFVKFDVGNTAMLIGGNSMGRIGVVVKREVHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FE +HI+DA G  F TRL NVF IGKG++  V+LP  +GIK  +I+   +R
Sbjct: 205 FEIVHIKDANGTIFTTRLANVFIIGKGTETLVNLPLDQGIKKPLIKAVNER 255


>gi|4432939|dbj|BAA21078.1| ribosomal protein S4 [Bos taurus]
          Length = 194

 Score =  279 bits (714), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 130/189 (68%), Positives = 155/189 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 6   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDVTYPA 65

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 66  GFMDVISIDKIGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 125

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 126 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 185

Query: 227 FETIHIQDA 235
           F+ +H++DA
Sbjct: 186 FDVVHVKDA 194


>gi|188572462|gb|ACD65137.1| putative 40S ribosomal protein RPS4 [Phoronis muelleri]
          Length = 229

 Score =  279 bits (713), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/205 (62%), Positives = 159/205 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALTY E   I+MQR + VDGKVRTD  YPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLMVFLRNRLKYALTYDECKKIVMQRLIKVDGKVRTDFCYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H +  EEA +KLCKVR V  G KG+P I T+DG
Sbjct: 85  GFMDVITIEKTGENFRLIYDVKGRFTVHRITKEEAGYKLCKVRKVYTGPKGVPLIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+ K NDT+++D+   KI DFIKFD GN+ M+TGGRN  RVG++ +RE+H GS
Sbjct: 145 RTIRYPDPMCKVNDTVQVDIASGKIKDFIKFDSGNLCMITGGRNLRRVGLVTHRERHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIG 251
           F+  HI+D  GH FAT++G    IG
Sbjct: 205 FDVCHIKDVNGHTFATKVGKCVIIG 229


>gi|260950591|ref|XP_002619592.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
 gi|238847164|gb|EEQ36628.1| 40S ribosomal protein S4 [Clavispora lusitaniae ATCC 42720]
          Length = 224

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 129/194 (66%), Positives = 156/194 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQ HV VDGKVRTD TYPA
Sbjct: 7   GTYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQEHVKVDGKVRTDSTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H +  EE  +KL KV+ +  G+K IPY+ T+DG
Sbjct: 67  GFMDVITLEATNENFRLVYDIKGRFTVHRITAEEGSYKLGKVKKIALGKKAIPYVVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP I+ANDT+K+DL   KITDFIKFD G +VMVTGG+N GRVG+I +REKH+G 
Sbjct: 127 RTIRYPDPAIRANDTVKIDLATGKITDFIKFDTGRLVMVTGGKNLGRVGVIVHREKHEGG 186

Query: 227 FETIHIQDALGHEF 240
           F+ +HI+DAL + F
Sbjct: 187 FDLVHIKDALDNTF 200


>gi|76803657|gb|ABA55738.1| 40S ribosomal protein S4 [Mytilus edulis]
          Length = 204

 Score =  277 bits (708), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 129/200 (64%), Positives = 161/200 (80%)

Query: 82  EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 141
           EV  I+ QR + VDGKVRTD T+PAGFMDVV+I KT ENFRLLYD KGRF +H ++ EEA
Sbjct: 5   EVKKIVHQRLIKVDGKVRTDMTFPAGFMDVVTIDKTQENFRLLYDVKGRFAVHRIKSEEA 64

Query: 142 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 201
           K+KLC+V+ V    KG+ Y+ T+DGRTIRYPDPL+K NDTI +D+   KI DFIKFD GN
Sbjct: 65  KYKLCRVKKVGVALKGVCYVVTHDGRTIRYPDPLVKVNDTIMVDIATGKIKDFIKFDSGN 124

Query: 202 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           + M+TGG N GRVG+I++RE+H GSF+ +HI+D+LGH FATRL  VF IGKG+KP+VSLP
Sbjct: 125 LCMITGGHNLGRVGVIQHRERHPGSFDIVHIKDSLGHSFATRLSYVFIIGKGNKPYVSLP 184

Query: 262 KGKGIKLSIIEEARKRQAAQ 281
           +GKG+KLSI EE  +R AA+
Sbjct: 185 RGKGVKLSIAEERDRRMAAK 204


>gi|432089928|gb|ELK23579.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 210

 Score =  276 bits (707), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 137/238 (57%), Positives = 166/238 (69%), Gaps = 35/238 (14%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK                        
Sbjct: 67  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK------------------------ 102

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
                       NDTI+ DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 103 -----------VNDTIQTDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 151

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 152 FDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 209


>gi|207344483|gb|EDZ71609.1| YHR203Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323308725|gb|EGA61964.1| Rps4bp [Saccharomyces cerevisiae FostersO]
 gi|323333218|gb|EGA74617.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
 gi|323336905|gb|EGA78163.1| Rps4ap [Saccharomyces cerevisiae Vin13]
 gi|323337382|gb|EGA78635.1| Rps4bp [Saccharomyces cerevisiae Vin13]
 gi|323347847|gb|EGA82109.1| Rps4ap [Saccharomyces cerevisiae Lalvin QA23]
 gi|323348218|gb|EGA82468.1| Rps4bp [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354726|gb|EGA86561.1| Rps4bp [Saccharomyces cerevisiae VL3]
 gi|365764787|gb|EHN06308.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|365765294|gb|EHN06806.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 196

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/195 (65%), Positives = 156/195 (80%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRHV VDGKVRTD TYPAGFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1   MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTG
Sbjct: 61  VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180

Query: 268 LSIIEEARKRQAAQA 282
           LSI EE  +R+A Q 
Sbjct: 181 LSIAEERDRRRAQQG 195


>gi|219110737|ref|XP_002177120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411655|gb|EEC51583.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 261

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 130/234 (55%), Positives = 171/234 (73%), Gaps = 3/234 (1%)

Query: 41  THYN---SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGK 97
           +H+N     G+ APKPS GPHK RECLP+ + LR+RLKYALT +E + I M+R V VDGK
Sbjct: 16  SHWNLGKMTGVFAPKPSPGPHKERECLPICIALRDRLKYALTNKECMQICMERCVKVDGK 75

Query: 98  VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 157
           VRTD  YP GFMDVV + K+ + FR+L+D+KGRF LH +  EE+++KLC++  +  G K 
Sbjct: 76  VRTDHNYPTGFMDVVELEKSGDRFRILFDSKGRFVLHRINREESQYKLCRINKIYIGSKK 135

Query: 158 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           IP   T+DGRTIRYPDP  K NDT+K+DL   K++D IKF++G +V +  GRN GRVG +
Sbjct: 136 IPVAVTHDGRTIRYPDPDAKVNDTVKVDLATGKMSDIIKFELGAMVTLVRGRNAGRVGTL 195

Query: 218 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSII 271
            + E+H  SF+ + ++DA GH FATRL NVF IG G+ P +SLPKG+GIK SII
Sbjct: 196 MHIERHLNSFDIVTVKDAKGHTFATRLHNVFVIGNGTTPQISLPKGRGIKKSII 249


>gi|365759818|gb|EHN01586.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|365760266|gb|EHN01998.1| Rps4ap [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|401837629|gb|EJT41534.1| RPS4B-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 196

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/195 (64%), Positives = 156/195 (80%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRHV VDGKVRTD TYPAGFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1   MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V+ VQ G+KG+PY+ T+DGRT+RYPDP IK NDT+K+DL   KITDFIKFD G +V VTG
Sbjct: 61  VKKVQLGKKGVPYVVTHDGRTLRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180

Query: 268 LSIIEEARKRQAAQA 282
           LSI EE  +R+A Q 
Sbjct: 181 LSIAEERDRRRAQQG 195


>gi|156843178|ref|XP_001644658.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115305|gb|EDO16800.1| hypothetical protein Kpol_526p53 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 196

 Score =  273 bits (698), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 125/195 (64%), Positives = 155/195 (79%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRHV VDGKVRTD TYPAGFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1   MQRHVKVDGKVRTDATYPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL   KITD+IKFD G +V VTG
Sbjct: 61  VKKVQLGKKGVPYVVTHDGRTIRYPDPSIKVNDTVKIDLATGKITDYIKFDAGKLVYVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRN GR+G I ++E+H G F+ +HI+D L + F TRL NVF IG+  KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDTLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180

Query: 268 LSIIEEARKRQAAQA 282
           L+I EE  +R+A Q 
Sbjct: 181 LTIAEERDRRRAQQG 195


>gi|323304309|gb|EGA58083.1| Rps4ap [Saccharomyces cerevisiae FostersB]
          Length = 196

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 126/195 (64%), Positives = 155/195 (79%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRHV VDGKVRTD T PAGFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1   MQRHVKVDGKVRTDTTXPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTG
Sbjct: 61  VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+  KP++SLPKGKGIK
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIK 180

Query: 268 LSIIEEARKRQAAQA 282
           LSI EE  +R+A Q 
Sbjct: 181 LSIAEERDRRRAQQG 195


>gi|55982009|gb|AAV69397.1| 40S ribosomal protein S4 [Aedes aegypti]
          Length = 270

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/244 (56%), Positives = 172/244 (70%), Gaps = 12/244 (4%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRH+ +DGKVRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNTEVTKIVMQRHIKIDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 85  GFMDVITIEKTNENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  ND+I+ D+   K+ D +KF+ GN  M+TGGRN GR G +  REKH GS
Sbjct: 145 RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNPCMITGGRNLGRCGTVIQREKHPGS 204

Query: 227 FETIHIQDALGHEFATRL-GNVF------TIGKGSKPWVSLPKGKGI-KLSIIEEARKRQ 278
           FE +H++DA GH FATR    VF      T G  S+     PKG+G+ +L  + E    Q
Sbjct: 205 FEIVHVKDATGHVFATRSEPTVFHHWVRATQGFSSR----CPKGQGVSRLVHLAEGNAEQ 260

Query: 279 AAQA 282
           A  A
Sbjct: 261 ANWA 264


>gi|223996813|ref|XP_002288080.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
 gi|220977196|gb|EED95523.1| RS4, ribosomal protein 4 [Thalassiosira pseudonana CCMP1335]
          Length = 261

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/233 (53%), Positives = 171/233 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK RECLP+ ++LR RLKYALT +E   I M+R V +DGKVRTD  YPA
Sbjct: 25  GVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKECQQICMERCVKIDGKVRTDHNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV + K+ + FRLLYDTKGRF LH ++ +EA++KLC+++      K +P   T+DG
Sbjct: 85  GFMDVVELEKSGDRFRLLYDTKGRFVLHRIQKDEAEYKLCRIQKGYMSAKKVPVAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+R+PDP +  NDT+K+++   K++D  KF++G ++MVT G N GRVG +++ EKH GS
Sbjct: 145 RTLRFPDPDVAVNDTVKVNIATGKMSDIYKFEIGAMIMVTKGHNAGRVGTLEHVEKHDGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  + I+D  G+ FATR  NVF IG G  P V+LPKG+GIK +I++E  + +A
Sbjct: 205 FSIVTIKDKKGNTFATRQANVFVIGSGDHPQVTLPKGRGIKKTILQERAEAEA 257


>gi|160331849|ref|XP_001712631.1| rps4 [Hemiselmis andersenii]
 gi|159766080|gb|ABW98306.1| rps4 [Hemiselmis andersenii]
          Length = 250

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/221 (58%), Positives = 163/221 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP P SGPHK  E  PLIL+LRNRLKYAL  +E + IL QR + VD K+RT+K YPA
Sbjct: 25  GIWAPNPKSGPHKKFESFPLILILRNRLKYALNNQEAVQILQQRSIKVDKKIRTEKNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MD++SI KT ENFRLL DT GRF LH + ++E+ FKLCKV     GQ+GIPYI T+DG
Sbjct: 85  GLMDIISIEKTEENFRLLVDTFGRFILHRIEEKESMFKLCKVTKSTKGQRGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+PDP IK NDTI  DL E KI DFIKF+VG++ ++TGG N GR+GI+  + K+   
Sbjct: 145 RTIRFPDPFIKTNDTILFDLSEKKIIDFIKFEVGSLCIITGGPNVGRIGIVLQQGKNFLE 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
            E I ++DA G EF+T+   +F IGKG K ++SLPKGKGI+
Sbjct: 205 EEMIKLKDAKGSEFSTKFSFIFVIGKGKKSFISLPKGKGIR 245


>gi|84997205|ref|XP_953324.1| 40s ribosomal protein s4 [Theileria annulata strain Ankara]
 gi|65304320|emb|CAI76699.1| 40s ribosomal protein s4, putative [Theileria annulata]
          Length = 254

 Score =  271 bits (692), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/233 (55%), Positives = 172/233 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHKSRECLPL+++LRNRLKYALTY EV  I+ QR V VDGKVRTD TYP 
Sbjct: 17  GKYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRTDITYPT 76

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVS+ KTNE FR+LYDTKGRF  H + DEEA +KLC+V+    G K +    T+DG
Sbjct: 77  GFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNLAVTHDG 136

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT R   P +KA D++++++   K+ +F+KF+ GN+VM+TGG N GRVG + ++EKH GS
Sbjct: 137 RTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGGHNVGRVGTVVSKEKHPGS 196

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +H++D+    F+TR  NVF IG G+K +VSLP  +G++ +IIE+  +R A
Sbjct: 197 FDLVHVKDSQDSTFSTRSTNVFVIGVGTKSYVSLPAERGLRKTIIEQRNERLA 249


>gi|328866983|gb|EGG15366.1| 40S ribosomal protein S4 [Dictyostelium fasciculatum]
          Length = 266

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/227 (57%), Positives = 163/227 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+P  GPHK RECLPLI+++RNRLKYALT +E   +LMQR V ++G VRTD  +P 
Sbjct: 26  GKYAPRPRPGPHKLRECLPLIILIRNRLKYALTAQECTMVLMQRLVKINGVVRTDPKFPV 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRLLYDTKG F+L  ++  EAKF L +V  V+ G  GIPY++T DG
Sbjct: 86  GFMDVITIDKTKENFRLLYDTKGHFQLQRIQPSEAKFILTRVTKVETGIHGIPYLHTEDG 145

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            T RYPDP I  +DT+K+DLE  KI   I     N+ M+ GG N GRVGII N EKH GS
Sbjct: 146 HTHRYPDPEIHRHDTVKVDLETGKIAAHIPLATHNLCMIIGGHNTGRVGIINNIEKHPGS 205

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           F+  +I D++GH FATRL NVF IG+G   +VSLP GKG++ S ++E
Sbjct: 206 FDVAYITDSVGHSFATRLSNVFIIGQGQTTFVSLPAGKGVRRSAVDE 252


>gi|71029346|ref|XP_764316.1| 40S ribosomal protein S4 [Theileria parva strain Muguga]
 gi|68351270|gb|EAN32033.1| 40S ribosomal protein S4, putative [Theileria parva]
          Length = 262

 Score =  270 bits (691), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 130/233 (55%), Positives = 173/233 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHKSRECLPL+++LRNRLKYALTY EV  I+ QR V VDGKVRTD TYP 
Sbjct: 25  GRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRTDITYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVS+ KTNE FR+LYDTKGRF  H + DEEA +KLC+V+    G K +    T+DG
Sbjct: 85  GFMDVVSLDKTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNLAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT R   P +KA D++++++   K+ +F+KF+ GN+VM+TGG N GRVG + ++EKH GS
Sbjct: 145 RTFRCVHPEVKAGDSLRVEVSTGKVLEFLKFEPGNLVMITGGHNVGRVGTVVSKEKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F+ +H++D+  + F+TR  NVF IG G+K +VSLP  +G++ +IIE+  +R A
Sbjct: 205 FDLVHVKDSQDNTFSTRSSNVFVIGVGTKSYVSLPYERGLRKTIIEQRNERLA 257


>gi|402909065|ref|XP_003917249.1| PREDICTED: 40S ribosomal protein S4, Y isoform 1-like [Papio
           anubis]
          Length = 246

 Score =  270 bits (690), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/227 (57%), Positives = 164/227 (72%), Gaps = 1/227 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+ PHK RECLPLI+ LRN+LKYALT  EV  I MQ  + +DG VR   TYPA
Sbjct: 7   GVFAPRPSTDPHKLRECLPLIVFLRNKLKYALTGDEVKNIRMQCFIKIDGTVRVATTYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT E+F L+YDTKG F ++ +  EEAK+ LCK R    G KGIPY+ ++D 
Sbjct: 67  GFMDVIGIEKTGEHFCLVYDTKGCFAVYRIPVEEAKYNLCKGRKSTVGMKGIPYLVSHDT 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TI YPDPLIK N  +K+DL   KI +FIKF  GN+ MV GG +  RVG+  NR++H GS
Sbjct: 127 GTIHYPDPLIKVNHAVKIDLGTGKIINFIKFHTGNVCMVIGGASLSRVGVTTNRQRHPGS 186

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
              +H++DA G+ FATRL N+F IG GSKPW+SLP+ KGI+L+I EE
Sbjct: 187 LN-VHVRDASGNSFATRLSNIFVIGNGSKPWISLPRRKGIRLTIAEE 232


>gi|403223747|dbj|BAM41877.1| 40S ribosomal protein S4 [Theileria orientalis strain Shintoku]
          Length = 261

 Score =  270 bits (690), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 132/236 (55%), Positives = 171/236 (72%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHKSRECLPL+++LRNRLKYALTY EV  I+ QR V VDGKVRTD TYP 
Sbjct: 25  GRYAPKASPGPHKSRECLPLLVLLRNRLKYALTYDEVKLIVKQRLVKVDGKVRTDMTYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVS+ +TNE FR+LYDTKGRF  H + DEEA +KLC+V+    G K +    T+DG
Sbjct: 85  GFMDVVSLDRTNEKFRMLYDTKGRFCPHKITDEEATYKLCRVKKTFLGPKEVNLAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT R   P +KA D++++++   KI +++KF+ GN+VMVTGG N GRVG + ++EKH GS
Sbjct: 145 RTFRCVHPEVKAGDSLRVEVATGKILEYLKFEPGNLVMVTGGHNVGRVGTVVSKEKHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           F+ +H++D+    F TR  NVF IG G+K +VSLP  +GI+ +IIE+   R A  A
Sbjct: 205 FDLVHVRDSNDSTFTTRSSNVFVIGVGTKSYVSLPAERGIRKTIIEQRNLRLAKSA 260


>gi|444722371|gb|ELW63068.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 618

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 158/203 (77%)

Query: 82  EVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEA 141
           EV  I  QR + +DGKVRTD TYPAGFMDV+ I KT ENFRL+YDTKGRF +H +  +EA
Sbjct: 113 EVKKICTQRFIKIDGKVRTDITYPAGFMDVIGIDKTGENFRLIYDTKGRFAVHRITPQEA 172

Query: 142 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 201
           K+KLCKVR +  G KGIP++ T+D RTIRY DPLIK NDTI++DLE  K +DFIKFD GN
Sbjct: 173 KYKLCKVRKIFLGTKGIPHLVTHDARTIRYLDPLIKVNDTIQIDLETGKSSDFIKFDTGN 232

Query: 202 IVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           + MV GG + GR+G+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KP +SLP
Sbjct: 233 LCMVAGGASLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPGISLP 292

Query: 262 KGKGIKLSIIEEARKRQAAQAAA 284
           +GKGI+L+I +E  KR AA+ + 
Sbjct: 293 RGKGIRLTIAKERDKRPAAKQST 315


>gi|444721029|gb|ELW61786.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 219

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 149/182 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQ  + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQWFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 145 RTIRYPDPLIKVNDTIQIDLKTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 204

Query: 227 FE 228
           FE
Sbjct: 205 FE 206


>gi|217071784|gb|ACJ84252.1| unknown [Medicago truncatula]
          Length = 196

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 123/136 (90%), Positives = 132/136 (97%)

Query: 146 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 205
            +VRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLE NKITDFIKFDVGN+VMV
Sbjct: 56  ARVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNVVMV 115

Query: 206 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 265
           TGGRNRGRVG+IKNREKHKG+FETIH+QDA GHEFATRLGN FTIGKG+KPWVSLPKGKG
Sbjct: 116 TGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNAFTIGKGTKPWVSLPKGKG 175

Query: 266 IKLSIIEEARKRQAAQ 281
           IKL++IEEARKRQAAQ
Sbjct: 176 IKLTVIEEARKRQAAQ 191


>gi|340546083|gb|AEK51840.1| X-linked ribosomal protein S4 [Heteronotia binoei]
          Length = 193

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/184 (68%), Positives = 151/184 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 10  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 69

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 70  GFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 129

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+++LE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 130 RTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 189

Query: 227 FETI 230
           F+ +
Sbjct: 190 FDVV 193


>gi|183231631|ref|XP_001913602.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
 gi|169802405|gb|EDS89621.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 318

 Score =  266 bits (681), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/241 (57%), Positives = 165/241 (68%), Gaps = 11/241 (4%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 25  GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AK  L        G   IPYI T+DG
Sbjct: 85  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKRVL--------GTGAIPYIVTHDG 136

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 137 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 196

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK---LSIIEEARKRQAAQAA 283
           FE +HI+DA G+ F TRL NVF IGKG++  V+LP  KGIK   L  + E  K+   Q A
Sbjct: 197 FEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETIKKNKMQKA 256

Query: 284 A 284
            
Sbjct: 257 G 257


>gi|402697610|gb|AFQ90991.1| X-linked ribosomal protein S4, partial [Malaclemys terrapin]
          Length = 193

 Score =  266 bits (680), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 126/184 (68%), Positives = 150/184 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 10  GVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 69

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 70  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDA 129

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 130 RTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 189

Query: 227 FETI 230
           F+ +
Sbjct: 190 FDVV 193


>gi|159114046|ref|XP_001707248.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
 gi|157435352|gb|EDO79574.1| Ribosomal protein S4 [Giardia lamblia ATCC 50803]
          Length = 268

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 171/240 (71%), Gaps = 3/240 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P++GPH  REC+PLIL+LRNRL YA TY E   IL  ++VL+DGK RTD T+P 
Sbjct: 25  GIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAETSMILQDKNVLIDGKPRTDPTFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV  IPK ++ FR+LYD KGRF L  ++  EA FKLC+V+ +  G KG+PY++T+D 
Sbjct: 85  GFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQKIFLGDKGMPYLSTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P P IK NDTIK++L+  KI ++ KFD+G IVMVTGGRN GR+G I+  +KH GS
Sbjct: 145 RTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGRNCGRIGTIQAIDKHMGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQAAQAAA 284
           +  I ++D  G EF TRL NVF IG  S P V++P  KGI+  II+  E R R  A+   
Sbjct: 205 YTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPTTKGIRPDIIKNRELRLRSIAKRGG 263


>gi|209879451|ref|XP_002141166.1| 40S ribosomal protein S4 [Cryptosporidium muris RN66]
 gi|209556772|gb|EEA06817.1| 40S ribosomal protein S4, putative [Cryptosporidium muris RN66]
          Length = 261

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/227 (54%), Positives = 170/227 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK REC+PL ++LRNRLK+ALTY+EV  I+MQR + VDGKVRTD  +P 
Sbjct: 25  GIYAPRPSSGPHKLRECIPLAILLRNRLKFALTYQEVKYIVMQRLIKVDGKVRTDTCFPL 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV++I + N+N R++YDTKGRF    +  +EA++KLCKV  V  G KG+P   T D 
Sbjct: 85  GLMDVITIDRINKNMRIMYDTKGRFVPVQVSSKEAQYKLCKVTRVALGPKGVPTATTNDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RY  P I+ANDT+K+DLE  K+ +FIK +VGN+  VTGGR++GRVG+I + E+ +G+
Sbjct: 145 RTLRYIHPEIRANDTVKIDLETGKVMEFIKCEVGNLCTVTGGRSQGRVGVITHLERKQGA 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
              + ++D  GH FAT + N+F +G+G K  V+LPK KGI+LS +E+
Sbjct: 205 QCIVSVRDKKGHTFATLIKNIFVLGEGDKSLVTLPKDKGIRLSNVED 251


>gi|307213994|gb|EFN89201.1| 40S ribosomal protein S4 [Harpegnathos saltator]
          Length = 198

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/196 (63%), Positives = 152/196 (77%)

Query: 87  LMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLC 146
           +MQR + VDGKVRTD  YPAGFMDV++I KT E FRL+YD KGRF  H +  EEAK+KLC
Sbjct: 1   MMQRLIKVDGKVRTDSNYPAGFMDVITIEKTGEFFRLIYDVKGRFTTHRITAEEAKYKLC 60

Query: 147 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 206
           KV+ VQ G KGIP++ T+DGRTIRYPDP+IK NDTI LD+   KI D I+FD GN+ M+T
Sbjct: 61  KVKRVQTGPKGIPFLVTHDGRTIRYPDPVIKVNDTIHLDIATGKILDSIRFDSGNLCMIT 120

Query: 207 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 266
            GRN GRVG + NRE+H GSF+  H++DA GH FATRL NVF IGKG+K +VSLP+ KG+
Sbjct: 121 SGRNLGRVGTVVNRERHPGSFDICHVKDAQGHTFATRLNNVFIIGKGTKAYVSLPRDKGV 180

Query: 267 KLSIIEEARKRQAAQA 282
           KLSI EE  +R AA+ 
Sbjct: 181 KLSIAEERDRRLAAKG 196


>gi|397590955|gb|EJK55222.1| hypothetical protein THAOC_25064 [Thalassiosira oceanica]
          Length = 261

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/233 (53%), Positives = 172/233 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS+GPHK RECLP+ ++LR RLKYALT +E   I M+R V +DGKVRTD  YPA
Sbjct: 25  GVWAPKPSAGPHKQRECLPVAIILRERLKYALTGKECQQICMERCVKIDGKVRTDYNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD+V + K+ + FRLLYDTKGRF LH +  +EA++KLC+++ V    K IP   T+DG
Sbjct: 85  GFMDIVELEKSGDIFRLLYDTKGRFVLHRVDKKEAEWKLCRIQKVYVTAKKIPVAVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+R+PDP +K NDT+K+++   K+ +   F++G++VMVT G N GRVGI+++ EKH GS
Sbjct: 145 RTLRFPDPNVKVNDTVKVNIATGKMGEIFPFEMGSVVMVTKGHNAGRVGILQHLEKHDGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           F  + ++D  G+ FATR  NVF IG G +  +SLPKG+GIK +II+E  + +A
Sbjct: 205 FSIVTVKDKKGNVFATRQSNVFIIGAGERVELSLPKGRGIKKNIIQERAEAEA 257


>gi|414587746|tpg|DAA38317.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 193

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 132/190 (69%), Positives = 150/190 (78%), Gaps = 19/190 (10%)

Query: 43  YNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           + S  L APKPSSGPHKSRECLPLIL++RNRLKYALTY EVI+ILMQ +VLVDGK+    
Sbjct: 15  FWSFFLWAPKPSSGPHKSRECLPLILIIRNRLKYALTYLEVISILMQHYVLVDGKM---- 70

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
                     S P   +       T G FRLH +RDE+AKFKLCKVRS+QFGQKGIPY+N
Sbjct: 71  ----------SFPSLRQ-----MRTTGFFRLHPIRDEDAKFKLCKVRSIQFGQKGIPYLN 115

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           TY+  TIRYPD LIKANDTIK++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKN+EK
Sbjct: 116 TYNDCTIRYPDLLIKANDTIKIELETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNKEK 175

Query: 223 HKGSFETIHI 232
           HKGSFETIH+
Sbjct: 176 HKGSFETIHV 185


>gi|414884607|tpg|DAA60621.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 361

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/183 (71%), Positives = 149/183 (81%), Gaps = 19/183 (10%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           APKPSSGPHKSRECLPLIL++RN LK ALTYREVI+ILMQRHVLVDGK+    ++P    
Sbjct: 190 APKPSSGPHKSRECLPLILIIRNMLKSALTYREVISILMQRHVLVDGKM----SFP---- 241

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
              S+ +T         T G FRL+ ++DE+AKF LCKVR +QFGQKGIPY+NTYD RTI
Sbjct: 242 ---SLRQTR--------TTGCFRLYPIKDEDAKFMLCKVRPIQFGQKGIPYMNTYDDRTI 290

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIKANDTI +DLE NKI DFIKFDVGN++MVTGGRN GRVG+IKNREKHK SFET
Sbjct: 291 RYPDPLIKANDTITIDLETNKIMDFIKFDVGNVIMVTGGRNTGRVGVIKNREKHKSSFET 350

Query: 230 IHI 232
           IH+
Sbjct: 351 IHV 353


>gi|324508881|gb|ADY43745.1| 40S ribosomal protein S4 [Ascaris suum]
          Length = 221

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 151/197 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P+SGPHK RE LPLIL LRNRLKYAL+Y E   I  QR + +DGKVRT+  +PA
Sbjct: 25  GVFAPRPTSGPHKLRESLPLILFLRNRLKYALSYNEARMICKQRLIKIDGKVRTEMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRLLYD KGR+ +H + + E +FKLCKV     G KG+P+I T+D 
Sbjct: 85  GFMDVITIEKTNETFRLLYDAKGRYTVHRITEAEGRFKLCKVVKKSVGPKGVPFIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI LD+   K  D++KFD GN+ MVTGGRN GRVG++ +REKH GS
Sbjct: 145 RTIRYPDPHVKVNDTIVLDIASGKFNDYVKFDQGNLCMVTGGRNMGRVGVVGHREKHPGS 204

Query: 227 FETIHIQDALGHEFATR 243
           F+ +H++DA GH FATR
Sbjct: 205 FDIVHVKDAAGHTFATR 221


>gi|402697606|gb|AFQ90988.1| X-linked ribosomal protein S4, partial [Draco beccarii]
          Length = 193

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 125/184 (67%), Positives = 150/184 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 10  GVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 69

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 70  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 129

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DLE  KIT+FIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 130 RTIRYPDPLIKVNDTIQIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 189

Query: 227 FETI 230
           F+ +
Sbjct: 190 FDVV 193


>gi|402697604|gb|AFQ90987.1| X-linked ribosomal protein S4, partial [Cyrtodactylus sp. JJF-2012]
          Length = 193

 Score =  264 bits (675), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 125/184 (67%), Positives = 150/184 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 10  GVFAPRPSTGPHKLREXLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 69

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 70  GFMDVISIEKTAEHFRLVYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 129

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI+++LE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GS
Sbjct: 130 RTIRYPDPLIKVNDTIQIELETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGS 189

Query: 227 FETI 230
           F+ +
Sbjct: 190 FDVV 193


>gi|308161402|gb|EFO63851.1| Ribosomal protein S4 [Giardia lamblia P15]
          Length = 268

 Score =  264 bits (674), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 130/240 (54%), Positives = 171/240 (71%), Gaps = 3/240 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P++GPH  REC+PL+L+LRNRL YA TY E   IL  ++VL+DGK RTD T+P 
Sbjct: 25  GIWAPRPTNGPHGLRECIPLVLILRNRLHYANTYAETSMILQDKNVLIDGKPRTDPTFPI 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV  IPK ++ FR+LYD KGRF L  ++  EA FKLC+V+ +  G KG+PY++T+D 
Sbjct: 85  GFMDVFEIPKVHKTFRVLYDVKGRFTLVPIQSNEAGFKLCRVQKIFLGDKGMPYLSTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P P IK NDTIK++L+  KI ++ KFD+G IVMVTGGRN GR+G I+  +KH GS
Sbjct: 145 RTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKIVMVTGGRNCGRIGTIQAIDKHMGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQAAQAAA 284
           +  I ++D  G EF TRL NVF IG  S P V++P  KGI+  II+  E R R  A+   
Sbjct: 205 YTMIRMKDTEGTEFLTRLCNVFVIGNDS-PAVAIPPTKGIRPDIIKNRELRLRSIAKRGG 263


>gi|189484049|gb|ACE00318.1| ribosomal protein S4 [Caenorhabditis brenneri]
          Length = 212

 Score =  264 bits (674), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 129/211 (61%), Positives = 158/211 (74%)

Query: 71  RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 130
           RNRLKYAL Y E   IL QR V VDGKVRT   +P GFMDVV+I +TNE FR+LYDTKGR
Sbjct: 1   RNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPTGFMDVVAIDRTNEYFRMLYDTKGR 60

Query: 131 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 190
           + +H ++  EA FKLCKV+SV+   KG+P + T DGRTIRYPDP +K NDTI  ++   K
Sbjct: 61  YVVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNINTQK 120

Query: 191 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 250
           ITDF+KF+ GN+  VTGGRN GRVGII +RE+  G+F+ IHI+DA GH FATR+ NVF I
Sbjct: 121 ITDFVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGAFDIIHIKDAAGHSFATRISNVFVI 180

Query: 251 GKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           GKG+K  VSLP G G++L+I EE  KR A +
Sbjct: 181 GKGNKALVSLPSGGGVRLTIAEERDKRMAQK 211


>gi|70946979|ref|XP_743149.1| ribosomal protein S4 [Plasmodium chabaudi chabaudi]
 gi|56522509|emb|CAH81099.1| ribosomal protein S4, putative [Plasmodium chabaudi chabaudi]
          Length = 266

 Score =  263 bits (671), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 129/235 (54%), Positives = 170/235 (72%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK SSGPHK  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K RTD T+P 
Sbjct: 30  GQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRTDCTFPV 89

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    T+DG
Sbjct: 90  GLMDVIHITKSNEYFRLLYDVKGRFVPHRITNEESKYKLCKVKKIILRKGKLSIAITHDG 149

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R+I Y  P +K NDTI+LDLE  K+ + +KF VGN+VMVT G + GRVG I + +K+ G+
Sbjct: 150 RSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSIDKNIGT 209

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           ++ IH++D+ G  FATRL N+F IG  +KP++SLP+ KGIKL IIEE R R  AQ
Sbjct: 210 YDIIHVKDSRGKVFATRLSNIFVIGDATKPYISLPREKGIKLDIIEERRNRLKAQ 264


>gi|340509077|gb|EGR34650.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
          Length = 260

 Score =  263 bits (671), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 125/233 (53%), Positives = 169/233 (72%), Gaps = 2/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTY 104
           G+   +PS GPHK RE LPL ++L+NRL YAL  R+V  IL   +++V VDGK R D+++
Sbjct: 25  GIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRDVTLILNDKEQNVFVDGKCRRDRSF 84

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDVVSIPKT+E FR+LYDTKGRF L +L  +EA+FKL KV+    G   +PYI T+
Sbjct: 85  PTGLMDVVSIPKTDEQFRVLYDTKGRFVLKTLNKQEAQFKLLKVKGKAIGPNQVPYIVTH 144

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIR+P+P IK  DTIK D+ +NKI +F   + GNI  V  G N GRVG+I + EKH 
Sbjct: 145 DSRTIRFPNPNIKIGDTIKYDIVKNKILEFAHLESGNICFVQNGNNIGRVGLITHIEKHP 204

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           GSF+ +H++D  G+ FATR+GN+F IG+G KPWVSLP+G GI  +++E+ +++
Sbjct: 205 GSFDIVHVKDTKGNSFATRIGNIFVIGQGKKPWVSLPEGDGIYETVMEQRQRK 257


>gi|393912410|gb|EJD76721.1| 40S ribosomal protein S4, variant [Loa loa]
          Length = 222

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 122/198 (61%), Positives = 149/198 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RE LPLIL LRNRLKYALTY E   I  QR + VDGKVRTD  +PA
Sbjct: 25  GVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRTDMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I +TNE FRLLYD KGR+  H + ++E  FKLCK+     G KG+P+I T+D 
Sbjct: 85  GFMDVIRIDRTNETFRLLYDAKGRYATHRITEQEGNFKLCKIVKKCVGPKGVPFIVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP +K NDTI +D+   K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GS
Sbjct: 145 RTIRYPDPHVKVNDTIMVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGS 204

Query: 227 FETIHIQDALGHEFATRL 244
           F+ +HI+DA GH FATR 
Sbjct: 205 FDIVHIKDAAGHSFATRF 222


>gi|399949930|gb|AFP65586.1| 40S ribosomal protein S4 [Chroomonas mesostigmatica CCMP1168]
          Length = 250

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 124/221 (56%), Positives = 166/221 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP P SGPHK  E  P+IL+LRN+LKYAL  REV+ IL +++V +D K+RT+K YP 
Sbjct: 25  GIWAPSPQSGPHKKMESFPIILILRNKLKYALNNREVLQILKKKNVKIDKKIRTEKNYPT 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+S+ KTNENFRLLYDT GRF LH +  +E+ FKLCK+  +  GQ+GIPYI T+DG
Sbjct: 85  GIMDVISLEKTNENFRLLYDTFGRFVLHRIEQKESFFKLCKIVKLTKGQRGIPYITTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT R+PDP +K NDTI  +L E KI DFIKFDVG++ ++TGG N GR+GI+  +EK+ G 
Sbjct: 145 RTCRFPDPFVKKNDTILFNLSEKKIIDFIKFDVGSLCLITGGNNIGRIGIVMQQEKNSGP 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
            E I ++D+ G EF +++  +F IGKG K ++SLPK KG++
Sbjct: 205 AEMIRLKDSEGFEFFSKMSYIFVIGKGKKSFISLPKEKGLR 245


>gi|82539137|ref|XP_723981.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii 17XNL]
 gi|23478464|gb|EAA15546.1| ribosomal protein S4 X isoform [Plasmodium yoelii yoelii]
          Length = 253

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/235 (54%), Positives = 170/235 (72%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK SSGPHK  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K RTD T+P 
Sbjct: 17  GQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRTDCTFPV 76

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCK++ +   +  +    T+DG
Sbjct: 77  GLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCKIKKIILRKGKLSIAITHDG 136

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R+I Y  P +K NDTI+LDLE  K+ + +KF VGN+VMVT G + GRVG I + +K+ G+
Sbjct: 137 RSIPYIHPEVKVNDTIRLDLESGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSIDKNIGT 196

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           ++ IH++D+ G  FATRL N+F IG  +KP++SLP+ KGIKL IIEE R R  AQ
Sbjct: 197 YDIIHVKDSRGKVFATRLSNIFVIGDNTKPYISLPREKGIKLDIIEERRNRLKAQ 251


>gi|290983375|ref|XP_002674404.1| predicted protein [Naegleria gruberi]
 gi|284087994|gb|EFC41660.1| predicted protein [Naegleria gruberi]
          Length = 274

 Score =  261 bits (668), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 132/231 (57%), Positives = 173/231 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKP  G H +RE LPL+L+LRNRLKYA T +EV  IL QR V VDG VRTDK+YP+
Sbjct: 25  GVYAPKPKPGAHAARESLPLLLLLRNRLKYAATAKEVNVILKQRLVKVDGLVRTDKSYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV+SI KTNE+FRLL+DTKGRF +H + + EA +KLCKV       +G+PYI T DG
Sbjct: 85  GFNDVISIDKTNEHFRLLFDTKGRFVIHPISEREANYKLCKVTKRGTATQGVPYIQTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R IR+PDP IK NDT+K+D+E  K+T  + F+ GN+ MVTGG N+GR+G I NRE H GS
Sbjct: 145 RLIRFPDPSIKVNDTVKVDIETGKVTKSVHFESGNLCMVTGGHNQGRIGEIVNRELHPGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           FE +H++D  G+ F TR  NVF +G+G    ++LPKGKG+KL+++E+ +K+
Sbjct: 205 FEIVHVKDIAGNNFTTRANNVFVLGQGHSSMITLPKGKGLKLNVVEDRKKQ 255


>gi|340505756|gb|EGR32063.1| hypothetical protein IMG5_097290 [Ichthyophthirius multifiliis]
          Length = 260

 Score =  261 bits (667), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 124/233 (53%), Positives = 170/233 (72%), Gaps = 2/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTY 104
           G+   +PS GPHK RE LPL ++L+NRL YAL  R+V  IL   +++V VDGK R D+ +
Sbjct: 25  GIWVTRPSQGPHKLRESLPLFVLLKNRLNYALNGRDVTLILNDKEQNVFVDGKCRRDRGF 84

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDVV+IPKT+ENFR+LYDTKGRF L +L  +EA+FKL KV+    G   +PYI T+
Sbjct: 85  PTGLMDVVNIPKTDENFRVLYDTKGRFVLKTLNKQEAQFKLLKVKGKAIGPNQVPYIVTH 144

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIR+P+P IK  DTIK DL +NKI +    + GNI  V  G N GRVG+I + EKH 
Sbjct: 145 DSRTIRFPNPNIKIGDTIKYDLVKNKILEHTHLESGNICFVQNGNNIGRVGLITHIEKHP 204

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           GSF+ +H++D+ G+ FATR+GN+F IG+G KPW+SLP+G+GI  +++E+ +++
Sbjct: 205 GSFDIVHVKDSKGNSFATRIGNIFVIGQGKKPWISLPEGEGIYETVMEQRQRK 257


>gi|221055832|ref|XP_002259054.1| ribosomal protein s4 [Plasmodium knowlesi strain H]
 gi|193809125|emb|CAQ39827.1| ribosomal protein s4, putative [Plasmodium knowlesi strain H]
          Length = 261

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 175/239 (73%), Gaps = 1/239 (0%)

Query: 44  NSLGLQ-APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           N +G Q APK SSGPH+  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K+RTD 
Sbjct: 21  NKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRTDC 80

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
           T+P G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    
Sbjct: 81  TFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKIILRKGRLSIAV 140

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           T+DGR+I Y  P +K NDT++LDLE  K+ + +KF +G++VMVT G + GRVGII + +K
Sbjct: 141 THDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSIDK 200

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           + G+++ IH++D+ G  FATRL NVF IG  SKP++SLP+ KGIKL IIEE R +  AQ
Sbjct: 201 NIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKAQ 259


>gi|56199522|gb|AAV84250.1| ribosomal protein S4 [Culicoides sonorensis]
          Length = 211

 Score =  260 bits (665), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 121/187 (64%), Positives = 148/187 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS GPH+ RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  +PA
Sbjct: 24  GVFAPRPSQGPHRLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDSNFPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRL+YD KGRF +H +  EEAK+KLCKV+    G K +PY+ T+DG
Sbjct: 84  GFMDVITIEKTNEYFRLIYDVKGRFTVHRISAEEAKYKLCKVKKTCVGPKKVPYLITHDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+PDPLIK NDT++LD+   KITD IKF+ GN+ M+TGGRN GRVG + NREKH GS
Sbjct: 144 RTIRFPDPLIKINDTVQLDIATGKITDTIKFESGNLCMITGGRNLGRVGTVMNREKHPGS 203

Query: 227 FETIHIQ 233
           FE +HIQ
Sbjct: 204 FEIVHIQ 210


>gi|414884904|tpg|DAA60918.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 361

 Score =  260 bits (665), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 135/193 (69%), Positives = 148/193 (76%), Gaps = 10/193 (5%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSG HKS+ECLPLIL++RNRLKYALTYREVI+ILMQ HVLVDGKV TDKTYPA
Sbjct: 164 GAFAPKPSSGSHKSKECLPLILIIRNRLKYALTYREVISILMQHHVLVDGKVTTDKTYPA 223

Query: 107 GFMDVVSIPK----TNENFRLLYDTKGRFRLHS---LRDEEAKFKLCKVRSVQFGQKGIP 159
           GFMD   +      T    R+     G+F   S   +  E      C VRSVQFGQKGIP
Sbjct: 224 GFMDKRELQAASVFTQSGMRM--PRLGQFSYTSSLIVLVEHDDLGSC-VRSVQFGQKGIP 280

Query: 160 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
           Y+NTYD RTI YPDPLIKANDTIK+DLE NKI DFIKFDV N+VMVTG RN GRVG+IKN
Sbjct: 281 YLNTYDDRTILYPDPLIKANDTIKIDLETNKIMDFIKFDVDNVVMVTGKRNTGRVGVIKN 340

Query: 220 REKHKGSFETIHI 232
           REKHKGSFETIH+
Sbjct: 341 REKHKGSFETIHV 353


>gi|156098302|ref|XP_001615183.1| 40S ribosomal protein S4 [Plasmodium vivax Sal-1]
 gi|148804057|gb|EDL45456.1| 40S ribosomal protein S4, putative [Plasmodium vivax]
          Length = 261

 Score =  260 bits (664), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 175/239 (73%), Gaps = 1/239 (0%)

Query: 44  NSLGLQ-APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           N +G Q APK SSGPH+  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K+RTD 
Sbjct: 21  NKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRTDC 80

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
           T+P G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    
Sbjct: 81  TFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKMILRKGRLSIAV 140

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           T+DGR+I Y  P +K NDT++LDLE  K+ + +KF +G++VMVT G + GRVGII + +K
Sbjct: 141 THDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSIDK 200

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           + G+++ IH++D+ G  FATRL NVF IG  SKP++SLP+ KGIKL IIEE R +  AQ
Sbjct: 201 NIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKAQ 259


>gi|389583604|dbj|GAB66338.1| 40S ribosomal protein S4, partial [Plasmodium cynomolgi strain B]
          Length = 260

 Score =  260 bits (664), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 175/239 (73%), Gaps = 1/239 (0%)

Query: 44  NSLGLQ-APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           N +G Q APK SSGPH+  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K+RTD 
Sbjct: 20  NKMGGQYAPKTSSGPHRLIESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKIRTDC 79

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
           T+P G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    
Sbjct: 80  TFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKMILRKGRLSIAV 139

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           T+DGR+I Y  P +K NDT++LDLE  K+ + +KF +G++VMVT G + GRVGII + +K
Sbjct: 140 THDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQIGSMVMVTAGHSVGRVGIISSIDK 199

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           + G+++ IH++D+ G  FATRL NVF IG  SKP++SLP+ KGIKL IIEE R +  AQ
Sbjct: 200 NIGTYDIIHVKDSRGKIFATRLSNVFVIGDNSKPYISLPREKGIKLDIIEERRNKLKAQ 258


>gi|258597201|ref|XP_001347741.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
 gi|254832593|gb|AAN35654.2| 40S ribosomal protein S4, putative [Plasmodium falciparum 3D7]
          Length = 261

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 129/238 (54%), Positives = 173/238 (72%), Gaps = 1/238 (0%)

Query: 44  NSLGLQ-APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           N +G Q APK SSGPHK  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD KVRTD 
Sbjct: 21  NKMGGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKVRTDC 80

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
           T+P G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    
Sbjct: 81  TFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYKLCKVKKILLRKGRLSIAV 140

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           T+DGR+I Y  P +K NDT++LDLE  K+ + +KF VG++VMVT G + GRVG+I + +K
Sbjct: 141 THDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVMVTAGHSVGRVGVISSIDK 200

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAA 280
           + G+++ IH++D+    FATRL NVF IG  +KP++SLP+ KGIKL IIEE R R  A
Sbjct: 201 NMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREKGIKLDIIEERRNRLKA 258


>gi|68073433|ref|XP_678631.1| ribosomal protein S4 [Plasmodium berghei strain ANKA]
 gi|56499160|emb|CAI00409.1| ribosomal protein S4, putative [Plasmodium berghei]
          Length = 260

 Score =  259 bits (663), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 129/235 (54%), Positives = 169/235 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK SSGPHK  E +PL+++LRNRLKYALT+ EV  IL+Q+ V VD K RTD T+P 
Sbjct: 24  GQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVKMILIQKIVKVDNKTRTDCTFPV 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I K+NE FRLLYD KGRF  H + +EE+K+KLCKV+ +   +  +    T+DG
Sbjct: 84  GLMDVIHITKSNEFFRLLYDVKGRFVPHRITNEESKYKLCKVKKIILRKGKLSIAITHDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           R+I Y  P +K NDTI+LDLE  K+ + +KF VGN+VMVT G + GRVG I + +K+ G+
Sbjct: 144 RSIPYIHPEVKVNDTIRLDLETGKVLEHLKFQVGNMVMVTAGHSVGRVGTILSIDKNIGT 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           ++ IH++D+ G  FATRL N+F IG   KP++SLP+ KGIKL IIEE R R  AQ
Sbjct: 204 YDIIHVKDSRGKIFATRLSNIFVIGDALKPYISLPREKGIKLDIIEERRNRLKAQ 258


>gi|319443378|pdb|2XZM|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 1
 gi|319443413|pdb|2XZN|W Chain W, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 2
 gi|315570299|tpg|DAA33968.1| TPA_exp: 40S ribosomal protein rpS4e [Tetrahymena thermophila]
          Length = 260

 Score =  259 bits (662), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 129/234 (55%), Positives = 168/234 (71%), Gaps = 3/234 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTY 104
           G+ A +PS GPHK RE LPL ++L+ RL YAL  R+V  IL   +++V VDGKVR DK Y
Sbjct: 25  GIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGY 84

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDVV I KT+++FR+LYDTKGRF L SL  EEAK+KL KV +   G   IPYI T+
Sbjct: 85  PTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTH 144

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIR+P+P IK  DT+K DL  NKI +F   + GN+  +  G N GRVGII++ EKH+
Sbjct: 145 DSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQ 204

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           GSF+  H++DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE RKR+
Sbjct: 205 GSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEE-RKRK 257


>gi|118376768|ref|XP_001021565.1| Ribosomal family S4e containing protein [Tetrahymena thermophila]
 gi|89303332|gb|EAS01320.1| Ribosomal family S4e containing protein [Tetrahymena thermophila
           SB210]
          Length = 370

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/231 (54%), Positives = 166/231 (71%), Gaps = 2/231 (0%)

Query: 49  QAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAIL--MQRHVLVDGKVRTDKTYPA 106
           QA +PS GPHK RE LPL ++L+ RL YAL  R+V  IL   +++V VDGKVR DK YP 
Sbjct: 137 QATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPT 196

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV I KT+++FR+LYDTKGRF L SL  EEAK+KL KV +   G   IPYI T+D 
Sbjct: 197 GLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDS 256

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P+P IK  DT+K DL  NKI +F   + GN+  +  G N GRVGII++ EKH+GS
Sbjct: 257 RTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQGS 316

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           F+  H++DA G+ FATRLGN+F +G+G K W+ LP G G++ +I+EE +++
Sbjct: 317 FDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETILEERKRK 367


>gi|413948238|gb|AFW80887.1| hypothetical protein ZEAMMB73_153699 [Zea mays]
          Length = 377

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 131/184 (71%), Positives = 145/184 (78%), Gaps = 19/184 (10%)

Query: 49  QAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGF 108
           +APKPSSGPHKSRECLPLIL++RNRLKYA TYREVI+ILMQ HVLVDGK           
Sbjct: 205 KAPKPSSGPHKSRECLPLILIIRNRLKYAPTYREVISILMQHHVLVDGK----------- 253

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           M   S+ +T         T G FRLH +RDE+AKFKL KVRSVQFGQK IPY+NTYD RT
Sbjct: 254 MSFPSLRQTR--------TTGCFRLHPIRDEDAKFKLYKVRSVQFGQKDIPYLNTYDDRT 305

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           IRYPDPLIKANDTIK+DLE NKI DFI FDVGN+VMV G RN GRVG+IK REKHKG+FE
Sbjct: 306 IRYPDPLIKANDTIKIDLETNKIMDFIMFDVGNVVMVIGRRNTGRVGVIKIREKHKGNFE 365

Query: 229 TIHI 232
           TIH+
Sbjct: 366 TIHV 369


>gi|323508791|dbj|BAJ77289.1| cgd7_4760 [Cryptosporidium parvum]
 gi|323510165|dbj|BAJ77976.1| cgd7_4760 [Cryptosporidium parvum]
          Length = 261

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/227 (55%), Positives = 163/227 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK REC+PL ++LRNRLK+ALTY E   I+MQR + VDGKVRTD  +P 
Sbjct: 25  GVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRTDICFPL 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVVSI +  +N R++YDTKGRF    +  +EA FKLCKV  V  G KGIP   T D 
Sbjct: 85  GLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPTATTNDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RY  P +KANDT+K+DL   K+ DF+K +VGN+ MVTGGR++GRVG I + E+  G+
Sbjct: 145 RTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTGGRSQGRVGTITHFERKMGA 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
              + I+D  G  FAT + N+F IG+  KP V+LPK KGI+LS +E+
Sbjct: 205 QCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIRLSNVED 251


>gi|126654348|ref|XP_001388411.1| ribosomal protein S4 [Cryptosporidium parvum Iowa II]
 gi|126117504|gb|EAZ51604.1| ribosomal protein S4, putative [Cryptosporidium parvum Iowa II]
          Length = 260

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/227 (55%), Positives = 163/227 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK REC+PL ++LRNRLK+ALTY E   I+MQR + VDGKVRTD  +P 
Sbjct: 24  GVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRTDICFPL 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVVSI +  +N R++YDTKGRF    +  +EA FKLCKV  V  G KGIP   T D 
Sbjct: 84  GLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPTATTNDA 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RT+RY  P +KANDT+K+DL   K+ DF+K +VGN+ MVTGGR++GRVG I + E+  G+
Sbjct: 144 RTLRYIHPDVKANDTVKVDLATGKVIDFVKCEVGNMCMVTGGRSQGRVGTITHFERKMGA 203

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
              + I+D  G  FAT + N+F IG+  KP V+LPK KGI+LS +E+
Sbjct: 204 QCIVTIRDQKGATFATLMKNIFVIGEEGKPLVTLPKDKGIRLSNVED 250


>gi|253741437|gb|EES98307.1| Ribosomal protein S4 [Giardia intestinalis ATCC 50581]
          Length = 267

 Score =  256 bits (654), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 128/240 (53%), Positives = 169/240 (70%), Gaps = 3/240 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P++GPH  REC+PLIL+LRNRL YA TY E   IL  ++VL+D K R D T+P 
Sbjct: 25  GIWAPRPTNGPHGLRECIPLILILRNRLHYANTYAETNMILKDKNVLIDNKPRIDPTFPI 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV  IPK ++ FR+LYD KGRF L  ++  EA FKLC+V+ +  G KG+PY+ T+D 
Sbjct: 85  GFMDVFEIPKVHKVFRVLYDVKGRFTLIPIQSNEAGFKLCRVQKIFLGDKGMPYLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P P IK NDTIK++L+  KI ++ KFD+G +VMVTGGRN GR+G I+  +KH GS
Sbjct: 145 RTIRFPHPDIKTNDTIKINLKTGKIDEWYKFDIGKVVMVTGGRNCGRIGTIQAIDKHMGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE--EARKRQAAQAAA 284
           +  I ++D+ G EF TRL NVF IG  S P V++P  KGI+  II+  E R R  A+   
Sbjct: 205 YTMIRMKDSEGAEFITRLCNVFIIGNDS-PAVTVPSTKGIRPDIIKNRELRLRSIAKRGG 263


>gi|160550143|gb|ABX44776.1| putative 40S ribosomal protein RPS4 [Flustra foliacea]
          Length = 214

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 148/190 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK RE LP+IL +RNRLKYALTY E   I+MQR + VD KVRTD T+PA
Sbjct: 25  GVFAPRPSSGPHKLRESLPIILFIRNRLKYALTYDEAKKIVMQRLIKVDNKVRTDLTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT+ENFRL+YD KGRF +H +  EEA +KLCKV     G KG+PY+ T+DG
Sbjct: 85  GFMDVISIEKTSENFRLIYDVKGRFAIHRITAEEATYKLCKVAKQCTGPKGVPYVTTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPL+K NDTI+++ +  KI DFIKF+ GN+ M+TGG N GRVG I + EKH GS
Sbjct: 145 RTIRYPDPLVKVNDTIQVNTQTGKIMDFIKFEGGNMCMITGGHNIGRVGQIVHVEKHPGS 204

Query: 227 FETIHIQDAL 236
           F   H++DAL
Sbjct: 205 FHIGHVKDAL 214


>gi|223646542|gb|ACN10029.1| 40S ribosomal protein S4 [Salmo salar]
 gi|223672389|gb|ACN12376.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 213

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 115/183 (62%), Positives = 147/183 (80%)

Query: 102 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 161
           K  PAGFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P++
Sbjct: 30  KVVPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLIGTKGVPHL 89

Query: 162 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
            T+D RTIRYPDPLIK NDT+++DL   KIT+ IKFD GN+ MVTGG N GR+GII NRE
Sbjct: 90  VTHDARTIRYPDPLIKVNDTVRIDLATGKITEHIKFDTGNLCMVTGGANLGRIGIITNRE 149

Query: 222 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +H GSF+ +H++D+ G+ FATRLGN+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+
Sbjct: 150 RHPGSFDVVHVKDSAGNIFATRLGNIFIIGKGNKPWVSLPRGKGIRLTIAEERDKRIAAK 209

Query: 282 AAA 284
           A +
Sbjct: 210 AGS 212


>gi|431891055|gb|ELK01933.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 452

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/223 (54%), Positives = 156/223 (69%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+  P  S+ PHK R  LPLI+  RNRLKYA T  EV  I +Q+ + +D KV TD TYPA
Sbjct: 25  GVFPPCSSTSPHKLRGYLPLIIFSRNRLKYAKTGDEVKKICIQQFIKIDSKVWTDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT EN  L+YD +G F +H +  E+AK+KLCK+R      KGIP++  +D 
Sbjct: 85  GFMDVISIDKTRENLCLIYDIRGHFPIHQITPEKAKYKLCKMRKTFVSTKGIPHLVIHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            T+ YPDPLIK N TI++DL+  KITDFIKFD GN+ MVT G N GR+G+I NRE H GS
Sbjct: 145 CTMCYPDPLIKVNGTIRIDLQTGKITDFIKFDTGNLCMVTVGDNLGRIGVITNRESHSGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLS 269
           F+ ++++DA G  FATRL N+  IGK +KPW+SLP     K++
Sbjct: 205 FDVVNVKDANGDSFATRLSNICIIGKDNKPWLSLPGAHNGKVA 247


>gi|302505080|ref|XP_003014761.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
 gi|302664454|ref|XP_003023857.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
 gi|291178067|gb|EFE33858.1| hypothetical protein ARB_07322 [Arthroderma benhamiae CBS 112371]
 gi|291187875|gb|EFE43239.1| hypothetical protein TRV_02053 [Trichophyton verrucosum HKI 0517]
 gi|307752099|gb|ADN93070.1| putative 40S ribosomal subunit protein S4 [Arthroderma benhamiae]
          Length = 215

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 123/213 (57%), Positives = 153/213 (71%), Gaps = 22/213 (10%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR V VDGKVRTD TYPAGFMDV++I KT ENFRL+YDTKGRF +H ++ EEA++KL K
Sbjct: 1   MQRLVKVDGKVRTDSTYPAGFMDVITIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRT---------------------IRYPDPLIKANDTIKLDL 186
           V+ VQ G+ GIP++ T+D RT                     IRYPDP I+ NDT+K+D+
Sbjct: 61  VKRVQLGKGGIPFLVTHDARTRWTKVWFDSRRAWSERRWQLNIRYPDPSIRVNDTVKIDI 120

Query: 187 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGN 246
              KITDF+KFD G I M TGGRN GRVG+I +RE+H G F  +HI+DA+ + FATR  N
Sbjct: 121 ATGKITDFVKFDTGVIAMATGGRNMGRVGVITHRERHDGGFGIVHIKDAIDNTFATRESN 180

Query: 247 VFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           VF IG+  KPWVSLPKGKG+KL+I EE  +R+A
Sbjct: 181 VFVIGQ-EKPWVSLPKGKGVKLTIAEERDRRRA 212


>gi|118573853|sp|P0C233.1|RS4_TETTH RecName: Full=40S ribosomal protein S4; AltName: Full=40S ribosomal
           protein S7
 gi|1096035|prf||2110340A ribosomal protein S7
          Length = 259

 Score =  250 bits (639), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 124/233 (53%), Positives = 165/233 (70%), Gaps = 2/233 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G+ A +PS GPHK RE LPL ++L+ RL YAL  R+V  IL  +  +V VD KVR DK Y
Sbjct: 24  GIWATRPSQGPHKLRESLPLSVLLKERLNYALNGRDVTLILNDKEGNVFVDQKVRRDKGY 83

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDVV I KT+++FR+LYDTKGRF L SL  EEAK+KL KV +   G   IPYI T+
Sbjct: 84  PTGLMDVVRIEKTDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTH 143

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIR+P+P IK  DT+K DL  NKI +F   + GN+  +  G N GRVGII++ EKH+
Sbjct: 144 DSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNIGRVGIIQHIEKHQ 203

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 277
           GSF+  H++DA G+ FATRLGN+F +G+G K ++ LP G G++ +I+EE +++
Sbjct: 204 GSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELPSGDGVRETILEERKRK 256


>gi|326918854|ref|XP_003205701.1| PREDICTED: 40S ribosomal protein S4-like [Meleagris gallopavo]
          Length = 182

 Score =  250 bits (638), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 114/175 (65%), Positives = 144/175 (82%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 7   DVISIEKTGEHFRLVYDTKGRFAVHRITAEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 66

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 67  RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 126

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  KR AA+ ++
Sbjct: 127 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSS 181


>gi|330038406|ref|XP_003239588.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
 gi|327206512|gb|AEA38690.1| 40S ribosomal protein S4 [Cryptomonas paramecium]
          Length = 242

 Score =  250 bits (638), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 119/216 (55%), Positives = 159/216 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APK  SGPHK     PL L+LRN+LKYA+  REVI IL Q+ + VDGKVRT K YP 
Sbjct: 25  GIFAPKIKSGPHKKENSYPLSLILRNKLKYAVNTREVIQILSQKMIYVDGKVRTQKNYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MD++SI KT E FRLLYD+ G F LH +   E+  K+CKV SV+ G  GIPYI T+DG
Sbjct: 85  GIMDIISIKKTKEIFRLLYDSIGSFTLHRIGKNESSIKICKVISVKIGNMGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+IK+ND++  ++ + KI DFIKFD+G++ +VTGG N G+VGII  +EK+  +
Sbjct: 145 RTIRYPDPVIKSNDSVIFNIFKKKIIDFIKFDIGSLCIVTGGYNTGKVGIIYYKEKYYNN 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
            E I++++   ++F T++ NVF IGKG+K ++SLPK
Sbjct: 205 QEMIYLKNFEENQFFTKISNVFIIGKGNKSFISLPK 240


>gi|145495133|ref|XP_001433560.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400678|emb|CAK66163.1| unnamed protein product [Paramecium tetraurelia]
          Length = 258

 Score =  249 bits (636), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 120/234 (51%), Positives = 167/234 (71%), Gaps = 2/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+ +LKYAL  REV  IL  +  +V VDGKVR+D  Y
Sbjct: 17  GNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADKDGNVKVDGKVRSDFGY 76

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G +DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV   + G   +PYI T 
Sbjct: 77  PVGLLDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNVPYIVTN 136

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYP+P I  NDT+K+DLE  K+ DFIK + GNI  + GG N GRVG+I++RE+H 
Sbjct: 137 DARTIRYPNPEIHINDTLKIDLETGKVVDFIKEEPGNICYIVGGNNIGRVGLIQHRERHL 196

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           GSF+ +H++D+ G  F+TR+ N+FTIGKG KP +SLP   G+ L+ +E+ + R+
Sbjct: 197 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKPLISLPDDNGLYLTALEKKQARE 250


>gi|47197900|emb|CAF89133.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 176

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 142/175 (81%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D RTI
Sbjct: 1   DVISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTI 60

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 61  RYPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDV 120

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +H++D  G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ A+
Sbjct: 121 VHVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 175


>gi|320097679|gb|ADW09574.1| putative 40S ribosomal protein S4-like protein [Schiedea
           stellarioides]
          Length = 132

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/132 (87%), Positives = 126/132 (95%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+  KI DF+KFDVGN+
Sbjct: 1   YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61  VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGSRPWVSLPK 120

Query: 263 GKGIKLSIIEEA 274
           GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132


>gi|320097677|gb|ADW09573.1| putative 40S ribosomal protein S4-like protein [Schiedea
           stellarioides]
          Length = 132

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 115/132 (87%), Positives = 126/132 (95%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+  KI DF+KFDVGN+
Sbjct: 1   YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKGS+PWVSLPK
Sbjct: 61  VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDATGHEFATRQGNVFIVGKGSRPWVSLPK 120

Query: 263 GKGIKLSIIEEA 274
           GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132


>gi|145528524|ref|XP_001450056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417656|emb|CAK82659.1| unnamed protein product [Paramecium tetraurelia]
          Length = 816

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 119/234 (50%), Positives = 165/234 (70%), Gaps = 2/234 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+ +LKYAL  REV  IL  +  ++ VDGKVR+D  Y
Sbjct: 575 GNWTTRPSQGPHKLRESIPLSVILQQKLKYALYAREVQMILADKDGNIKVDGKVRSDFGY 634

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV   + G   +PYI T 
Sbjct: 635 PVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNVPYIVTN 694

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYP+P I  NDT+K+DLE  KI DFIK + GNI  + GG N GRVG+I++RE+H 
Sbjct: 695 DSRTIRYPNPEIHVNDTLKIDLETGKIVDFIKEEPGNICYIIGGNNIGRVGLIQHRERHL 754

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           GSF+ +H++D+ G  F+TR+ N+FTIGKG K  +SLP   G+ L+ +E+ + R+
Sbjct: 755 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQARE 808


>gi|302172089|gb|ADK97882.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172095|gb|ADK97885.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172097|gb|ADK97886.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172099|gb|ADK97887.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172101|gb|ADK97888.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172103|gb|ADK97889.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172111|gb|ADK97893.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172113|gb|ADK97894.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172115|gb|ADK97895.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172121|gb|ADK97898.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097681|gb|ADW09575.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
 gi|320097683|gb|ADW09576.1| putative 40S ribosomal protein S4-like protein [Schiedea adamantis]
 gi|320097685|gb|ADW09577.1| putative 40S ribosomal protein S4-like protein [Schiedea
           membranacea]
 gi|320097687|gb|ADW09578.1| putative 40S ribosomal protein S4-like protein [Schiedea
           membranacea]
 gi|320097689|gb|ADW09579.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097693|gb|ADW09581.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097697|gb|ADW09583.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097701|gb|ADW09585.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097705|gb|ADW09587.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097707|gb|ADW09588.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097717|gb|ADW09593.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097719|gb|ADW09594.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097721|gb|ADW09595.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097723|gb|ADW09596.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097725|gb|ADW09597.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097727|gb|ADW09598.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097729|gb|ADW09599.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097731|gb|ADW09600.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097733|gb|ADW09601.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097735|gb|ADW09602.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097737|gb|ADW09603.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097739|gb|ADW09604.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097741|gb|ADW09605.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097743|gb|ADW09606.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097745|gb|ADW09607.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097747|gb|ADW09608.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097749|gb|ADW09609.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097751|gb|ADW09610.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097753|gb|ADW09611.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097757|gb|ADW09613.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097761|gb|ADW09615.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097781|gb|ADW09625.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
          Length = 132

 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 126/132 (95%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L+  KI DF+KFDVGN+
Sbjct: 1   YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLDTQKIEDFVKFDVGNV 60

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61  VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120

Query: 263 GKGIKLSIIEEA 274
           GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132


>gi|403356345|gb|EJY77764.1| 40S ribosomal protein S4 [Oxytricha trifallax]
          Length = 264

 Score =  247 bits (631), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 118/238 (49%), Positives = 168/238 (70%), Gaps = 2/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLV--DGKVRTDKTY 104
           G+ A +  +GPHK RE +PL ++LRNRL+YA++ +E I I+  +  L+  DGK+R D  +
Sbjct: 25  GVYATRAGTGPHKRRESMPLSVLLRNRLRYAISRQEAIKIVKDKEGLIKIDGKIRRDPRF 84

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDVV+I +T E+FR+LYD KGR++ H +  +EA+FKLC +R    G   +PY+ T+
Sbjct: 85  PLGIMDVVTIDRTGEHFRILYDVKGRYQAHKIDAKEAQFKLCSIRRKAMGPNKVPYVITH 144

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DGRT+R+P P IK +DT+KL+LE N++   IKF+ G  V++ GG N GRVG++++ EKH 
Sbjct: 145 DGRTLRFPHPDIKKHDTVKLNLETNEVESLIKFENGAQVLLVGGNNIGRVGVLQHIEKHP 204

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
            SF+  HI+DA GH FATR+ NVF IG+G K  +SL   KGIKLS+I+E  KR   +A
Sbjct: 205 SSFDIAHIKDAAGHSFATRVNNVFVIGEGKKSVISLLPAKGIKLSLIDERNKRLRIEA 262


>gi|300121745|emb|CBK22320.2| unnamed protein product [Blastocystis hominis]
 gi|300124038|emb|CBK25309.2| unnamed protein product [Blastocystis hominis]
 gi|300175830|emb|CBK21826.2| unnamed protein product [Blastocystis hominis]
          Length = 194

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 113/191 (59%), Positives = 149/191 (78%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR V VDGK+RTD T+PAGFMDVV++  +++ FRLLYD KGRF LH + + EA++KLCK
Sbjct: 1   MQRLVKVDGKIRTDSTFPAGFMDVVTLEGSSDRFRLLYDVKGRFVLHRIDENEAQYKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V   Q   K IP+I T+D RTIR+PDP +K NDT+K+DL+ NK+   +KF+VGN+  +T 
Sbjct: 61  VVKRQLSSKKIPFIVTHDARTIRFPDPTVKVNDTVKVDLKTNKVIGHVKFEVGNLCFITK 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           G N GRVG+I +R++H GSF+ +H++DA GHEFATRL NVF IG+G++P VSLPKG G+K
Sbjct: 121 GHNIGRVGVIVHRDRHFGSFDIVHVRDAAGHEFATRLSNVFIIGEGNQPMVSLPKGNGVK 180

Query: 268 LSIIEEARKRQ 278
           LSIIEE   R+
Sbjct: 181 LSIIEEKEMRE 191


>gi|47196669|emb|CAF89132.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 175

 Score =  247 bits (630), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 111/174 (63%), Positives = 141/174 (81%)

Query: 111 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 170
           V+SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D RTIR
Sbjct: 1   VISIDKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIR 60

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
           YPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +
Sbjct: 61  YPDPLIKVNDTVRIDLESGKITDFIKFDTGNMCMVTGGANLGRIGVITNRERHPGSFDVV 120

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           H++D  G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+ A+
Sbjct: 121 HVKDTTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQAS 174


>gi|302172081|gb|ADK97878.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172083|gb|ADK97879.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172085|gb|ADK97880.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172087|gb|ADK97881.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172105|gb|ADK97890.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172107|gb|ADK97891.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172109|gb|ADK97892.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172127|gb|ADK97901.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172129|gb|ADK97902.1| 40S ribosomal protein S4-like protein [Schiedea adamantis]
          Length = 132

 Score =  247 bits (630), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 125/132 (94%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L   KI DF+KFDVGN+
Sbjct: 1   YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLXTQKIEDFVKFDVGNV 60

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61  VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120

Query: 263 GKGIKLSIIEEA 274
           GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132


>gi|302172091|gb|ADK97883.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172093|gb|ADK97884.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172117|gb|ADK97896.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172119|gb|ADK97897.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172123|gb|ADK97899.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|302172125|gb|ADK97900.1| 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097691|gb|ADW09580.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097695|gb|ADW09582.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097699|gb|ADW09584.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097703|gb|ADW09586.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097709|gb|ADW09589.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097711|gb|ADW09590.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097713|gb|ADW09591.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097715|gb|ADW09592.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097755|gb|ADW09612.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097759|gb|ADW09614.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097763|gb|ADW09616.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097765|gb|ADW09617.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097767|gb|ADW09618.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097769|gb|ADW09619.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097771|gb|ADW09620.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097773|gb|ADW09621.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097775|gb|ADW09622.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097777|gb|ADW09623.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097779|gb|ADW09624.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
 gi|320097783|gb|ADW09626.1| putative 40S ribosomal protein S4-like protein [Schiedea globosa]
          Length = 132

 Score =  246 bits (629), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 125/132 (94%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIKL+L   KI DF+KFDVGN+
Sbjct: 1   YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLNLYTQKIEDFVKFDVGNV 60

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           VMVTGGRNRGRVG+IKNREKHKGSFETIHI+DA GHEFATR GNVF +GKG++PWVSLPK
Sbjct: 61  VMVTGGRNRGRVGVIKNREKHKGSFETIHIEDAAGHEFATRQGNVFIVGKGTRPWVSLPK 120

Query: 263 GKGIKLSIIEEA 274
           GKGIKL+IIEEA
Sbjct: 121 GKGIKLTIIEEA 132


>gi|323332828|gb|EGA74232.1| Rps4ap [Saccharomyces cerevisiae AWRI796]
          Length = 203

 Score =  246 bits (628), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 134/163 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPLI+ LRNRLKYAL  REV AILMQRHV VDGKVRTD TYPA
Sbjct: 41  GCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTYPA 100

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DG
Sbjct: 101 GFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDG 160

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 209
           RTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTGGR
Sbjct: 161 RTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGR 203


>gi|444515837|gb|ELV10992.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 376

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 109/161 (67%), Positives = 135/161 (83%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D RTI
Sbjct: 173 DVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI 232

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 233 RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDV 292

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSI 270
           +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I
Sbjct: 293 VHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 333


>gi|145499397|ref|XP_001435684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402818|emb|CAK68287.1| unnamed protein product [Paramecium tetraurelia]
          Length = 289

 Score =  244 bits (623), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/239 (48%), Positives = 167/239 (69%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+++LKYAL  REV  IL  +  ++ VDGKVR+D  Y
Sbjct: 48  GNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQTILADKDGNIKVDGKVRSDFGY 107

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV   + G   +PYI T 
Sbjct: 108 PVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNVPYIVTS 167

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYP+P I  NDT+K+DLE  K+ DF+K + GN+  + GG N GRVG+I++RE+H 
Sbjct: 168 DARTIRYPNPDIHVNDTLKIDLETGKVVDFLKEEPGNLCYIIGGNNIGRVGLIQHRERHL 227

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           GSF+ +H++D+ G  F+TR+ N+FTIGKG K  +SLP   G+ L+ +E+ + R+  +  
Sbjct: 228 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQAREHQEET 286


>gi|344244607|gb|EGW00711.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 187

 Score =  244 bits (623), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/177 (66%), Positives = 139/177 (78%), Gaps = 4/177 (2%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT + FRL+YDTKG F +H +  EEAK+K CKVR +  G KGIPY+ ++D 
Sbjct: 67  GFMDVISIDKTGQKFRLIYDTKGHFAVHRITPEEAKYKWCKVRKIFVGTKGIPYLVSHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           RTIRYPDPLIK NDTI++DLE    T  IKFD GN+ MVTGG N GR+G+I NRE+H
Sbjct: 127 RTIRYPDPLIKVNDTIQIDLE----TGAIKFDTGNLCMVTGGANLGRIGVITNRERH 179


>gi|145500014|ref|XP_001435991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403128|emb|CAK68594.1| unnamed protein product [Paramecium tetraurelia]
          Length = 258

 Score =  244 bits (622), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 117/239 (48%), Positives = 168/239 (70%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+++LKYAL  REV  IL  +  ++ VDGKVR+D  Y
Sbjct: 17  GNWTTRPSQGPHKLRESIPLSVILQHKLKYALYAREVQMILADKDGNIKVDGKVRSDFGY 76

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV++I KT E++R+LYD +G+F L S++ +EAKFKL KV   + G   +PYI T 
Sbjct: 77  PVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPDEAKFKLVKVTQKKVGPNNVPYIVTN 136

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DGRTIRYP+P I  NDT+K++LE  KI DF+K + GN+  + GG N GRVG+I++RE+H 
Sbjct: 137 DGRTIRYPNPEIHVNDTLKIELETGKIVDFLKEEPGNLCYIIGGNNIGRVGLIQHRERHL 196

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           GSF+ +H++D+ G  F+TR+ N+FTIGKG K  +SLP   G+ L+ +E+ + R+  +  
Sbjct: 197 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQAREHQEET 255


>gi|145488765|ref|XP_001430386.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397483|emb|CAK62988.1| unnamed protein product [Paramecium tetraurelia]
          Length = 290

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/239 (48%), Positives = 165/239 (69%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+++LKYAL  RE   IL  +  ++ VDGKVRTD  Y
Sbjct: 50  GNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARESTMILADKDGNIKVDGKVRTDSGY 109

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV++I KT E++R+LYD +G+F L S++ EEAKFKL KV   + G   +PYI T 
Sbjct: 110 PVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQKKVGPNNVPYIVTN 169

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYP+P I  NDT+K+DLE  K+ +F+K + GN+  + GG N GRVG+I++RE+H 
Sbjct: 170 DARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNNIGRVGLIQHRERHL 229

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           GSF+ +H++D+ G  F+TR+ N+FTIGKG K  +SLP   G+ L+ +E+ + +   +  
Sbjct: 230 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALEKKQAKDHQEVG 288


>gi|145475847|ref|XP_001423946.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391008|emb|CAK56548.1| unnamed protein product [Paramecium tetraurelia]
          Length = 292

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 118/235 (50%), Positives = 165/235 (70%), Gaps = 5/235 (2%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQR--HVLVDGKVRTDKTY 104
           G    +PS GPHK RE +PL ++L+++LKYAL  RE   IL  +  ++ VDGKVRTD  Y
Sbjct: 52  GNWTTRPSQGPHKLRESIPLSVILQHKLKYALYARESTMILADKDGNIKVDGKVRTDSGY 111

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV++I KT E++R+LYD +G+F L S++ EEAKFKL KV   + G   +PYI T 
Sbjct: 112 PVGLQDVITIDKTRESYRVLYDVQGKFILKSIKPEEAKFKLVKVTQKKVGPNNVPYIVTN 171

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           D RTIRYP+P I  NDT+K+DLE  K+ +F+K + GN+  + GG N GRVG+I++RE+H 
Sbjct: 172 DARTIRYPNPDIHVNDTLKIDLESGKVVEFLKEEPGNLCYIIGGNNIGRVGLIQHRERHL 231

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQA 279
           GSF+ +H++D+ G  F+TR+ N+FTIGKG K  +SLP   G+ L+ +E   K+QA
Sbjct: 232 GSFDIVHVKDSNGKHFSTRINNIFTIGKGKKSLISLPDDNGLYLTALE---KKQA 283


>gi|170574390|ref|XP_001892793.1| 40S ribosomal protein S4 [Brugia malayi]
 gi|158601467|gb|EDP38373.1| 40S ribosomal protein S4, putative [Brugia malayi]
          Length = 201

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 117/200 (58%), Positives = 147/200 (73%), Gaps = 1/200 (0%)

Query: 86  ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 145
           I  QR + VDGKVRTD  +PAGFMDV+ I KTNE FRLLYD KGR+  H + ++E   KL
Sbjct: 2   ICKQRLIKVDGKVRTDMRFPAGFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKL 61

Query: 146 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 205
           CK+     G KG+P+I T+D RTIRYPDP +K NDTI +D+   K++D++KFD GN+ MV
Sbjct: 62  CKIVKKCVGPKGVPFIVTHDARTIRYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMV 121

Query: 206 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGK 264
           TGGRN GRVGI+ +REKH GSF+ +HI+DA  H FATRL NVF IGKG+K  VSLP   K
Sbjct: 122 TGGRNMGRVGIVGHREKHPGSFDIVHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTK 181

Query: 265 GIKLSIIEEARKRQAAQAAA 284
           G++L+I EE  +R A + AA
Sbjct: 182 GVRLTIAEERDRRLAQKRAA 201


>gi|123477532|ref|XP_001321933.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|121904769|gb|EAY09710.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
          Length = 269

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 114/228 (50%), Positives = 159/228 (69%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G  A  PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT+  Y
Sbjct: 37  SAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRY 96

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDV+ + K+NE FR++YD KGRF +H +  +EA FKL +V   + G KGIP++ T+
Sbjct: 97  PTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTH 156

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DGRTI Y DP ++ +D +K +++  ++   IKF VG++ MVT G N GRVG I+  EK  
Sbjct: 157 DGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQM 216

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
            SF+ +H++D  G  FATR+ NVF IG+   P +SLP  +G++ SI+E
Sbjct: 217 ASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 264


>gi|222088017|gb|ACM41869.1| 40S ribosomal protein S4 [Epinephelus coioides]
          Length = 173

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/172 (63%), Positives = 139/172 (80%)

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           SI KT E+FRL+YD KGRF +H +  EEAK+KLCKV+ +  G KGIP++ T+D RTIRYP
Sbjct: 1   SIEKTGEHFRLIYDVKGRFTVHRITAEEAKYKLCKVKKIIIGTKGIPHLVTHDARTIRYP 60

Query: 173 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H+
Sbjct: 61  DPLIKVNDTIRIDLDTGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV 120

Query: 233 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           +D+ G+ FATRL N+F IGKG+KPWVSLP+GKGI+L+I EE  KR AA+  +
Sbjct: 121 KDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTIAEERDKRLAAKQGS 172


>gi|123376214|ref|XP_001297934.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|123468788|ref|XP_001317610.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|154417078|ref|XP_001581560.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|154420837|ref|XP_001583433.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|121878306|gb|EAX85004.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
 gi|121900348|gb|EAY05387.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
 gi|121915788|gb|EAY20574.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
 gi|121917674|gb|EAY22447.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
          Length = 255

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 114/228 (50%), Positives = 159/228 (69%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G  A  PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT+  Y
Sbjct: 23  SAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRY 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDV+ + K+NE FR++YD KGRF +H +  +EA FKL +V   + G KGIP++ T+
Sbjct: 83  PTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTH 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DGRTI Y DP ++ +D +K +++  ++   IKF VG++ MVT G N GRVG I+  EK  
Sbjct: 143 DGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQM 202

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
            SF+ +H++D  G  FATR+ NVF IG+   P +SLP  +G++ SI+E
Sbjct: 203 ASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 250


>gi|123439290|ref|XP_001310418.1| 40S ribosomal protein S4-C [Trichomonas vaginalis G3]
 gi|121892187|gb|EAX97488.1| 40S ribosomal protein S4-C, putative [Trichomonas vaginalis G3]
          Length = 255

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 114/228 (50%), Positives = 159/228 (69%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G  A  PS+GPHK RECLP+ + LR+RLKYALT +E +AI+ +R V VDGKVRT+  Y
Sbjct: 23  SAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIVKRRLVKVDGKVRTNYRY 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G MDV+ + K+NE FR++YD KGRF +H +  +EA FKL +V   + G KGIP++ T+
Sbjct: 83  PTGLMDVIGLGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLRVNQFKIGAKGIPHVVTH 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DGRTI Y DP ++ +D +K +++  ++   IKF VG++ MVT G N GRVG I+  EK  
Sbjct: 143 DGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGRVGTIQKIEKQM 202

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
            SF+ +H++D  G  FATR+ NVF IG+   P +SLP  +G++ SI+E
Sbjct: 203 ASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 250


>gi|183233913|ref|XP_001913934.1| 40S ribosomal protein S4 [Entamoeba histolytica HM-1:IMSS]
 gi|169801348|gb|EDS89291.1| 40S ribosomal protein S4, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|449701849|gb|EMD42590.1| 40S ribosomal protein S4 [Entamoeba histolytica KU27]
          Length = 197

 Score =  239 bits (609), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 115/184 (62%), Positives = 135/184 (73%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 7   GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AKFKLCK+     G   IPYI T+DG
Sbjct: 67  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCKIEKRVLGTGAIPYIVTHDG 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYP P ++ANDTIKL+LE  KI DF+KFD+GN  M+ GG   GRVG+I  RE H GS
Sbjct: 127 RTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGRVGVIVKREVHPGS 186

Query: 227 FETI 230
           FE I
Sbjct: 187 FEII 190


>gi|397518940|ref|XP_003829632.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
           1-like [Pan paniscus]
          Length = 270

 Score =  238 bits (606), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/229 (53%), Positives = 153/229 (66%), Gaps = 2/229 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  +V  I MQ  + +DGKVR   TYPA
Sbjct: 25  GIFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDDVKEIRMQCFIKIDGKVRVAITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF DV+ I KT E+F L+ D KG   +  +  EEAK+ LCKVR V  G KGI  + T+D 
Sbjct: 85  GFTDVIGI-KTGEHFCLVCDXKGCSAVDRVTVEEAKYNLCKVRKVTMGMKGIQRLVTHDT 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            TI YPDP+IK N+T++ DL   KI +F KF  GN  MV GG +   VG+  NRE H GS
Sbjct: 144 GTIHYPDPVIKVNNTVQTDLGTGKIINFSKFHTGNACMVIGGASLRHVGVT-NREGHPGS 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 275
               H++DA G+ FA RL N+F    GSKPW+SLP+GKG +L+   E R
Sbjct: 203 LNVGHVRDANGNSFALRLSNIFVTANGSKPWISLPRGKGTRLAEKREKR 251


>gi|162606302|ref|XP_001713181.1| 40S ribosomal protein S4 [Guillardia theta]
 gi|4583659|emb|CAB40397.1| 40S ribosomal protein S4 [Guillardia theta]
          Length = 257

 Score =  237 bits (605), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 112/221 (50%), Positives = 157/221 (71%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+ SSGPHK +  +PL++V+RN+LKY+   RE + IL +  + VDGKVR DK +PA
Sbjct: 25  GIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNILKKNEIYVDGKVRADKNFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI  T EN+R+LYD  G F LH +  +E+ FKLCKV  V  G KGIPYI T+DG
Sbjct: 85  GVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCKVIRVSIGSKGIPYIVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIR+P+ LIK+ND+I LDL  NK+ DFIKF +G++ +V  G N GR+G+  N    +GS
Sbjct: 145 RTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGSNIGRIGVFINTIGGQGS 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
              + ++D  G  F+T+  N+F IGKG+K ++SLP+ +G++
Sbjct: 205 DSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLR 245


>gi|71755051|ref|XP_828440.1| 40s ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|71755053|ref|XP_828441.1| 40S ribosomal protein S4 [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|449802195|pdb|3ZEY|1 Chain 1, High-resolution Cryo-electron Microscopy Structure Of The
           Trypanosoma Brucei Ribosome
 gi|70833826|gb|EAN79328.1| 40s ribosomal protein S4, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|70833827|gb|EAN79329.1| 40S ribosomal protein S4, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 273

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/244 (50%), Positives = 160/244 (65%), Gaps = 8/244 (3%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL L++++RNRLKYAL   E   IL Q  V VDGK R D  YPA
Sbjct: 22  GVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMILRQGLVCVDGKPRKDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FR+LYD KGRF L  + + E+  K+ KV +V  G   IP   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNVYTGTGRIPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  D++E K+ D IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANRGRIGEIVSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE-------ARKRQ 278
           F+   ++DA GHEFATR  N+F IGK  S   V+LPK +G+++++I+E       A  R+
Sbjct: 202 FDIARLKDASGHEFATRATNIFVIGKDMSSVPVTLPKQQGLRINVIQEREEKLIAAETRR 261

Query: 279 AAQA 282
             QA
Sbjct: 262 TTQA 265


>gi|413944948|gb|AFW77597.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 271

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/190 (65%), Positives = 136/190 (71%), Gaps = 35/190 (18%)

Query: 44  NSLGLQ-APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDK 102
           N LG   APKPSSGPHKSRECLPLIL++RNRLKYALTYRE                    
Sbjct: 108 NKLGRAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE-------------------- 147

Query: 103 TYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYIN 162
                 M   S+ +T         T G FRLH +RDE+AKF LCKV SVQFGQKGIPY+N
Sbjct: 148 ------MSFPSLRQTR--------TIGCFRLHPIRDEDAKFMLCKVGSVQFGQKGIPYLN 193

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           TY  RTIRYPDPLIKANDT K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREK
Sbjct: 194 TYGDRTIRYPDPLIKANDTNKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREK 253

Query: 223 HKGSFETIHI 232
           HKG+FETIH+
Sbjct: 254 HKGNFETIHV 263


>gi|323304664|gb|EGA58427.1| Rps4bp [Saccharomyces cerevisiae FostersB]
          Length = 167

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 108/165 (65%), Positives = 133/165 (80%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQRHV VDGKVRTD TYPAGFMDV+++  TNENFRL+YD KGRF +H + DEEA +KL K
Sbjct: 1   MQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL   KITDFIKFD G +V VTG
Sbjct: 61  VKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGK 252
           GRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+
Sbjct: 121 GRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGE 165


>gi|321448588|gb|EFX61505.1| hypothetical protein DAPPUDRAFT_304892 [Daphnia pulex]
          Length = 176

 Score =  236 bits (603), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 138/178 (77%), Gaps = 3/178 (1%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR + VDG+VRTD  YPAGFMDV++I  T E FRL+Y+ KG F +H +    A++KLCK
Sbjct: 1   MQRLIKVDGEVRTDSNYPAGFMDVITIDNTGEYFRLVYNVKGCFAIHRI---TAEYKLCK 57

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR VQ G KGIP+I T+DGRTIRYPDPL+K NDTI+LD+  NKI DFIKFD GN+ M+ G
Sbjct: 58  VRRVQVGPKGIPFITTHDGRTIRYPDPLVKVNDTIQLDIATNKIMDFIKFDSGNLWMIIG 117

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 265
           G N GRVG   NRE++ GSF+  H++DALGH FATRL NVF IGKGSK ++SLP+ KG
Sbjct: 118 GCNLGRVGTTINRERYPGSFDIAHVKDALGHLFATRLNNVFIIGKGSKAYISLPRDKG 175


>gi|261334297|emb|CBH17291.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
           DAL972]
 gi|261334298|emb|CBH17292.1| 40S ribosomal protein S4, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 273

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/244 (50%), Positives = 159/244 (65%), Gaps = 8/244 (3%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL L++++RNRLKYAL   E   IL Q  V VDGK R D  YPA
Sbjct: 22  GVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNALEAQMILRQGLVCVDGKPRKDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FR+LYD KGRF L  + + E+  K+ KV +V  G   IP   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRILYDVKGRFALVRVSEAESSIKMMKVVNVYTGTGRIPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  D++E K+ D IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTSRGDTLVYDVKEKKVLDLIKIGNGKVVMVTGGANRGRIGEIVSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE-------ARKRQ 278
           F+   ++DA GHEFATR  N+F IG   S   V+LPK +G+++++I+E       A  R+
Sbjct: 202 FDIARLKDASGHEFATRATNIFVIGNDMSSVPVTLPKQQGLRINVIQEREEKLIAAETRR 261

Query: 279 AAQA 282
             QA
Sbjct: 262 TTQA 265


>gi|343473038|emb|CCD14963.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 307

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/235 (51%), Positives = 155/235 (65%), Gaps = 1/235 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL L++++RNRLKYAL   E   IL Q  V VDGK R D  YPA
Sbjct: 56  GVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMILRQGLVCVDGKPRKDGKYPA 115

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FR+LYD KGRF L  + + EA  K+ KV +V  G   IP   T+DG
Sbjct: 116 GFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKVVNVYTGTGRIPVAVTHDG 175

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  D++  K+TD IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 176 HRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGGANRGRIGEIVSIERHPGA 235

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAA 280
           F+   ++DA GHEFATR  N+F IGK  S   V+LPK  G++ ++I E  ++  A
Sbjct: 236 FDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLRKNVIVEREEKLIA 290


>gi|340058530|emb|CCC52888.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
          Length = 273

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/239 (49%), Positives = 162/239 (67%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL LI+++RNRLKYAL  RE   IL Q  V VDGK R D  YPA
Sbjct: 22  GVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMILRQGFVHVDGKPRKDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IP+T + FR+LYD KGRF L  + + EA  K+ KV +V  G   +P   T+DG
Sbjct: 82  GFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKVINVYTGTGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP  +  DT+  D+++ K  D I+   G +V+VTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGKGRVVLVTGGANRGRIGEIVSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+   ++DA GHEFATR  N+F IGK  K   ++LPK +G+++++I+E R+ +  +A A
Sbjct: 202 FDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLRINVIQE-REEKLIEAEA 259


>gi|340058531|emb|CCC52889.1| putative 40S ribosomal protein S4 [Trypanosoma vivax Y486]
          Length = 273

 Score =  234 bits (597), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/239 (49%), Positives = 162/239 (67%), Gaps = 2/239 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL LI+++RNRLKYAL  RE   IL Q  V VDGK R D  YPA
Sbjct: 22  GVFAPRPRAGPHKLRECLSLIIIIRNRLKYALNAREAQMILRQGFVHVDGKPRKDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IP+T + FR+LYD KGRF L  + + EA  K+ KV +V  G   +P   T+DG
Sbjct: 82  GFMDVVEIPETGDRFRILYDVKGRFALVRISEAEAGIKMLKVINVYTGTGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP  +  DT+  D+++ K  D I+   G +V+VTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTRRGDTLVYDVKKKKAVDLIRTGNGRVVLVTGGANRGRIGEIVSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQAAQAAA 284
           F+   ++DA GHEFATR  N+F IGK  K   ++LPK +G+++++I+E R+ +  +A A
Sbjct: 202 FDIARLKDAAGHEFATRATNIFVIGKDMKSIPITLPKQQGLRINVIQE-REEKLIEAEA 259


>gi|342185473|emb|CCC94956.1| putative 40S ribosomal protein S4 [Trypanosoma congolense IL3000]
          Length = 273

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 120/228 (52%), Positives = 152/228 (66%), Gaps = 1/228 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK RECL L++++RNRLKYAL   E   IL Q  V VDGK R D  YPA
Sbjct: 22  GVFAPRPRAGPHKLRECLSLLIIIRNRLKYALNAHEAQMILRQGLVCVDGKPRKDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FR+LYD KGRF L  + + EA  K+ KV +V  G   IP   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKMMKVVNVYTGTGRIPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  D++  K+TD IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMVTGGANRGRIGEIVSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEE 273
           F+   ++DA GHEFATR  N+F IGK  S   V+LPK  G++ ++I E
Sbjct: 202 FDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQLGLRKNVIVE 249


>gi|71415246|ref|XP_809696.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
 gi|71415254|ref|XP_809700.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
 gi|71653417|ref|XP_815346.1| 40S ribosomal protein S4 [Trypanosoma cruzi strain CL Brener]
 gi|2981290|gb|AAC38966.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
 gi|2981292|gb|AAC38967.1| ribosomal protein S4 homolog [Trypanosoma cruzi]
 gi|70874118|gb|EAN87845.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
 gi|70874122|gb|EAN87849.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
 gi|70880395|gb|EAN93495.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
 gi|83375600|gb|ABC17643.1| ribosomal protein S4 copy 1 [Trypanosoma cruzi]
 gi|83375601|gb|ABC17644.1| ribosomal protein S4 copy 2 [Trypanosoma cruzi]
 gi|83375604|gb|ABC17646.1| ribosomal protein S4 copy 3 [Trypanosoma cruzi]
 gi|205278880|gb|ACI02315.1| ribosomal protein S4-like protein [Trypanosoma cruzi]
 gi|407852324|gb|EKG05879.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi]
          Length = 273

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 117/238 (49%), Positives = 156/238 (65%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK REC+ L++++RNRLKYAL   E   IL Q  V VDGK R D  YP 
Sbjct: 22  GVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMILRQGLVCVDGKPRKDTKYPV 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IP+T + FR+LYD KGRF L  + + E   KL KV +V      IP   T+DG
Sbjct: 82  GFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVENVYTSTGRIPVAMTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  +L+E K+ D IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+   ++DA GHEFATR  N+F IGK  +   V+LPK +G+++++I+E  ++  A  A
Sbjct: 202 FDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINVIQEREEKLIAAEA 259


>gi|255710091|gb|ACU30865.1| 40S ribosomal protein S4 [Ochlerotatus triseriatus]
          Length = 178

 Score =  233 bits (594), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 108/177 (61%), Positives = 139/177 (78%)

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT+ENFRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +P+I T+DG
Sbjct: 1   GFMDVITIDKTSENFRLIYDVKGRFTVHRITPEEAKYKLLKVKRVQIGPKKVPFILTHDG 60

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDP+I  ND+I+ D+   K+ D +KF+ GN+ M+TGGRN GRVG +  REKH GS
Sbjct: 61  RTIRYPDPIIHQNDSIQYDIATGKVMDVLKFEPGNLCMITGGRNLGRVGTVIQREKHPGS 120

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           FE +HI+D+ GH FATRL NVF IGK +K ++SLPKGKG+KLSI EE  +R A++AA
Sbjct: 121 FEIVHIKDSTGHVFATRLTNVFIIGKATKAFISLPKGKGVKLSIAEERDRRLASKAA 177


>gi|407412707|gb|EKF34479.1| 40S ribosomal protein S4, putative [Trypanosoma cruzi marinkellei]
          Length = 273

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 117/238 (49%), Positives = 156/238 (65%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P +GPHK REC+ L++++RNRLKYAL   E   IL Q  V VDGK R D  YP 
Sbjct: 22  GVFAPRPRAGPHKLRECMTLMIIIRNRLKYALNAAEAQMILRQGLVCVDGKPRKDTKYPV 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IP+T + FR+LYD KGRF L  + + E   KL KV +V      IP   T+DG
Sbjct: 82  GFMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEGNIKLLKVVNVYTSTGRIPVAMTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DT+  +L+E K+ D IK   G +VMVTGG NRGR+G I + E+H G+
Sbjct: 142 HRIRYPDPRTHRGDTLVYNLKEKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSIERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+   ++DA GHEFATR  N+F IGK  +   V+LPK +G+++++I+E  ++  A  A
Sbjct: 202 FDIARLKDAAGHEFATRASNIFVIGKDMQSVPVTLPKQQGLRINVIQEREEKLIAAEA 259


>gi|355703406|gb|EHH29897.1| hypothetical protein EGK_10441, partial [Macaca mulatta]
          Length = 245

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 116/216 (53%), Positives = 150/216 (69%), Gaps = 6/216 (2%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS+GPHK RECLP I  LRNRLKYALT  EV  I MQ  + VDGK+RTD   P 
Sbjct: 36  GVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDEVKKICMQWFIKVDGKIRTDNNLPY 94

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
             MDV+SI K  E+F L+Y    RF LH +  EE K+KLCK+R +    KGIP++  +D 
Sbjct: 95  WIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPHLVIHDI 154

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            T+R+PD LIK NDTI++DLE  KIT  +KFD GN+ +VTGG N GR+G+I NRE+H  S
Sbjct: 155 HTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGGANWGRIGVITNRERHPVS 213

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           F+T H++DA  + F+     +F I KG+KPW+SLP+
Sbjct: 214 FDTFHVKDANSNSFSI----IFVIDKGNKPWISLPR 245


>gi|4432937|dbj|BAA21076.1| Y-chromosome linked ribosomal protein S4 [Macaca fuscata]
          Length = 165

 Score =  230 bits (587), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 107/165 (64%), Positives = 131/165 (79%)

Query: 71  RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 130
           RNRLKYALT  EV  I MQR + +DGKVR D TYPAGFMDV+SI KT E+FRL+YDTKGR
Sbjct: 1   RNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGR 60

Query: 131 FRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENK 190
           F +H +  EEAK+KLCKVR +  G KGIP++ T+D RTIRYPDPLIK NDT+++DL   K
Sbjct: 61  FAVHRITVEEAKYKLCKVRKITMGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGK 120

Query: 191 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 235
           I +FIKF+ GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA
Sbjct: 121 IINFIKFETGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDA 165


>gi|146080976|ref|XP_001464142.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
 gi|134068232|emb|CAM66518.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
          Length = 480

 Score =  230 bits (586), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 120/238 (50%), Positives = 154/238 (64%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 229 GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 288

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL KV ++      +P   T+DG
Sbjct: 289 GFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 348

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  +++E K  D IK   G  V+VTGG NRGR+G I   E H G+
Sbjct: 349 HRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGA 408

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F   H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 409 FNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNVIQEREERLIAAEA 466


>gi|154333974|ref|XP_001563242.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060254|emb|CAM45663.1| putative 40S ribosomal protein S4 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 273

 Score =  229 bits (585), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 155/238 (65%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 22  GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ IPKT + FRLLYD KGRF L S+ + EA+ KL KV ++      +P   T+DG
Sbjct: 82  GFMDVIEIPKTGDRFRLLYDVKGRFALVSVSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  ++ E K  D IK   G  V+VTGG NRGR+G I   E+H G+
Sbjct: 142 HRIRYPDPHCSIGDTIVYNVNEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVERHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F+  H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 202 FDIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLIAAEA 259


>gi|109124282|ref|XP_001109776.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Macaca
           mulatta]
          Length = 244

 Score =  229 bits (584), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 116/215 (53%), Positives = 149/215 (69%), Gaps = 6/215 (2%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS+GPHK RECLP I  LRNRLKYALT  EV  I MQ  + VDGK+RTD   P 
Sbjct: 36  GVFAARPSTGPHKLRECLPHIF-LRNRLKYALTGDEVKKICMQWFIKVDGKIRTDNNLPY 94

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
             MDV+SI K  E+F L+Y    RF LH +  EE K+KLCK+R +    KGIP++  +D 
Sbjct: 95  WIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCKMRKIFVRAKGIPHLVIHDI 154

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            T+R+PD LIK NDTI++DLE  KIT  +KFD GN+ +VTGG N GR+G+I NRE+H  S
Sbjct: 155 HTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGGGNWGRIGVITNRERHPVS 213

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           F+T H++DA  + F+     +F I KG+KPW+SLP
Sbjct: 214 FDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244


>gi|401417661|ref|XP_003873323.1| putative 40S ribosomal protein S4 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322489552|emb|CBZ24810.1| putative 40S ribosomal protein S4 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 430

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 154/238 (64%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 179 GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 238

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++      +P   T+DG
Sbjct: 239 GFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 298

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  +++E K  D IK   G  V+VTGG NRGR+G I   E H G+
Sbjct: 299 HRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGA 358

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F   H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 359 FNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLIAAEA 416


>gi|146080974|ref|XP_001464141.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
 gi|398012258|ref|XP_003859323.1| 40S ribosomal protein S4, putative [Leishmania donovani]
 gi|134068231|emb|CAM66517.1| putative 40S ribosomal protein S4 [Leishmania infantum JPCM5]
 gi|322497537|emb|CBZ32611.1| 40S ribosomal protein S4, putative [Leishmania donovani]
          Length = 273

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 120/238 (50%), Positives = 154/238 (64%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 22  GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FRL+YD KGRF L SL + EA+ KL KV ++      +P   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRLMYDVKGRFALVSLSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  +++E K  D IK   G  V+VTGG NRGR+G I   E H G+
Sbjct: 142 HRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F   H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 202 FNIAHLKDASGAEFATRAANIFVIGKDLNHLQVTVPKQQGLRMNVIQEREERLIAAEA 259


>gi|157866320|ref|XP_001681866.1| putative 40S ribosomal protein S4 [Leishmania major strain
           Friedlin]
 gi|157866322|ref|XP_001681867.1| putative 40S ribosomal protein S4 [Leishmania major strain
           Friedlin]
 gi|11066280|gb|AAG28535.1|AF199018_1 40S ribosomal protein S4 [Leishmania major]
 gi|68125165|emb|CAJ03041.1| putative 40S ribosomal protein S4 [Leishmania major strain
           Friedlin]
 gi|68125166|emb|CAJ03044.1| putative 40S ribosomal protein S4 [Leishmania major strain
           Friedlin]
          Length = 273

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 154/238 (64%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 22  GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++      +P   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  +++E K  D IK   G  V+VTGG NRGR+G I   E H G+
Sbjct: 142 HRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F   H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 202 FNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLIAAEA 259


>gi|70909483|emb|CAJ17166.1| ribosomal protein S4e [Curculio glandium]
          Length = 188

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 105/164 (64%), Positives = 131/164 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+  P+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 25  GVFTPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKIRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I KT E FRL+YD KG   +H +  EEAK+KLCKVR VQ G KG+P++ T+DG
Sbjct: 85  GFMDVVTIEKTGEFFRLIYDDKGTVSIHRITAEEAKYKLCKVRKVQTGPKGVPFLVTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN 210
           +TIRYPDP+IK NDTI+L++  +KI DFIKF+ GN+ M+TGGRN
Sbjct: 145 KTIRYPDPMIKVNDTIQLEIATSKILDFIKFESGNLCMITGGRN 188


>gi|401417663|ref|XP_003873324.1| putative 40S ribosomal protein S4 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322489553|emb|CBZ24811.1| putative 40S ribosomal protein S4 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 273

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 154/238 (64%), Gaps = 1/238 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RECLPL++++RNRLKYAL  RE   IL Q  V VD   R D  YPA
Sbjct: 22  GVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMILRQGLVHVDNHPRRDGKYPA 81

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV IPKT + FRL+YD KGRF L +L + EA+ KL KV ++      +P   T+DG
Sbjct: 82  GFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMKVVNLYTATGRVPVAVTHDG 141

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             IRYPDP     DTI  +++E K  D IK   G  V+VTGG NRGR+G I   E H G+
Sbjct: 142 HRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRGRIGEIVKVECHPGA 201

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGKGIKLSIIEEARKRQAAQAA 283
           F   H++DA G EFATR  N+F IGK  +   V++PK +G+++++I+E  +R  A  A
Sbjct: 202 FNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLIAAEA 259


>gi|148700270|gb|EDL32217.1| mCG6316 [Mus musculus]
          Length = 180

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/156 (68%), Positives = 126/156 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGK+RT   YPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKEICMQRFIKIDGKIRTGIIYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
            TIRYPDPLIK NDTI++DLE  KITDFIKFD GN+
Sbjct: 145 LTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL 180


>gi|431915230|gb|ELK15917.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 204

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 110/182 (60%), Positives = 134/182 (73%)

Query: 46  LGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 105
           +G+ A  PS+ PHK RECLPLI+ LRNRLK AL   E   I MQR + +DG+V TD TYP
Sbjct: 6   MGVFATHPSTSPHKLRECLPLIVFLRNRLKCALIGDEDKKICMQRFIKIDGQVWTDVTYP 65

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFMD +SI KT ENFRL+YDTKG F +H +  EEAK+KLCKVR +  G KGIP++ T  
Sbjct: 66  AGFMDDISIDKTGENFRLVYDTKGCFPVHQITSEEAKYKLCKVRKIFVGTKGIPHLVTDG 125

Query: 166 GRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG 225
             TIRY +PLIK NDTI++ LE  +ITDFIKFD GN+  VTGG N G++G+I NRE+H G
Sbjct: 126 AHTIRYSNPLIKVNDTIQIYLETGEITDFIKFDTGNMHTVTGGANLGKIGVITNRERHPG 185

Query: 226 SF 227
           S 
Sbjct: 186 SL 187


>gi|444708012|gb|ELW49140.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 177

 Score =  224 bits (570), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 104/176 (59%), Positives = 133/176 (75%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           MDV+SI KT ENF L+YD KGR  +H +  EEAK+KLCK+R +  G KGIP++ T+D  T
Sbjct: 1   MDVISIDKTRENFHLIYDIKGRVAVHCITPEEAKYKLCKMRKIFVGTKGIPHLVTHDAHT 60

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           I YPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTG  N  R+G+I NRE+H GSF+
Sbjct: 61  ICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGHANLKRIGVITNRERHPGSFD 120

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
             H++D  G+ FAT+  N+F I KG+KPWV LP+GKGI+L+I EE  KR AA+ ++
Sbjct: 121 VAHVKDPNGNSFATQPSNIFVISKGNKPWVYLPRGKGIRLTIAEERDKRLAAKQSS 176


>gi|390331682|ref|XP_001192878.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
           purpuratus]
          Length = 253

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/232 (52%), Positives = 145/232 (62%), Gaps = 47/232 (20%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+ S+GPHK RECLPLI+ LRNRLKYALTY E   I+MQR + VDGKVRTD TYPAGFM
Sbjct: 68  APRASTGPHKLRECLPLIIFLRNRLKYALTYVETKKIMMQRLIKVDGKVRTDITYPAGFM 127

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENFRL+Y+ KGRF +H +  EEAK +                         
Sbjct: 128 DVISINKTGENFRLIYNVKGRFVVHRIGSEEAKVRFVI---------------------- 165

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
               P +K                      G++ M+TGGRN GRVG I +REKH GSFE 
Sbjct: 166 ---HPRLK----------------------GHLCMITGGRNLGRVGTITHREKHPGSFEI 200

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +HI+DA  H +ATRLGNVF IGK +K +VSLPKGKGI+L+I EE  KR A +
Sbjct: 201 VHIKDASDHTYATRLGNVFVIGKANKAYVSLPKGKGIRLTIAEEREKRIAQR 252


>gi|431917973|gb|ELK17202.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 258

 Score =  223 bits (568), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/238 (49%), Positives = 148/238 (62%), Gaps = 36/238 (15%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS   HK +E LPLI+ LRN LKYALT  EV  I MQR + +DG+V+TD TYPA
Sbjct: 56  GVFAPHPSISSHKLKESLPLIIFLRNSLKYALTGDEVKKICMQRFIKIDGQVQTDVTYPA 115

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI K  EN+ LL DTKG F +  +  EEAK KLCK+                  
Sbjct: 116 GFMDVISIDKIRENYCLLCDTKGHFTVREITTEEAKHKLCKI------------------ 157

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
                             DLE  KITDFIKFD GN+ MVTG  N GR+G+I NRE+H GS
Sbjct: 158 ------------------DLETGKITDFIKFDTGNLCMVTGSANLGRIGVITNRERHPGS 199

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            + +H++DA G+ FATRL N+F IGKG+   +SLP GKGI L+I ++  KR AA+ ++
Sbjct: 200 CDVVHVKDANGNSFATRLSNIFVIGKGNNQGISLPCGKGIHLTIAKDRDKRLAAKQSS 257


>gi|47935075|gb|AAT39884.1| ribosomal protein S4 [Branchiostoma belcheri tsingtauense]
          Length = 158

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/158 (63%), Positives = 124/158 (78%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR + VDGKVRTD+ YPAGFMDV++I KT ENFRL+YD KGRF +H +  EEAK+KLCK
Sbjct: 1   MQRLIKVDGKVRTDRCYPAGFMDVITIEKTAENFRLIYDVKGRFTIHRITPEEAKYKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR V  G KGIP + T+D RTIRYPDP I+ ND++++D+   KITD IKFD GN+ MVTG
Sbjct: 61  VRKVMTGPKGIPCLVTHDARTIRYPDPKIQVNDSVQVDITTGKITDSIKFDTGNVCMVTG 120

Query: 208 GRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLG 245
           GRN GRVG++ NRE+H GSF+ +H++D   H FATRL 
Sbjct: 121 GRNLGRVGLVTNRERHPGSFDIVHVKDTASHTFATRLA 158


>gi|119623175|gb|EAX02770.1| ribosomal protein S4, Y-linked 1, isoform CRA_a [Homo sapiens]
          Length = 179

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 124/155 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 201
           RTIRYPDP+IK NDT+++DL   KI +FIKFD G 
Sbjct: 145 RTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGQ 179


>gi|195548072|gb|ACG49261.1| 40S ribosomal protein S4 [Anopheles stephensi]
          Length = 187

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 102/163 (62%), Positives = 126/163 (77%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQRHV +DGKVRTD  YPA
Sbjct: 25  GTFAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRHVKIDGKVRTDPNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT E FRL+YD KGRF +H +  EEAK+KL KV+ VQ G K +PY+ T+DG
Sbjct: 85  GFMDVINIHKTGEYFRLIYDVKGRFTVHRITSEEAKYKLLKVKRVQIGPKRVPYLLTHDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 209
           RTIRYPDP I  +D+I+ D+   KI D +KF+ GN+ M+TGGR
Sbjct: 145 RTIRYPDPAIHQHDSIQYDIATGKILDVLKFEPGNLYMITGGR 187


>gi|241710443|ref|XP_002413398.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
 gi|215507212|gb|EEC16706.1| 40S ribosomal protein S4, putative [Ixodes scapularis]
          Length = 160

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 103/151 (68%), Positives = 121/151 (80%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+PS+GPHK RE LPLI++LRNRLKYALT  EV  I+ QR + VDGKVRTD  YPAGFM
Sbjct: 1   APRPSTGPHKLRESLPLIIMLRNRLKYALTGAEVKKIVKQRLIKVDGKVRTDTNYPAGFM 60

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVV+I KT E FRLLYD KGRF LH +  EEAK+KLC+V+ VQ G KG+P++ T+D RTI
Sbjct: 61  DVVTIEKTGEFFRLLYDVKGRFTLHRITPEEAKYKLCRVKRVQVGPKGVPFLTTHDARTI 120

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
           RYPDPLIK NDT+K+DL   KI D+IKFD G
Sbjct: 121 RYPDPLIKVNDTVKVDLATGKIDDYIKFDSG 151


>gi|323332920|gb|EGA74323.1| Rps4bp [Saccharomyces cerevisiae AWRI796]
          Length = 164

 Score =  216 bits (551), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 126/161 (78%)

Query: 122 RLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDT 181
           RL+YD KGRF +H + DEEA +KL KV+ VQ G+KG+PY+ T+DGRTIRYPDP IK NDT
Sbjct: 3   RLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDT 62

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 241
           +K+DL   KITDFIKFD G +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F 
Sbjct: 63  VKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFV 122

Query: 242 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           TRL NVF IG+  KP++SLPKGKGIKLSI EE  +R+A Q 
Sbjct: 123 TRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQQG 163


>gi|388506280|gb|AFK41206.1| unknown [Lotus japonicus]
          Length = 141

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/110 (91%), Positives = 107/110 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRH+LVDGKVRTDKTYP+
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHILVDGKVRTDKTYPS 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQK 156
           GFMDVVSIPKTNENFRLLYD KGRFRLHS+RD+EAKFKLCKVRSVQFGQ+
Sbjct: 85  GFMDVVSIPKTNENFRLLYDIKGRFRLHSVRDDEAKFKLCKVRSVQFGQR 134


>gi|119632118|gb|EAX11713.1| hCG38986, isoform CRA_a [Homo sapiens]
          Length = 160

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/154 (65%), Positives = 122/154 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQ  + +DGKVR D TYPA
Sbjct: 7   GVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRVDITYPA 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GF+DV+SI KT E+FRL+Y+TKG F +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 67  GFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
           RTIRYPDPLIK NDT+++DL   KIT FIKFD G
Sbjct: 127 RTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTG 160


>gi|402593341|gb|EJW87268.1| ribosomal protein S4e [Wuchereria bancrofti]
          Length = 197

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/176 (56%), Positives = 129/176 (73%), Gaps = 1/176 (0%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ I KTNE FRLLYD KGR+  H + ++E   KLCK+     G KG+P+I T+D RTI
Sbjct: 22  DVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKGVPFIVTHDARTI 81

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDP +K NDTI +D+   K++D++KFD GN+ MVTGGRN GRVGI+ +REKH GSF+ 
Sbjct: 82  RYPDPHVKVNDTIVVDIATGKMSDYVKFDQGNLCMVTGGRNMGRVGIVGHREKHPGSFDI 141

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLP-KGKGIKLSIIEEARKRQAAQAAA 284
           +HI+DA  H FATRL NVF IGKG+K  VSLP   KG++L+I EE  +R A + A+
Sbjct: 142 VHIKDAADHSFATRLNNVFIIGKGTKSIVSLPGPTKGVRLTIAEERDRRLAQKRAS 197


>gi|351708512|gb|EHB11431.1| 40S ribosomal protein S4 [Heterocephalus glaber]
          Length = 224

 Score =  209 bits (533), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 106/207 (51%), Positives = 136/207 (65%), Gaps = 26/207 (12%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+  HK RECLPLI+ LRNRL YALT  EV  I MQ  + VD KV+TD T   
Sbjct: 7   GVFAPRPSTSSHKLRECLPLIIFLRNRLNYALT-SEVKKICMQHFIKVDDKVQTDIT--- 62

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
                                 G F +H +  EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 63  ----------------------GHFAIHHITPEEAKYKLCKVRKICVGTKGIPHLVTHDA 100

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTIRYPDPLIK NDTI++DL+  KITDFIKFD GN+ MVTGG N G++G+I NR++H GS
Sbjct: 101 RTIRYPDPLIKVNDTIQIDLDTGKITDFIKFDTGNLCMVTGGANLGKIGVITNRKRHPGS 160

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKG 253
           F+  H++DA  + FAT+L ++  + K 
Sbjct: 161 FDVAHVKDANDNRFATQLSHILLLAKA 187


>gi|60418888|gb|AAX19871.1| putative ribosomal protein S4, partial [Doryanthes excelsa]
          Length = 131

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/107 (90%), Positives = 104/107 (97%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHK+RECLPLIL+LRN+LKYALTYREVIAILMQRHV+VD KVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKARECLPLILILRNKLKYALTYREVIAILMQRHVMVDAKVRTDKTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 153
           GFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAKFKLCKVR+VQF
Sbjct: 85  GFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRNVQF 131


>gi|440493255|gb|ELQ75750.1| 40S ribosomal protein S4 [Trachipleistophora hominis]
          Length = 267

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 155/238 (65%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           ++G+ AP+PS+GPH+ +E +PL L+L ++L+YA T +EV  IL +R + ++G++RTDK +
Sbjct: 23  NVGVFAPRPSTGPHRLQESIPLSLLLTDKLQYARTGKEVGNILKERMIKINGRIRTDKRF 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV+SIPKT E++RLLY+  GRF LH + +EE+KF+L  +R     +  +PY+ T 
Sbjct: 83  PVGIFDVLSIPKTGEHYRLLYNVAGRFILHQISEEESKFRLSIIRKKLLRKGKVPYLYTN 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DG +  Y D  I  +DT+K+DLE  +I+DF+   VGN+  +  GRN G VG+I N E+  
Sbjct: 143 DGASFSYCDQDIVPSDTVKVDLETGRISDFLHISVGNLAFIKKGRNMGCVGVITNIEEKG 202

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
                +++ D  G  FATR  NV  IG     W+SLP+ +G+KLS+ +E+  R   + 
Sbjct: 203 VEDCKVYLVDKKGRVFATRKVNVCVIGPDGNSWISLPENEGVKLSVFDESNIRYEGET 260


>gi|410043724|ref|XP_003951666.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pan
           troglodytes]
          Length = 153

 Score =  202 bits (515), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 93/153 (60%), Positives = 116/153 (75%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           MDV+SI K  ENF L+YDTK  F +H +  E AK+KLCKVR +  G KGIP++ T+D  T
Sbjct: 1   MDVISIDKMRENFCLIYDTKSCFDVHLITPEVAKYKLCKVRKIFVGTKGIPHLVTHDAHT 60

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           I Y DPLIK NDTI++DLE  KITDFIKFD G + MVTGG N  R+G+I NRE+H GSF+
Sbjct: 61  IHYLDPLIKVNDTIQIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNRERHPGSFD 120

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
            +H++DA G+ FA RL N+F IGKG+KPW+SLP
Sbjct: 121 VVHVKDANGNSFAARLSNIFVIGKGNKPWISLP 153


>gi|302420133|ref|XP_003007897.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
 gi|261353548|gb|EEY15976.1| 40S ribosomal protein S4-A [Verticillium albo-atrum VaMs.102]
          Length = 187

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 92/139 (66%), Positives = 116/139 (83%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+PS+GPHK R+C+PLI+ LRNRLKYAL +RE  +I+MQR V VDGKVRTD TYPA
Sbjct: 25  GTYAPRPSAGPHKLRDCMPLIVFLRNRLKYALNFRETRSIMMQRLVKVDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KT ENFRL+YD KGRF +H ++ EEA++KL KV+ VQ G+ G+P++ T+D 
Sbjct: 85  GFMDVITIEKTGENFRLIYDIKGRFTVHRIQAEEAEYKLGKVKRVQLGRGGVPFLVTHDA 144

Query: 167 RTIRYPDPLIKANDTIKLD 185
           RTIRYPDPLIK NDT+K+D
Sbjct: 145 RTIRYPDPLIKVNDTVKID 163


>gi|432102129|gb|ELK29938.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 183

 Score =  200 bits (508), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 123/162 (75%), Gaps = 2/162 (1%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQ  + ++GKV+TD TYPAGF+DV+SI KT EN RL+YDTK RF +H  R EEAK+KLCK
Sbjct: 1   MQWFIEINGKVQTDVTYPAGFVDVISIDKTGENVRLVYDTKSRFAVHR-RPEEAKYKLCK 59

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR +  G KGIP++ T D RTIRYP+PLIK NDTI++DLE  KITDFI  D G + M+T 
Sbjct: 60  VRKIFMGTKGIPHLVTQDARTIRYPEPLIKVNDTIQIDLESGKITDFITLDTGKLCMITR 119

Query: 208 GRNRGRVGIIKNREKHKGSFETI-HIQDALGHEFATRLGNVF 248
           G N G++G+I +REKH GSF+ I H++ A G+ FAT L N+F
Sbjct: 120 GANLGKIGVITDREKHPGSFDIIVHVKYATGNSFATLLSNIF 161


>gi|429964745|gb|ELA46743.1| hypothetical protein VCUG_01769 [Vavraia culicis 'floridensis']
          Length = 267

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 151/236 (63%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPH+  E +PL L+L ++L+YA T +EV  IL ++ + ++G++RTDK +P 
Sbjct: 25  GVFAPRPSTGPHRLEESIPLSLLLTDKLQYARTAKEVGNILKEKMIKINGRIRTDKRFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DV+SIPKT E++RL+Y+  GRF LH + +EE+KF+L  VR  +  +  +PY+ T DG
Sbjct: 85  GIFDVLSIPKTGEHYRLMYNVAGRFILHQIGEEESKFRLAIVRKKRLRKGKVPYLYTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +  Y D  I   DT+K+DLE  +I++ +   +GN+  +  GRN G VG++ N E+    
Sbjct: 145 GSFSYCDQDIVPGDTVKVDLETGRISEHLHVAIGNLAFIKKGRNMGCVGVVTNIEEKGIG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
              +++ D     FATR  NV+ IG     W+SLP+G G+KLS+ +E+  R   + 
Sbjct: 205 DRKVYLVDKKERVFATRQVNVYVIGPDGSSWISLPEGDGVKLSVFDESNIRYEGET 260


>gi|166952347|gb|ABZ04256.1| ribosomal protein rps4 [Lineus viridis]
          Length = 153

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 106/129 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPL + LRNRLKYALTY E + I+MQR + VDGKVRTDK YPA
Sbjct: 25  GVFAPKPSCGPHKMRECLPLTIFLRNRLKYALTYDECVKIVMQRLIKVDGKVRTDKNYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KTNENFRL+YD KGRF +H +  EEAK+KLCKV+ +    KG+PY+ T+DG
Sbjct: 85  GFMDVVSIEKTNENFRLIYDVKGRFAIHRITPEEAKYKLCKVKKLGVAAKGVPYVVTHDG 144

Query: 167 RTIRYPDPL 175
           RTIRYPDPL
Sbjct: 145 RTIRYPDPL 153


>gi|387594076|gb|EIJ89100.1| ribosomal protein S4 [Nematocida parisii ERTm3]
 gi|387595723|gb|EIJ93346.1| ribosomal protein S4 [Nematocida parisii ERTm1]
          Length = 277

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/228 (44%), Positives = 139/228 (60%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+P  GPHK RECLPL L++R +L +A   +EV+ IL  R V VDGKVR D  YPA
Sbjct: 25  GTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKEVLHILNDRLVKVDGKVRKDPKYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVVS  K +EN+RLLY+   +F L  +  EEAKFKLCKV S +   + I  ++T DG
Sbjct: 85  GVMDVVSFDKIHENYRLLYNVNKKFCLQPITKEEAKFKLCKVLSKRLEGRSILTLHTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTI+Y DP IK  D+IK DLE  ++  F   +VG       G+N G VGII+  + H   
Sbjct: 145 RTIKYADPSIKIGDSIKFDLESGEVQGFYSLEVGKTAYAFRGKNLGCVGIIREIKVHISG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
           F    ++D  G  + TR  N+  IG   +  ++LPK +GI+ + + ++
Sbjct: 205 FSISILEDLNGRMYTTRTDNLMVIGNAGESLITLPKERGIRTNAMMDS 252


>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
          Length = 713

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 92/155 (59%), Positives = 119/155 (76%), Gaps = 1/155 (0%)

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI KT ENF  +YDTKG F +H +  EEAK+KLCK+R +  G+K + ++ T+D  TI
Sbjct: 347 DVISIDKTRENFLQIYDTKGLFAVH-ITPEEAKYKLCKMRKIFVGRKELLHLVTHDAGTI 405

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           R PDPLIK NDTI++DLE  KI +FIKFD  N+ MVTGG N GR+G+I NRE+H GSF+ 
Sbjct: 406 RCPDPLIKVNDTIQIDLETEKIIEFIKFDTDNLFMVTGGDNLGRIGVITNRERHPGSFDL 465

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
           +H++DA G+ FAT L N+F IGKG+KPW+SLP GK
Sbjct: 466 VHVKDANGNNFATWLSNIFVIGKGNKPWISLPHGK 500


>gi|440904091|gb|ELR54652.1| hypothetical protein M91_21175, partial [Bos grunniens mutus]
          Length = 130

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 91/130 (70%), Positives = 107/130 (82%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQ  + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCK
Sbjct: 1   MQHFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITTEEAKYKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR +  G KGIP++ T+D RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTG
Sbjct: 61  VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTG 120

Query: 208 GRNRGRVGII 217
           G N GR+G+I
Sbjct: 121 GANLGRIGVI 130


>gi|332213865|ref|XP_003256051.1| PREDICTED: 40S ribosomal protein S4, Y isoform 2-like [Nomascus
           leucogenys]
          Length = 170

 Score =  192 bits (488), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 111/142 (78%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           +KLCKVR +  G KGIP++ T+D RTIRYPDPLIK N+T+++DL   KIT FIKFD GN+
Sbjct: 28  YKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNNTVQIDLGTGKITSFIKFDTGNV 87

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
            MV GG N GRVG++ NRE+H GS   +H++DA G+ FATR+ N+F IG G+KPW+SLP+
Sbjct: 88  CMVIGGANLGRVGVVTNRERHPGSCNVVHVKDANGNSFATRISNIFVIGNGNKPWISLPR 147

Query: 263 GKGIKLSIIEEARKRQAAQAAA 284
           GKGI+L+I EE  KR AA+ ++
Sbjct: 148 GKGIRLTIAEEREKRLAAKQSS 169


>gi|189484003|gb|ACE00295.1| ribosomal protein S4 [Caenorhabditis brenneri]
          Length = 177

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/154 (61%), Positives = 114/154 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +P+ GPHK RE LPL L LRNRLKYAL Y E   IL QR V VDGKVRT   +P 
Sbjct: 24  GVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRTCHKFPT 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV+I +TNE FR+LYDTKGR+ +H ++  EA FKLCKV+SV+   KG+P + T DG
Sbjct: 84  GFMDVVAIDRTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVIKGVPVLTTTDG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
           RTIRYPDP +K NDTI  ++   KITDF+KF+ G
Sbjct: 144 RTIRYPDPHVKVNDTIVFNINTQKITDFVKFEPG 177


>gi|379072624|gb|AFC92944.1| ribosomal protein S4, X-linked, partial [Pipa carvalhoi]
          Length = 129

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 107/128 (83%)

Query: 156 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           KGIP++ T+D RTIRYPDPLIK NDT+++DLE  KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2   KGIPHLVTHDARTIRYPDPLIKVNDTVQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61

Query: 216 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 275
           +I NRE+H GSF+ +H++DA G+ FATRL N+F IGKGSKPW+SLP+GKGI+L+I EE  
Sbjct: 62  VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGSKPWISLPRGKGIRLTIAEERD 121

Query: 276 KRQAAQAA 283
           KR AA+ +
Sbjct: 122 KRLAAKQS 129


>gi|378755999|gb|EHY66024.1| ribsomal protein S4 [Nematocida sp. 1 ERTm2]
          Length = 278

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 138/228 (60%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP+P  GPHK RECLPL L++R +L +A   +EV+ IL  R V VDGK+R D  YPA
Sbjct: 25  GTFAPRPRCGPHKLRECLPLCLIVRRKLSFAQNTKEVLHILNDRLVKVDGKIRKDPKYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+S  K +EN+RLLY+   +F L  +  EEAKFK+CKV + +   + I  ++T DG
Sbjct: 85  GIMDVISFDKIHENYRLLYNVNQKFCLQPITKEEAKFKICKVLAKRLEGRSILTLHTNDG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           RTI+Y DP I   D++K +LE  ++ +     VGN      G+N G VGII+  + H   
Sbjct: 145 RTIKYADPSINIGDSVKFNLETGEVMESFPLKVGNTAYAFRGKNLGCVGIIREVKVHISG 204

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
           F    ++D  G  + TR  N+  IG   +  ++LPK +GI+ + + E+
Sbjct: 205 FTISILEDLNGRMYTTRTDNLMAIGTAGESLITLPKERGIRTNALMES 252


>gi|379072626|gb|AFC92945.1| ribosomal protein S4, X-linked, partial [Rhinophrynus dorsalis]
          Length = 129

 Score =  189 bits (481), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 86/128 (67%), Positives = 107/128 (83%)

Query: 156 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           KGIP++ T+D RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GRVG
Sbjct: 2   KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRVG 61

Query: 216 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 275
           +I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  
Sbjct: 62  VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERG 121

Query: 276 KRQAAQAA 283
           KR AA+ +
Sbjct: 122 KRLAAKQS 129


>gi|255641952|gb|ACU21243.1| unknown [Glycine max]
          Length = 123

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/98 (90%), Positives = 94/98 (95%)

Query: 184 LDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATR 243
           LDLE NKITDFIKFDVGN+VMVTGGRNRGRVG+IKNREKHKGSFETIH+QDA GHEFATR
Sbjct: 21  LDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATR 80

Query: 244 LGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           +GNVF IGKG+KPWVSLPKGKGIKLSIIEEARKR AAQ
Sbjct: 81  MGNVFIIGKGTKPWVSLPKGKGIKLSIIEEARKRLAAQ 118


>gi|379072628|gb|AFC92946.1| ribosomal protein S4, X-linked, partial [Hymenochirus curtipes]
          Length = 129

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 107/128 (83%)

Query: 156 KGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           KGIP++ T+D RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR+G
Sbjct: 2   KGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 61

Query: 216 IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR 275
           +I NRE+H GSF+ +H++DA G+ FATRL N+F IGKG+KPW+SLP+GKGI+L+I EE  
Sbjct: 62  VITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 121

Query: 276 KRQAAQAA 283
           KR AA+ +
Sbjct: 122 KRLAAKQS 129


>gi|82393859|gb|ABB72228.1| ribosomal protein S4 X-linked [Bos taurus]
          Length = 127

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/123 (71%), Positives = 103/123 (83%)

Query: 94  VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 153
           +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  
Sbjct: 4   IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFV 63

Query: 154 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 213
           G KGIP++ T+D RTIRYPDPLIK NDTI++DLE  KITDFIKFD GN+ MVTGG N GR
Sbjct: 64  GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 123

Query: 214 VGI 216
           +G+
Sbjct: 124 IGV 126


>gi|291410370|ref|XP_002721473.1| PREDICTED: ribosomal protein S4, X-linked-like [Oryctolagus
           cuniculus]
          Length = 291

 Score =  187 bits (476), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 1/191 (0%)

Query: 94  VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 153
           +   V+T   YPAGF+DV+S  K  ENF L  DTKG F +H +  EEAK+KLCKVR +  
Sbjct: 101 ISWDVQTGTCYPAGFVDVMSFDKIRENFCLTCDTKGHFAVHCIIPEEAKYKLCKVRKILV 160

Query: 154 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 213
           G KGI +  T+D  TI YP  LIK   TI  DLE  K+TD    D  ++ MV G    GR
Sbjct: 161 GTKGILHCVTHDAPTIGYPHTLIKVKGTIPTDLEAGKVTDITTSDTNSLCMVPGDATLGR 220

Query: 214 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
            G++ NRE+H GSF+ + I DA G  FAT+L N+FT GKG+KPW SL +G+GI L+  EE
Sbjct: 221 TGVVTNRERHPGSFDVVDINDANGSSFATQLANIFT-GKGNKPWTSLHQGRGICLTFAEE 279

Query: 274 ARKRQAAQAAA 284
              R+AA+ ++
Sbjct: 280 RDGRRAARQSS 290


>gi|343473039|emb|CCD14964.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 214

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/189 (51%), Positives = 123/189 (65%), Gaps = 1/189 (0%)

Query: 86  ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 145
           IL Q  V VDGK R D  YPAGFMDVV IPKT + FR+LYD KGRF L  + + EA  K+
Sbjct: 2   ILRQGLVCVDGKPRKDGKYPAGFMDVVEIPKTGDRFRILYDVKGRFVLVRVSEAEAGMKM 61

Query: 146 CKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 205
            KV +V  G   IP   T+DG  IRYPDP     DT+  D++  K+TD IK   G +VMV
Sbjct: 62  MKVVNVYTGTGRIPVAVTHDGHRIRYPDPRTGRGDTLLYDVKAKKVTDLIKIGSGKVVMV 121

Query: 206 TGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKG-SKPWVSLPKGK 264
           TGG NRGR+G I + E+H G+F+   ++DA GHEFATR  N+F IGK  S   V+LPK  
Sbjct: 122 TGGANRGRIGEIVSIERHPGAFDIARLKDAAGHEFATRASNIFVIGKDMSSVPVTLPKQL 181

Query: 265 GIKLSIIEE 273
           G++ ++I E
Sbjct: 182 GLRKNVIVE 190


>gi|297694118|ref|XP_002824341.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Pongo abelii]
          Length = 134

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 107/134 (79%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           M+V+SI KT ENF L+YDTK  F +H +  EEAK+KLCKVR +  G KGIP++ T+DGRT
Sbjct: 1   MEVISIDKTEENFCLIYDTKSLFAVHHITPEEAKYKLCKVRKIFLGTKGIPHLVTHDGRT 60

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           I YPDPLIK NDTI++DLE +KITDFIKFD G++ MVTG  N GR+G+I NRE+H GSF+
Sbjct: 61  IHYPDPLIKVNDTIQIDLETSKITDFIKFDTGHLCMVTGSANLGRIGVITNRERHPGSFD 120

Query: 229 TIHIQDALGHEFAT 242
            IH++DA G+ FAT
Sbjct: 121 IIHMKDANGNSFAT 134


>gi|219880767|gb|ACL51658.1| ribosomal protein S4 Y-linked 1 [Callithrix jacchus]
          Length = 153

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 85/129 (65%), Positives = 104/129 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPH+ RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVR D TYP 
Sbjct: 25  GVFAPRPSTGPHRLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIRIDGKVRVDITYPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+SI KT E+FRL+YDTKGRF +H +R EEA++KLCKVR +  G KGIP++ T+D 
Sbjct: 85  GLMDVISIEKTGEHFRLVYDTKGRFAVHRIRVEEAEYKLCKVRKITMGTKGIPHLVTHDA 144

Query: 167 RTIRYPDPL 175
           RTIRYPDP+
Sbjct: 145 RTIRYPDPV 153


>gi|342906104|gb|AEL79335.1| ribosomal protein S4e [Rhodnius prolixus]
          Length = 132

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 86/131 (65%), Positives = 105/131 (80%)

Query: 147 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 206
           KV+ VQ G +GIP++ T+DGRTIRYPDPL K NDTI+LD+  +KI D I+ D GN+ M+T
Sbjct: 2   KVKKVQTGPRGIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMIT 61

Query: 207 GGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGI 266
           GGRN GRVG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+
Sbjct: 62  GGRNLGRVGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGV 121

Query: 267 KLSIIEEARKR 277
           KLSI EE  KR
Sbjct: 122 KLSIAEERDKR 132


>gi|414868249|tpg|DAA46806.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 194

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/186 (54%), Positives = 116/186 (62%), Gaps = 54/186 (29%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL++RN LKYALTY EVI+ILMQRHVLVDGK         
Sbjct: 55  GAFAPKPSSGPHKSRECLPLILIIRNMLKYALTYCEVISILMQRHVLVDGK--------- 105

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
                +S P   +  R++    G FRLH +RDE+A                         
Sbjct: 106 -----MSFPSLRQT-RII----GCFRLHPIRDEDA------------------------- 130

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
                     KANDTIK+DLE NKI DFIKFD+GN+VMVTGGRN   VG+IKNREKHKGS
Sbjct: 131 ----------KANDTIKIDLETNKIMDFIKFDIGNVVMVTGGRNTRHVGVIKNREKHKGS 180

Query: 227 FETIHI 232
           FETIH+
Sbjct: 181 FETIHV 186


>gi|355428416|gb|AER92524.1| hypothetical protein, partial [Triatoma rubida]
          Length = 133

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 105/131 (80%)

Query: 154 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 213
           G + IP++ T+DGRTIRYPDPL K NDTI+LD+  +KI D I+ D GN+ M+TGGRN GR
Sbjct: 2   GAERIPFLVTHDGRTIRYPDPLAKVNDTIQLDIATSKIIDIIRMDSGNLCMITGGRNLGR 61

Query: 214 VGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEE 273
           VG + NRE+H GSF+ +H++DA GH FATRL NVF IGKGSK +VSLPKGKG+KLSI EE
Sbjct: 62  VGTVVNRERHPGSFDIVHVKDASGHMFATRLNNVFIIGKGSKAYVSLPKGKGVKLSIAEE 121

Query: 274 ARKRQAAQAAA 284
             KR AA+AA+
Sbjct: 122 RDKRLAAKAAS 132


>gi|290561513|gb|ADD38157.1| 40S ribosomal protein S4 [Lepeophtheirus salmonis]
          Length = 266

 Score =  181 bits (459), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 140/230 (60%), Gaps = 4/230 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRH--VLVDGKVRTDKTY 104
           G+   +P+ GPHK RE LPL +VLR++L  A    E   IL Q+   V VD K+R +  Y
Sbjct: 25  GVYTVRPAQGPHKRRESLPLQIVLRDKLGLAFNGTECYKILKQKEGLVRVDQKIRREPKY 84

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSL--RDEEAKFKLCKVRSVQFGQKGIPYIN 162
           P G MDV+ +PK    +R+ YD KGRF+L  L  +  E  +K+C++         I Y+ 
Sbjct: 85  PVGLMDVIDLPKCGLAYRVFYDVKGRFKLMPLEKKTNEQNYKICRIVKKSVANNKIGYLI 144

Query: 163 TYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           ++DGRT+RY D  +  +D++KL+L  N+I D I    GN  +++ G NRGR+GII   +K
Sbjct: 145 SHDGRTLRYVDGAVMVHDSVKLNLSTNEIEDHIPLQNGNKALISHGNNRGRIGIIHQIKK 204

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
             GS++ + ++DA G  F TR+  V  IG G+K ++SLP  +G+K +I+E
Sbjct: 205 FPGSYDLVTLKDARGTTFTTRIDYVMPIGVGNKTFLSLPAEEGVKKTILE 254


>gi|242052939|ref|XP_002455615.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
 gi|241927590|gb|EES00735.1| hypothetical protein SORBIDRAFT_03g014410 [Sorghum bicolor]
          Length = 129

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 89/115 (77%), Positives = 97/115 (84%), Gaps = 12/115 (10%)

Query: 91  HVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS 150
           HVLVDGK RTDKTY  GFMDV+SIPKT EN+R+LYDTKGRFRLHS+RDE+AKF       
Sbjct: 26  HVLVDGKFRTDKTY--GFMDVISIPKTGENYRILYDTKGRFRLHSVRDEDAKF------- 76

Query: 151 VQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 205
              GQKGIPY+NTYDGRTIRYPDPLIKANDTIK+ L  NKI DFIKFDVGN+VMV
Sbjct: 77  ---GQKGIPYLNTYDGRTIRYPDPLIKANDTIKIYLVTNKIVDFIKFDVGNVVMV 128


>gi|67621222|ref|XP_667747.1| 40S ribosomal protein S4 [Cryptosporidium hominis TU502]
 gi|54658904|gb|EAL37512.1| 40S ribosomal protein S4 [Cryptosporidium hominis]
          Length = 152

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/146 (58%), Positives = 106/146 (72%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PSSGPHK REC+PL ++LRNRLK+ALTY E   I+MQR + VDGKVRTD  +P 
Sbjct: 7   GVYAPRPSSGPHKLRECIPLAILLRNRLKFALTYTEAKYIVMQRLIKVDGKVRTDICFPL 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVVSI +  +N R++YDTKGRF    +  +EA FKLCKV  V  G KGIP   T D 
Sbjct: 67  GLMDVVSIDRVGKNIRIMYDTKGRFVPVQIDSKEAGFKLCKVTKVALGAKGIPTATTNDA 126

Query: 167 RTIRYPDPLIKANDTIKLDLEENKIT 192
           RT+RY  P +KANDT+K+DL   K++
Sbjct: 127 RTLRYIHPDVKANDTVKVDLATGKVS 152


>gi|414588932|tpg|DAA39503.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 143

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/106 (78%), Positives = 90/106 (84%)

Query: 127 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 186
           T G FRLH +RDE+ KFKLCKVRSVQFGQ GIPY+NTYDG TIRYPDPLIKAND IK+DL
Sbjct: 30  TTGCFRLHPIRDEDIKFKLCKVRSVQFGQTGIPYLNTYDGHTIRYPDPLIKANDNIKIDL 89

Query: 187 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           E NKI DF KFDVGN+VMVT GRN  RVG+IKN EKHKGSFE I +
Sbjct: 90  ETNKIMDFFKFDVGNVVMVTDGRNTERVGVIKNWEKHKGSFEVIDV 135


>gi|413948199|gb|AFW80848.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 225

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/93 (88%), Positives = 88/93 (94%)

Query: 138 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           D +A FKLCKVRS+QFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 118 DHKAHFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 177

Query: 198 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
           DVGN+VMVTGGRN GRVG+IKNREKHKGSFETI
Sbjct: 178 DVGNVVMVTGGRNTGRVGVIKNREKHKGSFETI 210


>gi|413925809|gb|AFW65741.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 140

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 80/92 (86%), Positives = 85/92 (92%)

Query: 141 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
            +FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVG
Sbjct: 41  VQFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVG 100

Query: 201 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 101 NVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 132


>gi|402468372|gb|EJW03536.1| hypothetical protein EDEG_02120 [Edhazardia aedis USNM 41457]
          Length = 274

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 141/228 (61%), Gaps = 2/228 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A  P+ GPH+ RE +PL L+L+     A T +E   IL ++ + V+G+VR+++ YP 
Sbjct: 25  GIFATNPNCGPHRKRESIPLALLLKKLNL-AATRKEEDYILSKKMIKVNGRVRSERKYPV 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DV++I  TN ++RLLY+   RF LH + ++EA  +LCKVRS +    G+PY+ T DG
Sbjct: 84  GLFDVLTIQPTNTSYRLLYNITKRFYLHKIDEKEANVRLCKVRSKKV-VNGVPYVFTEDG 142

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
              R+  P I   DT+K+D+  NK+ D IKF  G + MVT G N G VG+I   E H+  
Sbjct: 143 MCYRFLSPNIDKKDTLKIDVNSNKVIDSIKFSSGKLAMVTRGNNMGCVGVIVKIETHEIG 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
            + ++++D +G  FATR  NVF +G     W+SLP G G+K S  E++
Sbjct: 203 TDLVYLKDKVGRNFATRGSNVFVVGTTKDTWISLPHGLGVKTSEYEKS 250


>gi|38047855|gb|AAR09830.1| similar to Drosophila melanogaster RpS4, partial [Drosophila
           yakuba]
          Length = 150

 Score =  176 bits (447), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 101/126 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G+MD++++ KT E FRL+YD KGRF +H +  EEAK+KLCKV+  Q G KG+P++ T+DG
Sbjct: 85  GYMDIITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDG 144

Query: 167 RTIRYP 172
           RTIRYP
Sbjct: 145 RTIRYP 150


>gi|222064029|emb|CAQ86677.1| putative ribosomal protein L18 [Histomonas meleagridis]
          Length = 172

 Score =  176 bits (447), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 117/164 (71%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           MDV+ + K+NE FRLLYD KGRF  H +  +EA+FKL ++     G++G+P++  +DG T
Sbjct: 1   MDVIELGKSNEQFRLLYDAKGRFVAHKIEPKEAEFKLLRINKYFIGERGVPHLVAHDGHT 60

Query: 169 IRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
           +RY DP I+ NDT+K +L+ +++ +FIKF+ GN+ MVT G N GRVG+I++ E     F 
Sbjct: 61  LRYVDPSIRMNDTVKYNLKTHEVDNFIKFEKGNVAMVTSGGNVGRVGVIQSIEPQMVGFS 120

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIE 272
            +HI+DA G EFATR+ NVF IG+G  P +SLP+  G++ SI+E
Sbjct: 121 IVHIKDASGAEFATRIPNVFVIGQGENPLISLPRRAGVRPSILE 164


>gi|414589886|tpg|DAA40457.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 190

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 82/93 (88%), Positives = 87/93 (93%)

Query: 138 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           D +A FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKF
Sbjct: 83  DHKAHFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKF 142

Query: 198 DVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
           DVGN+VMVTGGRN  RVG+IKNREKHKGSFETI
Sbjct: 143 DVGNVVMVTGGRNTRRVGVIKNREKHKGSFETI 175


>gi|413933474|gb|AFW68025.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 387

 Score =  174 bits (442), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/103 (79%), Positives = 90/103 (87%)

Query: 130 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEEN 189
           +  + S   E   FKLCKVRSVQFGQKGIPY+NTYDGRTIRY DPLIKANDTIK++LE N
Sbjct: 277 QITMDSASVETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYHDPLIKANDTIKINLETN 336

Query: 190 KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           KI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 337 KIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 379


>gi|83773390|dbj|BAE63517.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 146

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 99/122 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APK S GPHK R+CLPLI+ +RNRLKYAL  REV AI+MQR + VDGKVRTD T+PA
Sbjct: 25  GTYAPKASPGPHKLRDCLPLIVFIRNRLKYALNGREVKAIMMQRLIQVDGKVRTDPTFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+ I KT ENFRL+YDTKGRF +H ++ EEA++KLCKV+ VQ G+ GIP++ T+D 
Sbjct: 85  GFMDVIGIEKTGENFRLIYDTKGRFTVHRIQAEEAEYKLCKVKRVQLGKGGIPFLVTHDA 144

Query: 167 RT 168
           RT
Sbjct: 145 RT 146


>gi|413925805|gb|AFW65737.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 167

 Score =  174 bits (440), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/100 (82%), Positives = 87/100 (87%)

Query: 133 LHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 192
           + S   E   FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI 
Sbjct: 60  MDSASVETNMFKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIM 119

Query: 193 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DFI FDVGN+VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 120 DFINFDVGNVVMVTGGRNTGRVGAIKNREKHKGSFETIHV 159


>gi|293336106|ref|NP_001169793.1| uncharacterized protein LOC100383683 [Zea mays]
 gi|223949565|gb|ACN28866.1| unknown [Zea mays]
 gi|224031705|gb|ACN34928.1| unknown [Zea mays]
          Length = 107

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 86/92 (93%)

Query: 141 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
           A F LCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 8   AFFMLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 67

Query: 201 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 68  NVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 99


>gi|344246835|gb|EGW02939.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 130

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 97/121 (80%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR + +DGKVRTD TYPAGFM+V+SI KT ENF L+YDTKGRF +H +  EEAK+KLCK
Sbjct: 1   MQRFIKIDGKVRTDITYPAGFMNVISIDKTGENFGLIYDTKGRFAVHRITPEEAKYKLCK 60

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           VR +  G KGI ++ T+D RTI+YPDPLIK NDTI++DLE  KI DFIKFD  N+ MVTG
Sbjct: 61  VRKIFVGTKGILHLMTHDARTIQYPDPLIKVNDTIQIDLETGKIIDFIKFDAANLCMVTG 120

Query: 208 G 208
           G
Sbjct: 121 G 121


>gi|444724744|gb|ELW65342.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 145

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/135 (62%), Positives = 98/135 (72%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP PS+GPHK + CLPLI+ LRNRLKYAL   EV  +  QR + V GKVRTD TYP GFM
Sbjct: 10  APGPSAGPHKLKGCLPLIIFLRNRLKYALAGDEVKKVCTQRFIKVAGKVRTDITYPVGFM 69

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
            V SI KT ENFRL+YDTKG F +H +  EEAK+KLCKVR +  G KG P++ T+   T 
Sbjct: 70  GVTSIDKTRENFRLIYDTKGHFTVHRVTPEEAKYKLCKVRKIFEGTKGTPHLVTHVAHTT 129

Query: 170 RYPDPLIKANDTIKL 184
           RYPDPLIK NDT +L
Sbjct: 130 RYPDPLIKVNDTFRL 144


>gi|413925806|gb|AFW65738.1| putative ribosomal protein S4 (RPS4A) family protein isoform 1 [Zea
           mays]
 gi|413925807|gb|AFW65739.1| putative ribosomal protein S4 (RPS4A) family protein isoform 2 [Zea
           mays]
 gi|413925808|gb|AFW65740.1| putative ribosomal protein S4 (RPS4A) family protein isoform 3 [Zea
           mays]
          Length = 99

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/90 (88%), Positives = 84/90 (93%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKLCKV SVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFI FDVGN+
Sbjct: 2   FKLCKVMSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFINFDVGNV 61

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           VMVTGGRN GRVG IKNREKHKGSFETIH+
Sbjct: 62  VMVTGGRNTGRVGAIKNREKHKGSFETIHV 91


>gi|413923241|gb|AFW63173.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 457

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/100 (80%), Positives = 88/100 (88%)

Query: 133 LHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 192
           + S   E   FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI 
Sbjct: 350 MDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIM 409

Query: 193 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 410 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 449


>gi|413923240|gb|AFW63172.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 442

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/100 (80%), Positives = 88/100 (88%)

Query: 133 LHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 192
           + S   E   FKLCKVRSVQFGQKGIPY+NTY+GRTIRYPD LIKANDTIK+DLE NKI 
Sbjct: 335 MDSASVETNMFKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDSLIKANDTIKIDLEINKIM 394

Query: 193 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DFIKFDV N+VMVTGGRN GRVG+IKNREKHKG+FETIH+
Sbjct: 395 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGNFETIHV 434


>gi|414884816|tpg|DAA60830.1| TPA: hypothetical protein ZEAMMB73_165124 [Zea mays]
          Length = 877

 Score =  170 bits (430), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 79/94 (84%), Positives = 85/94 (90%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 198
           E   FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE  KI +FIKFD
Sbjct: 776 ETNMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETYKIKNFIKFD 835

Query: 199 VGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           VGN+VMVT  RN GRVG+IKNREKHKGSFETIH+
Sbjct: 836 VGNMVMVTSRRNTGRVGVIKNREKHKGSFETIHV 869


>gi|300174368|gb|ADJ68152.1| putative RpS4 protein [Cecidostiba fungosa]
          Length = 122

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/121 (66%), Positives = 97/121 (80%)

Query: 46  LGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYP 105
           +G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YP
Sbjct: 2   VGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYP 61

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP++ T+D
Sbjct: 62  AGFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHD 121

Query: 166 G 166
           G
Sbjct: 122 G 122


>gi|300174364|gb|ADJ68150.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|300174370|gb|ADJ68153.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|300174372|gb|ADJ68154.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|401878838|gb|AFQ30711.1| putative RpS4, partial [Cecidostiba semifascia]
 gi|401878840|gb|AFQ30712.1| putative RpS4, partial [Cecidostiba semifascia]
 gi|401878842|gb|AFQ30713.1| putative RpS4, partial [Cecidostiba semifascia]
          Length = 121

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 96/120 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 61

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP++ T+DG
Sbjct: 62  GFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHDG 121


>gi|300174358|gb|ADJ68147.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|300174362|gb|ADJ68149.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|300174366|gb|ADJ68151.1| putative RpS4 protein [Cecidostiba fungosa]
 gi|300174374|gb|ADJ68155.1| putative RpS4 protein [Caenacis lauta]
          Length = 122

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 96/120 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 3   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 62

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP++ T+DG
Sbjct: 63  GFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTHDG 122


>gi|413936191|gb|AFW70742.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 210

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 81/90 (90%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDP IKANDTIK+DLE NKI DF KFDV N+
Sbjct: 83  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPFIKANDTIKIDLETNKIMDFFKFDVSNV 142

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           VMVTGGRN GRVG+IKN EKHKGSFE I +
Sbjct: 143 VMVTGGRNTGRVGVIKNWEKHKGSFEVIDV 172


>gi|457682|dbj|BAA04961.1| SS620 [Oryza sativa]
          Length = 90

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/89 (87%), Positives = 85/89 (95%)

Query: 75  KYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLH 134
           KYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKT EN+RLLYDTKGRFRL 
Sbjct: 1   KYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQ 60

Query: 135 SLRDEEAKFKLCKVRSVQFGQKGIPYINT 163
           S++DE+AKFKLCKVRSVQFGQKGI Y+N 
Sbjct: 61  SVKDEDAKFKLCKVRSVQFGQKGIRYLNN 89


>gi|413935851|gb|AFW70402.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 166

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 83/92 (90%)

Query: 141 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
           A F LCKVRSVQFGQKGIP +NTYD RTIRYPDPLIKANDTIK+DLE NKI DFIKFDVG
Sbjct: 67  AFFMLCKVRSVQFGQKGIPCLNTYDDRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVG 126

Query: 201 NIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N+VMV  GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 127 NVVMVISGRNTGRVGVIKNREKHKGSFETIHV 158


>gi|209737924|gb|ACI69831.1| 40S ribosomal protein S4 [Salmo salar]
          Length = 172

 Score =  164 bits (415), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 93/122 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT E+FRL+YD KGRF +H +  EEA++KLCKV+    G KG+P   T   
Sbjct: 85  GFMDVISIEKTGEHFRLIYDVKGRFTVHRITAEEAQYKLCKVKKNLMGTKGVPATQTPSS 144

Query: 167 RT 168
           R+
Sbjct: 145 RS 146


>gi|148691067|gb|EDL23014.1| mCG3585 [Mus musculus]
          Length = 157

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/118 (66%), Positives = 94/118 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLP I+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPPIIFLRNRLKYALTGDEVKEICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +  G KGI ++ T+
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGILHLVTH 142


>gi|414878754|tpg|DAA55885.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 325

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/100 (78%), Positives = 85/100 (85%)

Query: 133 LHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 192
           + S   E   FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DL+ NKI 
Sbjct: 218 MDSASVETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLQTNKIM 277

Query: 193 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DFIKFDV N+VMVTGGRN  RVG+IKNREKHKGSFETIH+
Sbjct: 278 DFIKFDVDNMVMVTGGRNTRRVGVIKNREKHKGSFETIHV 317


>gi|414867192|tpg|DAA45749.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 528

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 76/96 (79%), Positives = 82/96 (85%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKLCK+RSVQFGQKGIPY+NTYDG TI YPDPLIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 209 FKLCKMRSVQFGQKGIPYLNTYDGCTILYPDPLIKANDTIKIDLETNKIMDFFKFDVSNV 268

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGH 238
           VMVTGGRN GRVG+IKN EKHKGSFE +   DA  H
Sbjct: 269 VMVTGGRNTGRVGVIKNWEKHKGSFEQLAGPDAAQH 304


>gi|300174360|gb|ADJ68148.1| putative RpS4 protein [Cecidostiba fungosa]
          Length = 119

 Score =  164 bits (414), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 94/118 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 61

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           GFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP++ T+
Sbjct: 62  GFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIPFLVTH 119


>gi|225714340|gb|ACO13016.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
 gi|290462551|gb|ADD24323.1| 40S ribosomal protein S4-3 [Lepeophtheirus salmonis]
          Length = 265

 Score =  163 bits (413), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 131/229 (57%), Gaps = 1/229 (0%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G  AP+ SSGPHK  E +PL ++L  +LK A T +EV  IL  R + V+  VRTDK +
Sbjct: 23  SEGRYAPRISSGPHKKDESIPLRILLSKKLKIASTSKEVEYILRNRMIKVNNNVRTDKDF 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  D +++    +  RLLY+T G+F L  +  E++  K+ KVR     +  +PY+ T 
Sbjct: 83  PVGIFDTLTVGDNKDFLRLLYNTDGKFVLKRISKEDSMTKIVKVRETAIRKGNVPYVYTM 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DG   R+ D  IK N T+K+D E NKI  F+K  VG+IV    G+NRG VG +   E+++
Sbjct: 143 DGCCYRFCDQNIKKNFTVKIDFETNKIVKFLKLVVGSIVFTINGKNRGSVGKVIGIEENE 202

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPW-VSLPKGKGIKLSIIE 272
            S   I IQD  G EF+T   +   IG     + + L   KGIK SI+E
Sbjct: 203 YSENIIKIQDFNGREFSTIESSTICIGNKVDNYEIQLLDTKGIKKSILE 251


>gi|413921922|gb|AFW61854.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 184

 Score =  162 bits (409), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/91 (81%), Positives = 81/91 (89%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
            KLCKVRSVQFGQKGIPY+NTY+GRTIRYPDPLIKANDTIK+DLE NKI DF KFD+GN+
Sbjct: 87  LKLCKVRSVQFGQKGIPYLNTYNGRTIRYPDPLIKANDTIKIDLENNKIMDFFKFDIGNV 146

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQ 233
           VMVTGGRN   VG+IKN EKHKGSFE I +Q
Sbjct: 147 VMVTGGRNTRCVGVIKNWEKHKGSFEVIDVQ 177


>gi|19173414|ref|NP_597217.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
 gi|74621136|sp|Q8SRB9.1|RS4_ENCCU RecName: Full=40S ribosomal protein S4
 gi|19171003|emb|CAD26393.1| 40S RIBOSOMAL PROTEIN S4 [Encephalitozoon cuniculi GB-M1]
          Length = 268

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 3/228 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A  P+SGPHK  EC+PL  ++   L+YA  ++E+  IL ++++ V+G+VRT+  +P 
Sbjct: 25  GTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVNGRVRTNSHFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DVVSI KT E+FR+LY+   +F LH +  EEA ++L KV + ++  +GIPYI +  G
Sbjct: 85  GLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV-TKKYENQGIPYIVSSCG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +IR+ DP I    TIK+  E +K+ ++I      ++ V+ G+ RGRVG+I N    +G 
Sbjct: 144 LSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVGVI-NTISTQGK 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 273
                + D  G+ F+    +   IG+ S+  W++LPK +GI+ S +E+
Sbjct: 203 ETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEK 250


>gi|401827348|ref|XP_003887766.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
 gi|392998773|gb|AFM98785.1| 40S ribosomal protein S4 [Encephalitozoon hellem ATCC 50504]
          Length = 268

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 140/228 (61%), Gaps = 3/228 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A  P+SGPH+  EC+PL  ++   LKYA   +E+  IL  +++ V+GK RT+  +P 
Sbjct: 25  GTFALMPASGPHRKTECIPLGYLISRFLKYASNSKELAIILKGKNIKVNGKARTNSHFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DV+SI KT E+FR+LY+ + +F LH +  EEAK++L KV + ++  +GIPY+ +  G
Sbjct: 85  GLFDVISIEKTGEHFRVLYNVQKKFHLHRINSEEAKYRLAKV-TKKYKYQGIPYVVSSCG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +IR+ DP I+   TIK+  E +K+ ++I   V  IV V+ G+ RGR+GII   E  +G 
Sbjct: 144 LSIRFCDPAIEQEYTIKISNETSKVIEYIAPGVDKIVFVSRGKARGRIGIINTIEV-QGK 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 273
                + D  G+ F+    +   IG+ S+   ++LP  KGI+LS +E+
Sbjct: 203 DTVYVMTDFAGNTFSCTSKSCIIIGESSENILITLPSEKGIRLSELEK 250


>gi|401878898|gb|AFQ30741.1| putative RpS4, partial [Hobbya stenonota]
 gi|401878900|gb|AFQ30742.1| putative RpS4, partial [Hobbya stenonota]
 gi|401878902|gb|AFQ30743.1| putative RpS4, partial [Hobbya stenonota]
          Length = 114

 Score =  160 bits (406), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 90/113 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKVRTDPNYPA 61

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 159
           GFMDV++I KTNE FRL+YD KGRF +H +   EAK+KLCKVR VQ G KGIP
Sbjct: 62  GFMDVITIEKTNEFFRLIYDVKGRFTIHRITPVEAKYKLCKVRRVQTGPKGIP 114


>gi|449328827|gb|AGE95103.1| 40S ribosomal protein S4 [Encephalitozoon cuniculi]
          Length = 268

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 3/228 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A  P+SGPHK  EC+PL  ++   L+YA  ++E+  IL ++++ V+G+VRT+  +P 
Sbjct: 25  GTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILDEKNIKVNGRVRTNSHFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DVVSI KT E+FR+LY+   +F LH +  EEA ++L KV + ++  +GIPYI +  G
Sbjct: 85  GLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKV-TKKYENQGIPYIVSSCG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +IR+ DP I    TIK+  E +K+ ++I      ++ V+ G+ RGRVG+I N    +G 
Sbjct: 144 LSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSKGKARGRVGVI-NTISTQGK 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 273
                + D  G+ F+    +   IG+ S+  W++LPK +GI+ S +E+
Sbjct: 203 ETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEK 250


>gi|396081888|gb|AFN83502.1| 40S ribosomal protein S4 [Encephalitozoon romaleae SJ-2008]
          Length = 268

 Score =  160 bits (405), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 142/229 (62%), Gaps = 5/229 (2%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A  P+SGPH+  EC+PL  ++   LKYA   +E+  +L  +++ V+GKVRT+  +P 
Sbjct: 25  GTFALMPASGPHRKTECIPLGYLISRFLKYAGNSKELGIVLGGKNIKVNGKVRTNSHFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DV+SI KT E+FR+LY+T  +F LH +  +EA ++L KV + ++  +GIPY+ +  G
Sbjct: 85  GLFDVISIEKTGEHFRVLYNTHKKFHLHKISSQEAGYRLAKV-TKKYTSRGIPYVVSSCG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +IR+ DP I+   TIK+  E +K+ + I   V  +V V+ G+ RGR+G+I   +     
Sbjct: 144 LSIRFCDPAIEQEYTIKISNETSKVVEHIAPGVDKVVFVSRGKARGRIGVINTIDVQ--G 201

Query: 227 FETIHIQ-DALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEE 273
            ET+++  D  G+ F+    +   IG+ S+  W++LPK  GI+LS +E+
Sbjct: 202 KETVYVMTDFAGNTFSCTSKSCIIIGESSENIWITLPKENGIRLSELEK 250


>gi|194691268|gb|ACF79718.1| unknown [Zea mays]
          Length = 102

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/83 (87%), Positives = 81/83 (97%)

Query: 195 IKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGS 254
           IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D+LGH+FATR+GNVFTIGKG+
Sbjct: 10  IKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGN 69

Query: 255 KPWVSLPKGKGIKLSIIEEARKR 277
           KPWVSLPKGKGIKLSIIEE RKR
Sbjct: 70  KPWVSLPKGKGIKLSIIEEQRKR 92


>gi|444732233|gb|ELW72539.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 512

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 95/127 (74%), Gaps = 1/127 (0%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GP K RECL  I+ LRNRLK ALT  EV  I MQR + +DGKV TD TYPA
Sbjct: 25  GVFAPRPSTGP-KLRECLSFIIFLRNRLKNALTGDEVKKICMQRFIKIDGKVCTDITYPA 83

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+SI KT ENFRL+YDTKGRF +H    +EAK+KLCKVR +  G +GIP + T+D 
Sbjct: 84  GFMDVISIDKTGENFRLIYDTKGRFAVHRNTPQEAKYKLCKVRKIFVGTEGIPRLVTHDA 143

Query: 167 RTIRYPD 173
            TI YPD
Sbjct: 144 HTICYPD 150


>gi|414886273|tpg|DAA62287.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 287

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 78/89 (87%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 198
           E   FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLE NKI DFIKFD
Sbjct: 178 ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 237

Query: 199 VGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
           V N+VMVTGGRN  RVG+IKNREKHKGSF
Sbjct: 238 VDNMVMVTGGRNTERVGVIKNREKHKGSF 266


>gi|414886272|tpg|DAA62286.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 183

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 78/89 (87%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 198
           E   FKLCKVR VQFGQKGIPY+NTYDGR IRY DPLIKANDTIK+DLE NKI DFIKFD
Sbjct: 74  ETNMFKLCKVRFVQFGQKGIPYLNTYDGRAIRYLDPLIKANDTIKIDLETNKIMDFIKFD 133

Query: 199 VGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
           V N+VMVTGGRN  RVG+IKNREKHKGSF
Sbjct: 134 VDNMVMVTGGRNTERVGVIKNREKHKGSF 162


>gi|347524208|ref|YP_004781778.1| 30S ribosomal protein S4E, central domain containing protein
           [Pyrolobus fumarii 1A]
 gi|343461090|gb|AEM39526.1| Ribosomal protein S4E, central domain protein [Pyrolobus fumarii
           1A]
          Length = 255

 Score =  157 bits (398), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 12/228 (5%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   KP  GPH    C+PL++++R+ L YA T RE   I+ + H  VDG+VR D  +P 
Sbjct: 26  GVFTVKPRPGPHPLHRCIPLLVLVRDVLGYAKTAREARKIIAEGHFKVDGRVRRDYKFPV 85

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVV +  T E +R+L      F LH + DEEAK KLC++      + G   ++ +DG
Sbjct: 86  GFMDVVEVVDTGEKYRILPYPTRFFILHPISDEEAKVKLCRIEDKSTVKGGHVQLHCHDG 145

Query: 167 RT--IRYPDPLIKAND--------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGI 216
           R   IR  DP  +A++        T+K+ +   +I D++  +VGN+ +V GGRN GRVG 
Sbjct: 146 RNVLIRVSDP-TRADEAKPYRTLGTLKITIPGQEILDYVPLEVGNLAIVFGGRNVGRVGK 204

Query: 217 IKNREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           I   ++  G   +I  ++DA G +F T L  VF IGKG +P +SLP+G
Sbjct: 205 IVEIQRGMGRKRSIVTLEDARGEKFQTSLDYVFVIGKGDEPLISLPEG 252


>gi|160948194|emb|CAO94698.1| putative ribosomal protein S4 [Pomphorhynchus laevis]
          Length = 137

 Score =  157 bits (397), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/115 (62%), Positives = 90/115 (78%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ APKPS GPHK RECLPL++ LRNRL YALTY E   I  QR + VDGKVRTD  +P+
Sbjct: 23  GVFAPKPSQGPHKMRECLPLLIFLRNRLGYALTYDEARKICKQRDIKVDGKVRTDFRFPS 82

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 161
           GFMDV++I KTNENFRL+YD KGRF +H + +EEA +KLC+V + Q G KG+P++
Sbjct: 83  GFMDVITIDKTNENFRLIYDVKGRFVVHRITNEEASYKLCQVTNAQTGFKGVPFL 137


>gi|413943350|gb|AFW75999.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 336

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/90 (80%), Positives = 77/90 (85%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKLCKVRSVQFGQKGI Y+NTYDGRTIRYPD LIKANDTIK+DLE NKI DF KFDV N+
Sbjct: 227 FKLCKVRSVQFGQKGISYLNTYDGRTIRYPDLLIKANDTIKIDLETNKIMDFFKFDVSNV 286

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
            MVTGGRN  RVG+IKN EKHK SFE I +
Sbjct: 287 FMVTGGRNTRRVGVIKNWEKHKASFEVIDV 316


>gi|431897155|gb|ELK06417.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 155

 Score =  156 bits (394), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 5/128 (3%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK  ECLP I+ LRNRLKYALT  EV  I  QR + +DGKVRTD TYPA
Sbjct: 30  GMFAPRPSTGPHKLGECLPPIIFLRNRLKYALTGDEV-KICRQRFINIDGKVRTDMTYPA 88

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMD +SI KT ENFRL+Y TK RF +H +  EEA +KLCKVR +  G K +P    +D 
Sbjct: 89  GFMDAISINKTRENFRLVYGTKCRFAVHRITTEEADYKLCKVRKIFVGTKKVP----HDP 144

Query: 167 RTIRYPDP 174
           RTIRYP+P
Sbjct: 145 RTIRYPNP 152


>gi|303390290|ref|XP_003073376.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
 gi|303302522|gb|ADM12016.1| 40S ribosomal protein S4 [Encephalitozoon intestinalis ATCC 50506]
          Length = 268

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 136/227 (59%), Gaps = 3/227 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  A  P+SGPH+  EC+PL  ++   LKY+   +E+  IL  ++V V+GKVRT+  +P 
Sbjct: 25  GTFAMMPASGPHRKTECIPLGYLISRFLKYSSNSKELRIILDGKNVKVNGKVRTNSHFPV 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G  DVVSI KT E+FR+LY+   +F LH +   EA ++L KV + ++  + +PY+ +  G
Sbjct: 85  GLFDVVSIEKTGEHFRVLYNVHKKFHLHRINSSEASYRLAKV-TKKYESQNVPYVVSSCG 143

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +IR+ DP I    TIK+  E +K+ ++I+  V  +V V+ G+ RGR+G+I N    +G 
Sbjct: 144 LSIRFCDPAIDVGYTIKISNETSKVIEYIEPGVDKVVFVSSGKARGRIGVI-NTISIQGK 202

Query: 227 FETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIE 272
                + D  GH F+    +   IG+  +   ++LPK +GI+LS +E
Sbjct: 203 EVVYGMTDFAGHTFSCTSKSCILIGESEENILITLPKERGIRLSSLE 249


>gi|27363136|gb|AAO11521.1| 40S ribosomal protein S4 [Azumapecten farreri]
          Length = 105

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 85/105 (80%)

Query: 94  VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQF 153
           VDGKVRT K YPAGFMDV++I KTNENFRLLYD KGRF +H ++ EEAK+KLC+V+SV  
Sbjct: 1   VDGKVRTAKDYPAGFMDVIAIEKTNENFRLLYDVKGRFTVHRIKPEEAKYKLCRVKSVTV 60

Query: 154 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 198
           G KG+P + T+D RTIRYPDPL K NDT+ +D+   K+ +FIKFD
Sbjct: 61  GAKGVPMLTTHDARTIRYPDPLAKVNDTVMVDIATGKMKEFIKFD 105


>gi|414869427|tpg|DAA47984.1| TPA: hypothetical protein ZEAMMB73_281063 [Zea mays]
          Length = 282

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 80/86 (93%)

Query: 188 ENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNV 247
           EN+    IKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH++D++GH+FAT +GNV
Sbjct: 197 ENQNHGLIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSMGHQFATCMGNV 256

Query: 248 FTIGKGSKPWVSLPKGKGIKLSIIEE 273
           FTIGKG+KPWVSLPKG+GIKLSIIEE
Sbjct: 257 FTIGKGNKPWVSLPKGRGIKLSIIEE 282


>gi|300707086|ref|XP_002995766.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
 gi|239604977|gb|EEQ82095.1| hypothetical protein NCER_101255 [Nosema ceranae BRL01]
          Length = 263

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 135/231 (58%), Gaps = 6/231 (2%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S+G  A +  SGPHK   C+PL  VL+  L+YA   +E+  IL  ++++++GKV   + +
Sbjct: 23  SIGTYAIRTHSGPHKKDLCIPLAYVLQYFLEYAHNRKEIQIILKSKNIMINGKVIEKRKF 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTY 164
           P G  DV+S+ KTN ++R+L+     F LH + +EE+K+KL KV + +     +PYI T 
Sbjct: 83  PVGVGDVISVVKTNLHYRVLFGVDKSFILHQIDEEESKYKLAKVLNKKTMYNNVPYIFTN 142

Query: 165 DGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
           DG   +Y +P I  N+T+K+ L+   + D++ F  G IV V  G N GR+GIIK  +   
Sbjct: 143 DGACFKYCNPAIDINNTVKICLKTRTVVDYVSFREGGIVYVYTGENTGRIGIIKTIKD-- 200

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEEA 274
              +++  +D    +F   + ++  IG       +SLP+ KG++L+ +EE+
Sbjct: 201 ---KSLICEDFGSKQFEASISSLIAIGDSEDSLLISLPEEKGVRLTALEES 248


>gi|390986591|gb|AFM35815.1| hypothetical protein, partial [Oryza eichingeri]
          Length = 77

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/77 (92%), Positives = 75/77 (97%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           APKPSSGPHK+RECLPLIL+LRNRLKYALTYRE I+ILMQRHV+VDGKVRTDKTYPAGFM
Sbjct: 1   APKPSSGPHKARECLPLILILRNRLKYALTYREGISILMQRHVMVDGKVRTDKTYPAGFM 60

Query: 110 DVVSIPKTNENFRLLYD 126
           DVVSIPKT ENFRLLYD
Sbjct: 61  DVVSIPKTGENFRLLYD 77


>gi|402697608|gb|AFQ90989.1| X-linked ribosomal protein S4, partial [Draco sumatranus]
          Length = 193

 Score =  151 bits (382), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 101/184 (54%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LR RJKY LT  EV  I MQR + +DGKVRTD TYP 
Sbjct: 10  GVFAPRPSTGPHKXRECLPLIIFLRXRJKYXLTGDEVKKICMQRFIKIDGKVRTDITYPX 69

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDV+S  K  EB RL+ DTKGRF +H +  EEAK+KLCKVR +  G KGIP++     
Sbjct: 70  GFMDVISXEKXGEBXRLVXDTKGRFAVHRIXPEEAKYKLCKVRKIFVGTKGIPHLXXXXX 129

Query: 167 RTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
                                                         R+G+I N E+H GS
Sbjct: 130 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVITNXERHPGS 189

Query: 227 FETI 230
           F+ +
Sbjct: 190 FDVV 193


>gi|413942294|gb|AFW74943.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 307

 Score =  147 bits (372), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/77 (87%), Positives = 72/77 (93%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 231 FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 290

Query: 203 VMVTGGRNRGRVGIIKN 219
           VMVTGGRN GRVG+IKN
Sbjct: 291 VMVTGGRNTGRVGVIKN 307


>gi|429963313|gb|ELA42857.1| hypothetical protein VICG_00172 [Vittaforma corneae ATCC 50505]
          Length = 255

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 126/232 (54%), Gaps = 1/232 (0%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH     +PL  V+   L+ A T +EV  I   R + V+GK  T   +P G  
Sbjct: 17  AIRPLPGPHSKELSIPLKYVIARFLRVANTAKEVDYIASSRMIAVNGKEITSIKFPVGLF 76

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVV+I KTN++FRL ++   +F+LH +  +EAK ++ KV S ++    IP  +T DG   
Sbjct: 77  DVVTILKTNQHFRLYFNANRKFKLHKISSDEAKVRISKVVS-KYTNDSIPMTHTKDGYNF 135

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           ++ DP IK NDT+K+D+  N+I   + F+ G I  V  G N GR+G IK  ++     E 
Sbjct: 136 KFADPSIKINDTVKIDIATNRIVGHLPFEAGKIGYVFSGPNAGRIGTIKYIDRSPDGKEI 195

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
             +QD     F+  +  V  IG+ +   +S+ +  GI+L+  E +  + AA 
Sbjct: 196 AFLQDPREKPFSVSMDKVMVIGESNSLLISMDENDGIRLNAFEISNNKYAAN 247


>gi|413942295|gb|AFW74944.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 152

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/77 (87%), Positives = 72/77 (93%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKL KVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DL+ NKI DF KFDVGN+
Sbjct: 76  FKLFKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLKTNKIMDFFKFDVGNV 135

Query: 203 VMVTGGRNRGRVGIIKN 219
           VMVTGGRN GRVG+IKN
Sbjct: 136 VMVTGGRNTGRVGVIKN 152


>gi|91694809|gb|ABE41835.1| ribosomal protein S4 [Marmota monax]
          Length = 120

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/96 (71%), Positives = 79/96 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           GFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 85  GFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120


>gi|432114688|gb|ELK36527.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 269

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/105 (60%), Positives = 83/105 (79%)

Query: 177 KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDAL 236
           + NDTI++DLE ++ITD IKFD GN+ MVTGG N GR+G+I NRE+H GSF+ +H++DA 
Sbjct: 165 RVNDTIQIDLETDRITDCIKFDAGNLCMVTGGANLGRIGMITNRERHPGSFDGVHVKDAN 224

Query: 237 GHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           G+ FA +L N F  GKG+KPW+SLP+GKGI L+I EE  KR AA+
Sbjct: 225 GNSFAAQLSNSFVTGKGNKPWISLPRGKGICLTIAEERDKRLAAK 269


>gi|350594665|ref|XP_003483943.1| PREDICTED: 40S ribosomal protein S4, X isoform-like [Sus scrofa]
          Length = 221

 Score =  143 bits (360), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 89/120 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+ P+K RECLPLI+ LR+RLK A+   EV  I M R + +DGKV TD TYPA
Sbjct: 25  GIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEEVKEICMPRFIKIDGKVCTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT E+F L+YDTKG F +H +  EEAK+KLCKV  +  G +GIP++ T+DG
Sbjct: 85  GFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCKVGKIFMGIQGIPHLVTHDG 144


>gi|221039598|dbj|BAH11562.1| unnamed protein product [Homo sapiens]
          Length = 132

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 78/96 (81%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LRNRLKYALT  EV  I MQR + +DGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           G MDV+SI KT ENFRL+YDTKGRF +H +  EEAK
Sbjct: 85  GLMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK 120


>gi|118431012|ref|NP_147175.2| 30S ribosomal protein S4 [Aeropyrum pernix K1]
 gi|17380578|sp|Q9YF85.2|RS4E_AERPE RecName: Full=30S ribosomal protein S4e
 gi|116062338|dbj|BAA79311.2| 30S ribosomal protein S4e [Aeropyrum pernix K1]
          Length = 253

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 126/223 (56%), Gaps = 10/223 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A KP  GPH + + LPL+L++RN L YA T RE   ++ + H  VDG VR D  +P GFM
Sbjct: 29  AVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLISEGHFRVDGVVRKDYKFPVGFM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ +  T E FR+L      F+LH + +EE   K  ++ +    + G   +N +DGR I
Sbjct: 89  DVIEVVDTGEKFRMLPYPVKFFKLHPIPEEEGDLKPVRIENKTTVKGGHVQLNLHDGRNI 148

Query: 170 --RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
             R  DP      + +  DT+ + +   +I   IKF  G I ++ GGRN GRVG++K+ +
Sbjct: 149 LVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQ 208

Query: 222 KHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           K  G   T + ++DA G+ F T L  VF IG   +P +SLP+G
Sbjct: 209 KGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250


>gi|350594667|ref|XP_003483944.1| PREDICTED: hypothetical protein LOC100738356 [Sus scrofa]
          Length = 365

 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 89/120 (74%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+ P+K RECLPLI+ LR+RLK A+   EV  I M R + +DGKV TD TYPA
Sbjct: 25  GIFAPCPSTRPYKLRECLPLIIFLRHRLKGAIIGEEVKEICMPRFIKIDGKVCTDITYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           GFMDVVSI KT E+F L+YDTKG F +H +  EEAK+KLCKV  +  G +GIP++ T+DG
Sbjct: 85  GFMDVVSINKTGEDFCLIYDTKGCFAIHRITPEEAKYKLCKVGKIFMGIQGIPHLVTHDG 144


>gi|414868312|tpg|DAA46869.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 161

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/83 (80%), Positives = 74/83 (89%), Gaps = 2/83 (2%)

Query: 150 SVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGR 209
           S++   KGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIKFDVGN  MVTGGR
Sbjct: 73  SIETNMKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGN--MVTGGR 130

Query: 210 NRGRVGIIKNREKHKGSFETIHI 232
           N  RVG+IK+REKHKGSFETIH+
Sbjct: 131 NTRRVGVIKHREKHKGSFETIHV 153


>gi|158187822|gb|ABW23200.1| ribosomal protein rps4 [Eurythoe complanata]
          Length = 113

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 84/104 (80%)

Query: 120 NFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAN 179
           NFR +YD KGRF +H ++ EEAK+KLC+V + + G KG+P++ T+D RTIRYPDPLI+ N
Sbjct: 1   NFRPIYDVKGRFTVHRIQPEEAKYKLCRVGAWETGPKGVPFLVTHDARTIRYPDPLIRVN 60

Query: 180 DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           D++++D+   KI DFIKFD GN+ M+TGGRN GRVG++ +RE+H
Sbjct: 61  DSVQVDIAAGKIKDFIKFDSGNLCMITGGRNLGRVGLVTHRERH 104


>gi|304314266|ref|YP_003849413.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587725|gb|ADL58100.1| 30S ribosomal protein S4e [Methanothermobacter marburgensis str.
           Marburg]
          Length = 242

 Score =  141 bits (355), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 3/214 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     LPL++++R+ L  A   RE   I+    VLVDG+ R +  +P GFMDV
Sbjct: 31  KPSPGPHAIEASLPLMIIVRDILGVADNAREARKIINSGEVLVDGRPRKNYKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIP+T E +R+L D +GR  LH + +E A FKLCK+ +    + G   +N +DGR    
Sbjct: 91  VSIPRTGEVYRVLPDERGRLVLHPIGEENAGFKLCKIVNKTTIRGGKTQLNLHDGRNYLS 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 230
            D   +  D +KL + E +I + I F+ G++ +VTGGR+ G +G IK     + S   T 
Sbjct: 151 EDEF-RVGDVVKLAVPEQEILERIPFEKGSLGLVTGGRHTGEIGRIKKINITRSSMPNTA 209

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
            I+   G  F T    VF IGK  +  +SLP GK
Sbjct: 210 VIETEAGKTFLTLKDYVFVIGK-DESVISLPGGK 242


>gi|15678046|ref|NP_275160.1| 30S ribosomal protein S4 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3914912|sp|O26123.1|RS4E_METTH RecName: Full=30S ribosomal protein S4e
 gi|2621043|gb|AAB84516.1| ribosomal protein S4 [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 242

 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 3/214 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     LPL++++R+ LK A   RE   I+    VLVDG+ R +  +P GFMDV
Sbjct: 31  KPSPGPHAIENSLPLMIIVRDILKVADNAREARKIINSGEVLVDGRPRKNYKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIP+T + +R+L D +GR  LH + +E A FKLCK+ +    + G   +N +DGR    
Sbjct: 91  VSIPRTGDVYRVLPDERGRLVLHPIDEENAGFKLCKIVNKTTIKGGRTQLNLHDGRNYLS 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 230
            D   +  D +KL + E +I + I F+  ++ +VTGGR+ G +G IK     + S   T 
Sbjct: 151 DDEF-RVGDVVKLSIPEQEILERIPFEKDSLGLVTGGRHTGEIGKIKKINITRSSMPNTA 209

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
            I+   G  F T    VF IGK  +  +SLP GK
Sbjct: 210 VIETGAGKTFLTLKDYVFVIGK-DESVISLPGGK 242


>gi|389860661|ref|YP_006362901.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
 gi|388525565|gb|AFK50763.1| 30S ribosomal protein S4e [Thermogladius cellulolyticus 1633]
          Length = 250

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 10/221 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH +   LPL++V+RN L YA T RE   ++ + H  +DG+V  D  +P GFMDV
Sbjct: 28  RPSPGPHPTEYSLPLLIVVRNVLGYAETAREARRLISEGHFEIDGRVVRDYKFPVGFMDV 87

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           + I  T+E +R++           +  EEA FKLC++++    + G   +N +DGR   I
Sbjct: 88  LRIKPTDEYYRVVPVPTKVIGFVKIPKEEAAFKLCRIQNKTTVKGGHIQLNLHDGRNVLI 147

Query: 170 RYPDPLIKAND------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           R  DP     D      T++L L +NKI D++     N+V+++GGRN GRVG++K   + 
Sbjct: 148 RVNDPRNPVEDVYETLGTVQLSLADNKIVDYVPLAENNLVIISGGRNVGRVGLLKKVHRG 207

Query: 224 KGSFETIH-IQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            G   ++  I+D  G+ F T L  VF IG+  KP ++LP+ 
Sbjct: 208 MGVKRSVAVIEDKNGNLFQTSLSYVFVIGR-DKPLITLPEA 247


>gi|344257870|gb|EGW13974.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 137

 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 173 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           D LIK NDTI++DLE  KI  FIKFD GN+ MVTGG N GR G+I NRE+H GSF+ +H+
Sbjct: 6   DTLIKVNDTIQIDLETGKIAYFIKFDTGNLCMVTGGANLGRTGVITNRERHPGSFDVVHV 65

Query: 233 QDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQA 282
           +DA G+ FATR  N+  IGK +KPW+SLP+GKG  L+I EE R+  ++Q 
Sbjct: 66  KDANGNSFATRPSNILVIGKSNKPWISLPQGKGTCLTIAEE-RQEASSQT 114


>gi|269861121|ref|XP_002650275.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
 gi|220066289|gb|EED43777.1| SSU ribosomal protein S4E [Enterocytozoon bieneusi H348]
          Length = 270

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 124/237 (52%), Gaps = 7/237 (2%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G  A +P  GP+     +P+  +L N L  A T +E+  I+    VLV+ +   +   
Sbjct: 23  SNGKYAVRPLPGPYNKELSIPIHYILSNFLNVAHTAKEIHYIIKNEMVLVNNRKLLNHKS 82

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRS-------VQFGQKG 157
             G  DV+SI KTNE++RL+     +F+L  +  +EA+F+L KV S       +   +  
Sbjct: 83  VVGLFDVISIKKTNEHYRLILGINRKFKLQKISSDEARFRLTKVTSKSTDKLIIDGVETN 142

Query: 158 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           +P   T  G   RY +P I+ NDT+K+D+ ENKI +  KF+ G IV +  G N GRVG I
Sbjct: 143 VPMTRTLCGYNFRYANPEIEVNDTVKIDIVENKILEHYKFETGAIVFIYSGSNIGRVGTI 202

Query: 218 KNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
           K+ E        I + D   + F T L +   IGK     ++L + KGIKL+  E++
Sbjct: 203 KSIESQTNKKILIELVDGNMNHFTTLLSSAMVIGKDDSTLITLDESKGIKLTEYEKS 259


>gi|325958544|ref|YP_004290010.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
 gi|325329976|gb|ADZ09038.1| 30S ribosomal protein S4e [Methanobacterium sp. AL-21]
          Length = 241

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 4/214 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS+GPH   E LPL++V+R+ LK A   RE   I+    +LVDG+ R D  YP GFMDV
Sbjct: 31  KPSAGPHAIEESLPLLIVVRDILKVADNSREAKIIINNGDILVDGRARKDYKYPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + +PK+ + +R+L D KGR  LH + ++  +FKLC+V      + G   +N +DGR    
Sbjct: 91  IELPKSEKVYRVLPDHKGRLILHPISEKNREFKLCRVTDKTIIKGGKTQLNLHDGRNCIV 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 230
            +      D + +++ E K+TD IKF+ G + ++ GG++ G +G +K     + S   T+
Sbjct: 151 -EKQYSTGDVVVVEIPEQKVTDHIKFESGTVGLIIGGKHIGELGKVKQINITQSSKPNTV 209

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
            ++   G  F T    VF +GK  +P +SLP GK
Sbjct: 210 EVETDEGI-FLTLADYVFVLGK-EEPVISLPGGK 241


>gi|402582302|gb|EJW76248.1| 40S ribosomal protein S4, partial [Wuchereria bancrofti]
          Length = 135

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 78/111 (70%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+P  GPHK RE LPLIL LRNRLKYALTY E   I  QR + VDGKVRTD  +PA
Sbjct: 25  GVFAPRPRCGPHKLRESLPLILFLRNRLKYALTYNEARMICKQRLIKVDGKVRTDMRFPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKG 157
           GFMDV+ I KTNE FRLLYD KGR+  H + ++E   KLCK+     G KG
Sbjct: 85  GFMDVIRIEKTNETFRLLYDAKGRYATHRITEQEGNIKLCKIVRKCVGPKG 135


>gi|333987666|ref|YP_004520273.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
 gi|333825810|gb|AEG18472.1| 30S ribosomal protein S4e [Methanobacterium sp. SWAN-1]
          Length = 242

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 3/213 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS+GPH   E LPL++++R+ LK A   RE   I+    +LVDG+ R D  +P GFMDV
Sbjct: 31  KPSAGPHSIEESLPLLIIVRDILKVAENSREAKIIIGNGDILVDGRARKDYKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + IPK+ + +R+L + KG   L+ +  E A+FKLC++      + G   +N +DGR    
Sbjct: 91  IEIPKSEKVYRILPNHKGNLVLYPITKENAEFKLCRIEDKTTIKGGKTQLNLHDGRNCLV 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-FETI 230
            +   K+ D + +++ E  +T+ IKF+ G I ++TGG++ G +G IK     + S   T+
Sbjct: 151 -EKEYKSGDVVVVEVPEQTVTNHIKFESGTIGLITGGKHIGELGKIKEINVTRSSKSNTV 209

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            I+      F T    VF IGK  KP +SLP G
Sbjct: 210 LIETDDKKTFLTLTDYVFVIGK-DKPVISLPGG 241


>gi|124028167|ref|YP_001013487.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
 gi|189045349|sp|A2BMD1.1|RS4E_HYPBU RecName: Full=30S ribosomal protein S4e
 gi|123978861|gb|ABM81142.1| 30S ribosomal protein S4e [Hyperthermus butylicus DSM 5456]
          Length = 255

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 10/222 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PL++++R+ L YA T RE   ++ + H  +DG+VR +  YP GFMDV
Sbjct: 31  KPSPGPHPIERSIPLLILVRDVLGYAKTAREARKLIAEGHFKIDGRVRRNYKYPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           + I  T E +R+L      F LH +  EEA+FKL ++      + G   ++ +DGR   I
Sbjct: 91  IEIVDTGEFYRVLPYPTRFFTLHPISKEEAQFKLGRIEDKSTVKGGHIQLHLHDGRNVLI 150

Query: 170 RYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
           R  DP         K   T+K+ + E ++  +   +VG++V++ GGRN GRVG I + + 
Sbjct: 151 RVSDPTNPVEAKPYKTLGTVKISIPEQQLLGYAPLEVGSLVIIFGGRNVGRVGRIVSIQP 210

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKG 263
                  + I+DA G +  T L  VF I     +PW+SLP+G
Sbjct: 211 GMRRRGIVTIEDARGEKIQTSLEYVFVIAPPNEEPWISLPEG 252


>gi|432102968|gb|ELK30365.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 301

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/144 (53%), Positives = 91/144 (63%), Gaps = 23/144 (15%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPLI+ LR RLKYALT  EV  I MQR                
Sbjct: 25  GVFAPRPSTGPHKLRECLPLIIFLRIRLKYALTGDEVKKICMQR---------------- 68

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
            F+D     KT ENFRL+YDTKG F +H  R EEAK+KLCKVR +  G KGIP++ T+D 
Sbjct: 69  -FID-----KTGENFRLVYDTKGCFAVHR-RPEEAKYKLCKVRKIFVGTKGIPHLVTHDA 121

Query: 167 RTIRYPDPLIKANDTIKLDLEENK 190
           RTI YPDPLIK +  +    E  K
Sbjct: 122 RTICYPDPLIKLSQKLPEKWESVK 145


>gi|388281854|dbj|BAM15885.1| putative 40S ribosomal protein S4, partial [Pyrus pyrifolia var.
           culta]
          Length = 90

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/70 (87%), Positives = 66/70 (94%)

Query: 204 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           M  GG NRGRVG+IKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKG+KPW+SLPKG
Sbjct: 8   MGAGGWNRGRVGVIKNREKHKGSFETIHVQDASGHEFATRLGNVFTIGKGTKPWISLPKG 67

Query: 264 KGIKLSIIEE 273
           KGIKL+IIEE
Sbjct: 68  KGIKLTIIEE 77


>gi|296109308|ref|YP_003616257.1| ribosomal protein S4E, central domain protein [methanocaldococcus
           infernus ME]
 gi|295434122|gb|ADG13293.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
           infernus ME]
          Length = 245

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  G H   E LPL+L++R+ LKYA   +E   I+    +LVDG+VR ++  P GFMDV
Sbjct: 31  RPLPGAHPMSESLPLLLIVRDVLKYADNRKEAKKIIKMGKILVDGRVRKEEKLPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           VS+P+ NEN+R+L+D KGR +L+    E    KLCK+++    + G   +N +DGR   I
Sbjct: 91  VSLPEANENYRVLFDRKGRVKLYPT--ENPDVKLCKIKNKTVVKGGHIQLNLHDGRNIII 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +  DP      + K  DT+ + + + +I D I F+VG +  +TGG++ G +  I + EK 
Sbjct: 149 KVSDPTKAEEDVYKTGDTLLISIPDQEIKDHIPFEVGKLAYITGGKHVGEIAKIVDIEKK 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
                 + ++   G +F T    VF IG   KP + L
Sbjct: 209 PLHKTVVTLETPDGEKFKTVKDYVFVIG-DEKPVIKL 244


>gi|126465928|ref|YP_001041037.1| 30S ribosomal protein S4 [Staphylothermus marinus F1]
 gi|189045360|sp|A3DNB9.1|RS4E_STAMF RecName: Full=30S ribosomal protein S4e
 gi|126014751|gb|ABN70129.1| SSU ribosomal protein S4E [Staphylothermus marinus F1]
          Length = 252

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 14/225 (6%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A KPS GPH    C PL++++R+ L YA T RE   ++ + H  VDG+VR +  YP G M
Sbjct: 29  AVKPSPGPHPIERCFPLLIIVRDILGYAKTAREARKLISEGHFKVDGRVRKNYKYPVGLM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DV+ I  T E +R++        L  +  EEAK+KL ++ +    + G   +N +DGR  
Sbjct: 89  DVIEIVDTGETYRVIPVPVKVLGLIEIDKEEAKYKLSRIENKTTVKGGHIQLNLHDGRNV 148

Query: 169 -IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
            I+  DP      + K   T+++ + E +I ++I  D G +V+++GGRN GRVG  K   
Sbjct: 149 LIKVSDPKNPVEDIYKTLGTLQISIPEQQILNYIPLDEGTLVIISGGRNVGRVG--KVVS 206

Query: 222 KHKG---SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            HKG       + I+D  G++F T L  VF IGK  +P + LP+G
Sbjct: 207 IHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIKLPEG 250


>gi|312137088|ref|YP_004004425.1| 30S ribosomal protein S4e [Methanothermus fervidus DSM 2088]
 gi|311224807|gb|ADP77663.1| SSU ribosomal protein S4E [Methanothermus fervidus DSM 2088]
          Length = 240

 Score =  134 bits (336), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH + E LPL++++R+ L  A T RE   I+    +LVDG+ R D  +P GFMD+
Sbjct: 31  KPSPGPHSADESLPLLIIIRDVLGLADTAREAKRIIHHGEILVDGRPRKDHKFPVGFMDL 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + IPK ++++R+L D KGR  LH  ++EE ++KLCK+ +    + G   +N +DGR    
Sbjct: 91  LEIPKIDKSYRVLIDKKGRLYLHETKEEE-RYKLCKILNKTTVKGGKIQLNLHDGRN-HL 148

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKG-SFETI 230
            D   K  D IKL + + +I D I+F  GN+  +TGG++ G +  ++     K  +  T+
Sbjct: 149 VDNDFKTGDVIKLRIPDQEILDKIEFKEGNLAFITGGKHVGEIARVEKINIIKAPTPNTV 208

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            ++   G  F T    VF IG+  +P + LP+G
Sbjct: 209 ILKSRDGKMFETIHEYVFMIGE-KEPVIPLPEG 240


>gi|302348026|ref|YP_003815664.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
 gi|302328438|gb|ADL18633.1| 30S ribosomal protein S4e [Acidilobus saccharovorans 345-15]
          Length = 250

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 10/221 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH +   LPL++V+R+ LKYA T RE   I+    V VDGKV  D  +P G MD+
Sbjct: 31  KPSPGPHPADRSLPLLIVIRDLLKYAETAREATKIISSGQVKVDGKVVRDYKFPIGVMDI 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           V +P  N  +R++ D  G  RL  +  EEA  KL ++  V   + G   ++  DGR +  
Sbjct: 91  VELPSLNLYYRVVPDPTGTLRLVPISKEEASLKLLRIEGVTTLKGGHFQVHLSDGRNVLV 150

Query: 170 -----RYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                R P  L  K  D++ L++ E  + D I+F  G++ +V  GRN G++G I +  + 
Sbjct: 151 RVEDSRKPGQLPYKPLDSLVLNVPEGTVKDHIEFKEGSLALVVWGRNMGKLGKIVSVTRG 210

Query: 224 KGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            G   ++  +QD+ G+ F T L N++ +G+  KP V++ +G
Sbjct: 211 WGWDRSVASLQDSAGNSFETSLSNIYVVGR-DKPVVTVTQG 250


>gi|110456358|gb|ABG74702.1| ribosomal protein S4-like protein [Diaphorina citri]
          Length = 104

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 81/103 (78%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFA 241
           I+ ++  +KI D I+FD GN+ M+TGGRN GRVG + NRE+H GSF+ +H++D  GH FA
Sbjct: 1   IQYEIATSKIIDHIRFDTGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHVKDGNGHVFA 60

Query: 242 TRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           TRL NVF IGKG+K ++SLPKGKGIKL+I EE  KR AA+AA+
Sbjct: 61  TRLNNVFIIGKGTKAYISLPKGKGIKLTISEERDKRLAAKAAS 103


>gi|242398292|ref|YP_002993716.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
 gi|242264685|gb|ACS89367.1| 30S ribosomal protein S4e [Thermococcus sibiricus MM 739]
          Length = 248

 Score =  133 bits (335), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 12/222 (5%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +PS GPH  R  +PLI ++R+ L YA T REV  +L +  VLVDG+VR D  +P G M
Sbjct: 29  AVRPSPGPHDMRTSIPLIYIIRDYLGYAKTGREVRKVLNEEKVLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++ + +  + G   +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPITEEEAKLKPLRISNKRMVKGGNLQLNFHDGTNH 148

Query: 168 -------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKN 219
                  T    D   +  DT+ + + E +I + + F+VG  V V  G+N  RVG I++ 
Sbjct: 149 LVKLSSLTDETKDSF-RTADTVLVKVPEREIVEVVPFEVGAFVFVVQGKNVARVGKIVEV 207

Query: 220 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           R    G  + + I+D  G  F T     F +GK  +P +SLP
Sbjct: 208 RHFPGGWPDVVTIEDRDGELFDTLKDYAFVLGK-EEPRISLP 248


>gi|333910781|ref|YP_004484514.1| 30S ribosomal protein S4 [Methanotorris igneus Kol 5]
 gi|333751370|gb|AEF96449.1| 30S ribosomal protein S4e [Methanotorris igneus Kol 5]
          Length = 244

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 118/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  GPH   E LPL+L++R+ LKYA   RE   I+    +LVDG+ R +  +P G MDV
Sbjct: 31  RPLPGPHAMNESLPLLLIVRDILKYADNAREAKKIIKMGKILVDGRKRKEHKFPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           VSIP TNE+FR L+D KGR  L     E    KLC++R+    + G   +N +DGR   I
Sbjct: 91  VSIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIRNKTVVKGGHIQLNLHDGRNHLI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           R  DP      + K  D I + + E +I   I F+VG +  +TGG++ G    I + EK 
Sbjct: 149 RVSDPTKAEEDVYKTGDVILMGIPEQEIKAHIPFEVGKLAYITGGKHIGEFAKIVDIEKR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + I +++A G +F T    VF +G   +P + L
Sbjct: 209 ILYPDIITLENADGEKFKTIKDYVFVVG-DEEPIIKL 244


>gi|195552762|ref|XP_002076537.1| GD17639 [Drosophila simulans]
 gi|194202148|gb|EDX15724.1| GD17639 [Drosophila simulans]
          Length = 145

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 76/96 (79%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYAL   EV  I+MQR V VDGKVRTD TYPA
Sbjct: 25  GVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           G+MDV+++ KT E FRL+YD KGRF +H +  EEAK
Sbjct: 85  GYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120


>gi|223477731|ref|YP_002582376.1| 30S ribosomal protein S4e [Thermococcus sp. AM4]
 gi|214032957|gb|EEB73785.1| SSU ribosomal protein S4e [Thermococcus sp. AM4]
          Length = 243

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +PS GPH  +  +PL+ ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPSPGPHNMQTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             ++   D   K + TI + + E +I + I F+VG  V VT G+N  R G I++ R    
Sbjct: 149 LVSLAEKDSF-KTSYTIIMKVPEREIVEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G +F T     F +GK  KP +SLP
Sbjct: 208 GWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243


>gi|414868034|tpg|DAA46591.1| TPA: hypothetical protein ZEAMMB73_160801 [Zea mays]
          Length = 956

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/70 (85%), Positives = 63/70 (90%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
           FKLCKVRSVQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DF KFDVGN+
Sbjct: 886 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFFKFDVGNM 945

Query: 203 VMVTGGRNRG 212
           VMVT G   G
Sbjct: 946 VMVTAGGTPG 955


>gi|297527395|ref|YP_003669419.1| 30S ribosomal protein S4E, central domain-containing protein
           [Staphylothermus hellenicus DSM 12710]
 gi|297256311|gb|ADI32520.1| Ribosomal protein S4E, central domain protein [Staphylothermus
           hellenicus DSM 12710]
          Length = 252

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 14/225 (6%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A KPS GPH +  C PL++V+R+ L YA T RE   ++ + H  VDG++R +  YP G M
Sbjct: 29  AVKPSPGPHPTERCFPLLIVVRDILGYAKTAREARKLISEGHFKVDGRIRKNYKYPVGLM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DV+ I  T + +R++        L  +  EEAK+KL ++ +    + G   +N +DGR  
Sbjct: 89  DVIEIVDTGQTYRVIPVPVKVLGLIEIDKEEAKYKLSRIENKTTVKGGHIQLNLHDGRNV 148

Query: 169 -IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
            I+  DP      + K   T+++ + E +I ++I  + G +V+++GGRN GRVG  K   
Sbjct: 149 LIKVGDPKNPVEDIYKTLGTLQITIPEQQILNYIPLEEGMLVIISGGRNVGRVG--KVVS 206

Query: 222 KHKG---SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
            HKG       + I+D  G++F T L  VF IGK  +P + LP+G
Sbjct: 207 IHKGIRRHRSIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIKLPEG 250


>gi|408381909|ref|ZP_11179456.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
 gi|407815357|gb|EKF85942.1| 30S ribosomal protein S4e [Methanobacterium formicicum DSM 3637]
          Length = 241

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 117/213 (54%), Gaps = 2/213 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     LPL++++R+ LK A   RE   I+    VLVDG+ R D  +P GFMDV
Sbjct: 31  KPSPGPHSIEGSLPLLVIVRDILKIADNAREARIIINTGEVLVDGRARKDYKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + +PK+ + +R++ D KG   LH + + + +FKLC++      + G   +N +DGR    
Sbjct: 91  IQLPKSGKAYRVVPDEKGELVLHPIEEGDTQFKLCRIEDKVTIKGGKTQLNLHDGRNYLT 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +   K  D + L++ + +I D IKF+ G I ++TGG++ G  G +K     + S     
Sbjct: 151 EEDY-KTGDVVLLNVPDQEIKDTIKFEDGAIGLITGGKHIGEKGTVKEINITRSSMPNTV 209

Query: 232 IQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
           + +     F T    VF +GK  KP +SLP G+
Sbjct: 210 LIETDETTFQTLQEYVFVLGK-DKPVISLPGGQ 241


>gi|407081049|gb|AFS89697.1| ribosomal protein S4, partial [Plutella xylostella]
          Length = 92

 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/92 (63%), Positives = 73/92 (79%)

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
           YPDPLIK ND+I+LD+   +I D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +
Sbjct: 1   YPDPLIKVNDSIQLDIATCRIMDIIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIV 60

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           HI+D  GH FATRL NVF IGKG+K ++SLP+
Sbjct: 61  HIKDTTGHTFATRLNNVFIIGKGTKAYISLPR 92


>gi|62002191|gb|AAX58703.1| 40S ribosomal protein S4 [Hydractinia echinata]
          Length = 91

 Score =  131 bits (329), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/90 (63%), Positives = 73/90 (81%)

Query: 154 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGR 213
           G+K +PYI T+D RTIRYPDP IK NDT+ +D++  K+TDFIKFD GN VMV GGRN GR
Sbjct: 2   GKKSVPYIVTHDARTIRYPDPSIKINDTVVIDVKTGKVTDFIKFDTGNTVMVIGGRNTGR 61

Query: 214 VGIIKNREKHKGSFETIHIQDALGHEFATR 243
           VGII +RE+H  S++ +HI+DA G++FATR
Sbjct: 62  VGIITHRERHASSYDIVHIKDAAGNQFATR 91


>gi|288560121|ref|YP_003423607.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
 gi|288542831|gb|ADC46715.1| ribosomal protein S4e Rps4e [Methanobrevibacter ruminantium M1]
          Length = 244

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 2/210 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP+ G H   + LPL++++R+ L  A   RE   ++   +VL+DG+ + D  +P GFMD+
Sbjct: 31  KPAPGTHAINDSLPLLVIIRDILGIADNSREAKRLINTGNVLIDGRAKKDYKFPVGFMDI 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPKT EN+R+L DTKGR  LH +  E+A+FKL K+ +    + G   +N +DGR +  
Sbjct: 91  LSIPKTGENYRILLDTKGRLTLHPISAEDAEFKLAKIVNKSTIKGGKTQLNLHDGRNVIV 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-FETI 230
            +    A D + L++ E +I +  +F    +V+VTGG++ G +G I+     + S   T+
Sbjct: 151 EEDNYSAYDVVCLNIPEQEIKENFEFGEDVVVLVTGGKHTGELGKIQEVIVDQSSKANTV 210

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
            I+ A    F T     F IGK  +P + L
Sbjct: 211 IIEKANKDTFLTLKDYAFVIGK-DEPAIDL 239


>gi|375083281|ref|ZP_09730307.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
 gi|374742012|gb|EHR78424.1| 30S ribosomal protein S4e [Thermococcus litoralis DSM 5473]
          Length = 248

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 123/222 (55%), Gaps = 12/222 (5%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +PS GPH  +  +PLI ++R+ L YA T RE   IL +  VLVDG+VR D  +P G M
Sbjct: 29  AVRPSPGPHNMKTSIPLIYIIRDYLGYAKTGREARKILNEGKVLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+  +  G+  LH + +EEAK K  ++ + +  + G   +N +DG   
Sbjct: 89  DVVSIPETGEHYRVFPNRIGKLILHPISEEEAKIKPLRINNKRMVKGGNLQLNFHDGTNH 148

Query: 168 -------TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKN 219
                  T    D   K +DT+ + + E +I + + F++G  V V  G+N  RVG I++ 
Sbjct: 149 LIKLSSLTDETKDQF-KTSDTVLMKVPEREIVEVLSFEIGAYVFVVQGKNVARVGKIVEV 207

Query: 220 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           R    G  + + I+D  G  F T     F +GK  +P +SLP
Sbjct: 208 RHFPGGWPDVVTIEDKEGELFDTLKDYAFVLGK-EEPKISLP 248


>gi|57641464|ref|YP_183942.1| 30S ribosomal protein S4e [Thermococcus kodakarensis KOD1]
 gi|73919021|sp|Q5JJG0.1|RS4E_PYRKO RecName: Full=30S ribosomal protein S4e
 gi|57159788|dbj|BAD85718.1| SSU ribosomal protein S4E [Thermococcus kodakarensis KOD1]
          Length = 243

 Score =  130 bits (327), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +PS GPH  +  +PLI ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPSPGPHSMKTSIPLIYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGAKVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             ++   D   K + T+ + + E +I   + F+VG  V VT G+N  R G I++ R+   
Sbjct: 149 LVSLAEKD-AYKTSYTVIMQVPERQIVKVLPFEVGAYVFVTQGKNVARKGKIVEVRQFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G  F T     F IGK  KP +SLP
Sbjct: 208 GWPDVVTIEDENGELFDTLKEYAFVIGK-DKPEISLP 243


>gi|119595939|gb|EAW75533.1| hCG2043550 [Homo sapiens]
          Length = 157

 Score =  130 bits (326), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 73/96 (76%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP PS+ PH  RECLPLI+ LRNRLKY LT  EV  I MQR + ++GKVRTD TY A
Sbjct: 25  GVFAPHPSTSPHNLRECLPLIIFLRNRLKYVLTGNEVKKICMQRFIKINGKVRTDITYSA 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           GFMDV SI K+ ENFRL+YDTKGRF +H +  EEAK
Sbjct: 85  GFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAK 120


>gi|315229869|ref|YP_004070305.1| 30S ribosomal protein S4e [Thermococcus barophilus MP]
 gi|315182897|gb|ADT83082.1| SSU ribosomal protein S4e [Thermococcus barophilus MP]
          Length = 248

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 121/222 (54%), Gaps = 12/222 (5%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +  +LVDGK R D  +P G M
Sbjct: 29  AVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGKARKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFK--------LCKVRSVQFG-QKGIPY 160
           DVVSIP+T E++R+L +  G+  LH + +EEAK K        + K  ++Q G   G  Y
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPLRITRKVMVKGGNLQIGFHDGTNY 148

Query: 161 INTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKN 219
           +      T    D   K + T+ + + E +IT+ + F++G  V VT G+N  R+G I++ 
Sbjct: 149 LVKLSSLTDEVKD-RFKTSYTVFMKMPEREITEILPFEIGAYVFVTQGKNVARIGKIVEV 207

Query: 220 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           R    G  + + I+D  G  F T     F IGK  KP +SLP
Sbjct: 208 RHFPAGWPDVVTIEDQEGELFDTLKEYAFVIGK-DKPGISLP 248


>gi|240104047|ref|YP_002960356.1| 30S ribosomal protein S4e [Thermococcus gammatolerans EJ3]
 gi|239911601|gb|ACS34492.1| SSU ribosomal protein S4E (rps4E) [Thermococcus gammatolerans EJ3]
          Length = 243

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  +  +PLI ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHSMQTSIPLIYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRINNKRMVKGARVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             ++   D   + + TI + + E +I + I F+VG  V VT G+N  R G I++ R    
Sbjct: 149 LVSLAEKDSF-RTSYTIIMKVPEREIIEVIPFEVGAYVFVTQGKNVARKGRIVEVRHFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G +F T     F +GK  KP +SLP
Sbjct: 208 GWPDVVTIEDESGEKFDTLKEYAFVVGK-EKPEISLP 243


>gi|337283657|ref|YP_004623131.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
 gi|334899591|gb|AEH23859.1| 30S ribosomal protein S4e [Pyrococcus yayanosii CH1]
          Length = 248

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 10/221 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  +  +PL+ ++R+ L YA T RE   IL +  +LVDGKVR D  +P G M
Sbjct: 29  AVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGKVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++R+ +  + G   +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKIKPFRIRNKRMVKGGNLQLNLHDGSNH 148

Query: 169 -IRYPD------PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNR 220
            IR              +DT+ + + E +I + + F+VG  V VT G+N  R G I++ R
Sbjct: 149 LIRLSSLTDETKDRYHTSDTLIMRVPEREIIEVLPFEVGAYVFVTQGKNVARKGRIVEIR 208

Query: 221 EKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
               G  + + I+D  G  F T     F +GK S P +SLP
Sbjct: 209 HFPMGWPDVVTIEDEEGELFDTLKEYAFVVGKDS-PRISLP 248


>gi|449707481|gb|EMD47134.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
          Length = 112

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 72/96 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 7   GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AK
Sbjct: 67  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102


>gi|84489695|ref|YP_447927.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
 gi|121729294|sp|Q2NFW9.1|RS4E_METST RecName: Full=30S ribosomal protein S4e
 gi|84373014|gb|ABC57284.1| 30S ribosomal protein S4e [Methanosphaera stadtmanae DSM 3091]
          Length = 241

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 2/209 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K S+GPH   E +PL++VLR+ L  A   RE   IL    VLVDG  R +  +P GFMDV
Sbjct: 31  KTSAGPHALEESIPLVMVLRDILGLAANSREAKIILNNSDVLVDGIPRKNHRFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPK N+ FR+L D KGR  L  + ++++ FKL K+      + G   +N   GR I  
Sbjct: 91  ISIPKINKTFRVLQDYKGRLVLKEIEEKDSTFKLVKILGKTTIKGGKTQLNLEGGRNI-I 149

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            D   K  D + L++ E KI+D IKF+ G + ++TGG++   VG I   +  + S     
Sbjct: 150 ADDDYKTGDVLLLNIPEQKISDSIKFEEGALGLITGGKHISEVGKIDEIKITQSSKSNTV 209

Query: 232 IQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           + +     F T    VF +G+  KP +SL
Sbjct: 210 LMETEEGSFLTLARYVFVVGQ-DKPVISL 237


>gi|386001173|ref|YP_005919472.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
 gi|357209229|gb|AET63849.1| 30S ribosomal protein S4e [Methanosaeta harundinacea 6Ac]
          Length = 211

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K   GPH  +  +PL++V+R+ L      RE   +L +  VLVDGK R D  +P G  DV
Sbjct: 3   KTRPGPHSEKGSIPLVVVVRDLLGLVDNSREAKRVLHEGGVLVDGKARKDLNFPVGIFDV 62

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +S+P  ++NFRLL D KGRF LH L   EA+ KLC++      Q G   +N  DG  I  
Sbjct: 63  ISVPALDKNFRLLTDAKGRFNLHELEAGEAR-KLCRIEKKTVLQGGKTQLNLNDGTNILA 121

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
                  +  I L + + +I+D I+F  GN+ MV GG + G VG IK  E  K S     
Sbjct: 122 EGDYTTRSSVI-LSIPDKEISDVIEFKEGNLAMVVGGTHSGEVGTIKVIEVVKSSRPNRV 180

Query: 232 IQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           I      EF T + +VF IG+  KP + L
Sbjct: 181 IISG-KEEFETTVDHVFMIGR-DKPAIKL 207


>gi|449703142|gb|EMD43643.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
 gi|449709756|gb|EMD48960.1| 40S ribosomal protein S4 X [Entamoeba histolytica KU27]
          Length = 106

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 72/96 (75%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPH  +ECLPLIL+LRNRL YAL  REV  I+  R + +DGK+RTD  YP 
Sbjct: 7   GTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIVKNRTIKIDGKIRTDTRYPV 66

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAK 142
           GFMDV+SIP+T ENFRL+Y+TK RF L  L  E+AK
Sbjct: 67  GFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAK 102


>gi|410721705|ref|ZP_11361035.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
 gi|410598451|gb|EKQ53024.1| ribosomal protein S4E [Methanobacterium sp. Maddingley MBC34]
          Length = 241

 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 2/213 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     LPL++++R+ LK A   RE   I+    +LVDG++R D  +P GFMDV
Sbjct: 31  KPSPGPHSIEGSLPLLVIVRDILKIADNAREARIIINNGEILVDGRIRKDYKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + +P + + +R++ + +G   LH + +   +FKLC++      + G   +N +DGR    
Sbjct: 91  IQLPTSGKAYRVVPNERGTLVLHPIEEGNTEFKLCRIEDKVTIKGGKTQLNLHDGRNYLT 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +   K  D + L++ + +I + IKF+ G I ++TGG++ G  G +K     + S     
Sbjct: 151 EEDY-KTGDVVVLNVPDQEIKETIKFEDGAIGLITGGKHIGEKGTVKEINITRSSMPNTI 209

Query: 232 IQDALGHEFATRLGNVFTIGKGSKPWVSLPKGK 264
           + +  G  F T    VF +GK  KP +SLP G+
Sbjct: 210 LIETDGTTFQTLQEYVFVLGK-DKPMISLPGGQ 241


>gi|342905996|gb|AEL79281.1| ribosomal protein S4e [Rhodnius prolixus]
          Length = 92

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 70/85 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RECLPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPA
Sbjct: 6   GVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTDPNYPA 65

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRF 131
           GFMDV++I KT E FRL+YD KGR+
Sbjct: 66  GFMDVITIEKTGEFFRLIYDVKGRY 90


>gi|288931522|ref|YP_003435582.1| ribosomal protein S4E, central domain protein [Ferroglobus placidus
           DSM 10642]
 gi|288893770|gb|ADC65307.1| Ribosomal protein S4E, central domain protein [Ferroglobus placidus
           DSM 10642]
          Length = 232

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 6/211 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH ++E +PL++++R+ L+ A T RE   I+    +LVDG  R D  +P G  DV
Sbjct: 24  KPSPGPH-NKEAVPLLVIVRDYLQLADTAREARRIIAAGEILVDGVPRKDYKFPVGLFDV 82

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VS+PK + N+R+++D KGR+    + D +   KL K+      + G   +N +DG  I  
Sbjct: 83  VSVPKLDLNYRIVFDEKGRYVPIEITDPD--LKLYKITGKTMVKGGRIQLNLFDGTNILA 140

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +   K  D+I + + E +I D +KF+ G +VMVTGG + G +GI+K  +  + S   + 
Sbjct: 141 SNEY-KTKDSILMKIPEKEIVDHLKFEEGALVMVTGGTHAGEIGILKEYKIVRSSAPNLV 199

Query: 232 IQDALGHEFATRLGNVFTIGKG--SKPWVSL 260
             +  G+EF T    VF IGK   +KP + L
Sbjct: 200 TIEVEGNEFTTIEDYVFVIGKKGETKPVIQL 230


>gi|15668645|ref|NP_247443.1| 30S ribosomal protein S4e [Methanocaldococcus jannaschii DSM 2661]
 gi|1710764|sp|P54039.1|RS4E_METJA RecName: Full=30S ribosomal protein S4e
 gi|1591170|gb|AAB98457.1| SSU ribosomal protein S4E [Methanocaldococcus jannaschii DSM 2661]
          Length = 244

 Score =  127 bits (319), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 118/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  G H   E LPL+L++R+ LKYA   RE   I+    VLVDG+VR ++  P G MDV
Sbjct: 31  RPLPGAHPMSESLPLLLIVRDILKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           VS+P  NEN+R+L+D KGR +L     E    KLCK+++    + G   +N +DGR   I
Sbjct: 91  VSLPDANENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRNIVI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +  DP      + K  DT+ + + E +I   I F+VG +  +TGG++ G    I   E+ 
Sbjct: 149 KVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G   +P + L
Sbjct: 209 GIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEPIIKL 244


>gi|256810634|ref|YP_003128003.1| 30S ribosomal protein S4e [Methanocaldococcus fervens AG86]
 gi|256793834|gb|ACV24503.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
           fervens AG86]
          Length = 244

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  G H   E +PL+L++R+ LKYA   RE   I+    VLVDG+VR ++  P G MDV
Sbjct: 31  RPLPGAHPMSESIPLLLIVRDILKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           VS+P  NEN+R+L+D KGR +L     E    KLCK+++    + G   +N +DGR   I
Sbjct: 91  VSLPDANENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRNIVI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +  DP      + K  DT+ + + E +I   I F+VG +  +TGG++ G    I + EK 
Sbjct: 149 KVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHIGDFARIVDIEKR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G   +P + L
Sbjct: 209 GIYPDIVTLENLEGDKFKTVKDYVFVVG-DEEPIIKL 244


>gi|289193204|ref|YP_003459145.1| ribosomal protein S4E, central domain protein [Methanocaldococcus
           sp. FS406-22]
 gi|288939654|gb|ADC70409.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
           sp. FS406-22]
          Length = 244

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  G H   E LPL+L++R+ LKYA   RE   I+    VLVDG+VR ++  P G MDV
Sbjct: 31  RPLPGAHPMSESLPLLLIIRDVLKYADNAREAKKIIKMGKVLVDGRVRKEEKLPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--TI 169
           VS+P+ +EN+R+L+D KGR +L     E    KLCK+++    + G   +N +DGR   I
Sbjct: 91  VSLPEADENYRVLFDRKGRIKLKPT--ENPDVKLCKIKNKTVIKGGHIQLNLHDGRNIVI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +  DP      + K  DT+ + + E +I   I F+VG +  +TGG++ G    I   E+ 
Sbjct: 149 KVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G   +P + L
Sbjct: 209 GIYPDIVTLENMDGEKFKTVKDYVFVVG-DEEPIIKL 244


>gi|284162448|ref|YP_003401071.1| 30S ribosomal protein S4E, central domain-containing protein
           [Archaeoglobus profundus DSM 5631]
 gi|284012445|gb|ADB58398.1| Ribosomal protein S4E, central domain protein [Archaeoglobus
           profundus DSM 5631]
          Length = 232

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH ++E +PL++V+R+ L+ A T RE   I+    +LVDG  R D  +P G  DV
Sbjct: 24  KPSPGPH-NKEAVPLLIVVRDYLQLADTAREARRIIASGEILVDGVPRKDYKFPVGLFDV 82

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAK-FKLCKVRSVQFGQKGIPYINTYDGRTIR 170
           + IPK N+++R+++D KGR+    + D+  K +K+    +++ G+     +N +DG  + 
Sbjct: 83  IKIPKLNKSYRMVFDEKGRYVPIEIEDDNLKLYKIVNKTTIKGGRI---QLNLFDGTNV- 138

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
             D   K  D+I +++ E KI D++ F++G +VM+TGG + G +G IK+ +  + S   +
Sbjct: 139 LGDNSFKTKDSILMEIPEKKIVDYLPFEIGALVMITGGTHAGEIGRIKDYKIVRSSSPNL 198

Query: 231 HIQDALGHEFATRLGNVFTIGK--GSKPWVSL 260
              +  G E  T    VF IGK    KP + L
Sbjct: 199 VTVEVEGRELTTIEDYVFVIGKKDDEKPVIDL 230


>gi|262401341|gb|ACY66573.1| ribosomal protein S4 [Scylla paramamosain]
          Length = 93

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/91 (65%), Positives = 74/91 (81%), Gaps = 1/91 (1%)

Query: 191 ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTI 250
           + D IKFD GN+ M+TGGRN GRVG I +RE+H GSF+ +H++DA+GH FATRL NVF I
Sbjct: 1   MKDIIKFDSGNLCMITGGRNLGRVGTIVSRERHAGSFDIVHVKDAVGHTFATRLNNVFVI 60

Query: 251 GKGSKPWVSLPKGKGIKLSIIEEARKRQAAQ 281
           GKG+K +VSLP+GKGIKLSI EE R R+ AQ
Sbjct: 61  GKGNKAYVSLPRGKGIKLSIAEE-RDRRLAQ 90


>gi|449471049|ref|XP_004153193.1| PREDICTED: 40S ribosomal protein S4-like, partial [Cucumis sativus]
          Length = 102

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/66 (89%), Positives = 62/66 (93%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPSSGPHKSRECLPLIL+LRNRLKYALTYREVIAILMQRHVLVD KVRTDKTYPA
Sbjct: 25  GAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPA 84

Query: 107 GFMDVV 112
           GFM ++
Sbjct: 85  GFMGML 90


>gi|341582050|ref|YP_004762542.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
 gi|340809708|gb|AEK72865.1| 30S ribosomal protein S4e [Thermococcus sp. 4557]
          Length = 243

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHSMRTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + ++EA  K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNKRMVKGAKVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             T+   D  + A+ T+ + + E ++ + + F+VG  V VT G+N  R G +++ R+   
Sbjct: 149 LVTMDEKDRYMTAS-TVLMKVPEREVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G  F T     F +GK  KP +SLP
Sbjct: 208 GWPDVVTIEDENGELFDTLKEYAFVVGK-EKPEISLP 243


>gi|320101354|ref|YP_004176946.1| 30S ribosomal protein S4 [Desulfurococcus mucosus DSM 2162]
 gi|319753706|gb|ADV65464.1| SSU ribosomal protein S4E [Desulfurococcus mucosus DSM 2162]
          Length = 252

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 20/226 (8%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PL++++RN L YA T RE   ++   H  VDGKVR D  +P G MDV
Sbjct: 31  KPSPGPHAIERSIPLLVLVRNVLGYAETAREARRLIAGGHFKVDGKVRKDYKFPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + + +T E +R++        L  +  EEA FKLC++ +    + G   +N +DGR +  
Sbjct: 91  IEVVETGELYRVIPVPTRVLGLVKIPREEASFKLCRIENKVTVKGGHIQLNLHDGRNL-- 148

Query: 172 PDPLIKAND-------------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
              L++ ND              +KL +   ++ D+I    G I +V+GGRN GRVG + 
Sbjct: 149 ---LVRVNDARNPVEDVYETLGAVKLSIPVQQLLDYIPLKEGVIAIVSGGRNVGRVGKVV 205

Query: 219 NREKHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           +  +    + +I  I+D  G+ F T L  +F IG   KP ++LP+G
Sbjct: 206 SIHRGMKRYRSIVTIEDRSGNRFQTSLDYIFPIGL-EKPLITLPEG 250


>gi|374635652|ref|ZP_09707246.1| Ribosomal protein S4E, central domain protein [Methanotorris
           formicicus Mc-S-70]
 gi|373561505|gb|EHP87738.1| Ribosomal protein S4E, central domain protein [Methanotorris
           formicicus Mc-S-70]
          Length = 244

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  GPH     LPL+L++R+ LKYA   RE   I+    +LVDG+ R +  +P GFMDV
Sbjct: 31  RPLPGPHAMDGSLPLLLIVRDILKYADNAREAKKIIKMGKILVDGRKRKEHKFPVGFMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           +SIP TNE+FR L+D KGR  L     E    KLC++++    + G   +N +DGR   I
Sbjct: 91  ISIPDTNEHFRALFDEKGRIVLRPT--ENPDVKLCRIKNKTVVKGGHIQLNLHDGRNHLI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           R  +P      + K  D + + + E +I   I F+VG +  +TGG++ G    I + EK 
Sbjct: 149 RVSNPTKAEEDVYKTGDVVLMGVPEQEIKAHIPFEVGKLAYITGGKHIGEFVKIVDIEKR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + I ++++ G +F T    VF IG   +P + L
Sbjct: 209 VFYPDIITLENSDGEKFKTIKDYVFVIG-DEEPIIKL 244


>gi|390938979|ref|YP_006402717.1| 30S ribosomal protein S4E, central domain-containing protein
           [Desulfurococcus fermentans DSM 16532]
 gi|390192086|gb|AFL67142.1| Ribosomal protein S4E, central domain protein [Desulfurococcus
           fermentans DSM 16532]
          Length = 252

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 10/223 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A KPS GPH     LPL++++R+ L YA T +E   ++ + +  +DG+VR D  +P G M
Sbjct: 29  AVKPSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DV+ I   N+ +R++        L  +  EEA FKLC++ +    + G   +N +DGR  
Sbjct: 89  DVIEIVGINKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRNV 148

Query: 169 -IRYPDPLIKANDT------IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
            IR  DP     DT      +KL +   +I D++    G I +V+GGRN GRVG I +  
Sbjct: 149 LIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIH 208

Query: 222 KHKGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           K    + +I  ++D  G++F T L  +F IG   KP + LP+G
Sbjct: 209 KGMRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250


>gi|444707815|gb|ELW48989.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 239

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 83/119 (69%)

Query: 51  PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 110
           P+ S+G +   +   L  + ++R KYALT   V  +  QR + +DGKVRTD  YPAGFMD
Sbjct: 25  PRWSAGAYAGGQREELWAMDKHRFKYALTGDGVKKVCTQRFIEIDGKVRTDIPYPAGFMD 84

Query: 111 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           V+SI K+ ENFRL+YDTKGRF +H +  EEAK+KL KVR +  G KGIP++ T+D RT+
Sbjct: 85  VISIDKSGENFRLIYDTKGRFAVHRITPEEAKYKLRKVRKIFEGTKGIPHLVTHDARTM 143


>gi|14591522|ref|NP_143603.1| 30S ribosomal protein S4e [Pyrococcus horikoshii OT3]
 gi|6647808|sp|O59430.1|RS4E_PYRHO RecName: Full=30S ribosomal protein S4e
 gi|3258198|dbj|BAA30881.1| 243aa long hypothetical 30S ribosomal protein S4 [Pyrococcus
           horikoshii OT3]
          Length = 243

 Score =  124 bits (311), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 9/218 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +   LVDGKVR D  +P G M
Sbjct: 29  AVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSIP+T E++R+L +  G+  LH + +EEA  K  ++R+ +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLVLHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDGTN- 147

Query: 170 RYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 223
            +  PL + ++     T+ + + E +I + + F+ G  V VT G+N  R G I++ ++  
Sbjct: 148 -HLIPLTEKDNYFTSYTVLMKVPEREIMEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFP 206

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
            G  + + I+D  G  F T     F +GK  KP +SLP
Sbjct: 207 MGWPDVVTIEDEEGELFDTLKEYAFVVGK-DKPKISLP 243


>gi|409096171|ref|ZP_11216195.1| 30S ribosomal protein S4e [Thermococcus zilligii AN1]
          Length = 243

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 5/216 (2%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH     +PL+ ++R+ L YA T RE   IL +  VLVDG+VR D  +P G M
Sbjct: 29  AVRPMPGPHSMGTSIPLLYIVRDYLGYAKTAREAKKILNEGKVLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DVVSIP+T E++R+L +  G+  LH + +EEAK K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEAKLKPFRITNKRMVKGSKVQLNLHDGSNH 148

Query: 169 -IRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKG 225
            + + +    + + T+ + + E +I + I F+VG  V VT G+N  R G +++ R+   G
Sbjct: 149 LVGFAEKDSFRTSYTVLMKVPEREIVEVIPFEVGAYVFVTQGKNVARRGKVVEIRQFPMG 208

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
             + + I+D  G +F T     F +GK  +P +SLP
Sbjct: 209 WPDVVTIEDENGEKFDTLKEYAFVLGK-DRPIISLP 243


>gi|261402344|ref|YP_003246568.1| 30S ribosomal protein S4e [Methanocaldococcus vulcanius M7]
 gi|261369337|gb|ACX72086.1| Ribosomal protein S4E, central domain protein [Methanocaldococcus
           vulcanius M7]
          Length = 244

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P  G H   E LPL++V+R+ LKYA   RE   I+    V VDG+VR ++  P G MDV
Sbjct: 31  RPLPGAHPMSESLPLLIVVRDLLKYADNGREAKKIIKMGKVFVDGRVRKEEKLPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           VS+P+ +EN+R+L+D KGR +L     E    KLCK+++    + G   +N +DGR   I
Sbjct: 91  VSLPEADENYRVLFDRKGRVKLKPT--ENPDVKLCKIKNKTVVKGGHIQLNLHDGRNVVI 148

Query: 170 RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           +  DP      + K  DT+ + + E +I   I F+VG +  +TGG++ G    I   E+ 
Sbjct: 149 KVSDPTKAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G   +P + L
Sbjct: 209 GIYPDIVTLENMEGEKFKTVKDYVFVVG-DEEPIIKL 244


>gi|310771952|emb|CBH28913.1| 40S RIBOSOMAL PROTEIN S4 [Anncaliia algerae]
          Length = 171

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 98/145 (67%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  AP P+ G H  RE +PL ++LR  LK A + +E++ +L ++ +LV+G VRTD TYP 
Sbjct: 25  GKYAPMPTVGSHPRRESIPLSILLRRYLKVAPSMKELVYVLGKKIILVNGVVRTDTTYPL 84

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV++I  TNE++R++YD   +F LH +  EE+  K+CKV   +  +K +PYI T DG
Sbjct: 85  GIMDVLTIQSTNEHYRVMYDVFKKFVLHKIDAEESNIKVCKVIKKKICKKNVPYIYTADG 144

Query: 167 RTIRYPDPLIKANDTIKLDLEENKI 191
            + RY DP IK ND++ +D++E K+
Sbjct: 145 YSFRYCDPKIKTNDSLIVDIKEMKV 169


>gi|212223224|ref|YP_002306460.1| 30S ribosomal protein S4e [Thermococcus onnurineus NA1]
 gi|212008181|gb|ACJ15563.1| SSU ribosomal protein S4E [Thermococcus onnurineus NA1]
          Length = 243

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  +  +PL+ ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHSMKTSIPLLYIVRDYLGYAKTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + ++EA  K  ++ + +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPITEKEANIKPLRISNKRMVKGAKVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
                  D  + A  T+ + + E +I + I F+VG  V VT G+N  R G +++ R+   
Sbjct: 149 LVAFSEKDRFMTAY-TVLMKVPEREIIEVIPFEVGAYVFVTQGKNVARKGKVVEVRQFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G  F T     F +GK  KP +SLP
Sbjct: 208 GWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243


>gi|432329001|ref|YP_007247145.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
 gi|432135710|gb|AGB04979.1| ribosomal protein S4E [Aciduliprofundum sp. MAR08-339]
          Length = 236

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 4/213 (1%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           APK S GPH +   +P+++VLR+ LK A   RE   IL  R + VDG+V TD  +P GFM
Sbjct: 24  APKISPGPHPAERAVPMLIVLRDMLKLANNRREAKKILNSRKIKVDGRVVTDIKFPIGFM 83

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV++I   ++N+R +YD  G  R+  +  + A++KL ++        G   +N +DGR I
Sbjct: 84  DVITIDDMDKNYRAVYDIYGNLRIVEIPKDNAEWKLVRIEDKHIVPGGKIQLNLHDGRNI 143

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
              +      D +K+ +   +I        G++ ++ GG++RGRV  IK     +G  + 
Sbjct: 144 LLDENKYHTKDVLKIKVPTQEIIAHYPMAEGSVAIIIGGKHRGRVAHIKEYVVVRGPQDN 203

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           + ++   G E  +R  NVF IG G KP +++P+
Sbjct: 204 M-VKFEEGFEVNSR--NVFVIGVG-KPEITIPE 232


>gi|390960782|ref|YP_006424616.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
 gi|390519090|gb|AFL94822.1| 30S ribosomal protein S4e [Thermococcus sp. CL1]
          Length = 243

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  +  +PL+ ++R+ L YA T RE   IL +  +LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHSMKTSIPLLYIVRDYLGYARTAREARKILNEGKILVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DV+SIP+T E++R+L +  G+  LH + ++EA  K  ++ + +  +     +N +DG   
Sbjct: 89  DVISIPETGEHYRVLPNRIGKLILHPISEKEANIKPLRISNKRMVKGAKVQLNLHDGSNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             TI   D  + A  T+ + + + ++ + + F+VG  V VT G+N  R G +++ R+   
Sbjct: 149 LVTIDEKDKYMTAY-TVLMKVPDREVIEVLPFEVGAYVFVTQGKNVARKGKVVEVRQFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G  F T     F +GK  KP +SLP
Sbjct: 208 GWPDVVTIEDENGELFDTLKEYAFVVGK-DKPEISLP 243


>gi|307595641|ref|YP_003901958.1| 30S ribosomal protein S4 [Vulcanisaeta distributa DSM 14429]
 gi|307550842|gb|ADN50907.1| Ribosomal protein S4E, central domain protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 247

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 13/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL L++R+ L+YA T RE   ++ +  + VDGKVR D  YP G MDV
Sbjct: 27  RPSPGPHPLAKSLPLALLVRDVLRYAKTLREARYVIGKGLIKVDGKVRRDYKYPVGLMDV 86

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V I  TNE +R++           +  EEA++KLC++ +    + G   +N +DGR I+ 
Sbjct: 87  VEIVPTNEVYRMVPHPTKFLWPVLISQEEARYKLCRIENKTMVKGGQIQLNLHDGRNIQL 146

Query: 172 P-------DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 223
           P       D L    D++ +D+ ENKI D++K ++G++ ++  G+N G  G I +  + +
Sbjct: 147 PYEEGSKYDTL----DSVLIDIAENKIVDYVKLELGSLGLIVDGKNVGYYGKITEIVQTY 202

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           +    T+ I    G E  T +  +F +GK  KP +++
Sbjct: 203 RKRESTVKIITNEGKEVRTIVDYLFAVGK-EKPLITI 238


>gi|289597181|ref|YP_003483877.1| ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
 gi|289534968|gb|ADD09315.1| Ribosomal protein S4E, central domain protein [Aciduliprofundum
           boonei T469]
          Length = 236

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 4/213 (1%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           APK S GPH + E +PL++VLR  L  A   RE   IL  R V VDG+V  D  +P GFM
Sbjct: 24  APKVSPGPHGAHESIPLLVVLREILGIASNKREAKKILNSRKVKVDGRVVRDVKFPIGFM 83

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+SI   N+++R +YD  G  R+  + ++ A++KL ++ +      G   +N +DGR I
Sbjct: 84  DVISIGDINKHYRAVYDVNGNMRIVEIPEDHAEWKLVRIENKSVVPGGKIQLNLHDGRNI 143

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
              +   K  D +K+ L   +I        G++ +VTGG +RGRV  IK     +   + 
Sbjct: 144 LLDENKYKTGDVLKIKLPTQEILSHYPLAEGSVAIVTGGTHRGRVAHIKEYVVVRSPQDN 203

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
           + ++   G E   R   VF IG G KP +++P+
Sbjct: 204 M-VRFEEGFEIPKRY--VFVIGVG-KPEITIPE 232


>gi|218884474|ref|YP_002428856.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
 gi|254764558|sp|B8D5V8.1|RS4E_DESK1 RecName: Full=30S ribosomal protein S4e
 gi|218766090|gb|ACL11489.1| 30S ribosomal protein S4e [Desulfurococcus kamchatkensis 1221n]
          Length = 252

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 10/221 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K S GPH     LPL++++R+ L YA T +E   ++ + +  +DG+VR D  +P G MDV
Sbjct: 31  KSSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--I 169
           + I   N+ +R++        L  +  EEA FKLC++ +    + G   +N +DGR   I
Sbjct: 91  IEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRNVLI 150

Query: 170 RYPDPLIKANDT------IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
           R  DP     DT      +KL +   +I D++    G I +V+GGRN GRVG I +  K 
Sbjct: 151 RVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIHKG 210

Query: 224 KGSFETI-HIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
              + +I  ++D  G++F T L  +F IG   KP + LP+G
Sbjct: 211 MRRYRSIVTLEDKQGNKFQTSLDYIFPIGV-EKPLIKLPEG 250


>gi|14520545|ref|NP_126020.1| 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
 gi|17369748|sp|Q9V1U8.1|RS4E_PYRAB RecName: Full=30S ribosomal protein S4e
 gi|5457761|emb|CAB49251.1| rps4E SSU ribosomal protein S4E [Pyrococcus abyssi GE5]
 gi|380741072|tpe|CCE69706.1| TPA: 30S ribosomal protein S4e [Pyrococcus abyssi GE5]
          Length = 243

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 9/218 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +   LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSIP+T E++R+L +  G+  LH + +EEA  K  ++R+ +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDGTN- 147

Query: 170 RYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 223
            +  PL + ++     T+ + + E +I + + F+ G  V VT G+N  R G I++ ++  
Sbjct: 148 -HLIPLSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKFP 206

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
            G  + + I+D  G  F T     F +G+  KP +SLP
Sbjct: 207 MGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPRISLP 243


>gi|148642809|ref|YP_001273322.1| 30S ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222445040|ref|ZP_03607555.1| hypothetical protein METSMIALI_00657 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350391|ref|ZP_05975808.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
 gi|189045354|sp|A5UL76.1|RS4E_METS3 RecName: Full=30S ribosomal protein S4e
 gi|148551826|gb|ABQ86954.1| ribosomal protein S4e [Methanobrevibacter smithii ATCC 35061]
 gi|222434605|gb|EEE41770.1| Ribosomal family S4e [Methanobrevibacter smithii DSM 2375]
 gi|288861174|gb|EFC93472.1| 30S ribosomal protein S4e [Methanobrevibacter smithii DSM 2374]
          Length = 242

 Score =  120 bits (300), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 4/210 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS+G H     L L LV+R+ LK A   RE   I+   +VLVDG+V  D  +P GFMD+
Sbjct: 31  KPSAGSHSIENSLSLTLVIRDILKLADNSREAKRIINSGNVLVDGRVIKDYKFPVGFMDI 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + IPKT E +R+L D KGR +L+ +  EE   KLCK+ +    + G   +N +DG+ +  
Sbjct: 91  IEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVII 148

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF-ETI 230
            +      D I L + +++I +  +   G  V++TGG++ G +G +     ++ S   TI
Sbjct: 149 DENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHTGELGTVSEIIVNESSNPNTI 208

Query: 231 HIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
            I+++   EF T     F +G+ + P +SL
Sbjct: 209 IIENSAKDEFLTLKDYAFVVGEDA-PAISL 237


>gi|332158011|ref|YP_004423290.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
 gi|331033474|gb|AEC51286.1| 30S ribosomal protein S4e [Pyrococcus sp. NA2]
          Length = 243

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 11/219 (5%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +   LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSIP+T E++R+L +  G+  LH + +EEA  K  ++R+ +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEEEANIKPLRIRNKRMVKGAKVQLNFHDGTNH 148

Query: 170 RYPDPLIKAND------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREK 222
             P       D      T+ + + E +I + + F+ G  V VT G+N  R G I++ ++ 
Sbjct: 149 LVP---FSEKDNYFTSYTVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKKF 205

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
             G  + + I+D  G  F T     F +G+  KP +SLP
Sbjct: 206 PMGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243


>gi|11499497|ref|NP_070738.1| 30S ribosomal protein S4e [Archaeoglobus fulgidus DSM 4304]
 gi|3914913|sp|O28366.1|RS4E_ARCFU RecName: Full=30S ribosomal protein S4e
 gi|2648630|gb|AAB89340.1| SSU ribosomal protein S4E (rps4E) [Archaeoglobus fulgidus DSM 4304]
          Length = 235

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH ++E +PL++++R+ L+ A T RE   I+    +LVDG VR D  +P G  DV
Sbjct: 27  KPSPGPH-NKEAIPLLVLVRDFLELADTGREARRIISAGEILVDGVVRKDYKFPVGLFDV 85

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+IPK  +++R+L+D KGR+    +  E+A  KL K+ +    + G   +N +DG  I  
Sbjct: 86  VTIPKLEKSYRILFDEKGRYIPKEV--EDADLKLYKITNKTLVRGGKVQLNLFDGTNILG 143

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +   K  D+I L + E ++ D +KF+ G +VM+TGG + G +G IK+ +  + S   + 
Sbjct: 144 SNDY-KTKDSILLRIPEKEVVDHLKFEEGALVMITGGTHAGEIGRIKSYKIVRSSAPNLV 202

Query: 232 IQDALGHEFATRLGNVFTIGK--GSKPWVSL 260
             +    +  T    VF +GK    KP + L
Sbjct: 203 TVEGEERDITTIEDYVFVVGKKDSDKPVIDL 233


>gi|389853105|ref|YP_006355339.1| 30S ribosomal protein S4e [Pyrococcus sp. ST04]
 gi|388250411|gb|AFK23264.1| RPS4, small subunit ribosomal protein S4e [Pyrococcus sp. ST04]
          Length = 243

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 9/218 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  +  +PL+ ++R+ L YA T RE   IL +   LVDGKVR D  +P G M
Sbjct: 29  AVRPRPGPHNMKTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DVVSIP+T E++R+L ++ G+  LH + +EEA  K  ++R+ +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNSIGKLILHPISEEEANIKPLRIRNKRMVKGAKIQLNFHDGTN- 147

Query: 170 RYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKH 223
            +  PL + ++     T+ + + + +I + + F+ G  V VT G+N  R G I+  +   
Sbjct: 148 -HLIPLSEKDNYFTSYTVLMKVPDREILEVLPFEKGAYVFVTQGKNVARKGRIVDIKRFP 206

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
            G  + + I+D  G  F T     F +G+  KP +SLP
Sbjct: 207 MGWPDVVTIEDEEGELFDTLKEYAFVVGR-DKPKISLP 243


>gi|444721894|gb|ELW62603.1| 40S ribosomal protein S4 [Tupaia chinensis]
          Length = 188

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 5/139 (3%)

Query: 147 KVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVT 206
           KVR +  G KGI ++ T+D  TI  PDPLIK N TI+ D++  K+TD I FD G++ MVT
Sbjct: 39  KVRQIFVGTKGILHLVTHDAPTICSPDPLIKVNTTIQTDVQTGKVTDCIVFDTGSLCMVT 98

Query: 207 GGRNRGRVGIIKNREKH-KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKG 265
           GG + GR+G++ +RE+     F+ +H++DA  + FATRL ++F IGK +KPW+S P    
Sbjct: 99  GGADLGRIGVLTSRERDILAFFDVVHVKDANDNSFATRLLSIFVIGKDNKPWISPPTSPW 158

Query: 266 IKLSIIEEARKRQAAQAAA 284
           +K     + R  Q  +A  
Sbjct: 159 LK----RQTRDWQPNRAVG 173


>gi|116755004|ref|YP_844122.1| 30S ribosomal protein S4e [Methanosaeta thermophila PT]
 gi|116666455|gb|ABK15482.1| SSU ribosomal protein S4E [Methanosaeta thermophila PT]
          Length = 233

 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 11/228 (4%)

Query: 39  LLTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKV 98
           L+    S  +  P+P  GPH + E LPL++V+R+ LK A   REV  IL +  VLVDG V
Sbjct: 13  LIPRKTSKWIATPRP--GPHSAEESLPLMVVVRDLLKLADNAREVKRILHEGGVLVDGTV 70

Query: 99  RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 158
           R D  +P G  DV+++P  N+ +R++  TKG F L  ++ +  + KL +V +    +   
Sbjct: 71  RRDARFPVGLFDVITVPALNKQYRMVKSTKGYFVLIEIQPDTPR-KLVRVENKTTLKGNR 129

Query: 159 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
             +N  DG  I   +  +   D++ + L E  I D IKF+VGN+ MVTGG + G  G IK
Sbjct: 130 MQLNLSDGSNI-IAEGDVGTGDSLLISLPERSIEDIIKFEVGNLAMVTGGSHTGMTGRIK 188

Query: 219 NREKHKGSFE---TIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           + +  + S     TI   D    +  T +  VF IG+ + P + L  G
Sbjct: 189 SVQIVRSSMPNRVTISTDDG---DIETIIDYVFVIGRDA-PVIELEAG 232


>gi|396468642|ref|XP_003838223.1| predicted protein [Leptosphaeria maculans JN3]
 gi|312214790|emb|CBX94744.1| predicted protein [Leptosphaeria maculans JN3]
          Length = 81

 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/81 (66%), Positives = 66/81 (81%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           MQR V VDGKVRTD T+P+G MDV+SI KT ENFRL+YDTKGRF +H + DEEA++KL K
Sbjct: 1   MQRLVKVDGKVRTDSTFPSGLMDVISIEKTGENFRLIYDTKGRFTVHRITDEEAQYKLGK 60

Query: 148 VRSVQFGQKGIPYINTYDGRT 168
           V+ VQ G+ GIPY+ T+D RT
Sbjct: 61  VKRVQLGKGGIPYLVTHDART 81


>gi|219881173|gb|ACL51789.1| putative ribosomal protein S4 [Picea abies]
 gi|219881175|gb|ACL51790.1| putative ribosomal protein S4 [Picea glauca]
          Length = 71

 Score =  118 bits (295), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/64 (84%), Positives = 59/64 (92%)

Query: 215 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
           G+IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSIIEEA
Sbjct: 1   GVIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIEEA 60

Query: 275 RKRQ 278
           RKR 
Sbjct: 61  RKRH 64


>gi|413936106|gb|AFW70657.1| putative protein disulfide isomerase family protein isoform 1 [Zea
           mays]
 gi|413936107|gb|AFW70658.1| putative protein disulfide isomerase family protein isoform 2 [Zea
           mays]
          Length = 84

 Score =  117 bits (294), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/63 (85%), Positives = 58/63 (92%)

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
           RYPDPLIKA DTIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKG FET
Sbjct: 14  RYPDPLIKAIDTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGIFET 73

Query: 230 IHI 232
           IH+
Sbjct: 74  IHM 76


>gi|344247051|gb|EGW03155.1| 40S ribosomal protein S4 [Cricetulus griseus]
          Length = 176

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 99/167 (59%), Gaps = 7/167 (4%)

Query: 41  THYNSLGLQAPKP-SSGPHKSR-----ECLPLILVLRNRLKYALTYREVIAILMQRHVLV 94
           T + +L L AP     GP K       +CLPL + LRNRL+ A+   + + I  Q  + V
Sbjct: 9   TLHCALMLAAPPWLVRGPKKHTTGCRLQCLPLDVFLRNRLRCAV-MEDKMKISKQCVIKV 67

Query: 95  DGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFG 154
           DGKV TD  YPAGF + ++I K+++N  L+ DTKG F +H +  +EAK KLC++R V  G
Sbjct: 68  DGKVTTDVAYPAGFTNAITINKSSKNLCLVCDTKGHFIMHHITSKEAKNKLCRMRMVFVG 127

Query: 155 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 201
            KGI  +  +D  T+ YP+PLIK N T+   L+ + I +  KF+  N
Sbjct: 128 TKGILNVMIHDKHTVHYPNPLIKVNGTVLDLLDTDNIIEVFKFNTDN 174


>gi|327400860|ref|YP_004341699.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
 gi|327316368|gb|AEA46984.1| 30S ribosomal protein S4e [Archaeoglobus veneficus SNP6]
          Length = 231

 Score =  117 bits (292), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH ++  +PL++++R+ L  A T RE   ++    +LVDG+ R D  +P G  DV
Sbjct: 24  KTAPGPH-NKNAVPLLVIVRDFLGLADTAREARRVIAAGEILVDGRPRKDYKFPVGLFDV 82

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPK  +++R+L+D KGR+    + D+  K KL K+ +    + G   +N +DG  I  
Sbjct: 83  ISIPKLGKSYRILFDDKGRYIPKEIGDD--KLKLYKIVNKTIVKGGKVQLNLFDGTNI-L 139

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            D   K  D++ L+L E KI D +KF+ G +VM+ GG + G +G IK  +  +GS   + 
Sbjct: 140 ADNTYKTKDSVLLELPEKKIVDHLKFEEGALVMIVGGTHAGEIGRIKEYKVVRGSAPNLV 199

Query: 232 IQDALGHEFATRLGNVFTIGK-GSKPWVSL 260
             ++      T   +VF +GK   KP + L
Sbjct: 200 TIESEKGVITTIEDHVFVVGKPDGKPVIDL 229


>gi|297619576|ref|YP_003707681.1| 30S ribosomal protein S4E [Methanococcus voltae A3]
 gi|297378553|gb|ADI36708.1| Ribosomal protein S4E, central domain protein [Methanococcus voltae
           A3]
          Length = 244

 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P+ G H   + LPL+L++R+ LKYA   RE   I+    +L+DGK R +   P G MD+
Sbjct: 31  RPAPGSHAMDKSLPLLLIIRDVLKYADNSREAKKIIQTGKILIDGKKRKEYKLPVGLMDL 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +S+P  NEN+ +L+D  GR  L  +  EEA  KLCK+ +    + G   +N +DGR    
Sbjct: 91  ISVPLINENYVVLFDESGRLTLKKV--EEAGVKLCKIVNKTVIKGGHIQLNLHDGRNQII 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D+I L + E KI   ++F    +  VTGG++ G    I   E+ 
Sbjct: 149 TVADATKAEEDVYKTGDSILLSIPEQKIAGHVQFGENKLAYVTGGKHVGEFAKIIEIEER 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           K   + I ++   G +F T    VF +G  ++P ++L
Sbjct: 209 KLYADIITLETKDGEQFKTVKDYVFIVGD-NEPVINL 244


>gi|296242597|ref|YP_003650084.1| 30S ribosomal protein S4 [Thermosphaera aggregans DSM 11486]
 gi|296095181|gb|ADG91132.1| SSU ribosomal protein S4E [Thermosphaera aggregans DSM 11486]
          Length = 252

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 119/224 (53%), Gaps = 16/224 (7%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PL+L++R+ L+ A T +E   ++ + +  +DGKVR D  +P G MDV
Sbjct: 31  KPSPGPHAIARSIPLLLIVRDVLRLAKTGKEARRLISEGYFKIDGKVRRDYKFPVGMMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           + +  TNE +R++        L  +  EEA FKL ++      + G   +N +DGR I  
Sbjct: 91  IEVVGTNEYYRVVPVPTKVLDLVKIAKEEASFKLVRIEDKTTVKNGHIQLNLHDGRNILV 150

Query: 170 RYPDPLIKAND------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII----KN 219
           R  DP     D      T+++ L   +I ++I+   G I +++GGRN GRVG I    + 
Sbjct: 151 RVSDPRNPVEDVYETLGTLQIALPGQEILNYIQLKEGVIAIISGGRNVGRVGRIVSIHRG 210

Query: 220 REKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
             +H+     + I+D  G +  T L  +F IG   KP ++LP+G
Sbjct: 211 MRRHR---SIVTIEDKNGVKVQTSLDYIFPIGV-EKPLITLPEG 250


>gi|435852126|ref|YP_007313712.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
 gi|433662756|gb|AGB50182.1| ribosomal protein S4E [Methanomethylovorans hollandica DSM 15978]
          Length = 237

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 3/205 (1%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH  +  +PL +VLR+ L    T  E   +L +  +LVDG +R D  +P G +DVVSIP
Sbjct: 30  GPHNRQLSIPLGVVLRDMLHVVDTRVEAKRVLSEGSILVDGIIRKDLRFPIGLLDVVSIP 89

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
           K  +++R+L D KGR  LH L   E+  KLC++      + G   +N  DG  +   +  
Sbjct: 90  KMEQSYRVLLDRKGRLELHKLEGTESS-KLCRILGKTVIKGGKVQLNLNDGSNLIGSNDY 148

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDA 235
            KA D++ L + + KI   IK++VGN+ ++ GG++ G++G IK+    + S     +   
Sbjct: 149 -KAKDSVILSVPDKKILTHIKYEVGNLALIIGGKHTGKIGAIKDINTVRSSNSNTVLIAG 207

Query: 236 LGHEFATRLGNVFTIGKGSKPWVSL 260
            G EF T    V  IG   KP + L
Sbjct: 208 EGEEFHTIEDYVVVIGT-DKPEIKL 231


>gi|336121758|ref|YP_004576533.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
 gi|334856279|gb|AEH06755.1| 30S ribosomal protein S4e [Methanothermococcus okinawensis IH1]
          Length = 247

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 10/204 (4%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH     LPL+L++R+ L YA   RE   I+    +LVDG  R +  YPAG MDV+SIP
Sbjct: 35  GPHSMDNSLPLLLIVRDILGYADNAREAKKIIKMGKILVDGVKRKEHRYPAGLMDVISIP 94

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-------- 167
            TNENF +L D KGR  L   + ++   KLCK+++    + G   +N +DGR        
Sbjct: 95  DTNENFLVLLDEKGRITLK--KTDKNDVKLCKIKNKTVIKGGHIQLNLHDGRNQIVKVSD 152

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
             +  + + K  D + + + E +I   ++F  G +  +TGG++ G    I   EK K   
Sbjct: 153 ATKAEEDIYKTGDCVLISIPEQEIVGHVQFGEGKLAYITGGKHAGDFAKIIEIEKRKLYP 212

Query: 228 ETIHIQDALGHEFATRLGNVFTIG 251
           + I ++   G +F T    VF +G
Sbjct: 213 DIITLETKDGEQFKTIKDYVFVVG 236


>gi|134045213|ref|YP_001096699.1| 30S ribosomal protein S4e [Methanococcus maripaludis C5]
 gi|189045352|sp|A4FWA9.1|RS4E_METM5 RecName: Full=30S ribosomal protein S4e
 gi|132662838|gb|ABO34484.1| SSU ribosomal protein S4E [Methanococcus maripaludis C5]
          Length = 244

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL+LV+R+ LKYA   RE   I+    +L+DG  R +  +PAG MDV
Sbjct: 31  RPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +SIP+ +EN+ +L+D  GR  L   + ++A  KLCK+ +    + G   +N +DGR    
Sbjct: 91  LSIPEMDENYLVLFDESGRISLK--KTDKADAKLCKIVNKTVIKGGHIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D++ + + E  I   + F  G +  VTGG++ G    I   E  
Sbjct: 149 KVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G+  +P +S+
Sbjct: 209 ALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244


>gi|170291174|ref|YP_001737990.1| 30S ribosomal protein S4e [Candidatus Korarchaeum cryptofilum OPF8]
 gi|259495261|sp|B1L778.1|RS4E_KORCO RecName: Full=30S ribosomal protein S4e
 gi|170175254|gb|ACB08307.1| Ribosomal protein S4E [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 235

 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 8/203 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH   E +PL+L++R+ LK A T RE   I+  + +LVDGK R D  +  G MDV
Sbjct: 31  KPSPGPHAIDEGIPLLLIVRDMLKLATTAREARRIISMKKILVDGKPRYDYKFQVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP+   N+R++ D     RL  +   E+K KL KV   +  + G   + ++DGR    
Sbjct: 91  ISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKLVKVIGKRTIRGGRIQLTSHDGRNFLL 150

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
               +K  D++ ++L    + D ++FD G+ V+VT GR  GR+G +      +G    I 
Sbjct: 151 DGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLVTRGRMAGRIGRV------EGIGTIIE 204

Query: 232 IQDALGHEFATR--LGNVFTIGK 252
           ++D    E + R    N+  +GK
Sbjct: 205 MRDLENPELSYRGVKENLIVVGK 227


>gi|429217547|ref|YP_007175537.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
 gi|429134076|gb|AFZ71088.1| ribosomal protein S4E [Caldisphaera lagunensis DSM 15908]
          Length = 252

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 9/220 (4%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
            PKPS GPH + + LPL++VLR+ LKYA T +E I I+ +  + VDG+V  D  YP   M
Sbjct: 29  TPKPSPGPHNAEQSLPLLVVLRDMLKYAETGKEAIKIINENKIKVDGRVVNDYKYPLSVM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ IP+ +E +R++        L+ +  EEA  K  ++ +    + G   +N   GR I
Sbjct: 89  DVLEIPENDEYYRVIPYPTDYLGLYKITKEEASLKPVRIENKTIVKGGNLQLNLSGGRNI 148

Query: 170 -------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREK 222
                     +   K  DT+ + L   +I + I F +G+  +V  G+N G++G I +  K
Sbjct: 149 LVKFKEGEKKEVPYKTLDTLLITLPNQEIKEHIPFQIGDYALVIWGKNVGKLGKIVSVNK 208

Query: 223 HKG-SFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
             G    T+ ++   G +  T L  +  +GK  KP +SLP
Sbjct: 209 QWGRKSSTVTLEGKSGRKIQTILDYILIVGK-EKPVISLP 247


>gi|218117277|emb|CAQ37766.1| 40S ribosomal protein S4 [Echinorhynchus truttae]
          Length = 83

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 67/83 (80%)

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
           V  VQ G KG+P+++T+DGRTIRYPDP IK +DTIK+++E  KI DFIKF+VGNI M+TG
Sbjct: 1   VNHVQTGPKGVPFLSTHDGRTIRYPDPHIKVHDTIKINVETGKIEDFIKFEVGNICMITG 60

Query: 208 GRNRGRVGIIKNREKHKGSFETI 230
           G N GR+G + +REKH GSFE I
Sbjct: 61  GNNLGRIGALISREKHPGSFEII 83


>gi|150399473|ref|YP_001323240.1| 30S ribosomal protein S4e [Methanococcus vannielii SB]
 gi|133944|sp|P14023.1|RS4E_METVA RecName: Full=30S ribosomal protein S4e
 gi|189045356|sp|A6UQ56.1|RS4E_METVS RecName: Full=30S ribosomal protein S4e
 gi|44760|emb|CAA34692.1| unnamed protein product [Methanococcus vannielii]
 gi|150012176|gb|ABR54628.1| Ribosomal protein S4E, central [Methanococcus vannielii SB]
          Length = 244

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 116/217 (53%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL+L++R+ LK A   RE   I+    +L+DG  R +  +P G MDV
Sbjct: 31  RPSPGPHSMDKSLPLLLIVRDTLKCADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +SIP+ NEN+ +L+D  GR  L   + E+   KLCK+ +    + G   +N +DGR    
Sbjct: 91  LSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                ++  + + K  D++ + L E  +   ++F+ G +  +TGG++ G    +   EK 
Sbjct: 149 KVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G+  +P +S+
Sbjct: 209 TLYSDIVTLENKDGEKFKTIKPYVFIVGQ-DEPVISM 244


>gi|18978184|ref|NP_579541.1| 30S ribosomal protein S4 [Pyrococcus furiosus DSM 3638]
 gi|397652540|ref|YP_006493121.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
 gi|22096123|sp|Q8U011.1|RS4E_PYRFU RecName: Full=30S ribosomal protein S4e
 gi|428697934|pdb|3J20|E Chain E, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
           Revealed By Cryo-em: Implications For Evolution Of
           Eukaryotic Ribosomes (30s Ribosomal Subunit)
 gi|18893993|gb|AAL81936.1| SSU ribosomal protein S4E [Pyrococcus furiosus DSM 3638]
 gi|393190131|gb|AFN04829.1| 30S ribosomal protein S4e [Pyrococcus furiosus COM1]
          Length = 243

 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 7/217 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A +P  GPH  R  +PL+ ++R+ L YA T RE   IL +   LVDG+VR D  +P G M
Sbjct: 29  AVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR-- 167
           DVVSIP+T E++R+L +  G+  LH + ++EA  K  ++R+ +  +     +N +DG   
Sbjct: 89  DVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTNH 148

Query: 168 --TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHK 224
             +I   D    +  T+ + + E +I + + F+ G  V VT G+N  R G I++ +    
Sbjct: 149 IVSIAEKDNYFTSY-TVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKRFPM 207

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLP 261
           G  + + I+D  G  F T     F +G   KP +SLP
Sbjct: 208 GWPDVVTIEDEEGELFDTLKEYAFVVGT-DKPKISLP 243


>gi|396468646|ref|XP_003838224.1| predicted protein [Leptosphaeria maculans JN3]
 gi|312214791|emb|CBX94745.1| predicted protein [Leptosphaeria maculans JN3]
          Length = 83

 Score =  114 bits (286), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/80 (62%), Positives = 63/80 (78%)

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
           +IRYPDP IK NDT+K+DL   KI+DFIKFD G +VMVTGGRN GRVG+I +RE+H G F
Sbjct: 3   SIRYPDPAIKVNDTVKIDLSTGKISDFIKFDTGVLVMVTGGRNMGRVGVITHRERHDGGF 62

Query: 228 ETIHIQDALGHEFATRLGNV 247
             +H++DA+ +EF TR  NV
Sbjct: 63  NIVHLKDAVDNEFTTRETNV 82


>gi|215809334|gb|ACJ70374.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809336|gb|ACJ70375.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809338|gb|ACJ70376.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809340|gb|ACJ70377.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809342|gb|ACJ70378.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809344|gb|ACJ70379.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809346|gb|ACJ70380.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809348|gb|ACJ70381.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809350|gb|ACJ70382.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809352|gb|ACJ70383.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809354|gb|ACJ70384.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809356|gb|ACJ70385.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809358|gb|ACJ70386.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809360|gb|ACJ70387.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809362|gb|ACJ70388.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809364|gb|ACJ70389.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809366|gb|ACJ70390.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809368|gb|ACJ70391.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809370|gb|ACJ70392.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809372|gb|ACJ70393.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809374|gb|ACJ70394.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809376|gb|ACJ70395.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809378|gb|ACJ70396.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809380|gb|ACJ70397.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809382|gb|ACJ70398.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809384|gb|ACJ70399.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809386|gb|ACJ70400.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809388|gb|ACJ70401.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809390|gb|ACJ70402.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809392|gb|ACJ70403.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809394|gb|ACJ70404.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809396|gb|ACJ70405.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809398|gb|ACJ70406.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809400|gb|ACJ70407.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809402|gb|ACJ70408.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809404|gb|ACJ70409.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809406|gb|ACJ70410.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809408|gb|ACJ70411.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809410|gb|ACJ70412.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809412|gb|ACJ70413.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|219881163|gb|ACL51784.1| putative ribosomal protein S4 [Pinus contorta]
 gi|219881165|gb|ACL51785.1| putative ribosomal protein S4 [Pinus nigra]
 gi|219881167|gb|ACL51786.1| putative ribosomal protein S4 [Pinus pinaster]
 gi|219881169|gb|ACL51787.1| putative ribosomal protein S4 [Pinus ponderosa]
 gi|219881171|gb|ACL51788.1| putative ribosomal protein S4 [Pinus resinosa]
          Length = 71

 Score =  114 bits (286), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 58/63 (92%)

Query: 215 GIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEA 274
           G IK+REKHKGSFE IH+QDA G EFATR GNVFTIGKG+KPWVSLPKGKG+KLSII+EA
Sbjct: 1   GTIKHREKHKGSFEIIHVQDAAGQEFATRQGNVFTIGKGTKPWVSLPKGKGVKLSIIDEA 60

Query: 275 RKR 277
           RKR
Sbjct: 61  RKR 63


>gi|329009625|gb|AEB71432.1| Y-linked ribosomal protein S4 [Bubalus bubalis]
          Length = 77

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 63/77 (81%)

Query: 92  VLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSV 151
           + +DGKVRTD TYPAGFMDV+SI KT ENFRL+YDTKGRF +H +  EEAK+KLCKVR +
Sbjct: 1   IKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKI 60

Query: 152 QFGQKGIPYINTYDGRT 168
             G KGIP++ T+D RT
Sbjct: 61  FVGTKGIPHLVTHDART 77


>gi|150402580|ref|YP_001329874.1| 30S ribosomal protein S4e [Methanococcus maripaludis C7]
 gi|189045353|sp|A6VGZ7.1|RS4E_METM7 RecName: Full=30S ribosomal protein S4e
 gi|150033610|gb|ABR65723.1| Ribosomal protein S4E, central [Methanococcus maripaludis C7]
          Length = 244

 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL+LV+R+ LKYA   RE   I+    +L+DG  R +  +PAG MDV
Sbjct: 31  RPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +SIP+ +EN+ +L+D  GR  L      +A  KLCK+ +    + G   +N +DGR    
Sbjct: 91  LSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNKTVIKGGHIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D++ + + E  I   + F  G +  VTGG++ G    I   E  
Sbjct: 149 KVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G+  +P +S+
Sbjct: 209 ALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244


>gi|325967619|ref|YP_004243811.1| 30S ribosomal protein S4 [Vulcanisaeta moutnovskia 768-28]
 gi|323706822|gb|ADY00309.1| 30S ribosomal protein S4E, central domain-containing protein
           [Vulcanisaeta moutnovskia 768-28]
          Length = 248

 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL +++R+ L+Y    RE   ++    + VDGK+R D  YP G MDV
Sbjct: 27  RPSPGPHPLAKSLPLAILVRDVLRYTKNLREARYVIGNGLIKVDGKIRRDYKYPVGLMDV 86

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + I  TNE +RL+           +  EEA++KLC++ +    + G   +N +DG+ ++ 
Sbjct: 87  IEIIPTNETYRLVPHPTKFLWPVPISQEEARYKLCRIENKTMVKGGQIQLNLHDGKNLQL 146

Query: 172 P---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSF 227
           P       +  D++ +D+  NKI D +K ++G++ ++  G+N G  G II+  + ++   
Sbjct: 147 PYEEGSKYETLDSVLIDISGNKILDHVKLELGSLGLIVDGKNVGYYGKIIEIIQTYRKRG 206

Query: 228 ETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
            T  I  + G E  T +  +F +GK  KP V++
Sbjct: 207 STAKIMTSDGKEVRTIIDYLFAVGK-EKPLVTI 238


>gi|414872252|tpg|DAA50809.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 255

 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 98/198 (49%), Gaps = 54/198 (27%)

Query: 39  LLTHYNSLGLQAPKPSSGPHKSRECLPL----ILVLRNRLKYALTYREVIAILMQRHVLV 94
           +L+  ++L L   +   G      C PL    I  +R RL        +  + +QRHVLV
Sbjct: 100 MLSFADNLSLDRDRYPQGRAGFATC-PLLPDEIANVRERLLDFFMNELIPYMNLQRHVLV 158

Query: 95  DGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFG 154
           DGK           M   S+ +T         TK   RLH +RDE+AKFKLCK       
Sbjct: 159 DGK-----------MPFPSLRQTG--------TKRCLRLHPIRDEDAKFKLCK------- 192

Query: 155 QKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRV 214
                                  ANDTIK+DLE NKI DF KFDVGN+VMVTGGRN GRV
Sbjct: 193 -----------------------ANDTIKIDLETNKIMDFFKFDVGNVVMVTGGRNIGRV 229

Query: 215 GIIKNREKHKGSFETIHI 232
           G IKN EKHKGSFE I +
Sbjct: 230 GEIKNWEKHKGSFEVIDV 247


>gi|159905645|ref|YP_001549307.1| 30S ribosomal protein S4e [Methanococcus maripaludis C6]
 gi|226697783|sp|A9A9Q2.1|RS4E_METM6 RecName: Full=30S ribosomal protein S4e
 gi|159887138|gb|ABX02075.1| Ribosomal protein S4E, central domain protein [Methanococcus
           maripaludis C6]
          Length = 244

 Score =  113 bits (283), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL+LV+R+ LKYA   RE   I+    +L+DG  R +  +PAG MDV
Sbjct: 31  RPSPGPHSMDKSLPLLLVVRDILKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +SIP+ +EN+ +L+D  GR  L      +A  KLCK+ +    + G   +N +DGR    
Sbjct: 91  LSIPEMDENYLVLFDESGRISLKKTDKTDA--KLCKIVNKTVIKGGHIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D++ + + E  I   + F  G +  +TGG++ G    I   E  
Sbjct: 149 KVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYITGGKHVGEFAKIVEVENR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G+  +P +S+
Sbjct: 209 ALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244


>gi|227827703|ref|YP_002829483.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.14.25]
 gi|227830399|ref|YP_002832179.1| 30S ribosomal protein S4e [Sulfolobus islandicus L.S.2.15]
 gi|229579218|ref|YP_002837616.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.G.57.14]
 gi|229582030|ref|YP_002840429.1| 30S ribosomal protein S4e [Sulfolobus islandicus Y.N.15.51]
 gi|229584907|ref|YP_002843409.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.27]
 gi|238619874|ref|YP_002914700.1| 30S ribosomal protein S4e [Sulfolobus islandicus M.16.4]
 gi|284997906|ref|YP_003419673.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
 gi|385773375|ref|YP_005645941.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus HVE10/4]
 gi|385776013|ref|YP_005648581.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus REY15A]
 gi|259495262|sp|C3N5T9.1|RS4E_SULIA RecName: Full=30S ribosomal protein S4e
 gi|259495263|sp|C4KHG8.1|RS4E_SULIK RecName: Full=30S ribosomal protein S4e
 gi|259495264|sp|C3MQ71.1|RS4E_SULIL RecName: Full=30S ribosomal protein S4e
 gi|259495265|sp|C3MVJ0.1|RS4E_SULIM RecName: Full=30S ribosomal protein S4e
 gi|259495266|sp|C3NH97.1|RS4E_SULIN RecName: Full=30S ribosomal protein S4e
 gi|259495267|sp|C3NEF5.1|RS4E_SULIY RecName: Full=30S ribosomal protein S4e
 gi|227456847|gb|ACP35534.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus L.S.2.15]
 gi|227459499|gb|ACP38185.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus M.14.25]
 gi|228009932|gb|ACP45694.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012746|gb|ACP48507.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus Y.N.15.51]
 gi|228019957|gb|ACP55364.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus M.16.27]
 gi|238380944|gb|ACR42032.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus M.16.4]
 gi|284445801|gb|ADB87303.1| Ribosomal protein S4E, central [Sulfolobus islandicus L.D.8.5]
 gi|323474761|gb|ADX85367.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus REY15A]
 gi|323477489|gb|ADX82727.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           islandicus HVE10/4]
          Length = 239

 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P++GPH   + +PL +V+R+ LK A T RE   I+    VLVDGKVR D  YP G MD+
Sbjct: 25  RPNAGPHPIEKSIPLAVVIRDYLKLAETVREAKHIIFDGKVLVDGKVRKDYKYPVGLMDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIP  +  FR++ D     RL  +  +EA +K  ++ +    + G   +N  DGR I  
Sbjct: 85  VSIPSADLYFRVIPDNVRFMRLSKISADEAHYKYVRIMNKTTVKGGSIQLNLEDGRNILV 144

Query: 172 PDPLIKAND---TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---G 225
                K+     T+K++L    I D      G+  +  GG+N G  G++KN    K    
Sbjct: 145 DKETAKSFKTLMTLKIELPSQNIVDSFIISEGSYAIFVGGKNVGIHGVVKNINLSKFKSR 204

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGK 252
            +  I ++   G+ + T L NV +IG+
Sbjct: 205 KYSVITLESKDGNTYQTNLMNVMSIGR 231


>gi|413917030|gb|AFW56962.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 142

 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 56/62 (90%)

Query: 48  LQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 107
           +QA KP  GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAG
Sbjct: 54  IQALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAG 113

Query: 108 FM 109
           FM
Sbjct: 114 FM 115


>gi|156938197|ref|YP_001435993.1| 30S ribosomal protein S4 [Ignicoccus hospitalis KIN4/I]
 gi|189045350|sp|A8ACD4.1|RS4E_IGNH4 RecName: Full=30S ribosomal protein S4e
 gi|156567181|gb|ABU82586.1| SSU ribosomal protein S4E [Ignicoccus hospitalis KIN4/I]
          Length = 255

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 121/227 (53%), Gaps = 11/227 (4%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
            + A KP  GPH   E +PL++++R+ L YA T RE   ++ +  + VDG+VR D  +P 
Sbjct: 27  AVWAVKPRPGPHPIEESIPLLILVRDVLGYAETSREARKLIAEGRIKVDGRVRKDYKFPV 86

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I   +E +R++           +  EEAK K+C++ +    + G   +N +DG
Sbjct: 87  GAMDVIEIVGADEYYRMIPYPVKYLVPMRIDAEEAKKKICRIENKVTVKGGHVQLNLHDG 146

Query: 167 RT--IRYPDPL--IKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           R   IR  DP   ++A +      + + + E +I D++ F+ G I +V  GRN GRVG I
Sbjct: 147 RNVLIRVEDPRNPVEAQEYKTLGGLLITVPEQEILDYVPFEEGVIAIVKSGRNVGRVGRI 206

Query: 218 KNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           +   K  G  +T + ++D     F T    VF IGK  +P + LP+G
Sbjct: 207 EEIVKGMGRKKTLVKMRDVHDEVFYTVAEYVFPIGK-EEPLIKLPEG 252


>gi|413917031|gb|AFW56963.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 135

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 56/62 (90%)

Query: 48  LQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 107
           +QA KP  GPHKSRECLPLIL++RN LKYAL YREVI+ILMQRHVLVDGKV TDKTYPAG
Sbjct: 54  IQALKPYFGPHKSRECLPLILIIRNMLKYALAYREVISILMQRHVLVDGKVWTDKTYPAG 113

Query: 108 FM 109
           FM
Sbjct: 114 FM 115


>gi|45358974|ref|NP_988531.1| 30S ribosomal protein S4e [Methanococcus maripaludis S2]
 gi|340624721|ref|YP_004743174.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
 gi|50403627|sp|P62428.1|RS4E_METMP RecName: Full=30S ribosomal protein S4e
 gi|45047840|emb|CAF30967.1| SSU ribosomal protein S4E [Methanococcus maripaludis S2]
 gi|339904989|gb|AEK20431.1| 30S ribosomal protein S4e [Methanococcus maripaludis X1]
          Length = 244

 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS GPH   + LPL+LV+R+ LKYA   RE   I+    +L+DG  R +  +PAG MDV
Sbjct: 31  RPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +SIP+ +E + +L+D  GR  L   + ++   KLCK+ +    + G   +N +DGR    
Sbjct: 91  LSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNKTVVKGGNIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D++ + + E  I   + F  G +  +TGG++ G    I   E  
Sbjct: 149 KVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENR 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               + + +++  G +F T    VF +G+  +P +S+
Sbjct: 209 ALYSDIVTLENKDGEKFKTVKPYVFIVGQ-DEPVISM 244


>gi|20094656|ref|NP_614503.1| 30S ribosomal protein S4 [Methanopyrus kandleri AV19]
 gi|22654091|sp|Q8TW18.1|RS4E_METKA RecName: Full=30S ribosomal protein S4e
 gi|19887817|gb|AAM02433.1| Ribosomal protein S4E [Methanopyrus kandleri AV19]
          Length = 260

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           AP+P  GPH     +PL++++R+ L YA   RE   I+ +  + VDG VR +  +P G M
Sbjct: 32  APRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIM 91

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT- 168
           DVV IP+T + +R++ +   R  +  + +EEA+ K+C++++  + + G   I  +DG+  
Sbjct: 92  DVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNW 151

Query: 169 -IRYPDP------LIKANDTIKLDLEEN------KITDFIKFDVGNIVMVTGGRNRGRVG 215
            +   DP      +    D++ L+L E       K+ D I F+ G  V    GR+ G VG
Sbjct: 152 LVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWVYAMTGRHSGEVG 211

Query: 216 IIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
            +   +  +G  E  I +++  G +F T  G +  IGK  +P V++ K
Sbjct: 212 RVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK-DEPLVTVRK 258


>gi|147919321|ref|YP_686943.1| 30S ribosomal protein S4e [Methanocella arvoryzae MRE50]
 gi|121690304|sp|Q0W1X6.1|RS4E_UNCMA RecName: Full=30S ribosomal protein S4e
 gi|110622339|emb|CAJ37617.1| 30S ribosomal protein S4E [Methanocella arvoryzae MRE50]
          Length = 234

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 9/216 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP  G H     +PL++VLR+ LK A    E+  IL +  VLVDGKVR D  Y  G  D 
Sbjct: 27  KPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHEGKVLVDGKVRKDYRYTVGMFDT 86

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP  N N+R++    G+F L  + D  A  K+CK+ +    + G   +N +DG T+  
Sbjct: 87  ISIPAINANYRVVIGMDGKFHLVPVTDASA--KICKIVNKTALRGGKIQLNLHDGTTMIA 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +   K  D++ L + E KI     + VG++VMVT G++ G +G +K  +  + S     
Sbjct: 145 SNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIGKVKEIKVVRSSAPNTV 203

Query: 232 IQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIK 267
           +      +F T    VF IGK S      P  +G+K
Sbjct: 204 VITTPEGDFETIEQYVFVIGKDS------PAVQGVK 233


>gi|432091279|gb|ELK24482.1| 40S ribosomal protein S4 [Myotis davidii]
          Length = 203

 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/77 (68%), Positives = 60/77 (77%)

Query: 71  RNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR 130
           RNRLKYA+T  EV  I MQR + +D KVRTD TYPAGFMDV+SI KT ENFRL+YDTKG 
Sbjct: 64  RNRLKYAVTGDEVKKICMQRFIKIDDKVRTDITYPAGFMDVISIDKTAENFRLIYDTKGH 123

Query: 131 FRLHSLRDEEAKFKLCK 147
           F LH +  EEAK+ LCK
Sbjct: 124 FALHCITPEEAKYNLCK 140



 Score = 70.9 bits (172), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
           GSF+ +H++DA G+ FA +L N+F   KG+KPW+SLP GKGI L+I EE  KR AA+ ++
Sbjct: 145 GSFDVVHVKDANGNSFAIQLSNIFV--KGNKPWISLPHGKGIHLTIAEERDKRLAAKQSS 202


>gi|379994273|gb|AFD22763.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
          Length = 74

 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 59/74 (79%)

Query: 86  ILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKL 145
           I+ QR + VDGK RTD TYPAGFMDV+SI KTNENFRLLYDTK RF L  +  EEAKFKL
Sbjct: 1   IVKQRLLKVDGKARTDATYPAGFMDVISIEKTNENFRLLYDTKARFALKKITAEEAKFKL 60

Query: 146 CKVRSVQFGQKGIP 159
           C+V+ +  GQKGIP
Sbjct: 61  CRVKKLLVGQKGIP 74


>gi|15897612|ref|NP_342217.1| 30S ribosomal protein S4 [Sulfolobus solfataricus P2]
 gi|284174936|ref|ZP_06388905.1| 30S ribosomal protein S4e [Sulfolobus solfataricus 98/2]
 gi|384434225|ref|YP_005643583.1| 30S ribosomal protein S4E, central domain protein [Sulfolobus
           solfataricus 98/2]
 gi|11134765|sp|Q9UX94.1|RS4E_SULSO RecName: Full=30S ribosomal protein S4e
 gi|6015771|emb|CAB57598.1| ribosomal protein S4E [Sulfolobus solfataricus P2]
 gi|13813875|gb|AAK41007.1| SSU ribosomal protein S4E (rps4E) [Sulfolobus solfataricus P2]
 gi|261602379|gb|ACX91982.1| Ribosomal protein S4E, central domain protein [Sulfolobus
           solfataricus 98/2]
          Length = 239

 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P++GPH   + +PL +V+R+ LK A T RE   I+    VLVDGKVR D  YP G MD+
Sbjct: 25  RPNAGPHSIEKSIPLAVVIRDYLKLAGTIREAKHIIFDGKVLVDGKVRKDYKYPVGLMDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           VSIP  +  FR+L D     R   +  +EA++K  ++ +    ++G   +N  DGR I  
Sbjct: 85  VSIPSADLYFRVLPDNVRFMRFSKISADEARYKYVRIINKTTIKEGRIQLNLEDGRNILV 144

Query: 170 -RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK---G 225
            +      K   T+K++L   +I D       +  +  GGRN G  GI+KN    K    
Sbjct: 145 DKETAKNFKTLMTLKIELPSQQILDSFTISERSYAIFVGGRNVGIHGIVKNINLSKFKSR 204

Query: 226 SFETIHIQDALGHEFATRLGNVFTIGK 252
            +  I ++   G+ + T + NV +IG+
Sbjct: 205 KYSVITLESRDGNTYQTNIMNVMSIGR 231


>gi|342906010|gb|AEL79288.1| ribosomal protein S4e [Rhodnius prolixus]
          Length = 73

 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 59/73 (80%)

Query: 51  PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 110
           P PS+GPHK RECLPL++ LRNRLKYALT  EV  I+MQR + VDGKVRTD  YPAGFMD
Sbjct: 1   PAPSTGPHKLRECLPLVIFLRNRLKYALTNVEVTKIVMQRLIKVDGKVRTDPNYPAGFMD 60

Query: 111 VVSIPKTNENFRL 123
           V++I KT E FRL
Sbjct: 61  VITIEKTGEFFRL 73


>gi|219881153|gb|ACL51779.1| putative ribosomal protein S4 [Pinus lambertiana]
 gi|219881159|gb|ACL51782.1| putative ribosomal protein S4 [Pinus strobiformis]
          Length = 86

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREVIAI+MQR + VDGKVRTDK YPA
Sbjct: 24  GAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREVIAIVMQRLISVDGKVRTDKCYPA 83

Query: 107 GFM 109
           GFM
Sbjct: 84  GFM 86


>gi|119621546|gb|EAX01141.1| hCG1643126, isoform CRA_b [Homo sapiens]
          Length = 128

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 85/160 (53%), Gaps = 37/160 (23%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGR-----FRLHSLRDEEAK 142
           MQ+ + +D KV TD TY  G +DV SI KT ENF L+ DT+ +     ++L  L    A 
Sbjct: 1   MQQFIKIDDKVLTDITYATGSLDV-SINKTRENFHLICDTRAQKKSLIWQLMMLAPSAAL 59

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNI 202
                                           LIK ND ++ DLE  KITDFI+F+ GN+
Sbjct: 60  -------------------------------ALIKVNDIVQTDLETGKITDFIRFNTGNL 88

Query: 203 VMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 242
            MVTGG N GR+G I NREKH G F+ +H++DA  + FAT
Sbjct: 89  CMVTGGANLGRIGAITNREKHPGFFDVVHVKDANSNSFAT 128


>gi|215809414|gb|ACJ70414.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809416|gb|ACJ70415.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809418|gb|ACJ70416.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809420|gb|ACJ70417.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809422|gb|ACJ70418.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809424|gb|ACJ70419.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809426|gb|ACJ70420.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809428|gb|ACJ70421.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809430|gb|ACJ70422.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809432|gb|ACJ70423.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809434|gb|ACJ70424.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809436|gb|ACJ70425.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809438|gb|ACJ70426.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809440|gb|ACJ70427.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809442|gb|ACJ70428.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809445|gb|ACJ70429.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809447|gb|ACJ70430.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809451|gb|ACJ70432.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809453|gb|ACJ70433.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809455|gb|ACJ70434.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809457|gb|ACJ70435.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809459|gb|ACJ70436.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809461|gb|ACJ70437.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809463|gb|ACJ70438.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809465|gb|ACJ70439.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809467|gb|ACJ70440.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809469|gb|ACJ70441.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809471|gb|ACJ70442.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809473|gb|ACJ70443.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809475|gb|ACJ70444.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|215809477|gb|ACJ70445.1| putative ribosomal protein S4 [Pinus sylvestris]
 gi|219881155|gb|ACL51780.1| putative ribosomal protein S4 [Pinus nigra]
 gi|219881157|gb|ACL51781.1| putative ribosomal protein S4 [Pinus pinaster]
 gi|219881161|gb|ACL51783.1| putative ribosomal protein S4 [Pinus resinosa]
          Length = 86

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL+++LRNRLKYALTYREVIAI+MQR + VDGKVRTDK YPA
Sbjct: 24  GAFAPKPSPGPHKGRECLPLVVLLRNRLKYALTYREVIAIVMQRLISVDGKVRTDKCYPA 83

Query: 107 GFM 109
           GFM
Sbjct: 84  GFM 86


>gi|330508486|ref|YP_004384914.1| 30S ribosomal protein S4E [Methanosaeta concilii GP6]
 gi|328929294|gb|AEB69096.1| ribosomal protein S4E [Methanosaeta concilii GP6]
          Length = 234

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 3/204 (1%)

Query: 51  PKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMD 110
           PK S GPH S+E +PL++V+R+ LK     RE   +L +  VLVDGK + D   P G  D
Sbjct: 25  PKSSPGPHSSQESMPLLMVIRDMLKLVDNAREAKRVLYEGKVLVDGKSQKDHKLPIGIFD 84

Query: 111 VVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 170
           V+ +P  ++ +R+L D KG F L  L    A+ KL ++ +    +     +N  DG   +
Sbjct: 85  VIGLPLLDQQYRMLKDEKGMFYLSLLEPGSAR-KLARIENKTVLRGNKQQLNLSDGSN-K 142

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
             +   K  D++ L + E  I + I+F VGN+ MV GG++ G+ G IK+  K K S +  
Sbjct: 143 LAEGDYKVGDSLVLSIPEKDIDERIEFKVGNLAMVVGGKHSGQTGKIKDIIKVKSS-QPN 201

Query: 231 HIQDALGHEFATRLGNVFTIGKGS 254
            +  +   EF T    V+ IG  S
Sbjct: 202 RVIISGDKEFETIEEYVYMIGTDS 225


>gi|444706232|gb|ELW47581.1| EF-hand domain-containing family member A1 [Tupaia chinensis]
          Length = 426

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/80 (61%), Positives = 62/80 (77%)

Query: 141 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVG 200
            ++KLCKVR +  G KGIP++ T+D RTI Y DPLIK NDTI++D+E  K +DFIKFD G
Sbjct: 347 TQYKLCKVRKIFVGIKGIPHLVTHDARTISYLDPLIKVNDTIQIDMEIGKSSDFIKFDTG 406

Query: 201 NIVMVTGGRNRGRVGIIKNR 220
           N+ MVTGG N GR+G+I NR
Sbjct: 407 NLCMVTGGANLGRIGVITNR 426


>gi|282164903|ref|YP_003357288.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
 gi|282157217|dbj|BAI62305.1| 30S ribosomal protein S4e [Methanocella paludicola SANAE]
          Length = 234

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 3/168 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PLI+VLR+ L  A   +E+  IL +  VLVDGKVR D  +P G  DV
Sbjct: 26  KPSPGPHSEEYGMPLIVVLRDLLHVADKAKEIKQILHEGKVLVDGKVRKDHHFPVGLFDV 85

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP  + N+R++    G+F+L  + D  A  KL K+ +      G   +N +DG T+  
Sbjct: 86  ISIPDISANYRVMIGQDGKFKLVPVSD--ANSKLLKIVNKTTVTGGRTQLNFHDGTTMLA 143

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
            +      D+I L + E  I    K++VG+   VTGG++ G VG IK 
Sbjct: 144 SNDY-HTKDSIILKVPEKSIDQHFKYEVGSTAFVTGGKHAGVVGKIKE 190


>gi|298674790|ref|YP_003726540.1| 30S ribosomal protein S4e [Methanohalobium evestigatum Z-7303]
 gi|298287778|gb|ADI73744.1| Ribosomal protein S4E, central domain protein [Methanohalobium
           evestigatum Z-7303]
          Length = 240

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 54  SSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVS 113
           S GPH   + +P+ ++LR+ L       E   +L Q  VLVDGK R D  +P G  D+++
Sbjct: 28  SPGPHHKEQSMPISVILRDMLGLVDNRSEAKRVLSQGKVLVDGKPRKDLKFPVGLFDIIT 87

Query: 114 IPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 173
           IP+ NE++RLL + K +  L  L + +   KLCK+      + G   +N  DG  +   +
Sbjct: 88  IPEMNESYRLLINQKSKLILQKLEESDTN-KLCKINDKTTVKSGAIQLNLSDGTNLIGSN 146

Query: 174 PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-FETIHI 232
              KA D+I + + +  I + +++  GN+ M+ GG++ G +G IK   K +GS   T+ I
Sbjct: 147 DY-KAKDSIIITVPDKNIVNHLEYKEGNLAMIVGGKHTGEIGTIKTITKTRGSEANTVEI 205

Query: 233 QDALGHEFATRLGNVFTIGKGSKPWVSL 260
                ++F T    V  IG+  KP ++L
Sbjct: 206 S-GQNYDFETIEDYVVVIGE-DKPEINL 231


>gi|395644928|ref|ZP_10432788.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
 gi|395441668|gb|EJG06425.1| 30S ribosomal protein S4e [Methanofollis liminatans DSM 4140]
          Length = 240

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 6/205 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K S GPH S   +P+ + LR+++  A   +EV  IL QR V+++GK  TD     G  D+
Sbjct: 26  KTSPGPH-SGAAMPVAVWLRDKMGLAGNMKEVKRILNQRQVILNGKPVTDPKLGLGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPK  +++R+L D KGR     +  E AK +LCK+R+    + G   +N   G  +  
Sbjct: 85  ISIPKIGKHYRVLTDKKGRMVTIEIDAEAAKTRLCKIRNKSIVRGGKVQLNLLYGANL-L 143

Query: 172 PDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
            D      D+I + LE EN+  I D   F +GN+ MV GG++ G+VG I       GS  
Sbjct: 144 ADNTYHPKDSIVVTLEGENRFAIVDHFPFAIGNMAMVIGGKHSGKVGRISEIRVAAGSIP 203

Query: 229 T-IHIQDALGHEFATRLGNVFTIGK 252
             + +QD  G  F T    VF IG+
Sbjct: 204 NRVILQDKDGETFETVEQYVFMIGR 228


>gi|414875901|tpg|DAA53032.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 215

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/54 (90%), Positives = 51/54 (94%)

Query: 143 FKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIK 196
           FKLCKVRSVQFGQKGIPY+NTYDGRTI YPDPLIKANDTIK+DLE NKI DFIK
Sbjct: 139 FKLCKVRSVQFGQKGIPYLNTYDGRTIHYPDPLIKANDTIKIDLETNKIMDFIK 192


>gi|215809449|gb|ACJ70431.1| putative ribosomal protein S4 [Pinus sylvestris]
          Length = 86

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G  APKPS GPHK RECLPL++++RNRLKYALTYREVIAI+MQR + VDGKVRTDK YPA
Sbjct: 24  GAFAPKPSPGPHKGRECLPLVVLIRNRLKYALTYREVIAIVMQRLISVDGKVRTDKCYPA 83

Query: 107 GFM 109
           GFM
Sbjct: 84  GFM 86


>gi|413936658|gb|AFW71209.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 150

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/56 (87%), Positives = 52/56 (92%)

Query: 142 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           +FKLCKVR VQFGQKGIPY+NTYDGRTIRYPDPLIKANDTIK+DLE NKI DFIK 
Sbjct: 73  QFKLCKVRFVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKL 128


>gi|413932716|gb|AFW67267.1| putative threonine aldolase family protein [Zea mays]
          Length = 467

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 52/57 (91%)

Query: 141 AKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
            +FKLCKVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK 
Sbjct: 389 CEFKLCKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 445


>gi|390363321|ref|XP_788494.2| PREDICTED: 40S ribosomal protein S4-like [Strongylocentrotus
           purpuratus]
          Length = 79

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/78 (66%), Positives = 62/78 (79%)

Query: 204 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           M+TGGRN GRVG I +REKH GSFE +HI+DA  H +ATRLGNVF IGK +K +VSLPKG
Sbjct: 1   MITGGRNLGRVGTITHREKHPGSFEIVHIKDASDHTYATRLGNVFVIGKANKAYVSLPKG 60

Query: 264 KGIKLSIIEEARKRQAAQ 281
           KGI+L+I EE  KR A +
Sbjct: 61  KGIRLTIAEEREKRIAQR 78


>gi|410670339|ref|YP_006922710.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
 gi|409169467|gb|AFV23342.1| 30S ribosomal protein S4e [Methanolobus psychrophilus R15]
          Length = 236

 Score =  108 bits (269), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 48  LQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAG 107
           + A +P  GPH  ++ +PL +VLR+ L       E   +L +  VLVDG +R D  +P G
Sbjct: 24  ITATRP--GPHNKQQSIPLAVVLRDMLCVVDNRAEAKRVLSEGKVLVDGVIRKDLRFPVG 81

Query: 108 FMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR 167
            +DV+S+P  N  +R+L D KGR  LH ++ E    KLC++      + G+  +N  DG 
Sbjct: 82  LLDVISMPVENVAYRVLLDGKGRLELHKIK-ESTDNKLCRINGKTVLKGGVIQLNLNDGS 140

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
            I   +      D+I L L + K+   IK+  GN+ ++ GG++ G +G IK
Sbjct: 141 NIIGSNDY-NTKDSIILSLPDKKVVQHIKYQAGNLALIVGGKHTGSIGTIK 190


>gi|413941845|gb|AFW74494.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 173

 Score =  107 bits (268), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 54/62 (87%)

Query: 158 IPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           IPY+NTYDGRTIR PD LIKANDT K+DLE NKI DF KFDVGN+VMV GGRN GRVG+I
Sbjct: 112 IPYLNTYDGRTIRNPDQLIKANDTTKIDLETNKIMDFFKFDVGNVVMVIGGRNIGRVGVI 171

Query: 218 KN 219
           KN
Sbjct: 172 KN 173


>gi|390460190|ref|XP_003732439.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S4, Y isoform
           1-like [Callithrix jacchus]
          Length = 231

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 56/245 (22%)

Query: 42  HYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTD 101
           H+    LQ   P  G H+ R          NRLK+ LT  EV  + +Q  +  DG+VR D
Sbjct: 17  HWMPDKLQVSAPRPGLHQLRX---------NRLKHTLTGDEVKYVCVQHFIRTDGQVRVD 67

Query: 102 KTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYI 161
            T+P+GF+DV+ + +T E+FRL +DT  R   H                           
Sbjct: 68  GTHPSGFLDVIRMEQTGEHFRLAHDTNSRLASH--------------------------- 100

Query: 162 NTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE 221
             + GR +        AN T+++     + T  +KF+ G   +VT         +I NRE
Sbjct: 101 RRHGGRLL--------ANGTVQVQGRAREST--MKFNTGTGCVVT-------ACVISNRE 143

Query: 222 KHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEAR---KRQ 278
           +  GS   +H++   G+ FAT L ++F  G G+ PW+SL   K I+L +++  R   KR 
Sbjct: 144 RQAGSSRVVHLKGDGGNSFATSLSSIFVTGNGNTPWISLCGAKAIQLILLKXERLTTKRS 203

Query: 279 AAQAA 283
           +   A
Sbjct: 204 SGSTA 208


>gi|388516491|gb|AFK46307.1| unknown [Lotus japonicus]
          Length = 98

 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 58/75 (77%)

Query: 153 FGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 212
            G K +PYI T+D RTIRYPDP IKANDTI+LD+   KI + IKFD GNIVM+TGG N G
Sbjct: 1   MGPKKVPYIITHDARTIRYPDPHIKANDTIQLDIATGKIQEHIKFDTGNIVMITGGHNLG 60

Query: 213 RVGIIKNREKHKGSF 227
           RVG+I++RE+H G  
Sbjct: 61  RVGVIQSRERHPGHL 75


>gi|383319766|ref|YP_005380607.1| 30S ribosomal protein S4 [Methanocella conradii HZ254]
 gi|379321136|gb|AFD00089.1| SSU ribosomal protein S4E [Methanocella conradii HZ254]
          Length = 236

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 3/168 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PLI+VLR+ L  A   +E+  IL +  VLVDGKVR D  +P G  DV
Sbjct: 28  KPSPGPHSEEYGMPLIIVLRDMLHLADKAKEIRQILHEGKVLVDGKVRKDHRFPVGLFDV 87

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP+ N N+R++    G+F+L  + D  A  KL K+ +      G   +  +DG T+  
Sbjct: 88  ISIPELNANYRVMIGQDGKFKLVPIAD--AGMKLLKIVNKTMVPGGKIQLGFHDGTTMLA 145

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
            +      D++ L + E  I   +K++VG++  V  G++ G +G IK+
Sbjct: 146 SNDY-HTKDSLVLKVPEKSIDQHLKYEVGSMAFVIDGKHAGTLGKIKD 192


>gi|330835813|ref|YP_004410541.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
 gi|329567952|gb|AEB96057.1| 30S ribosomal protein S4e [Metallosphaera cuprina Ar-4]
          Length = 241

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           + S GPH  R  +PL L++R+ L +A T +E   I+    VLVDG+VR D  YP G MDV
Sbjct: 25  RASPGPHPLRRSIPLGLLVRDYLSFATTLKESKKIISDGKVLVDGRVRRDYKYPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP    ++R++ D     +   + +EEAKFKL ++      + G+  ++  DGR I  
Sbjct: 85  ISIPHAGLHYRIVPDKARLLKPIKISEEEAKFKLVRLTGKSIIKGGLYQLHLEDGRNILL 144

Query: 172 PD-----PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE--KHK 224
            +       I    T+K+ +    I    +   G  VM  GG+N G +G +K  +   +K
Sbjct: 145 GNENSELSKIPTLSTLKVSIPVQSILSVYQMREGAQVMAIGGKNAGAIGQVKKIQIAPYK 204

Query: 225 G-SFETIHIQDALGHEFATRLGNVFTIGK 252
              +  + I++  G E+ T L N   IG+
Sbjct: 205 AKKYSIVIIRNPSGAEYETNLANAMVIGE 233


>gi|414877859|tpg|DAA54990.1| TPA: putative threonine aldolase family protein [Zea mays]
          Length = 491

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 51/59 (86%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           E   FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK 
Sbjct: 411 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 469


>gi|414877860|tpg|DAA54991.1| TPA: putative threonine aldolase family protein [Zea mays]
          Length = 476

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 51/59 (86%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           E   FKLCKVRSV FGQKGIPY+NTYDG T+RYPDPLIKANDTIK+DLE NKI DFIK 
Sbjct: 396 ETNMFKLCKVRSVLFGQKGIPYLNTYDGCTMRYPDPLIKANDTIKIDLETNKIMDFIKL 454


>gi|413943660|gb|AFW76309.1| putative ribosomal protein S4 (RPS4A) family protein, partial [Zea
           mays]
          Length = 414

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 56/65 (86%), Gaps = 2/65 (3%)

Query: 132 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 191
           ++HS   +E  FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97  QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154

Query: 192 TDFIK 196
            DFIK
Sbjct: 155 MDFIK 159


>gi|413943661|gb|AFW76310.1| putative ribosomal protein S4 (RPS4A) family protein [Zea mays]
          Length = 182

 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 2/66 (3%)

Query: 132 RLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKI 191
           ++HS   +E  FKLCKVRSVQFGQKGIPY+NTYD RTI YPDPLIKANDTIK+DLE NKI
Sbjct: 97  QVHSFSLQE--FKLCKVRSVQFGQKGIPYLNTYDDRTICYPDPLIKANDTIKIDLETNKI 154

Query: 192 TDFIKF 197
            DFIK 
Sbjct: 155 MDFIKL 160


>gi|158563815|gb|ABW74359.1| ribosomal protein S4, partial [Modiolus modiolus]
          Length = 73

 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 58/73 (79%)

Query: 149 RSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGG 208
           R V    KG+PY+ T+DGRTIRYPDPL+K NDT+ +D+E  KI DFIKFD GN+ M+TGG
Sbjct: 1   RKVGVALKGVPYVTTHDGRTIRYPDPLVKVNDTVMVDIETGKIKDFIKFDSGNLCMITGG 60

Query: 209 RNRGRVGIIKNRE 221
            N GRVG++++RE
Sbjct: 61  HNLGRVGVVQHRE 73


>gi|255098783|gb|ACU00732.1| 40S ribosomal protein S4 [Nosema bombycis]
 gi|326559168|gb|ADZ95623.1| 40S ribosomal protein S4 [Nosema bombycis]
          Length = 172

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 1/153 (0%)

Query: 123 LLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTI 182
           +LY    +F +H +   EA FKL KV S +   + +PYI T DG   RY DP I+ NDT+
Sbjct: 1   MLYSVDKKFHIHKIDKAEASFKLAKVISKKTMYEDVPYIFTNDGSCFRYCDPKIEVNDTV 60

Query: 183 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 242
           K+DL   K+ DFI F+   +V V  G + GRV +IK+ ++   S   I ++D     F  
Sbjct: 61  KIDLASRKVVDFIPFETDKVVYVIKGEDMGRVCVIKHIKEVDYSDSIITVEDFAKKVFTI 120

Query: 243 RLGNVFTIGKGSKP-WVSLPKGKGIKLSIIEEA 274
              N+  IG       +SLP  +GIKL+ +EE+
Sbjct: 121 PSKNLIVIGNSEDNLLISLPAQRGIKLNELEES 153


>gi|70606400|ref|YP_255270.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius DSM 639]
 gi|449066612|ref|YP_007433694.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
 gi|449068886|ref|YP_007435967.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
 gi|3914911|sp|O05634.1|RS4E_SULAC RecName: Full=30S ribosomal protein S4e
 gi|2052258|emb|CAA69089.1| ribosomal protein S4E [Sulfolobus acidocaldarius]
 gi|68567048|gb|AAY79977.1| 30S ribosomal protein S4E [Sulfolobus acidocaldarius DSM 639]
 gi|449035120|gb|AGE70546.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius N8]
 gi|449037394|gb|AGE72819.1| 30S ribosomal protein S4e [Sulfolobus acidocaldarius Ron12/I]
          Length = 244

 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 14/212 (6%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +  +GPHK +E +PL ++L+  LK   T RE   I+    VLVDGKVR D  YP G MDV
Sbjct: 25  RSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFDGKVLVDGKVRRDYKYPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           V IP  +   R++ D        ++  E+AK+K  ++ +    + G+  +N  DGR I  
Sbjct: 85  VEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILL 144

Query: 170 ------RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRN---RGRVGIIKNR 220
                 +Y  P +    T+K++L E KIT       G   M+ GGRN    G++  I+  
Sbjct: 145 KGEELSQYNLPTL---TTLKIELPEQKITTAYTIKEGVYAMIIGGRNAGLHGKISKIQLA 201

Query: 221 EKHKGSFETIHIQDALGHEFATRLGNVFTIGK 252
           +  +  +  + ++   G  F T L NV  IG+
Sbjct: 202 KYKRIKYSLVTLEGKDGSTFQTNLINVMAIGE 233


>gi|51011518|gb|AAT92168.1| ribosomal protein S4 [Ixodes pacificus]
          Length = 81

 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 63/79 (79%)

Query: 204 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 263
           MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL  +F IGK +KP++SLP+G
Sbjct: 1   MVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRG 60

Query: 264 KGIKLSIIEEARKRQAAQA 282
           KGIKLS+ EE  +R  A++
Sbjct: 61  KGIKLSVAEERDRRLQAKS 79


>gi|414588670|tpg|DAA39241.1| TPA: putative threonine aldolase family protein [Zea mays]
          Length = 472

 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 51/59 (86%)

Query: 139 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKF 197
           E   FKL KVRSV FGQKGIPY+NTYDGRT+RYPDPLIKANDTIK+DLE NKI DFIK 
Sbjct: 392 ETNMFKLYKVRSVLFGQKGIPYLNTYDGRTMRYPDPLIKANDTIKIDLETNKIMDFIKL 450


>gi|20089954|ref|NP_616029.1| 30S ribosomal protein S4 [Methanosarcina acetivorans C2A]
 gi|22096115|sp|Q8TRT5.1|RS4E_METAC RecName: Full=30S ribosomal protein S4e
 gi|19914915|gb|AAM04509.1| ribosomal protein S4e [Methanosarcina acetivorans C2A]
          Length = 235

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 6/206 (2%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH     LPL +++R+ LK     RE   IL +  VLVDG  R D  +P G  DV+++P
Sbjct: 29  GPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLP 88

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             NE +R+L D KGR  LH L +E    KLC++ +    + G   +N  DG  I   +  
Sbjct: 89  LVNEAYRMLQDEKGRLTLHKL-NETNVNKLCRINNKTTVKGGKFQLNLNDGTNIIGSNEY 147

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQD 234
               D++ L + + ++   +KF+VGN+ MV GG++ G  G I++ RE       T+ I  
Sbjct: 148 -GTKDSLILSIPDKQVVKHLKFEVGNLAMVVGGQHSGETGKIMEIREVKSSRHNTVMISG 206

Query: 235 ALGHEFATRLGNVFTIGKGSKPWVSL 260
               +F T    V  IG+  KP + L
Sbjct: 207 ET--DFETIEDYVIVIGE-DKPEIRL 229


>gi|414869820|tpg|DAA48377.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 207

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 80/162 (49%), Gaps = 65/162 (40%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDV-VSIPKTNENFR--LLYD------------------ 126
           +QRHVLVDGKVRTDKTYPAGFM + +S+    + +   L+ D                  
Sbjct: 70  LQRHVLVDGKVRTDKTYPAGFMGMPISLLMHKDTYTPILVADLWCHFFGRCHFHSLRQTR 129

Query: 127 TKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 186
           T   FRLH +RDE+AKFKLC  RS+Q                                  
Sbjct: 130 TTCCFRLHPIRDEDAKFKLCNGRSIQ---------------------------------- 155

Query: 187 EENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
                     FDVGN+VMVTGGRN GRVG+IKN EKHKG FE
Sbjct: 156 ----------FDVGNVVMVTGGRNTGRVGVIKNWEKHKGIFE 187


>gi|161751098|ref|NP_376299.2| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
 gi|54039526|sp|Q975J2.2|RS4E_SULTO RecName: Full=30S ribosomal protein S4e
 gi|342306184|dbj|BAK54273.1| 30S ribosomal protein S4e [Sulfolobus tokodaii str. 7]
          Length = 243

 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           + + GPHK  E +PL L+L++ L  A T RE   ++++  ++VDG+VR D  +P G MDV
Sbjct: 25  RANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVEGKIMVDGRVRKDYKFPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP ++  FR++ D         +  E+AK+K  ++ +    + G   +N  DGR I  
Sbjct: 85  ISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILI 144

Query: 172 PDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN---REKH 223
           P   +   +     T+K+++    I    +   G   ++ GGRN G  G+IK     +  
Sbjct: 145 PKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIGGRNVGLHGVIKTIQYAKYK 204

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIG 251
           K  +  + I+   G    T L NV  IG
Sbjct: 205 KRKYSIVTIEQKNGESVQTNLQNVMVIG 232


>gi|159042387|ref|YP_001541639.1| 30S ribosomal protein S4e [Caldivirga maquilingensis IC-167]
 gi|189045348|sp|A8MB20.1|RS4E_CALMQ RecName: Full=30S ribosomal protein S4e
 gi|157921222|gb|ABW02649.1| Ribosomal protein S4E, central [Caldivirga maquilingensis IC-167]
          Length = 237

 Score =  103 bits (258), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 3/206 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH +   +PL ++LR+   YA T RE   I+ + +V VDGKVR D  YP G MDV
Sbjct: 25  KPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGKGYVKVDGKVRRDYKYPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           + +   NE +R++ D     R   +   EA  K+C++      + G   +N +DGR I  
Sbjct: 85  IELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIEDKTMVKAGKIQLNLHDGRNIIV 144

Query: 172 PDPLIKANDT---IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
                +  +T   + ++LE+ K+ D+        V+   G N GR G + N  +     +
Sbjct: 145 DQDEGRKYETLGSVVVNLEDGKLMDYYPMQPNQYVIAFNGVNVGRHGTLINWVRSFRKRD 204

Query: 229 TIHIQDALGHEFATRLGNVFTIGKGS 254
            I    A   EF T L  +  IGK S
Sbjct: 205 AIATVKAKDSEFRTVLNYLLVIGKES 230


>gi|170516825|gb|ACB15227.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 231

 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 9/205 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP++G H    C+PL LVLR+ L  A T RE   IL  R V+VDG++ TD     G MDV
Sbjct: 27  KPNAGGHSIENCMPLALVLRDVLGVAHTRREAKHILHSRQVMVDGRIETDDGRGVGLMDV 86

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +S+ +  +NFR + DT G+ R   +    A  K+C+V      +     ++ +DGR +  
Sbjct: 87  LSVGE--KNFRCVLDTNGKLRYRPIPKNAAGSKICRVTGKTTIRGAKTQLHLHDGRNLLM 144

Query: 172 PDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGSFET 229
            D    K+ D++ + L E +IT  + F  G    +TGG + G +  ++  + K       
Sbjct: 145 DDASAYKSGDSVIISLPEQQITSHLPFTEGAQSYMTGGSHTGEIATVRGHDVKRSSKANE 204

Query: 230 IHIQDALGHEFATRLGNVFTIGKGS 254
           +   D     F T    VF IG  S
Sbjct: 205 VQFDD-----FLTIADYVFVIGSES 224


>gi|119719161|ref|YP_919656.1| 30S ribosomal protein S4e [Thermofilum pendens Hrk 5]
 gi|119524281|gb|ABL77653.1| SSU ribosomal protein S4E [Thermofilum pendens Hrk 5]
          Length = 251

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 10/218 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +P+ +VLR+   YA T +E   IL  R + VDG+V TD  +P G MDV
Sbjct: 33  KPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILASRVIEVDGRVVTDYKFPVGLMDV 92

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           + I    + +R++ D   + R   ++ EEA +KL ++R     + G      +DGR +  
Sbjct: 93  LHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLI 152

Query: 170 -----RYPDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN-REK 222
                 Y   +  K  D + + +    I   + F+VG + +V  GRN G +G I   ++ 
Sbjct: 153 RKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVGTLAIVVDGRNVGFMGRINAIQQV 212

Query: 223 HKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
            K S   + ++DA G +  T L  V  +GK  KP V++
Sbjct: 213 FKRSRALVELEDASGAKSRTILQYVLPVGK-EKPLVTV 249


>gi|150401818|ref|YP_001325584.1| 30S ribosomal protein S4 [Methanococcus aeolicus Nankai-3]
 gi|189045351|sp|A6UWV0.1|RS4E_META3 RecName: Full=30S ribosomal protein S4e
 gi|150014521|gb|ABR56972.1| Ribosomal protein S4E, central [Methanococcus aeolicus Nankai-3]
          Length = 244

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +PS+GPH     LPL+LVLR+ L YA   RE   ++    VLVDG  R D  YP G MDV
Sbjct: 31  RPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKDHRYPTGLMDV 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---- 167
           +S+P  NE+F ++ D KGR +L+ ++D     KLCK+ +    + G   +N +DGR    
Sbjct: 91  ISLPDANESFLVVLDEKGRIKLNKIKDNTK--KLCKIENKTVIKGGHIQLNLHDGRNQIV 148

Query: 168 ----TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
                 +  + + K  D + L + E  I   ++F  G +  +TGG++ G    I   EK 
Sbjct: 149 KLADATKAEEDIYKTGDCVILSIPEQSIVGHVQFGEGKLAYITGGKHVGDFAKIIGIEKK 208

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           +   + I ++   G +F T    VF +G   KP +S+
Sbjct: 209 QLYPDIITLETENGEQFKTIRDYVFIVGD-DKPVISM 244


>gi|73667650|ref|YP_303665.1| 30S ribosomal protein S4 [Methanosarcina barkeri str. Fusaro]
 gi|121725704|sp|Q46GA7.1|RS4E_METBF RecName: Full=30S ribosomal protein S4e
 gi|72394812|gb|AAZ69085.1| SSU ribosomal protein S4E [Methanosarcina barkeri str. Fusaro]
          Length = 235

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 6/206 (2%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH     LPL +++R+ LK     RE   IL +  VLVDG  R D  +P G  DV+++P
Sbjct: 29  GPHSQARSLPLGIIIRDILKLVDNSREGKRILSEGKVLVDGIPRKDLRFPVGLFDVITLP 88

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             NE +R+  D KGR  LH L       KLC++ +    + G   +N  DG  I   +  
Sbjct: 89  LVNETYRMFQDEKGRLALHKLNATNVN-KLCRINNKTTLKGGKVQLNLNDGTNILGSNEY 147

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQD 234
               D++ L L + +I   ++F VGN+ MV GG++ G +G I + RE       T+ I  
Sbjct: 148 -STKDSLILSLPDKQIVKHLQFKVGNLAMVVGGQHSGEIGKITEIREVKSSRHNTVAISG 206

Query: 235 ALGHEFATRLGNVFTIGKGSKPWVSL 260
               +F T    V  IG+  KP + L
Sbjct: 207 ET--DFETIEDYVIVIGE-DKPEIRL 229


>gi|414884682|tpg|DAA60696.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 169

 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 56/73 (76%), Gaps = 3/73 (4%)

Query: 125 YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKL 184
           YD K   +   L +E   FKLCKV S QFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+
Sbjct: 78  YDHKPESQRAPLLEE---FKLCKVSSAQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKI 134

Query: 185 DLEENKITDFIKF 197
           DLE +KI DFIK 
Sbjct: 135 DLETSKIMDFIKL 147


>gi|315427720|dbj|BAJ49316.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           PS GPH  ++ +PL++ +R+ L YA        ++ Q   +VDG+V  D  +P G MDV+
Sbjct: 24  PSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQGKFMVDGRVVKDPRFPLGLMDVL 83

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           SIP+  EN+R+L        L     EEA FK+C+V      + G   I  +DGRTI + 
Sbjct: 84  SIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVVRKNHVRGGALMIGLHDGRTILFR 143

Query: 173 DPL------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK--NREKHK 224
             +      IK  DT+K+ +   +I + I  D G    +  G   G  G I    RE   
Sbjct: 144 GEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYAYIHSGARAGLHGKIMRIRREVVF 203

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               T  ++   G    T L N+  +G G  PW++L
Sbjct: 204 PDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237


>gi|315425862|dbj|BAJ47515.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
 gi|343484677|dbj|BAJ50331.1| small subunit ribosomal protein S4e [Candidatus Caldiarchaeum
           subterraneum]
          Length = 238

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           PS GPH  ++ +PL++ +R+ L YA        ++ Q   +VDG+V  D  +P G MDV+
Sbjct: 24  PSPGPHAKKKSIPLLIAVRDLLNYADNAHTARRLIKQGKFMVDGRVVKDPRFPLGLMDVL 83

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           SIP+  EN+R+L        L     EEA FK+C+V      + G   I  +DGRTI + 
Sbjct: 84  SIPELGENYRVLIKPGKGLTLAKTSSEEAGFKICQVVRKNHVRGGALMIGLHDGRTILFR 143

Query: 173 DPL------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK--NREKHK 224
             +      IK  DT+K+ +   +I + I  D G    +  G   G  G I    RE   
Sbjct: 144 GEMLDKGRAIKTLDTLKIAVPSQEILETISLDNGVYAYIHSGARAGLHGKIMRIRREVVF 203

Query: 225 GSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
               T  ++   G    T L N+  +G G  PW++L
Sbjct: 204 PDKPTATVETGQG-TVTTLLRNLMPVG-GEAPWITL 237


>gi|21228238|ref|NP_634160.1| 30S ribosomal protein S4 [Methanosarcina mazei Go1]
 gi|452210673|ref|YP_007490787.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
 gi|23822141|sp|Q8PV38.1|RS4E_METMA RecName: Full=30S ribosomal protein S4e
 gi|20906694|gb|AAM31832.1| SSU ribosomal protein S4E [Methanosarcina mazei Go1]
 gi|452100575|gb|AGF97515.1| SSU ribosomal protein S4e [Methanosarcina mazei Tuc01]
          Length = 235

 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH     LPL L++R+ LK     RE   IL +  VLVDG  R D  +P G  DV+++P
Sbjct: 29  GPHSQARSLPLGLIIRDVLKLVDNNREGKRILSEGKVLVDGISRKDLRFPVGLFDVITLP 88

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             NE +R+L D KGR  L+ L +E    KLC++ +    + G   +N  DG  I   +  
Sbjct: 89  LVNEAYRMLQDEKGRLVLYKL-NETNVNKLCRINNKTTVKGGKIQLNLNDGTNILGSNDY 147

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIKNREKHKGSFETIHIQD 234
               D++ L + +  +   +KF+VGN+ MV GG++ G  G I++ RE       T+ I  
Sbjct: 148 -GTKDSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKSSRHNTVMISG 206

Query: 235 ALGHEFATRLGNVFTIGKGSKPWVSL 260
               +F T    V  IG+  KP + L
Sbjct: 207 ET--DFETIEDYVIVIGE-DKPEIRL 229


>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
          Length = 401

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 50/54 (92%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 340 NGTIKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 393


>gi|305662603|ref|YP_003858891.1| 30S ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
 gi|304377172|gb|ADM27011.1| SSU ribosomal protein S4E [Ignisphaera aggregans DSM 17230]
          Length = 252

 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 15/222 (6%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KPS GPH     +PL++++R+ L  A T RE   I+    + VDG  R D  +P G MD 
Sbjct: 31  KPSPGPHPVSRSIPLLILVRDVLNIAKTSREAKRIIFDGKIYVDGVQRRDYKFPIGPMDS 90

Query: 112 VSIPKTNENFRLL-YDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT-- 168
           +SIP+ +   R++ Y TK  + + ++  EEA  KL ++ +    + G   + T+DGR   
Sbjct: 91  ISIPEIDMYLRMVPYPTKYLWYI-NISKEEACLKLVRIENKLTVKNGHIQLGTHDGRNIL 149

Query: 169 IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG---IIK 218
           IR  DP         K  DT+ +++   +I   I  D+G   +V  GRN GR+G    I+
Sbjct: 150 IRVKDPRNPVEAMNYKTLDTLLIEVPSQRIIQHIPLDIGKYAIVIHGRNVGRLGKILSIE 209

Query: 219 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
            RE  K     + ++D  GH F T L  V  +G   KP + L
Sbjct: 210 VREGMKRRRALVTMEDINGHRFQTILDYVMVVG-DEKPVIKL 250


>gi|91772095|ref|YP_564787.1| 30S ribosomal protein S4e [Methanococcoides burtonii DSM 6242]
 gi|91711110|gb|ABE51037.1| SSU ribosomal protein S4E [Methanococcoides burtonii DSM 6242]
          Length = 236

 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 6/202 (2%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH   + +PL ++LR+ L       E   +L + +VLVDG  R D  +P G MD+++IP
Sbjct: 30  GPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSEGNVLVDGVARKDLRFPVGLMDIITIP 89

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             N  +R++ D K R  L+ L D     KLC++      ++G   +   DG  I   +  
Sbjct: 90  LNNVEYRVMLDGKSRLVLNKL-DGTGADKLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY 148

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS-FETIHIQD 234
               D+I L + + K+   IK++VGN+ M+ GG + G VG IK     K S   T+ I  
Sbjct: 149 -NTKDSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGSIKEINTVKSSKNNTVTISG 207

Query: 235 ALGHEFATRLGNVFTIGKGSKP 256
            +  EF T    VF IG+ SKP
Sbjct: 208 EI--EFETIEDYVFVIGE-SKP 226


>gi|379003364|ref|YP_005259036.1| 30S ribosomal protein S4E [Pyrobaculum oguniense TE7]
 gi|375158817|gb|AFA38429.1| Ribosomal protein S4E [Pyrobaculum oguniense TE7]
          Length = 238

 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   KPS GPH     LPL +V+R+ L+YA T RE   I+ + ++ VDG VR D  +P 
Sbjct: 21  GVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVSRGYIKVDGVVRKDYRFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I  T E +R++ D    + L S+   EA  KL +V        G   ++ +DG
Sbjct: 81  GLMDVIEIVPTGEVYRVVPDQDRYYNLLSIPSSEASLKLLRVEGKTTVNGGRLQLHFHDG 140

Query: 167 RT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           R  I  PD    IK  DTI  DLE   I   I   +G + +VT G N G  G
Sbjct: 141 RNLITSPDMGAKIKTFDTILYDLENKSIKTHIPMKLGVMAVVTHGSNVGFSG 192


>gi|379994415|gb|AFD22834.1| 40S ribosomal protein S4, partial [Collodictyon triciliatum]
          Length = 124

 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 54/65 (83%)

Query: 160 YINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
           ++ T+DGRTIRYPDPLI+AND++K+DL   KIT+F+KF+ GN  M+TGG N GRVG++ N
Sbjct: 1   FVVTHDGRTIRYPDPLIRANDSVKVDLASGKITEFVKFETGNTCMITGGHNMGRVGVVTN 60

Query: 220 REKHK 224
            EKH+
Sbjct: 61  VEKHE 65


>gi|126460352|ref|YP_001056630.1| 30S ribosomal protein S4 [Pyrobaculum calidifontis JCM 11548]
 gi|189045358|sp|A3MWZ7.1|RS4E_PYRCJ RecName: Full=30S ribosomal protein S4e
 gi|126250073|gb|ABO09164.1| SSU ribosomal protein S4E [Pyrobaculum calidifontis JCM 11548]
          Length = 237

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 3/172 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS+GPH     LPL +V+R+ L+YA T RE   I+ + ++ VDG VR D  +P 
Sbjct: 21  GVWAVRPSTGPHSLEYSLPLAVVVRDVLRYAKTLREARYIISRGYIKVDGVVRKDYKFPI 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV I  T E +R++ D    + L  +   EA  K  +V        G   ++ +DG
Sbjct: 81  GLMDVVEIVPTGEIYRVVPDEAKYYDLKPIPSSEAALKPLRVEGKTAVSGGRIQLHFHDG 140

Query: 167 RTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           R +  P  +   IK  DT+  DLE   I   +   +G + +VT G N G VG
Sbjct: 141 RNLILPPDVGRQIKTFDTVVYDLENKAIKTHLPLRLGQLAVVTHGGNIGFVG 192


>gi|432331999|ref|YP_007250142.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
 gi|432138708|gb|AGB03635.1| ribosomal protein S4E [Methanoregula formicicum SMSP]
          Length = 241

 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 7/206 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH +   +P+ + LR+ +K A   +EV  IL Q+ V+V+G+   D     G  D+
Sbjct: 26  KTAPGPHNA-NAMPIAVWLRDHMKLARNMKEVKQILGQKDVIVNGRPCRDPKMGIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +++PK N+ +R+L D  GR     +  E AK +LCKV++      G   +N  DG  I  
Sbjct: 85  IALPKINKYYRILRDRDGRHVSVEIDAEAAKTRLCKVKNKTTIAGGKVQLNLRDGANI-L 143

Query: 172 PDPLIKANDTIKLDLE-EN--KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
            D   K+ D++ + LE EN  KI D   F VGN+ M+ GG++ G V  I +  K  GS  
Sbjct: 144 ADNTYKSGDSVVVSLEPENRFKIVDHFPFVVGNMAMIIGGKHSGNVARIVDIVKMPGSVP 203

Query: 229 T-IHIQDA-LGHEFATRLGNVFTIGK 252
             I +QD   G +F T    ++ +GK
Sbjct: 204 NKIILQDEKTGTKFDTIAPYIYMVGK 229


>gi|414868178|tpg|DAA46735.1| TPA: hypothetical protein ZEAMMB73_851694 [Zea mays]
          Length = 411

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 48/51 (94%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           +K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 353 VKIDLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 403


>gi|145591931|ref|YP_001153933.1| 30S ribosomal protein S4 [Pyrobaculum arsenaticum DSM 13514]
 gi|189045357|sp|A4WLL4.1|RS4E_PYRAR RecName: Full=30S ribosomal protein S4e
 gi|145283699|gb|ABP51281.1| SSU ribosomal protein S4E [Pyrobaculum arsenaticum DSM 13514]
          Length = 238

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   KPS GPH     LPL +V+R+ L+YA T RE   I+ + ++ VDG VR D  +P 
Sbjct: 21  GVWVVKPSPGPHSFAYSLPLAIVIRDVLRYAKTLREARYIVSRGYIKVDGVVRKDYRFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I  T E +R++ D    + L  +   EA  KL +V        G   ++ +DG
Sbjct: 81  GLMDVIEIVPTGEVYRVVPDQDRYYNLLPIPSSEASLKLLRVEGKTTVNGGRLQLHFHDG 140

Query: 167 RT-IRYPD--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           R  I  PD    IK  DTI  DLE   I   I   +G + +VT G N G  G
Sbjct: 141 RNLITSPDMGAKIKTFDTILYDLENKTIKTHIPMKLGVVAVVTHGSNVGFSG 192


>gi|374326782|ref|YP_005084982.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
 gi|356642051|gb|AET32730.1| 30S ribosomal protein S4e [Pyrobaculum sp. 1860]
          Length = 238

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS GPH     LPL +V+R+ LKYA T RE   I+ + +V VDG VR D  +P 
Sbjct: 21  GVWAIRPSPGPHSLAYSLPLAMVIRDVLKYAKTMREARYIISRGYVKVDGVVRRDYKFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV I  T E +R++ D++  + L  +  EE+  KL +V      + G   ++ +DG
Sbjct: 81  GLMDVVEIVPTGEVYRVVPDSEKYYNLLPIPSEESSMKLLRVEGKTAVKGGKLQLHFHDG 140

Query: 167 RTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           R +     L   IK  D++  DL+   I   I   +G  V+   G N G  G++
Sbjct: 141 RNLITTPELGRQIKTFDSVLYDLQNKSIKMHIPLKLGVNVLAIHGSNVGFAGVL 194


>gi|16082261|ref|NP_394715.1| 30S ribosomal protein S4e [Thermoplasma acidophilum DSM 1728]
 gi|1373335|gb|AAB02244.1| ribosomal protein s4e [Thermoplasma acidophilum]
 gi|10640605|emb|CAC12383.1| 30S RIBOSOMAL PROTEIN S4E [Thermoplasma acidophilum]
          Length = 237

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 7/214 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
            P P+ G H   + + L+ ++R+ LK +   RE   IL    V VDGK   +K +  GFM
Sbjct: 26  GPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFM 85

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ I    E++R++Y+ +G   L     E A  KL KVRS          + T+DGRT 
Sbjct: 86  DVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTF 143

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
              D   K  D   + + + KI++ IK   GN   +T G +  + G I   E  +GS   
Sbjct: 144 ITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSAN 203

Query: 230 -IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
            +H Q+     F+T   +VF IG     +V  P+
Sbjct: 204 LVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 233


>gi|290558898|gb|EFD92288.1| RNA-binding S4 domain protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 220

 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 5/168 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP  G H S++ + ++  LR+ LK A   RE   ++   +V VDGK   ++ Y  GF D+
Sbjct: 31  KPLPGKHSSKDGVSILGFLRDVLKIAANAREARYLIKNGYVFVDGKKVIEEKYVVGFSDI 90

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLR-DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIR 170
           VS+    +N+ L++   G+ +L S++ DE+   KL KV S   G+KG+  + T D R I 
Sbjct: 91  VSVK---DNYFLVW-LSGKGKLISVKKDEKIDSKLIKVMSKHKGKKGMNILFTNDSRNIV 146

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
           YP   ++ ND++ LDL+   IT  I F+ G  ++V  G+N G+ G+IK
Sbjct: 147 YPKDDVQINDSVSLDLKSYSITGKIPFESGKNIIVFSGKNAGKKGVIK 194


>gi|17380573|sp|Q56230.2|RS4E_THEAC RecName: Full=30S ribosomal protein S4e
          Length = 235

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 7/214 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
            P P+ G H   + + L+ ++R+ LK +   RE   IL    V VDGK   +K +  GFM
Sbjct: 24  GPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFM 83

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ I    E++R++Y+ +G   L     E A  KL KVRS          + T+DGRT 
Sbjct: 84  DVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTF 141

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
              D   K  D   + + + KI++ IK   GN   +T G +  + G I   E  +GS   
Sbjct: 142 ITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSAN 201

Query: 230 -IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPK 262
            +H Q+     F+T   +VF IG     +V  P+
Sbjct: 202 LVHFQEG----FSTIKDHVFMIGSSKFSFVLSPE 231


>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
          Length = 249

 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 49/54 (90%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN+VM+TGGRN G VG+IKNREKHKGSFETIH+
Sbjct: 188 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTGHVGVIKNREKHKGSFETIHV 241


>gi|385805552|ref|YP_005841950.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
 gi|383795415|gb|AFH42498.1| 30S ribosomal protein S4e [Fervidicoccus fontis Kam940]
          Length = 248

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 20/225 (8%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           A KPS GPH     +PL +VLR+ LKYA T REVI  L    V VDGKVR D  YP G M
Sbjct: 29  AIKPSPGPHSLSSSIPLGIVLRDYLKYARTKREVIRALSMGLVKVDGKVRKDYKYPVGAM 88

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ I  ++  FR + +         +  EEA  K  ++ +      G   +N +DG  I
Sbjct: 89  DVIEIVPSSLFFRAVPNMDKFISFVEIPKEEASIKPLRIENKTTVNHGHIQLNLFDGSNI 148

Query: 170 RYPDPLIKAND-------------TIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGI 216
                LIK +D             T+ + + E +I D+I  + G   ++ GG+N G +G 
Sbjct: 149 -----LIKVSDPKNPTEVPYRTLSTVIVKIPEREIIDYIPLEEGVYAIIFGGKNTGIMGK 203

Query: 217 IKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
           +K   K    + + + I+   G    T L  V  IG+  KP + L
Sbjct: 204 VKEIRKGMKRYRSLVVIETDDGSIAQTSLDYVLAIGR-EKPIIKL 247


>gi|47079417|gb|AAT10160.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           DeepAnt-JyKC7]
          Length = 232

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 11/214 (5%)

Query: 40  LTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVR 99
           LT    + +Q P P  G H    C+PL ++LR+ L  A   RE   +L  R VLVDG++ 
Sbjct: 17  LTRKTDIWVQKPNP--GGHSDEMCMPLGVILRDVLDLAHNLREAKRMLATRQVLVDGRIE 74

Query: 100 TDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 159
           TD     G MDV+++ +  ++FR + D  G+ R  S+ D+ A  KLC+V        G  
Sbjct: 75  TDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVMGKSTITDGKT 132

Query: 160 YINTYDGRTIRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
            I+ +DGR I   D  L  + DT+ + L +  +     F  G    +TGG + G    + 
Sbjct: 133 QIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLTGGSHIGITAKVV 192

Query: 219 NRE-KHKGSFETIHIQDALGHEFATRLGNVFTIG 251
           +R+ K       +   D     F T    VF IG
Sbjct: 193 SRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221


>gi|413948894|gb|AFW81543.1| hypothetical protein ZEAMMB73_624427 [Zea mays]
          Length = 76

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/51 (84%), Positives = 48/51 (94%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           +K+DLE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 18  VKIDLETNKIMDFIKFDVGNMVMVTGGRNTGRVGVIKNREKHKGSFETIHV 68


>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
          Length = 364

 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 49/54 (90%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN+VM+TGG N GRVG+IKNREKHKGSFETIH+
Sbjct: 303 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGTNTGRVGVIKNREKHKGSFETIHV 356


>gi|171186001|ref|YP_001794920.1| 30S ribosomal protein S4e [Pyrobaculum neutrophilum V24Sta]
 gi|226697784|sp|B1Y9S4.1|RS4E_THENV RecName: Full=30S ribosomal protein S4e
 gi|170935213|gb|ACB40474.1| Ribosomal protein S4E, central domain protein [Pyrobaculum
           neutrophilum V24Sta]
          Length = 238

 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 3/169 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ A +PS GPH     +PL LV+R+ L+YA T RE   I+ + ++ VDG VR +  +P 
Sbjct: 21  GVWAVRPSPGPHSLAYSIPLALVIRDVLRYAKTLREARMIISRGYIKVDGVVRRNYKFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV I  T E +R++ D +  + L  +  EEA  KL +V      + G   ++ +DG
Sbjct: 81  GLMDVVEIVPTGEIYRVVPDERSYYALVPITSEEADLKLLRVEGKTAVKGGRLQVHFHDG 140

Query: 167 RTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRG 212
           R +  P      IK  D++  DL+   +   I   +G   +VT G N G
Sbjct: 141 RNLIMPAETARQIKTFDSVLYDLKARTVRSHIPMRLGVYAVVTHGGNVG 189


>gi|268325727|emb|CBH39315.1| 30S ribosomal protein S4e [uncultured archaeon]
          Length = 235

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 4/203 (1%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           P  GPH     +PL+L++R+ LK A   RE   IL + +V+V+GKVR +  +P G  DV+
Sbjct: 26  PVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNEGNVVVNGKVRKEHKFPIGIFDVL 85

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           S+PK   ++ +L D KG+  L  + +E A +KLC+V      + G   +N +DGR I  P
Sbjct: 86  SVPKLKAHYMVLLDKKGKLSLIEIDEEAAFWKLCRVDGRTMIKAGKRQLNLHDGRNI-LP 144

Query: 173 ---DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
              +  IK +D++ + + +N+I     ++ GN  +V GG++    G I+   K K S   
Sbjct: 145 GERNEAIKTHDSLMISVPDNEILQHFAYEAGNKAVVIGGKHSAETGEIEEIRKTKSSDPN 204

Query: 230 IHIQDALGHEFATRLGNVFTIGK 252
           +         F T    VF +GK
Sbjct: 205 VVRIKQDERSFETIEDYVFVVGK 227


>gi|307354335|ref|YP_003895386.1| 30S ribosomal protein S4E [Methanoplanus petrolearius DSM 11571]
 gi|307157568|gb|ADN36948.1| Ribosomal protein S4E, central domain protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 242

 Score = 97.1 bits (240), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 6/205 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH +R  +P+ + LR+ +  AL  +EV  IL +R V+++G   TD     G  D+
Sbjct: 26  KTAPGPH-NRNSMPMAVWLRDHMGLALNMKEVKKILKERSVILNGVPCTDSKLGIGVFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPK ++ +R+L D KG +    +  ++AK +LCKV +    + G   +N   G  +  
Sbjct: 85  ISIPKVDKYYRILRDKKGDYVSIPISADDAKTRLCKVENKTIVKGGKIQLNLRYGANLIV 144

Query: 172 PDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
                K  D+I + LE +   K+TD   F  G++ M+ GG + G++G I   +   GS  
Sbjct: 145 DSQDYKPKDSIVIGLEGDNRFKVTDHYPFAEGSVAMIIGGSHSGKIGRISKIDTIPGSIS 204

Query: 229 T-IHIQDA-LGHEFATRLGNVFTIG 251
             ++++D   G +F T    +F IG
Sbjct: 205 NRVYLKDEKSGEDFDTIEEYIFVIG 229


>gi|413950347|gb|AFW82996.1| hypothetical protein ZEAMMB73_922081 [Zea mays]
          Length = 138

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 48/51 (94%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           +K++LE NKI DFIKFDVGN+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 80  VKINLETNKIMDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 130


>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
          Length = 219

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 49/54 (90%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN+VM+TGGRN  RVG+IKNREKHKGSFETIH+
Sbjct: 158 NGTIKIDLETNKIMDFIKFDVGNVVMMTGGRNTMRVGVIKNREKHKGSFETIHV 211


>gi|119872074|ref|YP_930081.1| 30S ribosomal protein S4 [Pyrobaculum islandicum DSM 4184]
 gi|189045359|sp|A1RS06.1|RS4E_PYRIL RecName: Full=30S ribosomal protein S4e
 gi|119673482|gb|ABL87738.1| SSU ribosomal protein S4E [Pyrobaculum islandicum DSM 4184]
          Length = 238

 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   + S GPH     LPL +++R+ LKYA T RE   I+ + +V +DG +R D  +P 
Sbjct: 21  GVWVVRSSPGPHSLAYSLPLAIIIRDVLKYAKTMREARYIISRGYVKIDGVIRKDYKFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDVV I  T E +R++ D K  + L  +  EEA  KL +V      + G   ++ +DG
Sbjct: 81  GLMDVVEIVPTGEIYRVVPDEKKYYALIPISSEEATLKLLRVEGKTAVKGGKLQLHFHDG 140

Query: 167 RTIRYPDPL---IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           R +     +   IK  DT+  DL+   I   I F +G   +VT G N G  G
Sbjct: 141 RNLIVSQDVGRHIKTFDTVLYDLQNKNIKMHIPFKLGAYAVVTRGGNVGFSG 192


>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
          Length = 271

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 48/54 (88%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN+VMVT GRN G VG+IKNREKHKGSFETIH+
Sbjct: 210 NGTIKIDLETNKIMDFIKFDVGNVVMVTSGRNTGHVGVIKNREKHKGSFETIHV 263


>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
          Length = 266

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 47/54 (87%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDVGN VMVTGGRN  RVG+IKN EKHKGSFETIH+
Sbjct: 205 NGTIKIDLETNKIMDFIKFDVGNAVMVTGGRNTVRVGVIKNMEKHKGSFETIHV 258


>gi|355571371|ref|ZP_09042623.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
           NOBI-1]
 gi|354825759|gb|EHF09981.1| Ribosomal protein S4E, central domain protein [Methanolinea tarda
           NOBI-1]
          Length = 241

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 7/206 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K S GPH +   +P+ + LR+ +  A+  +EV  IL Q+ V+++G+   +     G  D+
Sbjct: 26  KTSPGPHNA-NAMPVAVWLRDHMHLAVNAKEVRQILQQKEVIINGRPCRNPRMGIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIP+   +FR+L D KGR +   +  E AK +L K+R+      G   +N   G  +  
Sbjct: 85  ISIPRIGRHFRILRDKKGRHKTIEIDAEAAKSRLAKIRNKTIVPGGKVQLNLRFGANV-I 143

Query: 172 PDPLIKANDTIKLDLE-ENK--ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
            D      D+I L LE EN+  I D   F VGN+ MV GGR+ G+V  I   EK  GS  
Sbjct: 144 ADNRYHPGDSIVLSLEPENRFAILDHFPFAVGNMAMVIGGRHSGKVARIVGIEKVPGSVP 203

Query: 229 T-IHIQD-ALGHEFATRLGNVFTIGK 252
             + ++D A G  F T    ++ +G+
Sbjct: 204 NRVILEDPADGSRFETIDEYIYMVGR 229


>gi|414888286|tpg|DAA64300.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
          Length = 387

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 47/51 (92%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           +K+DLE NKI DFIKFDVGN+VMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 329 VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 379


>gi|119620364|gb|EAW99958.1| hCG1789217 [Homo sapiens]
          Length = 96

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 55/76 (72%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           MDV+SI KT EN RL+YDTKG   +H +  EEAK+KLCKVR +  G KGIP++  +D  T
Sbjct: 1   MDVISIDKTGENVRLIYDTKGHSAVHHITSEEAKYKLCKVRKIFVGTKGIPHLVIHDVHT 60

Query: 169 IRYPDPLIKANDTIKL 184
           I YPDPLIK ++  +L
Sbjct: 61  IHYPDPLIKVSNRFRL 76


>gi|193083743|gb|ACF09430.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           SAT1000-15-B12]
          Length = 231

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 9/205 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP+ G H    C+PL L+LR+ L  A T RE   IL  R V+VDG++ TD     G MDV
Sbjct: 27  KPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDGRIETDGGRGVGLMDV 86

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +++     N+R + DT G+ R   +   +A  K+C+V      +     ++ +DGR +  
Sbjct: 87  LTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRVMGKTTLRGSKSQLHLHDGRNLIM 144

Query: 172 PDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGSFET 229
            D    K+ DT+ + L E  I+    F  G  V +TGG + G +  ++  + K       
Sbjct: 145 DDASAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGGSHIGEIVTVRGHDVKRSSKPNE 204

Query: 230 IHIQDALGHEFATRLGNVFTIGKGS 254
           +   D     F T    VF IG  S
Sbjct: 205 VQFDD-----FLTIADYVFVIGSES 224


>gi|336477149|ref|YP_004616290.1| 30S ribosomal protein S4 [Methanosalsum zhilinae DSM 4017]
 gi|335930530|gb|AEH61071.1| Ribosomal protein S4E, central domain protein [Methanosalsum
           zhilinae DSM 4017]
          Length = 236

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 90/171 (52%), Gaps = 2/171 (1%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH   + +P+ +VLR+ L+      E   +L    +LVDG VR D  +P G  D+++IP
Sbjct: 30  GPHHKAQSVPIGIVLRDMLELVDNSSEAKKVLSDGKILVDGTVRKDVRFPIGLFDIITIP 89

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             N ++ +L D KGR  L+ L+D     KLCK+      + G   +N  DG  I      
Sbjct: 90  LNNLSYIVLLDRKGRLVLNQLQD-ITTTKLCKINGKTTVKGGKVQLNLSDGTNIIATSEY 148

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            K ND++ + L + +I   I++  GN+ M+ GG + G +G I++  K + S
Sbjct: 149 -KPNDSVIISLPDKEIVKHIEYKEGNLAMIVGGTHSGELGTIRSINKVRSS 198


>gi|77024951|gb|ABA61378.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           HF70_59C08]
          Length = 232

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 9/218 (4%)

Query: 40  LTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVR 99
           LT    + +  P+PS   H    C+ + +VLR+ +  A + RE    L  R + VDG+V 
Sbjct: 17  LTRKTDIWISRPRPSG--HPLERCMAMGVVLRDVIGVAKSMREAKRALATRKIRVDGRVT 74

Query: 100 TDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIP 159
           TD     G MDV+S+   ++++R + D  G+ R  S+  +EA  KLC++      + G+ 
Sbjct: 75  TDIRRGVGVMDVLSVG--DDHYRCVLDKNGKLRYASISAKEAGHKLCRIDGKTTIKGGVT 132

Query: 160 YINTYDGRTIRYPDP-LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
            +N +DGR I   D       DT+ LD+E  KI    KF+ G    + GG + G    + 
Sbjct: 133 QLNLHDGRNILVDDANKYNTMDTLVLDVESQKIEGHHKFEAGANCYLIGGSHTGGTAAMN 192

Query: 219 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKP 256
                + S +     + L  +F T + +VF IG  + P
Sbjct: 193 EYLVKRSSKD----NEVLFEDFGTIVDHVFVIGDANLP 226


>gi|193084304|gb|ACF09963.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           KM3-130-D10]
          Length = 221

 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 9/205 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP+ G H    C+PL L+LR+ L  A T RE   IL  R V+VDG++ TD     G MDV
Sbjct: 17  KPNPGGHSIENCMPLALILRDILGVAHTRREANRILHSRQVMVDGRIETDGGRGVGLMDV 76

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +++     N+R + DT G+ R   +   +A  K+C+V      +     ++ +DGR +  
Sbjct: 77  LTV--GGNNYRCVLDTNGKLRYRPIHARDADSKVCRVMGKTTLRGSKSQLHFHDGRNLIM 134

Query: 172 PD-PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGSFET 229
            D    K+ DT+ + L E  I+    F  G  V +TGG + G +  ++  + K       
Sbjct: 135 DDTSAYKSGDTVVISLPEQDISAHHPFGDGATVYLTGGSHIGEIVTVRGHDVKRSSKPNE 194

Query: 230 IHIQDALGHEFATRLGNVFTIGKGS 254
           +   D     F T    VF IG  S
Sbjct: 195 VQFDD-----FHTIADYVFVIGSES 214


>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
          Length = 296

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 48/54 (88%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFD+ N+VMVT GRN GRVG+IKNREKHKGSFETIH+
Sbjct: 235 NGTIKIDLETNKIMDFIKFDIDNVVMVTSGRNTGRVGVIKNREKHKGSFETIHV 288


>gi|329317633|gb|AEB90951.1| putative ribosomal protein S4 [Mesopolobus amaenus]
          Length = 113

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 51/63 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYPA 61

Query: 107 GFM 109
           GFM
Sbjct: 62  GFM 64


>gi|329317629|gb|AEB90949.1| putative ribosomal protein S4 [Mesopolobus amaenus]
          Length = 113

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 51/63 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYPA 61

Query: 107 GFM 109
           GFM
Sbjct: 62  GFM 64


>gi|329317631|gb|AEB90950.1| putative ribosomal protein S4 [Mesopolobus amaenus]
          Length = 113

 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 51/63 (80%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+ AP+PS+GPHK RE LPL++ LRNRLKYALT  EV  I+MQR + VDGK+RTD  YPA
Sbjct: 2   GVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNCEVTKIVMQRLIKVDGKIRTDPNYPA 61

Query: 107 GFM 109
           GFM
Sbjct: 62  GFM 64


>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
          Length = 279

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 48/54 (88%)

Query: 179 NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           N TIK+DLE NKI DFIKFDV N+VM++GGRN G VG+IKNREKHKGSFETIH+
Sbjct: 218 NGTIKIDLETNKIMDFIKFDVDNVVMMSGGRNTGHVGVIKNREKHKGSFETIHV 271


>gi|413947184|gb|AFW79833.1| putative leucine-rich repeat receptor-like protein kinase family
           protein [Zea mays]
          Length = 368

 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 44/45 (97%)

Query: 142 KFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDL 186
           +FKLCKVRSVQFGQKGIPY+NTYD RTIRYPDPLIKANDTIK+DL
Sbjct: 324 QFKLCKVRSVQFGQKGIPYLNTYDDRTIRYPDPLIKANDTIKIDL 368


>gi|414888288|tpg|DAA64302.1| TPA: hypothetical protein ZEAMMB73_830062 [Zea mays]
          Length = 76

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/51 (82%), Positives = 47/51 (92%)

Query: 182 IKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           +K+DLE NKI DFIKFDVGN+VMVTG RN GRVG+IKNREKHKGSFETIH+
Sbjct: 18  VKIDLETNKIMDFIKFDVGNVVMVTGRRNTGRVGVIKNREKHKGSFETIHV 68


>gi|159145674|gb|ABW90374.1| putative ribosomal protein S4 [Sipunculus nudus]
          Length = 67

 Score = 94.4 bits (233), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 54/64 (84%)

Query: 219 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQ 278
           +RE+H GSFE +HI+DA+GH FATRL NVF IGKG+KPW+SLP+GKG+KL+I EE  +R 
Sbjct: 3   HRERHPGSFEIVHIRDAVGHSFATRLTNVFIIGKGNKPWISLPRGKGVKLTIAEERDRRI 62

Query: 279 AAQA 282
           A ++
Sbjct: 63  ATKS 66


>gi|146302888|ref|YP_001190204.1| 30S ribosomal protein S4e [Metallosphaera sedula DSM 5348]
 gi|189045355|sp|A4YCX8.1|RS4E_METS5 RecName: Full=30S ribosomal protein S4e
 gi|145701138|gb|ABP94280.1| SSU ribosomal protein S4E [Metallosphaera sedula DSM 5348]
          Length = 241

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 9/217 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           + S GPH   + +PL L+LR+ L +  + +E   I+    VLVDG+VR D  YP G MDV
Sbjct: 25  RASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISDGKVLVDGRVRRDYKYPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI-- 169
           ++IP  +   R++ D     +   + +EE+KFKL ++ +    + G+   N  DGR +  
Sbjct: 85  IAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNKTLVKGGLLQFNLEDGRNLLI 144

Query: 170 -RYPDPLIKAN--DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            +    + K     T+K+ +   +I     F     VM  GG+N G +G +K  +     
Sbjct: 145 SKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVMAVGGKNAGIIGQLKRIQTSPYK 204

Query: 227 ---FETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
              +  + I+   G E+ T L N   IG+  KP V +
Sbjct: 205 TRRYSIVVIRSPDGSEYETNLENAMVIGE-EKPEVKV 240


>gi|268323249|emb|CBH36837.1| 30S ribosomal protein S4e [uncultured archaeon]
          Length = 235

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 2/202 (0%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           P  GPH     +PL+L++R+ LK A   RE   IL + +V+V+GKVR +  +P G  DV+
Sbjct: 26  PVPGPHPKDRSMPLLLLVRDLLKLADNSREAKRILNEGNVVVNGKVRKEHKFPIGIFDVL 85

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           S+PK   ++ +L D KG+  L  + +E A  KLC+V      ++G   +N +DGR I   
Sbjct: 86  SVPKLKAHYMVLLDKKGKLSLIEIDEEVASRKLCRVDGRTMIKEGKRQLNLHDGRNILPG 145

Query: 173 D--PLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
           +    IK +D++ + + +N+I     ++ GN  +V GG++    G I+   K + S   +
Sbjct: 146 ERSEEIKTHDSLMISVPDNEILQHFAYEAGNKAVVIGGKHSAETGEIEEIRKTESSDPNV 205

Query: 231 HIQDALGHEFATRLGNVFTIGK 252
                    F T    VF +GK
Sbjct: 206 VRIKQDERSFETIEDYVFVVGK 227


>gi|353238128|emb|CCA70083.1| probable ribosomal protein S4.e, cytosolic [Piriformospora indica
           DSM 11827]
          Length = 74

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/71 (56%), Positives = 56/71 (78%)

Query: 212 GRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSII 271
           GRVG I +RE+H G F+ +H++D L   FATR+ N+F IG+G+KPW+SLPKGKG+KL+I 
Sbjct: 2   GRVGTITHRERHIGGFDIVHVKDVLDRTFATRVTNIFVIGEGTKPWISLPKGKGVKLTIS 61

Query: 272 EEARKRQAAQA 282
           EE  +R+ A+A
Sbjct: 62  EERDQRRRAKA 72


>gi|262118828|pdb|3KBG|A Chain A, Crystal Structure Of The 30s Ribosomal Protein S4e From
           Thermoplasma Acidophilum. Northeast Structural Genomics
           Consortium Target Tar28
          Length = 213

 Score = 93.6 bits (231), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 7/206 (3%)

Query: 58  HKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKT 117
           H   + + L+ ++R+ LK +   RE   IL    V VDGK   +K +  GF DV+ I   
Sbjct: 2   HPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFXDVIEI--N 59

Query: 118 NENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIK 177
            E++R++Y+ +G   L     E A  KL KVRS          + T+DGRT    D  IK
Sbjct: 60  GESYRVVYNDQGALVLXKETKERASXKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSIK 119

Query: 178 ANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDAL 236
             D + + + + KI++ IK   GN   +T G +  + G I   E  +GS    +H Q+  
Sbjct: 120 VGDVLAVSVPDXKISEIIKXQPGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG- 178

Query: 237 GHEFATRLGNVFTIGKGSKPWVSLPK 262
              F+T   +VF IG     +V  P+
Sbjct: 179 ---FSTIKDHVFXIGSSKFSFVLSPE 201


>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
          Length = 237

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 76/160 (47%), Gaps = 31/160 (19%)

Query: 98  VRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG---------------RFRLHSLRDEEAK 142
           VRT + Y  G+M       T EN   L+   G               RF      DEE  
Sbjct: 76  VRTCRLYVQGWM------VTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGA 129

Query: 143 FKLCKVRSVQFGQKGI----------PYINTYDGRTIRYPDPLIKANDTIKLDLEENKIT 192
                +   + G   +          P   T+  R  +    L   +   ++DLE NKI 
Sbjct: 130 RAALNLSGTELGYYPVNVLPSKTAIAPVNETFLPRVTQADLKLFFESICGEIDLETNKIM 189

Query: 193 DFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
           DFIKFDV N+VMVTGGRN GRVG+IKNREKHKGSFETIH+
Sbjct: 190 DFIKFDVDNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 229


>gi|13541168|ref|NP_110856.1| 30S ribosomal protein S4e [Thermoplasma volcanium GSS1]
 gi|17368559|sp|Q97BW4.1|RS4E_THEVO RecName: Full=30S ribosomal protein S4e
 gi|14324556|dbj|BAB59483.1| ribosomal protein small subunit S4 [Thermoplasma volcanium GSS1]
          Length = 235

 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 7/203 (3%)

Query: 50  APKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
            P P  G HK+   + L+ ++R+ L+ +   RE   IL    V VDGKV  ++ +  GFM
Sbjct: 24  GPTPLPGRHKADHSVTLLTIIRDYLRLSDKEREATRILANGLVKVDGKVVKERKFGVGFM 83

Query: 110 DVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI 169
           DV+ I  + E++R++Y+ +G   L S   + A  K  +V++          +  +DGR +
Sbjct: 84  DVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNKVIAPGNKIQLGFHDGRVM 141

Query: 170 RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNRE-KHKGSFE 228
              D  I   D +   L + KIT+ IK   GN   +TGG + G  G I   E K   S  
Sbjct: 142 VTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHVGETGTISKIEIKESSSAN 201

Query: 229 TIHIQDALGHEFATRLGNVFTIG 251
            +H  +     F T   +VF IG
Sbjct: 202 LVHFDEG----FTTVKDHVFVIG 220


>gi|374724277|gb|EHR76357.1| 30S ribosomal protein S4e [uncultured marine group II
           euryarchaeote]
          Length = 233

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           +P++G H    C+P+ LV+R+ L +A + REV  IL     ++DG+V  +     G MDV
Sbjct: 28  RPTAGAHSLELCMPINLVIRDVLGFARSTREVRHILHNGLAMIDGRVCKETRRGVGLMDV 87

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +S+   + ++R + D  GR R   +  +EA +K+C++      + G   +N +DGR I  
Sbjct: 88  LSL--GDNHYRCVLDHNGRLRYRPISADEAGWKVCRIEGKSTIKGGKTQLNLHDGRNIIV 145

Query: 172 PDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET- 229
            D        ++KL L   +I + IKF  G    + GG + G    + + E  + S    
Sbjct: 146 DDAAEYSTGSSLKLALPSQEIIEHIKFAEGVRCYLIGGAHVGGFANMTSFEVKRSSMANE 205

Query: 230 IHIQDALGHEFATRLGNVFTIGKGSKP 256
           +  +D     F T   NVF +G  + P
Sbjct: 206 VQFED-----FGTVATNVFAVGSATLP 227


>gi|41615262|ref|NP_963760.1| 30S ribosomal protein S4e [Nanoarchaeum equitans Kin4-M]
 gi|54039525|sp|P62429.1|RS4E_NANEQ RecName: Full=30S ribosomal protein S4e
 gi|40068986|gb|AAR39321.1| NEQ478 [Nanoarchaeum equitans Kin4-M]
          Length = 234

 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 3/207 (1%)

Query: 45  SLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTY 104
           S G    KPS GPH     +P+ + LR+ L  A   REV  +L    VLVDG+   D  +
Sbjct: 24  SRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKF 83

Query: 105 PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK-VRSVQFGQKGIPYINT 163
           P G  DV++IP+ NE +R+L D +G+  L  +  EEA  K  K +R V      I Y  T
Sbjct: 84  PVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT 143

Query: 164 YDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH 223
            DGRT    D   K +  +  ++   KI + I  +      +  G++ GR+G+IK   K 
Sbjct: 144 -DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRIGVIKEVIKT 201

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTI 250
              +  I   +  G    T L N+  +
Sbjct: 202 DMPWPNIVRLEVAGEVGETWLDNIIPV 228


>gi|219851119|ref|YP_002465551.1| 30S ribosomal protein S4e [Methanosphaerula palustris E1-9c]
 gi|219545378|gb|ACL15828.1| Ribosomal protein S4E, central domain protein [Methanosphaerula
           palustris E1-9c]
          Length = 241

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 7/206 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH   + LP+ + LR+ + +A T +EV  IL +R V+V+G+   D     G  D+
Sbjct: 26  KTAPGPHNG-QALPIGVWLRDTMGFAQTLKEVKQILNERSVIVNGRPCRDPKMGIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++IPK  + +R+L    GR    S+  E+AK +LCKV+       G   +N   G  +  
Sbjct: 85  IAIPKMGKYYRILLAKNGRLVAISIEAEDAKSRLCKVQDKTIVSGGKTQVNLTYGANV-L 143

Query: 172 PDPLIKANDTIKLDLEENK---ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
            +      D++ L LE  +   + D   +  GN+ MV GGR+ G++G I+      GS  
Sbjct: 144 TEEACSPKDSLVLSLEPEQRFTVLDHFPYKEGNMAMVIGGRHSGKIGKIQTITTVMGSTP 203

Query: 229 TIHIQDAL--GHEFATRLGNVFTIGK 252
              I + +  G +F T    ++ +G+
Sbjct: 204 NTVILEEVGTGTQFDTIDSYIYMVGR 229


>gi|161899455|ref|XP_001712961.1| ribosomal protein S4 [Bigelowiella natans]
 gi|2500490|sp|Q40941.1|RS4_BIGNA RecName: Full=40S ribosomal protein S4
 gi|1401207|gb|AAD05368.1| small subunit ribosomal protein 4 [Bigelowiella natans]
 gi|75756456|gb|ABA27349.1| ribosomal protein S4 [Bigelowiella natans]
          Length = 242

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 107/222 (48%)

Query: 39  LLTHYNSLGLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKV 98
           ++ +   LG+   K SSGPH   + + L+ +++     A   +E   ++    + V+GK 
Sbjct: 17  MIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKK 76

Query: 99  RTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGI 158
                +P   MD +S P  N+++R+L    G+  ++ +   E   K+CKV  +       
Sbjct: 77  CLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKN 136

Query: 159 PYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK 218
             I T D R ++     IK  D++ +    ++I   +KF+VG++ ++T G++ G + +IK
Sbjct: 137 KIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIK 196

Query: 219 NREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSL 260
              K K   + IH++   G +   +  ++  IG+     +SL
Sbjct: 197 EIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238


>gi|126178526|ref|YP_001046491.1| 30S ribosomal protein S4 [Methanoculleus marisnigri JR1]
 gi|125861320|gb|ABN56509.1| SSU ribosomal protein S4E [Methanoculleus marisnigri JR1]
          Length = 242

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 9/210 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH +   LP+ + LR  +  A    EV  IL QR VLV+G+   D     G  D+
Sbjct: 26  KTAPGPHNA-GALPVGVWLREHIGLAQNASEVKKILHQRDVLVNGRACKDSRMGLGVFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIPK  +++R+  D KG      +  E AK +LCK+R+    + G   +N   G  +  
Sbjct: 85  VSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKIRNKTTVKGGKVQLNFAFGANV-L 143

Query: 172 PDPLIKANDTIKLDLEEN-----KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D   KA D++ + L  +     +I D   +  GN+ M+ GG++ G+VG I    +   S
Sbjct: 144 ADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVGRIVEIIRTASS 203

Query: 227 F--ETIHIQDALGHEFATRLGNVFTIGKGS 254
                I   D+ G  F T    VF +G+ +
Sbjct: 204 VPNHVILTDDSAGERFETIEEYVFMVGRSA 233


>gi|431899548|gb|ELK07511.1| 40S ribosomal protein S4 [Pteropus alecto]
          Length = 76

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 109 MDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT 168
           MDV+SI KT +NF L+YDT+GRF +  +  E+AKFK CKVR +  G KGIP++ T+D   
Sbjct: 1   MDVISIDKTRQNFLLVYDTQGRFAIDRMTPEKAKFKSCKVRKIFVGTKGIPHLETHDA-- 58

Query: 169 IRYPDPLIKANDTIKLDL 186
            RYPDPLI+ N TI++D+
Sbjct: 59  -RYPDPLIEVNGTIQIDI 75


>gi|48477724|ref|YP_023430.1| 30S ribosomal protein S4e [Picrophilus torridus DSM 9790]
 gi|73918003|sp|Q6L1B5.1|RS4E_PICTO RecName: Full=30S ribosomal protein S4e
 gi|48430372|gb|AAT43237.1| small subunit ribosomal protein S4E [Picrophilus torridus DSM 9790]
          Length = 234

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           G HK    +PL++ LR+ LK     RE+  IL    V+VDGKV  ++    GFMD +++ 
Sbjct: 30  GSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTV- 88

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
            +  ++ + YD KG+  +     E    KL +V+   + + G   I+ +DG T+      
Sbjct: 89  -SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKD 147

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQD 234
           IK  D++ + + + +I D +KF  GN V +TGG + G +  IK+ E    S E  +H+ +
Sbjct: 148 IKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIATIKSIEIKSSSGENMVHMNE 207

Query: 235 ALGHEFATRLGNVFTIG 251
                F+T    VF +G
Sbjct: 208 G----FSTVSSYVFVMG 220


>gi|374633056|ref|ZP_09705423.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
 gi|373524540|gb|EHP69417.1| ribosomal protein S4E [Metallosphaera yellowstonensis MK1]
          Length = 242

 Score = 92.0 bits (227), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           KP  GPH     +PL ++LR+ L  A   RE   I+    V+VDG+VR D  YP G MDV
Sbjct: 25  KPIPGPHPLSRSIPLGILLRDYLGIASNLRESKKIISDGLVMVDGRVRRDYKYPVGLMDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++IP  +  +R++ D     ++  +  EEA +KL ++      +     +N  DGR I  
Sbjct: 85  ITIPSASLYYRVVPDRVRLLKVVKISSEEAGYKLVRLTGKTVVKGSALQLNFEDGRNILL 144

Query: 172 PDPLIKAN------DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIK-----NR 220
            D    +        T K+ +   +I    +   G  VM  GG+N G +G +K     N 
Sbjct: 145 KDKQEASQFNMPTLTTFKIAIPSQQILGTYQLKEGVYVMAIGGKNAGVIGTLKRIQWANY 204

Query: 221 EKHKGSFETIHIQDALGHEFATRLGNVFTIGK 252
           +K + +   I  +D  G E+ T L N   +G+
Sbjct: 205 KKKRHTIVVIRGED--GTEYETNLENSMVVGE 234


>gi|18313980|ref|NP_560647.1| 30S ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
 gi|23822150|sp|Q8ZTD3.1|RS4E_PYRAE RecName: Full=30S ribosomal protein S4e
 gi|18161555|gb|AAL64829.1| ribosomal protein S4 [Pyrobaculum aerophilum str. IM2]
          Length = 238

 Score = 91.7 bits (226), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 85/174 (48%), Gaps = 3/174 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   +PS GPH     LPL L++R+ LKYA T  E   I+ + +V VDG VR D  +P 
Sbjct: 21  GVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MDV+ I  T E +R++ D    + L  +  EEA  KL +V      + G   ++ +DG
Sbjct: 81  GLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDG 140

Query: 167 R---TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
           R   T       IK  D++  DL    I   I   +G   +V  G N G  G +
Sbjct: 141 RNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNVGFSGTL 194


>gi|294496005|ref|YP_003542498.1| 30S ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
 gi|292667004|gb|ADE36853.1| SSU ribosomal protein S4E [Methanohalophilus mahii DSM 5219]
          Length = 236

 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 2/162 (1%)

Query: 56  GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIP 115
           GPH   + +PL +VLR+ L       E   +L +  VLVDG VR D   P G MD+++IP
Sbjct: 30  GPHSKEQSVPLAVVLRDMLGIVDNRAEAKRVLSEGKVLVDGVVRKDVRLPVGIMDIITIP 89

Query: 116 KTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL 175
             N ++R+L D  GR  L  +   E K KLC++      + G   +N  DG  +   +  
Sbjct: 90  SDNTSYRVLLDRMGRLSLQKIGGIEEK-KLCRIDGKTCIKGGKLQLNLDDGSNVLGSNDY 148

Query: 176 IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
            K  D+I + +   +I   I++  GN+ ++ GG + G VG I
Sbjct: 149 -KRKDSIVISIPGKEILKHIEYKEGNLALIVGGSHTGEVGKI 189


>gi|374630578|ref|ZP_09702963.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
 gi|373908691|gb|EHQ36795.1| SSU ribosomal protein S4E [Methanoplanus limicola DSM 2279]
          Length = 242

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 6/206 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH S   +P+ + LR+ +  A   +EV  IL  R ++V+G   TD     G  D+
Sbjct: 26  KTAPGPHNSH-AMPVAVWLRDHVGLANNVKEVKKILTDRSLIVNGSPCTDSKMGIGVFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +SIPK  + +R+L + KG +    + ++ AK +LCK+      + G   +N   G  +  
Sbjct: 85  ISIPKIGKYYRILRNKKGDYVSVEITEDAAKSRLCKISDKTIVKGGRIQLNLRYGANVIV 144

Query: 172 PDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
                   D++ L LE     K+ D   F VG++ M+ GG++ G+VG I       GS  
Sbjct: 145 DSQEYNPKDSVVLSLEPETRFKVIDHFPFAVGSVAMIIGGKHSGKVGKISEICVVPGSIP 204

Query: 229 T-IHI-QDALGHEFATRLGNVFTIGK 252
             I++ ++  G EF T    VF +GK
Sbjct: 205 NRIYLTEEKTGVEFDTIEDYVFIVGK 230


>gi|194698422|gb|ACF83295.1| unknown [Zea mays]
          Length = 66

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 45/46 (97%)

Query: 64  LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFM 109
           +PLIL++RN LKYALTYREVI+ILMQRHVLVDGKVRTDKTYPAGFM
Sbjct: 1   MPLILIIRNMLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFM 46


>gi|2275282|gb|AAB63866.1| ribosomal protein S4 homolog [Schizosaccharomyces pombe]
          Length = 81

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 47/57 (82%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKT 103
           G  APKPS GPHK+RECLPLI+ LRNRLKYAL  REV AILMQR + VDGKVRTD T
Sbjct: 25  GTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRTDST 81


>gi|242052941|ref|XP_002455616.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
 gi|241927591|gb|EES00736.1| hypothetical protein SORBIDRAFT_03g014423 [Sorghum bicolor]
          Length = 67

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/50 (82%), Positives = 43/50 (86%)

Query: 235 ALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRQAAQAAA 284
            LGH FATR+GNVFTIGKG+KPWVSLPKGKGIKLSIIEE RKR AA   A
Sbjct: 18  GLGHAFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQTA 67


>gi|257076572|ref|ZP_05570933.1| 30S ribosomal protein S4e [Ferroplasma acidarmanus fer1]
          Length = 240

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVV 112
           P+   H   + +P+++ LR+ LK     RE+  IL    V VDG++  D+ +P GFMDV+
Sbjct: 27  PTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNMVKVDGRIVKDRRFPVGFMDVL 86

Query: 113 SIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYP 172
           SI     ++ ++YD KG+  +          KL KV        G   +  +DG+TI   
Sbjct: 87  SIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKKTIIGTGKIQLGFHDGKTIVTD 146

Query: 173 DPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHI 232
              I  +D + + + + +I + +K   G+ V +TGG + G +  IK+ E  K S + +  
Sbjct: 147 RKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIEVKKSSVKNMV- 205

Query: 233 QDALGHEFATRLGNVFTIG 251
              L   F+T    +F +G
Sbjct: 206 --YLNEGFSTIKDYMFVVG 222


>gi|448730389|ref|ZP_21712697.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
 gi|445793557|gb|EMA44129.1| 30S ribosomal protein S4e [Halococcus saccharolyticus DSM 5350]
          Length = 265

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y  + +E    L Q  VLV+G    D+  P G  D+
Sbjct: 26  KAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYALNQGSVLVNGDALDDEERPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +   + NE++R+  D  GR  L ++  ++A  KL K+   Q    G   +  +DGRT+  
Sbjct: 85  LEFDERNEHYRVFPDEGGRLALTTIDADDADSKLGKIEGKQQVSGGATQLALHDGRTLEV 144

Query: 172 PDPLIKA-NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    A +D+I +D E+++I     ++ G +V    GR+ G VG I + +   GS
Sbjct: 145 DDASEYAGSDSIVVD-EDDEILAHFSYEEGALVTAVEGRHAGEVGEIDDIQVTPGS 199


>gi|88603487|ref|YP_503665.1| 30S ribosomal protein S4 [Methanospirillum hungatei JF-1]
 gi|121731773|sp|Q2FT37.1|RS4E_METHJ RecName: Full=30S ribosomal protein S4e
 gi|88188949|gb|ABD41946.1| SSU ribosomal protein S4E [Methanospirillum hungatei JF-1]
          Length = 241

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 7/208 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K S GPH ++  LP+++  R+++      +E   +L +R ++V+G+         G  D+
Sbjct: 26  KTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLREREIIVNGRPVRHPDMGIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIPK+ +++R+L D KGR     + ++ A  +L K+ +    + G   +N  DG  +  
Sbjct: 85  VSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKITNKTIVKGGRIQLNLRDGSNV-L 143

Query: 172 PDPLIKANDTIKLDLEE---NKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF- 227
            D   K+ D+I L L+E   N+I D   F  GN+ M+ GG++ G VG I       GS  
Sbjct: 144 TDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMIIGGKHSGVVGRIIEHIPVPGSLP 203

Query: 228 -ETIHIQDALGHEFATRLGNVFTIGKGS 254
              I   ++ G  F T    V  +G+ S
Sbjct: 204 NRVILKDESSGESFETIDEYVVMVGRES 231


>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
          Length = 273

 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/52 (78%), Positives = 46/52 (88%), Gaps = 2/52 (3%)

Query: 183 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKH--KGSFETIHI 232
           ++DLE NKI DFIKFDVGN+VM+TGGRN GRVG IKNREKH  KGSFETIH+
Sbjct: 214 EIDLETNKIMDFIKFDVGNVVMMTGGRNTGRVGAIKNREKHKGKGSFETIHV 265


>gi|308813181|ref|XP_003083897.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
 gi|116055779|emb|CAL57864.1| putative ribosomal protein S4 (ISS) [Ostreococcus tauri]
          Length = 133

 Score = 87.4 bits (215), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 43/54 (79%)

Query: 53  PSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           P  GPHK RECLPL L+LRNRLKYALTY+EV  ILMQR V VDGK+R DK +P 
Sbjct: 78  PCEGPHKQRECLPLCLILRNRLKYALTYKEVTTILMQRCVKVDGKIRMDKCFPC 131


>gi|352683264|ref|YP_004893788.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
 gi|350276063|emb|CCC82710.1| 30S ribosomal protein S4e [Thermoproteus tenax Kra 1]
          Length = 235

 Score = 87.0 bits (214), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 47  GLQAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPA 106
           G+   +P +GPHK    +PL + +R+ L+YA T RE   I+ + ++ VDG+VR +  +P 
Sbjct: 21  GVWTVRPVTGPHKLHRSMPLAIFVRDLLRYAKTLREARYIISRGYIKVDGRVRREYKFPV 80

Query: 107 GFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDG 166
           G MD+V I  T E +R++ D     R  ++   EA  KL +V    +       ++ +DG
Sbjct: 81  GVMDIVEIVPTGEVYRIVPDPVKYIRPVAISSGEADLKLLRVEGKNYVSGNRIQLHFHDG 140

Query: 167 RT-IRYPDPLI--KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG 215
           R  I  PD  +  K  D++   L E +I   + F +G   ++  G N G  G
Sbjct: 141 RNLILSPDEGLRYKTFDSVVYSLSERRIKQHVPFKLGVNALIFDGGNTGFFG 192


>gi|193083853|gb|ACF09534.1| ribosomal protein S4 [uncultured marine group II euryarchaeote
           KM3-85-F5]
          Length = 194

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)

Query: 64  LPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRL 123
           +PL +VLR+ L  A   RE   IL  R V VDG++ TD++   G MDV+++    +++R 
Sbjct: 1   MPLGIVLRDVLGIAHNMREAKRILHSRKVSVDGRIETDRSRGVGLMDVLTVGA--DSYRC 58

Query: 124 LYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPL-IKANDTI 182
           + DT G+ R   +  +    K+C+V S    + G   I+ +DGR I   D    K+ D++
Sbjct: 59  VLDTNGKLRYRPIPKKAVGSKICRVMSKTTIKGGKTQIHLHDGRNIVVDDASKYKSGDSL 118

Query: 183 KLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFAT 242
            + L +  I+  ++   G +  +TGG + G   +I++++  + S       +    +F T
Sbjct: 119 SISLPDQAISSHVEMKNGALAYLTGGSHIGETAVIQDQDVKRSSKP----NETSFEDFGT 174

Query: 243 RLGNVFTIGKGS 254
               VF IGK +
Sbjct: 175 ITDYVFVIGKAT 186


>gi|448386101|ref|ZP_21564309.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
 gi|445655999|gb|ELZ08841.1| 30S ribosomal protein S4e [Haloterrigena thermotolerans DSM 11522]
          Length = 232

 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   + +PL+++LR+ L Y  + +E    L +  +L++G    D+  P G  D+
Sbjct: 26  KADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYALSEDAILINGDAINDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+ P   E +R+  D  GR  L  + +E A+ +L K+   Q    G   +  +DG  +  
Sbjct: 85  VAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGKQQVPGGDTQLTLHDGTNVLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D   +AND+I +D ++  I     ++ G +V    G + G++G +   +   GS
Sbjct: 145 DDDEYQANDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEVDAIDVTPGS 199


>gi|154150087|ref|YP_001403705.1| 30S ribosomal protein S4 [Methanoregula boonei 6A8]
 gi|153998639|gb|ABS55062.1| Ribosomal protein S4E, central [Methanoregula boonei 6A8]
          Length = 241

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 7/206 (3%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH +   +P+ + LR++   A T +EV  IL Q+ V+++G+   D     G  DV
Sbjct: 26  KTAPGPHNA-NAMPVAVWLRDQQGLARTMKEVKQILKQKDVVINGRPVRDPKMGIGIFDV 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +++P+  + FR+L D KGR +   +  E A+ +LCK+ +      G   +N   G  I  
Sbjct: 85  IALPRIGKYFRVLRDLKGRHKTVEIDAEAAQKRLCKIENKTIVPGGKVQLNLRYGANI-I 143

Query: 172 PDPLIKANDTIKLDLEEN---KITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
            D   K+ND++ + L+     KI +   F  GN+  + GGR+ G+V  I    K  GS  
Sbjct: 144 ADNTYKSNDSVVISLKPEDRFKILEHYPFVAGNMATIIGGRHSGKVARIIEIIKTPGSVP 203

Query: 229 T-IHIQDALGHE-FATRLGNVFTIGK 252
             + ++D    E F T    ++ IGK
Sbjct: 204 NKVILEDEKTKERFDTITPYIYMIGK 229


>gi|448735123|ref|ZP_21717340.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
 gi|445798736|gb|EMA49127.1| 30S ribosomal protein S4e [Halococcus salifodinae DSM 8989]
          Length = 264

 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y  + +E    L Q  VLV+G    D+  P G  D+
Sbjct: 17  KAGAGPH-GESGVPLLVVLRDVLGYVDSRKEARYALNQGSVLVNGDTLDDEERPIGMFDI 75

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           +   + NE++R+  D  GR  L ++  ++A  KL K+   Q    G   +  +DGRT+  
Sbjct: 76  LEFVERNEHYRVFPDEGGRLALTTIDADDADSKLGKIEGKQQVPGGATQLALHDGRTLEI 135

Query: 172 PDPLIKA-NDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    A +D+I +D E+++I     ++ G +V    GR+ G +G I + +   GS
Sbjct: 136 DDASEYAGSDSIVVD-EDDEILAHFPYEEGALVTAVEGRHAGEIGEIDDIQVTPGS 190


>gi|448503700|ref|ZP_21613329.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
 gi|445691901|gb|ELZ44084.1| 30S ribosomal protein S4e [Halorubrum coriense DSM 10284]
          Length = 237

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 2/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL+++LR+ L Y  + +E    L    +LV+G   +D+  P G  D+
Sbjct: 26  KAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSILVNGDAVSDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P+  E FR+  D  GR  L  + ++ A  +L K+ +      G+  +  +DG  +R 
Sbjct: 85  LAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNKTVVPGGVVQLTLHDGTNVRV 144

Query: 172 PDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    + ND+I +D E  +I    +++ G +V    G++ G++G I++ +   GS
Sbjct: 145 DDDADYETNDSIVVDNETKEIVAHFEYEEGELVTAVAGQHAGQIGEIEDIDVTLGS 200


>gi|397780856|ref|YP_006545329.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
 gi|396939358|emb|CCJ36613.1| 30S ribosomal protein S4e [Methanoculleus bourgensis MS2]
          Length = 244

 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 11/210 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K + GPH +   LP+ + LR  +  A    EV  IL QR VLV+G+   +     G  D+
Sbjct: 26  KTAPGPHNA-GGLPVGVWLREHIGIAQNASEVRKILHQRDVLVNGRPCRNPQIGLGVFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           VSIPK  +++R+  D  G      + +E AK +LCK+R+    + G   +N   G  I  
Sbjct: 85  VSIPKLGKHYRIQLDKLGNLISVEIPEESAKTRLCKIRNKTVIKGGRVQLNLAFGANI-L 143

Query: 172 PDPLIKANDTIKLDLEENK-------ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHK 224
            D   KA D++ + L + K       I D   F  GN+ M+ GG++ G+VG I    +  
Sbjct: 144 ADNTYKAKDSVVVTLGDPKSGEDRFRIIDHFPFAEGNVAMIVGGKHSGKVGRIVEITRTA 203

Query: 225 GSF--ETIHIQDALGHEFATRLGNVFTIGK 252
            S     + + D+    F T    +F +G+
Sbjct: 204 SSVPNRVVLVDDSADERFETIEEYIFMVGR 233


>gi|429190332|ref|YP_007176010.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
 gi|448326244|ref|ZP_21515611.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
 gi|429134550|gb|AFZ71561.1| ribosomal protein S4E [Natronobacterium gregoryi SP2]
 gi|445612901|gb|ELY66618.1| 30S ribosomal protein S4e [Natronobacterium gregoryi SP2]
          Length = 243

 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   E +PL+++LR+ L Y  + +E    L +  +LV+G+   D+  P G  D+
Sbjct: 26  KAGAGPH-GEEGVPLVVLLRDVLGYVDSTKEARYALSEDAILVNGEPINDEQRPIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+ P   E +R+  D  GR  L  +  + A+ +L K+ S Q    G   +  +DG  +  
Sbjct: 85  VAFPGREEYYRVFPDEGGRLSLTGIDADSAESRLGKIESKQQVSGGDTQLTLHDGTNVIA 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D      D+I +D ++  I     ++ G +V    G + G++G I++ E   GS
Sbjct: 145 DDDGYSTTDSIVVDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEIESIEVTPGS 199


>gi|448489452|ref|ZP_21607675.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
           19288]
 gi|445694824|gb|ELZ46942.1| 30S ribosomal protein S4e, partial [Halorubrum californiensis DSM
           19288]
          Length = 214

 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL+++LR+ L Y  + +E    L    +LV+G   +D+  P G  D+
Sbjct: 26  KAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSILVNGDAISDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P+  E FR+  D  GR  L  + ++ A  +L K+ +      G+  +  +DG  +R 
Sbjct: 85  LAFPERGEYFRVFPDEGGRLALTPVDEDAAGSRLGKITNKTVVPGGVVQLTLHDGTNVRV 144

Query: 172 PDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    + ND+I +D E  +I    +++ G +V    G++ G++G I + +   GS
Sbjct: 145 DDDADYETNDSIVVDNETKEIVAHFEYEEGALVTAVAGQHAGQIGEIDDIDVTLGS 200


>gi|257053371|ref|YP_003131204.1| 30S ribosomal protein S4e [Halorhabdus utahensis DSM 12940]
 gi|256692134|gb|ACV12471.1| Ribosomal protein S4E, central domain protein [Halorhabdus
           utahensis DSM 12940]
          Length = 286

 Score = 84.0 bits (206), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y  + +E    L Q  VL++G   +D+T P G  D+
Sbjct: 26  KADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFALDQDQVLINGDPESDETRPVGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++  +  E +R+     GR  L  + ++ A+ KL K+   QF   G   +  +DG T+  
Sbjct: 85  LAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKIVGKQFVPGGDLQLTLHDGETLLV 144

Query: 172 -PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
             D   + ND++ ++ +  +I    +++ G +V    G++ G +G I+  +   GS E 
Sbjct: 145 SEDAPYEGNDSVVVENDSEEIVAHFEYEEGALVTAVDGQHAGEIGTIEEIQVTPGSAEN 203


>gi|414587464|tpg|DAA38035.1| TPA: putative ribosomal protein S4 (RPS4A) family protein [Zea
           mays]
          Length = 171

 Score = 84.0 bits (206), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 65/145 (44%), Gaps = 63/145 (43%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           +QRHVLVDGK+              S P   +       T G FRLH +RDE+AKFKLC 
Sbjct: 70  LQRHVLVDGKM--------------SFPPLRQT-----RTTGCFRLHPIRDEDAKFKLCN 110

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
            RS+Q                                            FDV N+VMVTG
Sbjct: 111 GRSIQ--------------------------------------------FDVDNVVMVTG 126

Query: 208 GRNRGRVGIIKNREKHKGSFETIHI 232
           GRN GRVG+IKN EKHKG FE I +
Sbjct: 127 GRNTGRVGVIKNWEKHKGIFEVIDV 151


>gi|281343266|gb|EFB18850.1| hypothetical protein PANDA_013892 [Ailuropoda melanoleuca]
          Length = 283

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 70  LRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKG 129
           LRNRLK +LT  E   I  Q+ + +  K RTD        D     KT ENF L+ DTK 
Sbjct: 67  LRNRLKDSLTGNEGKKICTQQFIKIKCKGRTDSPLRCFREDQPD--KTEENFYLICDTKR 124

Query: 130 RFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLE 187
            F +     EEAK++LCKVR++    KGIP++ T+D  TI  PD LI   D I+++L+
Sbjct: 125 CFAVLPFAPEEAKYQLCKVRTILVCMKGIPHLVTHDACTICCPDSLINVKDAIQINLD 182


>gi|335437500|ref|ZP_08560276.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
 gi|335438897|ref|ZP_08561628.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
 gi|334890168|gb|EGM28442.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
 gi|334895848|gb|EGM34011.1| 30S ribosomal protein S4e [Halorhabdus tiamatea SARL4B]
          Length = 277

 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y  + +E    L Q  VL++G   +D+T P G  D+
Sbjct: 26  KADAGPH-GEAGVPLLIVLRDVLGYVDSRKEARFALDQDQVLINGDPESDETRPVGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++  +  E +R+     GR  L  + ++ A+ KL K+   QF   G   +  +DG T+  
Sbjct: 85  LAFTEREEFYRVFPGEGGRLALTPIDEDSAQSKLGKIVQKQFVPGGDLQLTLHDGETLLV 144

Query: 172 -PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET 229
             D   + ND+I ++ +  ++    +++ G +V    G++ G +G I+  +   GS E 
Sbjct: 145 SEDAPYEGNDSIVVENDSEEVIAHFEYEEGALVTAVDGQHAGEIGTIEEIQVTPGSAEN 203


>gi|452206436|ref|YP_007486558.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
 gi|452082536|emb|CCQ35794.1| 30S ribosomal protein S4e [Natronomonas moolapensis 8.8.11]
          Length = 269

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K ++GPH     +PL++VLR+ L YA + +E    L Q  VLV+GK  +D+  P G  D+
Sbjct: 26  KAAAGPH-GEAGVPLLIVLRDVLGYADSKKETRYALEQDSVLVNGKAVSDERQPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT----YDGR 167
           ++  +  E +R+  D  GR  L  +  E A  KL K+     G+  +P  +T    +DG+
Sbjct: 85  LAFREREEYYRVFPDEGGRLSLTPIDAESAGSKLGKI----VGKAQVPGGDTQLTLHDGQ 140

Query: 168 TIRYPDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           T+   D      ND+I +  +  +I     ++ G +V    G + GR+G I   +   GS
Sbjct: 141 TLLVEDATTYDGNDSIVVSNDAEEIVAHFTYEKGALVTAVSGAHAGRIGTIDEIQVTPGS 200

Query: 227 FETIHIQDALGHE 239
                + +A G E
Sbjct: 201 SPNNVLIEAAGGE 213


>gi|433590206|ref|YP_007279702.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
 gi|448332388|ref|ZP_21521632.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
 gi|433304986|gb|AGB30798.1| ribosomal protein S4E [Natrinema pellirubrum DSM 15624]
 gi|445627492|gb|ELY80816.1| 30S ribosomal protein S4e [Natrinema pellirubrum DSM 15624]
          Length = 232

 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   + +PL+++LR+ L Y  + +E    L +  +L++G    D+  P G  D+
Sbjct: 26  KADAGPH-GEDGVPLVVLLRDVLGYVDSRKEARYALSEDAILINGDAINDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+ P   E +R+  D  GR  L  + +E A+ +L K+   Q    G   +  +DG  +  
Sbjct: 85  VAFPGRGEYYRVFPDEGGRLALTEIDEESAQSRLGKIEGKQQVPGGDTQLTLHDGTNVLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D   +A D+I +D ++  I     ++ G +V    G + G++G +   +   GS
Sbjct: 145 DDDEYQAKDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEVDAIDVTPGS 199


>gi|124484921|ref|YP_001029537.1| 30S ribosomal protein S4e [Methanocorpusculum labreanum Z]
 gi|124362462|gb|ABN06270.1| SSU ribosomal protein S4E [Methanocorpusculum labreanum Z]
          Length = 239

 Score = 82.0 bits (201), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 6/202 (2%)

Query: 54  SSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVS 113
           SSGPH     LP+ + LR+ +++AL  +EV  IL  R VL++G + TD+       D++S
Sbjct: 27  SSGPHDG-SALPIGIWLRDHMQFALNTKEVRKILHDRQVLLNGHIVTDEHIGIDVFDIIS 85

Query: 114 IPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD 173
            PK ++++ +L D KGR   + +  + AK +L KV +    + G   IN   G      +
Sbjct: 86  FPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANKTTIKGGKTQINLTSGANF-IGE 144

Query: 174 PLIKANDTIKLDLEENK---ITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET- 229
              K  D++ + +  +    +     + VGN+ ++ GG++  + G +      + S    
Sbjct: 145 ENCKGKDSLVIGIAGDDRFAVQQHFPYAVGNMAIIIGGQHTMKTGKLVEILVQESSLPNR 204

Query: 230 IHIQDALGHEFATRLGNVFTIG 251
           + I+DA G++F T    V+ IG
Sbjct: 205 VIIEDADGNKFETIEDYVYMIG 226


>gi|409731012|ref|ZP_11272562.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
 gi|448724770|ref|ZP_21707275.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
 gi|445784979|gb|EMA35775.1| 30S ribosomal protein S4e [Halococcus hamelinensis 100A6]
          Length = 253

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 10/179 (5%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K ++GPH   + +PL+++LR+ L Y  + +E    L Q  VLV+ +  +D+  P G  D+
Sbjct: 26  KATAGPH-GEDGVPLLILLRDVLGYVDSRKEARYALNQGSVLVNNETLSDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT----YDGR 167
           V   + +E++R+  D  GR  L  +   +A  KL K+     G++ +P  NT    +DGR
Sbjct: 85  VEFAERDEHYRVFPDEGGRLALTPIDAADADSKLGKIE----GKRQVPGGNTQLSLHDGR 140

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
           T+   +     ND+I +D  +N+I     ++ G +V    G++ G +G I   +   GS
Sbjct: 141 TLEIDEGDYAGNDSIVVDT-DNEILAHFPYEEGALVTAVRGQHAGEIGEIDEIQVTPGS 198


>gi|354610525|ref|ZP_09028481.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
 gi|353195345|gb|EHB60847.1| 30S ribosomal protein S4e [Halobacterium sp. DL1]
          Length = 233

 Score = 81.6 bits (200), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 2/183 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y     E    +    VLV+G    D   P G  D+
Sbjct: 26  KAGAGPH-GESGVPLVVVLRDVLGYVDDTSEAQYAINTDGVLVNGASVGDVKRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P  +E +R+  D  GR  L  +  + A  KL KV        G   +N +DG  +  
Sbjct: 85  LAFPARDEYYRVFPDEGGRLGLTPIEADAADSKLNKVEDKTTVSGGQTQLNFHDGTNLLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE-TI 230
            D     +D++ ++ E N+I    +++ G +V    G++ G +G +++     GS E T+
Sbjct: 145 EDDSYSGSDSVVVENETNEIVAHFEYEEGALVTAVAGQHAGEIGTVEDITVQPGSAENTV 204

Query: 231 HIQ 233
            ++
Sbjct: 205 RVE 207


>gi|332796540|ref|YP_004458040.1| 30S ribosomal protein S4 [Acidianus hospitalis W1]
 gi|332694275|gb|AEE93742.1| ribosomal protein S4a [Acidianus hospitalis W1]
          Length = 238

 Score = 81.3 bits (199), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 15/209 (7%)

Query: 54  SSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVS 113
           S GPH   + +PL L+LR+ LK A T  E   ++ +  V VDG +R D  +P G MD++S
Sbjct: 27  SPGPHPLSKSIPLSLILRDYLKVAATLSEAKKVISEGKVYVDGIIRKDYRFPVGLMDIIS 86

Query: 114 IPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTI---- 169
           IP     + +  D         + + EAK+KL ++ +    + G   +N  DGR I    
Sbjct: 87  IPSAGLYYVMFPDKSRYISPKQISESEAKYKLVRIMNKTMIKGGKLQLNLEDGRNILVNK 146

Query: 170 ----RYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG-IIK-NREKH 223
               +YP        T+K+++    I            ++ GG+N G  G I+K  R ++
Sbjct: 147 EDSSKYP-----TLSTLKIEIPSQNIISVYPLVENMYGIIIGGKNTGLHGKIVKIQRAQY 201

Query: 224 KGSFETIHIQDALGHEFATRLGNVFTIGK 252
           K    +I         + T L N   IG+
Sbjct: 202 KTRKYSIVTIQKDNESYETNLLNTMVIGE 230


>gi|448369927|ref|ZP_21556380.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
 gi|445650367|gb|ELZ03291.1| 30S ribosomal protein S4e [Natrialba aegyptia DSM 13077]
          Length = 248

 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   E +PL+++LR+ L Y  + +E    L +  ++V+G+   D+  P G  D+
Sbjct: 26  KADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYALSEDSIIVNGEPINDEQRPIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E +R+  D  GR  L  + +E A  +L K+   Q    G   +  +DG T+  
Sbjct: 85  LAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLGKIDGKQQVPGGDTQLTLHDGTTVLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    A D++ +D E+  I     ++ G +V    G + G++G +++ +   GS
Sbjct: 145 DDEF-SAKDSVVVDNEDKSIVAHFPYEEGALVTAIRGNHGGKIGEVESIDVTPGS 198


>gi|448377818|ref|ZP_21560514.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
 gi|445655762|gb|ELZ08607.1| 30S ribosomal protein S4e [Halovivax asiaticus JCM 14624]
          Length = 244

 Score = 80.9 bits (198), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 2/180 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   + +PL+++LR+ L+Y    +E    L    VLV+G   +D+  P G  D+
Sbjct: 26  KAGAGPH-GEDGVPLLILLRDVLEYVDNRKEARYALANDAVLVNGDEISDEERPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E +R+  D  GR  L  +  E A+ +L KV   +    G+  ++ +DG  +  
Sbjct: 85  LAFPDREEAYRVFPDEGGRLSLTPIDAESAESRLGKVEGKRQVTGGVTQLSLHDGTNVTV 144

Query: 172 PDPLI-KANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETI 230
            D      ND++ +D E  +I     ++ G +V    G + G++G I   +   GS   I
Sbjct: 145 DDEATYGVNDSVVVDNESKEIVAHFPYEDGALVTAVRGNHAGKIGQIAEIDVTPGSGSNI 204


>gi|448350193|ref|ZP_21539012.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
 gi|445637700|gb|ELY90848.1| 30S ribosomal protein S4e [Natrialba taiwanensis DSM 12281]
          Length = 248

 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   E +PL+++LR+ L Y  + +E    L +  ++V+G+   D+  P G  D+
Sbjct: 26  KADAGPH-GEEGVPLVVLLRDVLGYVDSAKEARYALSEDSIIVNGEPINDEQRPIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E +R+  D  GR  L  + +E A  +L K+   Q    G   +  +DG T+  
Sbjct: 85  LAFPGRGEFYRVFPDEGGRLALTEIDEESADSRLGKIDGKQQVPGGDTQLTLHDGTTVLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D    A D++ +D E+  I     ++ G +V    G + G++G +++ +   GS
Sbjct: 145 DDEF-SAKDSVIVDNEDKSIVAHFPYEEGALVTAIRGNHGGKIGEVESIDVTPGS 198


>gi|355733706|gb|AES11115.1| ribosomal protein S4, Y-linked 2 [Mustela putorius furo]
          Length = 69

 Score = 80.5 bits (197), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 106 AGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYD 165
           AGFM V+S+ K  ENF  +YDTK RF LH +   EAK+KL KVR +  G KGIP++ T++
Sbjct: 1   AGFMAVISMDKPGENFLPIYDTKRRFALHRI-TLEAKYKLYKVRKIFVGTKGIPHLVTHE 59

Query: 166 GRTIRYPDPL 175
            RTIRYPDPL
Sbjct: 60  VRTIRYPDPL 69


>gi|345005643|ref|YP_004808496.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
 gi|344321269|gb|AEN06123.1| 30S ribosomal protein S4e [halophilic archaeon DL31]
          Length = 234

 Score = 80.5 bits (197), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 2/169 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L Y  + +E    L Q  VLV+G    D+  P G  D+
Sbjct: 26  KADAGPH-GESGVPLLIVLRDVLDYVDSRKEARYALNQDAVLVNGDAIADEARPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E FR+     GR  L  + +E    +L K+   Q    G   +  +DG T + 
Sbjct: 85  LAFPSREEFFRVFPGEGGRLALTPIDEESGSSRLGKITGKQQVSGGDFQLTLHDGTTTQV 144

Query: 172 PDPL-IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN 219
            D     AND++ +D E   I     ++ G +V    G++ G +G I +
Sbjct: 145 EDASDYSANDSLVVDNETKDIVAHFTYEEGALVTAVNGQHAGEIGEIDD 193


>gi|448323151|ref|ZP_21512615.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
 gi|445600337|gb|ELY54350.1| 30S ribosomal protein S4e [Natronococcus amylolyticus DSM 10524]
          Length = 236

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 1/191 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  SGPH   + +PL+++LR+ L Y  + +E    L Q  +L++G+   D+  P G  D+
Sbjct: 26  KADSGPH-GEDGVPLVVLLRDVLGYVDSKKEARYALSQDSILINGEPINDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+ P   E +R+  D  GR  L  +  + A  +L K+   +    G   +  +DG  I  
Sbjct: 85  VAFPGREEYYRVFPDEGGRLALTEIDADAADSRLGKIEGKRQVPGGDTQLTLHDGTNILA 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIH 231
            +     ND++ +D ++  +     ++ G +V    G + G++G +   +   GS   I 
Sbjct: 145 EESEYSTNDSVVVDNDDKSVVAHFPYEEGALVTAISGNHGGKIGEVTEIDVTPGSGSNIV 204

Query: 232 IQDALGHEFAT 242
             DA    F T
Sbjct: 205 TVDADDGLFET 215


>gi|448475298|ref|ZP_21603016.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
 gi|445816769|gb|EMA66656.1| 30S ribosomal protein S4e [Halorubrum aidingense JCM 13560]
          Length = 241

 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL+++LR+ L Y  + +E    L    VLV+G   +D+  P G  D+
Sbjct: 26  KAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           V+ P+  E FR+  D  GR  L  + ++ A  +L K+ +      G   +  +DG  +R 
Sbjct: 85  VAFPERGEFFRVFPDEGGRLALTPVDEDAAGSRLGKITNKAVVPGGDVQLTLHDGTNVRV 144

Query: 172 -PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             D      D+I +D E  ++    +++ G +V    G++ GR+G + + +   GS
Sbjct: 145 DADTPYDTKDSIIIDNESKEVVAHFEYEEGALVTAVAGQHAGRIGEVDDIDVTLGS 200


>gi|15790644|ref|NP_280468.1| 30S ribosomal protein S4 [Halobacterium sp. NRC-1]
 gi|169236383|ref|YP_001689583.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
 gi|17368985|sp|Q9HPC2.1|RS4E_HALSA RecName: Full=30S ribosomal protein S4e
 gi|226697782|sp|B0R668.1|RS4E_HALS3 RecName: Full=30S ribosomal protein S4e
 gi|10581171|gb|AAG19948.1| 30S ribosomal protein S4E [Halobacterium sp. NRC-1]
 gi|167727449|emb|CAP14237.1| 30S ribosomal protein S4e [Halobacterium salinarum R1]
          Length = 233

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL++VLR+ L+Y     E    +    VLV+G    D   P G  D+
Sbjct: 26  KAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P  +E +R+  D  GR  L  +  + A  KL KV        G   +N +DG  +  
Sbjct: 85  LAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLAL 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE-TI 230
            +      D++ +D + N+I    +++ G +V    G++ G +G I       GS   T+
Sbjct: 145 DEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNTV 204

Query: 231 HIQDALG 237
            + D  G
Sbjct: 205 RVDDENG 211


>gi|222480845|ref|YP_002567082.1| 30S ribosomal protein S4e [Halorubrum lacusprofundi ATCC 49239]
 gi|254764559|sp|B9LSR5.1|RS4E_HALLT RecName: Full=30S ribosomal protein S4e
 gi|222453747|gb|ACM58012.1| Ribosomal protein S4E, central domain protein [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 240

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL+++LR+ L Y  + +E    L    VLV+G   +D+  P G  D+
Sbjct: 26  KAGAGPH-GEAGVPLVVLLRDVLGYVDSTKEARYALNNDSVLVNGDAISDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P+  E FR+  D  GR  L S+ +E A  +L K+ +      G   +  +DG  +  
Sbjct: 85  LAFPERGEFFRVFPDEGGRLALTSVDEEAAGSRLGKITNKSVVPGGDAQLTLHDGTNVLV 144

Query: 172 -PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             D      D+I +D E   +    +++ G +V    G++ GR+G + + +   GS
Sbjct: 145 DADTEYDTKDSIVVDNESKDVVAHFEYEEGALVTAVAGQHAGRIGEVADIDVTLGS 200


>gi|448415407|ref|ZP_21578207.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
 gi|445681065|gb|ELZ33506.1| 30S ribosomal protein S4e [Halosarcina pallida JCM 14848]
          Length = 252

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 5/170 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH  +  +PL+++LR+ L YA + +E    L Q  VLV+G   +D++ P G  D+
Sbjct: 26  KAGAGPH-GQAGVPLLILLRDVLGYADSKKEARYALNQDTVLVNGDAVSDESRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++  +  E FR+  D  GR  L  +  E A  +L KV   Q  + G   +  +DG  +R 
Sbjct: 85  LAFTEREEYFRVFPDEGGRLALTPIDAESADSRLGKVAGKQSVKGGATQLTLHDGSNVRV 144

Query: 172 PDP----LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGII 217
            D        + D++ +D E  +I     ++ G +V    G + G +G +
Sbjct: 145 EDEDDPDQYHSKDSLVVDNETKEIVAHFPYEEGALVTAVDGTHAGEIGEV 194


>gi|448671527|ref|ZP_21687432.1| 30S ribosomal protein S4e [Haloarcula amylolytica JCM 13557]
 gi|445764989|gb|EMA16129.1| 30S ribosomal protein S4e [Haloarcula amylolytica JCM 13557]
          Length = 234

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   + +PL++VLR+ L YA   +E    L + +VL++GK  +D+  P G  D+
Sbjct: 26  KAGAGPH-GEDGVPLLIVLRDVLGYADNRKEARYALNEDNVLINGKAISDEERPVGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT-IR 170
           ++  +  E +R+     GR  L ++  + A+ KL K+ +      G   +  +DG T I 
Sbjct: 85  LAFTEREEYYRVFPGEGGRLALTAIDPDAAESKLGKIVTKTHVSGGDVQLGLHDGETLIV 144

Query: 171 YPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
             D    A D+I +  E+ +I    +++ G +V    G + G VG I+  +   GS
Sbjct: 145 EDDQTYDAGDSIVVGNEDGEIVAHFEYEEGALVTAVDGAHAGEVGEIEEIQVTPGS 200


>gi|413950057|gb|AFW82706.1| hypothetical protein ZEAMMB73_177941 [Zea mays]
          Length = 395

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 62/141 (43%), Gaps = 63/141 (44%)

Query: 88  MQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK 147
           +QRH+LVDG            M   S+ +T         T   FRLH +RDE+AKFKLC 
Sbjct: 298 LQRHILVDG-----------MMSFPSLRQTR--------TTSCFRLHPIRDEDAKFKLCN 338

Query: 148 VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTG 207
            RSVQ                                            FDV N+VMV G
Sbjct: 339 GRSVQ--------------------------------------------FDVDNVVMVAG 354

Query: 208 GRNRGRVGIIKNREKHKGSFE 228
           GRN GRVG+IKNREKHKG FE
Sbjct: 355 GRNIGRVGVIKNREKHKGIFE 375


>gi|448399322|ref|ZP_21570624.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
 gi|445669229|gb|ELZ21842.1| 30S ribosomal protein S4e [Haloterrigena limicola JCM 13563]
          Length = 232

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH  ++ +PL+++LR+ L Y  + +E    L +  +LV+G    D+  P G  D+
Sbjct: 26  KAGAGPH-GQDGVPLVVLLRDVLGYVDSRKEARYALSEDAILVNGDAINDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E +R+  D  GR  L ++ ++ A+ +L K+   Q    G   +  +DG  +  
Sbjct: 85  IAFPGREEYYRVFPDEGGRLALTAIDEDAAQSRLGKIEGKQQIPGGDTQLTLHDGTNVLV 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGS 226
            D      D+I +D ++  I     ++ G +V    G + G++G I   +   GS
Sbjct: 145 EDDEYDTRDSIVIDNDDKSIVAHFPYEEGALVTAVRGNHGGKIGEIDAIDITPGS 199


>gi|110668729|ref|YP_658540.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
 gi|109626476|emb|CAJ52937.1| 30S ribosomal protein S4e [Haloquadratum walsbyi DSM 16790]
          Length = 265

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 4/180 (2%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH     +PL+++LR+ L YA + +E    L QR VLV+G V +D+  P G  D+
Sbjct: 26  KAGAGPH-GESGVPLVILLRDVLGYADSKKEARYALNQRSVLVNGDVVSDEQRPVGLFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++  +  E +R+  +  GR  L  +   +A  +L K+ + Q    G   +  +DG  IR 
Sbjct: 85  LAFTEREEYYRVFPEAGGRLALTPIDISDANSRLGKIINKQQVSGGAIQLTLHDGANIRV 144

Query: 172 -PDPLIKAN--DTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFE 228
             D +   N  D++ +D E  +I     ++ G +V    G++ G +G I+      GS E
Sbjct: 145 NADEIDTYNPRDSLVIDNETKEIVAHFPYEEGALVTAVSGKHSGEIGEIETITVTAGSSE 204


>gi|448358816|ref|ZP_21547490.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
 gi|445644496|gb|ELY97509.1| 30S ribosomal protein S4e [Natrialba chahannaoensis JCM 10990]
          Length = 232

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 14/193 (7%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   E +PL+++LR+ L Y  + +E    L +  +LV+G+   D+  P G  D+
Sbjct: 26  KAGAGPH-GEEGVPLVVLLRDVLGYVDSKKEARYALSEDSILVNGEPINDEQRPIGIFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRY 171
           ++ P   E +R+  D  GR  L  +  E A  +L K+   Q    G   +  +DG  +  
Sbjct: 85  IAFPGREEFYRVFPDEGGRLALTEIDAESADSRLGKIAGKQQIPGGDTQLTLHDGTNVLI 144

Query: 172 PDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKN------------ 219
            +    A D+I +D ++  I     ++ G +V    G + G++G I              
Sbjct: 145 DEDDYSAKDSIVVDNDDKSIAAHFPYEEGALVTAVRGNHGGKIGEIAEIEVTQSSGSNIV 204

Query: 220 -REKHKGSFETIH 231
             E   G+FET+ 
Sbjct: 205 TVETDDGAFETVE 217


>gi|435848736|ref|YP_007310986.1| ribosomal protein S4E [Natronococcus occultus SP4]
 gi|433675004|gb|AGB39196.1| ribosomal protein S4E [Natronococcus occultus SP4]
          Length = 245

 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 9/183 (4%)

Query: 52  KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDV 111
           K  +GPH   + +PL+++LR+ L Y  + +E    L Q  +LV+G+   D+  P G  D+
Sbjct: 26  KADAGPH-GEDGVPLVVLLRDVLGYVDSKKEARYALSQDSILVNGEPINDEQRPIGMFDI 84

Query: 112 VSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINT----YDGR 167
           V+ P   E +R+  D  GR  L ++  + A  +L K+     G++ +P  +T    +DG 
Sbjct: 85  VAFPGREEYYRVFPDEGGRLALTAIDADAADSRLGKIE----GKRQVPGGDTQLTLHDGT 140

Query: 168 TIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSF 227
            I   D     ND+I +D ++  +     ++ G +V    G + G++G +   +   GS 
Sbjct: 141 NILAEDDEYDTNDSIVVDNDDKSVVAHFPYEEGALVTAVRGNHGGKIGEVTEIDVTPGSG 200

Query: 228 ETI 230
             I
Sbjct: 201 SNI 203


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.140    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,363,621,371
Number of Sequences: 23463169
Number of extensions: 181311054
Number of successful extensions: 360826
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 359272
Number of HSP's gapped (non-prelim): 1146
length of query: 284
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 143
effective length of database: 9,050,888,538
effective search space: 1294277060934
effective search space used: 1294277060934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)