Your job contains 1 sequence.
>023290
MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV
AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV
PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA
WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH
VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023290
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018392 - symbol:AT1G75420 species:3702 "Arabi... 1095 6.8e-111 1
TAIR|locus:2013089 - symbol:AT1G19710 species:3702 "Arabi... 1061 2.7e-107 1
TAIR|locus:2093925 - symbol:AT3G15940 species:3702 "Arabi... 275 1.4e-30 3
TAIR|locus:2018144 - symbol:AT1G52420 species:3702 "Arabi... 248 3.0e-26 2
TIGR_CMR|BA_1558 - symbol:BA_1558 "glycosyl transferase, ... 159 2.4e-09 1
TIGR_CMR|CHY_1134 - symbol:CHY_1134 "glycosyl transferase... 154 9.5e-09 1
TIGR_CMR|CPS_4999 - symbol:CPS_4999 "glycosyl transferase... 151 2.0e-08 1
UNIPROTKB|Q47WI9 - symbol:CPS_4182 "Putative lipopolysacc... 144 1.4e-07 1
TIGR_CMR|CPS_4182 - symbol:CPS_4182 "putative lipopolysac... 144 1.4e-07 1
TIGR_CMR|CHY_1814 - symbol:CHY_1814 "glycosyltransferase,... 139 5.4e-07 1
TIGR_CMR|GSU_2253 - symbol:GSU_2253 "glycosyl transferase... 129 8.1e-06 1
TIGR_CMR|CPS_5001 - symbol:CPS_5001 "glycosyl transferase... 125 2.3e-05 1
TIGR_CMR|CHY_0668 - symbol:CHY_0668 "glycosyl transferase... 121 7.5e-05 1
FB|FBgn0035401 - symbol:CG1291 species:7227 "Drosophila m... 116 0.00031 1
UNIPROTKB|F1NWX1 - symbol:ALG2 "Uncharacterized protein" ... 113 0.00062 1
UNIPROTKB|Q8ECG6 - symbol:SO_3176 "O-antigen biosynthesis... 112 0.00073 1
TIGR_CMR|SO_3176 - symbol:SO_3176 "glycosyl transferase, ... 112 0.00073 1
UNIPROTKB|Q0C680 - symbol:HNE_0029 "Glycosyl transferase,... 111 0.00084 1
>TAIR|locus:2018392 [details] [associations]
symbol:AT1G75420 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0009058 GO:GO:0005768
GO:GO:0016740 GO:GO:0005802 eggNOG:COG0438 CAZy:GT4
HOGENOM:HOG000237742 ProtClustDB:CLSN2682518 EMBL:BT008621
EMBL:AK229704 IPI:IPI00547866 RefSeq:NP_177675.1 UniGene:At.34777
ProteinModelPortal:Q7Y217 PRIDE:Q7Y217 EnsemblPlants:AT1G75420.1
GeneID:843878 KEGG:ath:AT1G75420 TAIR:At1g75420 InParanoid:Q7Y217
OMA:AFHESLE PhylomeDB:Q7Y217 ArrayExpress:Q7Y217
Genevestigator:Q7Y217 Uniprot:Q7Y217
Length = 463
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 214/269 (79%), Positives = 234/269 (86%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYF D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEV
Sbjct: 179 MRGHYFNADLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEV 238
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXV 120
AED+VAKRVLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ES V
Sbjct: 239 AEDSVAKRVLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQV 298
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
P++HAV++GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA
Sbjct: 299 PTMHAVVVGSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQA 358
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAF+LPVLGTAAGGT EIVVNGTTGLLH GKEG+ PLAKNIVKLAT
Sbjct: 359 RGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQ 418
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIA 269
VE RL MGK GYERVKE+F EHHM+ RIA
Sbjct: 419 VELRLRMGKNGYERVKEMFLEHHMSHRIA 447
>TAIR|locus:2013089 [details] [associations]
symbol:AT1G19710 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
Pfam:PF00534 EMBL:CP002684 GO:GO:0005794 GO:GO:0009058
GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 EMBL:BT029163
EMBL:AK176210 EMBL:AK176263 IPI:IPI00537818 RefSeq:NP_173401.1
UniGene:At.41737 UniGene:At.47209 ProteinModelPortal:Q67Z55
PRIDE:Q67Z55 EnsemblPlants:AT1G19710.1 GeneID:838559
KEGG:ath:AT1G19710 TAIR:At1g19710 HOGENOM:HOG000237742
InParanoid:Q67Z55 OMA:SEVVWIT PhylomeDB:Q67Z55
ProtClustDB:CLSN2682518 ArrayExpress:Q67Z55 Genevestigator:Q67Z55
Uniprot:Q67Z55
Length = 479
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 209/270 (77%), Positives = 232/270 (85%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFK D VKHLP VAGAMIDSH TAEYWKNRT +RL IKMP TYVVHLGNSKELMEV
Sbjct: 189 MRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYVVHLGNSKELMEV 248
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXX- 119
AED+ AK VLRE VRESLGVRNED+LF IINSVSRGKGQDLFL +F+ES
Sbjct: 249 AEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKVIKETKKLE 308
Query: 120 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 179
VP++HAV++GSDM+AQTKFE+ELRN+V + K+Q VHFVNKT+ VAPYLAAIDVLVQNSQ
Sbjct: 309 VPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAIDVLVQNSQ 368
Query: 180 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239
A GECFGRITIEAMAF+LPVLGTAAGGT EIVVN TTGLLH GK+G+ PLAKNIVKLAT
Sbjct: 369 ARGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNTGKDGVLPLAKNIVKLAT 428
Query: 240 HVERRLTMGKRGYERVKEIFQEHHMAERIA 269
+V+ R TMGK+GYERVKE+F EHHM+ RIA
Sbjct: 429 NVKMRNTMGKKGYERVKEMFLEHHMSHRIA 458
>TAIR|locus:2093925 [details] [associations]
symbol:AT3G15940 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001666 "response
to hypoxia" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] InterPro:IPR001296 Pfam:PF00534
GO:GO:0005794 EMBL:CP002686 GO:GO:0009058 GO:GO:0016740 CAZy:GT4
EMBL:AB026653 EMBL:AY091763 EMBL:AJ507211 IPI:IPI00545618
RefSeq:NP_001189906.1 RefSeq:NP_188215.1 UniGene:At.38967
ProteinModelPortal:Q9LSB5 STRING:Q9LSB5 PRIDE:Q9LSB5
EnsemblPlants:AT3G15940.1 EnsemblPlants:AT3G15940.2 GeneID:820838
KEGG:ath:AT3G15940 TAIR:At3g15940 HOGENOM:HOG000090291
InParanoid:Q9LSB5 OMA:QWFRSNR PhylomeDB:Q9LSB5
ProtClustDB:CLSN2679727 Genevestigator:Q9LSB5 Uniprot:Q9LSB5
Length = 697
Score = 275 (101.9 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 61/141 (43%), Positives = 88/141 (62%)
Query: 128 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 186
+GS N + + E+ +++ + + V + T VA +A DV V NSQ GE FG
Sbjct: 547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605
Query: 187 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246
R+TIEAMA+ LPVLGT AGGT EIV + TGLLHPVG+ G LA+N++ L + RL
Sbjct: 606 RVTIEAMAYGLPVLGTDAGGTKEIVEHNVTGLLHPVGRAGNKVLAQNLLFLLRNPSTRLQ 665
Query: 247 MGKRGYERVKEIFQEHHMAER 267
+G +G E V++++ + HM +R
Sbjct: 666 LGSQGREIVEKMYMKQHMYKR 686
Score = 77 (32.2 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 67 KRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 105
++ LRE VR G+ ++D+L ++S++ GKGQ L L S
Sbjct: 419 RQKLRESVRTEFGLTDKDMLVMSLSSINPGKGQLLLLES 457
Score = 45 (20.9 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 63 DNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK 97
++VA + RE +E + RN+ + +N + + K
Sbjct: 456 ESVALALEREQTQEQVAKRNQSKIIKNLNGIRKEK 490
Score = 38 (18.4 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 46 TYVVHLGNSKEL-MEVA--EDNVAKR 68
T +VHLG +K + + +A ED+ ++R
Sbjct: 124 TNIVHLGVNKRMHVTLAKKEDSTSRR 149
Score = 38 (18.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 59 EVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 105
E ++ VAKR + ++ G+R E + + + + RG + + + S
Sbjct: 465 EQTQEQVAKRNQSKIIKNLNGIRKEKISLSARHRL-RGSSRKMKITS 510
>TAIR|locus:2018144 [details] [associations]
symbol:AT1G52420 species:3702 "Arabidopsis thaliana"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 Pfam:PF00534 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009058 GO:GO:0016740 EMBL:AC037424
eggNOG:COG0438 CAZy:GT4 EMBL:AC008016 HOGENOM:HOG000090291
ProtClustDB:CLSN2679727 EMBL:BT002514 EMBL:BT008418 EMBL:AK227148
IPI:IPI00539314 PIR:E96564 RefSeq:NP_175651.1 UniGene:At.43422
ProteinModelPortal:Q9SSP6 PaxDb:Q9SSP6 PRIDE:Q9SSP6
EnsemblPlants:AT1G52420.1 GeneID:841673 KEGG:ath:AT1G52420
TAIR:At1g52420 InParanoid:Q9SSP6 OMA:CEEEHIK PhylomeDB:Q9SSP6
ArrayExpress:Q9SSP6 Genevestigator:Q9SSP6 Uniprot:Q9SSP6
Length = 670
Score = 248 (92.4 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 128 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 186
+GS N + + E+ +++ + V + T VA +A DV V NSQ GE FG
Sbjct: 520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578
Query: 187 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246
R+TIEAMA+ L V+GT AGGT E+V + TGLLH +G+ G LA N++ L + + RL
Sbjct: 579 RVTIEAMAYGLAVVGTDAGGTKEMVQHNMTGLLHSMGRSGNKELAHNLLYLLRNPDERLR 638
Query: 247 MGKRGYERVKEIFQEHHMAER 267
+G G + V++++ + HM +R
Sbjct: 639 LGSEGRKMVEKMYMKQHMYKR 659
Score = 82 (33.9 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 65 VAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHS 105
V +++LRE VR LG+ + D+L ++S++ KGQ L L S
Sbjct: 415 VKRQILRESVRTELGITDSDMLVMSLSSINPTKGQLLLLES 455
>TIGR_CMR|BA_1558 [details] [associations]
symbol:BA_1558 "glycosyl transferase, group 1 family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016740
CAZy:GT4 HOGENOM:HOG000077287 InterPro:IPR023881 TIGRFAMs:TIGR03999
RefSeq:NP_844008.1 RefSeq:YP_018181.1 RefSeq:YP_027714.1 PDB:2JJM
PDB:3MBO PDBsum:2JJM PDBsum:3MBO ProteinModelPortal:Q81ST7
DNASU:1086392 EnsemblBacteria:EBBACT00000010235
EnsemblBacteria:EBBACT00000017248 EnsemblBacteria:EBBACT00000022563
GeneID:1086392 GeneID:2815635 GeneID:2850809 KEGG:ban:BA_1558
KEGG:bar:GBAA_1558 KEGG:bat:BAS1445 OMA:EYGIREN
ProtClustDB:CLSK2391390 BioCyc:BANT260799:GJAJ-1519-MONOMER
BioCyc:BANT261594:GJ7F-1582-MONOMER EvolutionaryTrace:Q81ST7
Uniprot:Q81ST7
Length = 381
Score = 159 (61.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 210
I+DRV F+ K VA LA D+++ S+ E FG + +EAMA +P +GT GG E+
Sbjct: 252 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEV 309
Query: 211 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
+ +G TG L VG T +A ++L E MG+R E V E F+ + +
Sbjct: 310 IQHGDTGYLCEVGDT--TGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQ 364
>TIGR_CMR|CHY_1134 [details] [associations]
symbol:CHY_1134 "glycosyl transferase, group 1 family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016740
eggNOG:COG0438 CAZy:GT4 RefSeq:YP_359980.1
ProteinModelPortal:Q3AD04 STRING:Q3AD04 GeneID:3726576
KEGG:chy:CHY_1134 PATRIC:21275408 HOGENOM:HOG000077287 OMA:YLPITRF
BioCyc:CHYD246194:GJCN-1133-MONOMER InterPro:IPR023881
TIGRFAMs:TIGR03999 Uniprot:Q3AD04
Length = 378
Score = 154 (59.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 144 NYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203
N V +K + ++V F+ K V+ L+ DVL+ S+ E FG + +EAMA ++PV+
Sbjct: 247 NEVQKKNLTNKVKFLGKMPKVSDVLSISDVLLITSET--ESFGLVALEAMAMEVPVVAYR 304
Query: 204 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE 261
GG E+VV+G TG L V + A+ +VKL + G+ G R KE F +
Sbjct: 305 VGGLPEVVVDGQTGYL--VDYLDLEKAAEAVVKLLKEPWLKRDFGRWGRIRAKERFSK 360
>TIGR_CMR|CPS_4999 [details] [associations]
symbol:CPS_4999 "glycosyl transferase, group 1 family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0438 CAZy:GT4
RefSeq:YP_271638.1 ProteinModelPortal:Q47U85 STRING:Q47U85
DNASU:3523069 GeneID:3523069 KEGG:cps:CPS_4999 PATRIC:21472785
OMA:CISKPES BioCyc:CPSY167879:GI48-5000-MONOMER Uniprot:Q47U85
Length = 367
Score = 151 (58.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 54/193 (27%), Positives = 84/193 (43%)
Query: 75 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNA 134
R LG+ + L+ I + KG H ++ +P++H I G D A
Sbjct: 179 RADLGIPLDQLMLLSIGHLGEIKG-----HQ--DTLVALSKFTKTMPALHLYIAG-DGAA 230
Query: 135 QTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 194
Q K +L V + +I + V F+ + +L A D+ +Q S E FG + +EA A
Sbjct: 231 QEK--QKLTELVNKLQINENVTFLGQINNAFSWLEACDIFIQPSVE--EAFGLVFVEAGA 286
Query: 195 FQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254
PV+ T GG EI+V+ TGLL V + + L R G+ GY+R
Sbjct: 287 KAKPVIATTVGGIKEIIVSKETGLL--VLPSSPKAVEHALAILINSPPLRQQYGENGYKR 344
Query: 255 VKEIFQEHHMAER 267
+ E F +M +
Sbjct: 345 ITEHFSLTNMVNK 357
>UNIPROTKB|Q47WI9 [details] [associations]
symbol:CPS_4182 "Putative lipopolysaccharide core
biosynthesis mannosyltransferase" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000030 "mannosyltransferase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009244
eggNOG:COG0438 CAZy:GT4 GO:GO:0000030 RefSeq:YP_270833.1
ProteinModelPortal:Q47WI9 STRING:Q47WI9 DNASU:3523255
GeneID:3523255 KEGG:cps:CPS_4182 PATRIC:21471227
HOGENOM:HOG000065557 OMA:RKQKGVH ProtClustDB:CLSK881566
BioCyc:CPSY167879:GI48-4192-MONOMER Uniprot:Q47WI9
Length = 364
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 88 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 147
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 148 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295
Query: 206 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 265
E+V G G + P+ + + + + L E+ + MG+ G ERV E H+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349
Query: 266 ERIA 269
ER A
Sbjct: 350 EREA 353
>TIGR_CMR|CPS_4182 [details] [associations]
symbol:CPS_4182 "putative lipopolysaccharide core
biosynthesis mannosyltransferase" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000030 "mannosyltransferase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] InterPro:IPR001296 Pfam:PF00534
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009244
eggNOG:COG0438 CAZy:GT4 GO:GO:0000030 RefSeq:YP_270833.1
ProteinModelPortal:Q47WI9 STRING:Q47WI9 DNASU:3523255
GeneID:3523255 KEGG:cps:CPS_4182 PATRIC:21471227
HOGENOM:HOG000065557 OMA:RKQKGVH ProtClustDB:CLSK881566
BioCyc:CPSY167879:GI48-4192-MONOMER Uniprot:Q47WI9
Length = 364
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 88 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 147
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 148 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295
Query: 206 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 265
E+V G G + P+ + + + + L E+ + MG+ G ERV E H+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349
Query: 266 ERIA 269
ER A
Sbjct: 350 EREA 353
>TIGR_CMR|CHY_1814 [details] [associations]
symbol:CHY_1814 "glycosyltransferase, group 1 family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016740
eggNOG:COG0438 CAZy:GT4 RefSeq:YP_360634.1
ProteinModelPortal:Q3AB50 STRING:Q3AB50 GeneID:3726547
KEGG:chy:CHY_1814 PATRIC:21276735 HOGENOM:HOG000077290 OMA:VMAKETN
BioCyc:CHYD246194:GJCN-1813-MONOMER Uniprot:Q3AB50
Length = 369
Score = 139 (54.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 123 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 182
V IIG D ++EL+ + I+ V F A + ID+ V S + G
Sbjct: 223 VFRAIIGGD----GPLKNELKELAKELGIESLVTFPGYIPNPAEFYREIDIFVLPSISEG 278
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE 242
+EAM+++L V+ T GG E++ +G GLL P K+ T L + + L +
Sbjct: 279 LPLS--LLEAMSWKLAVIATNVGGIPEVINSGENGLLVPP-KDA-TALTEALYTLIFNEN 334
Query: 243 RRLTMGKRGYERVKEIFQEHHMAER 267
RL++G+R Y ++E + HMA+R
Sbjct: 335 FRLSLGERAYITIREKYNVAHMAQR 359
>TIGR_CMR|GSU_2253 [details] [associations]
symbol:GSU_2253 "glycosyl transferase, group 1 family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 GO:GO:0016740
EMBL:AE017180 GenomeReviews:AE017180_GR HOGENOM:HOG000077290
RefSeq:NP_953302.1 ProteinModelPortal:Q74AU7 GeneID:2687490
KEGG:gsu:GSU2253 PATRIC:22027361 OMA:DSWVGAI
BioCyc:GSUL243231:GH27-2240-MONOMER Uniprot:Q74AU7
Length = 371
Score = 129 (50.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS V+ GS + + LR++ + + D V + V LA DV V S
Sbjct: 222 PSARLVLAGSGW-----YVANLRSFAEEAGVTDLVDCPGEREDVPALLANTDVFVLPSSM 276
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
E FG +EAMA +PV+ T GG EIV +G G+ PVG +A I+++
Sbjct: 277 --EPFGMSPVEAMAAGVPVVVTRTGGLAEIVTDGVDGIQVPVGDP--PAIADAIIRICND 332
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERI 268
+ R + G R + F E E +
Sbjct: 333 RQLRDRLAAAGLRRASD-FDEARAIEAL 359
>TIGR_CMR|CPS_5001 [details] [associations]
symbol:CPS_5001 "glycosyl transferase, group 1 family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0438 CAZy:GT4
RefSeq:YP_271640.1 ProteinModelPortal:Q47U83 STRING:Q47U83
GeneID:3522034 KEGG:cps:CPS_5001 PATRIC:21472789 OMA:AVVATEH
BioCyc:CPSY167879:GI48-5002-MONOMER Uniprot:Q47U83
Length = 365
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 45/187 (24%), Positives = 81/187 (43%)
Query: 67 KRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAV 126
+++ +E +E L + I+ +S K L + + P + +
Sbjct: 174 EQIPKELAKEKLSISQSTFCVGIVARLSEPKDHLLLIDAI-------AAISKTFPDIKLI 226
Query: 127 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 186
I+G Q K E+ Y+ +++ V + + +A L A+DV S + G
Sbjct: 227 IVGGGP-LQNKIET----YIKANHLENIVTMLGERKDIANILNALDVFALTSSSEG--IP 279
Query: 187 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL-HPVGKEGITPLAKNIVKLATHVERRL 245
+EAMA LPV+ T GG ++V+N TG+L K G+ ++ +K ++L
Sbjct: 280 MTILEAMAANLPVIATNVGGIPQVVLNNETGILVENKDKAGLITAIESFIKSP----KKL 335
Query: 246 T-MGKRG 251
T GK+G
Sbjct: 336 TEYGKQG 342
>TIGR_CMR|CHY_0668 [details] [associations]
symbol:CHY_0668 "glycosyl transferase, group 1 family"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR001296 Pfam:PF00534 GO:GO:0009058
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016757
eggNOG:COG0438 CAZy:GT4 KO:K00754 RefSeq:YP_359523.1 STRING:Q3AEB1
GeneID:3727727 KEGG:chy:CHY_0668 PATRIC:21274471
HOGENOM:HOG000273812 OMA:VIFHPAR ProtClustDB:CLSK824379
BioCyc:CHYD246194:GJCN-668-MONOMER Uniprot:Q3AEB1
Length = 396
Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 135 QTKFESELRNYVMQKKIQDRVH--FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEA 192
Q K E+ V + + D+V+ F N Y A D+ + S ++ E FG + +EA
Sbjct: 255 QQKEVQEIMKLVEEYGLSDKVYVQFFNWQEIHWMYEIA-DICIYPS-SFEEPFGLVMLEA 312
Query: 193 MAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252
MA P++ T +GG E+V +G G + P K+ + LA+ ++ L E R MG+ G
Sbjct: 313 MASGKPIIVTNSGGMPEVVQDGVNGFVIP--KKDASALARKLILLLEDDELRRRMGESGR 370
Query: 253 ERVKEIF 259
+ +E F
Sbjct: 371 KLAEEKF 377
>FB|FBgn0035401 [details] [associations]
symbol:CG1291 species:7227 "Drosophila melanogaster"
[GO:0004376 "glycolipid mannosyltransferase activity" evidence=ISS]
[GO:0004378 "GDP-Man:Man1GlcNAc2-PP-Dol
alpha-1,3-mannosyltransferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0033164 "glycolipid
6-alpha-mannosyltransferase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IDA] InterPro:IPR001296
InterPro:IPR027054 Pfam:PF00534 GO:GO:0009058 GO:GO:0005811
eggNOG:COG0438 CAZy:GT4 PANTHER:PTHR12526:SF22 EMBL:AY060893
ProteinModelPortal:Q95SA2 SMR:Q95SA2 STRING:Q95SA2 PaxDb:Q95SA2
PRIDE:Q95SA2 FlyBase:FBgn0035401 InParanoid:Q95SA2
OrthoDB:EOG49GHZ3 ArrayExpress:Q95SA2 Bgee:Q95SA2 Uniprot:Q95SA2
Length = 424
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 48/188 (25%), Positives = 77/188 (40%)
Query: 86 LFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGS-DMNAQTKFE--SEL 142
++ IN R K L LHS +I G D E +EL
Sbjct: 224 IYLDINRYERKKNHALALHSL--RLLGDMLPATEFKRCRLIIAGGYDTRCMENVEHFAEL 281
Query: 143 RNYVMQKKIQDRVHFVNKTLTVAP--YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200
+ + K+QD V + L A L+ + E FG + +E M PV+
Sbjct: 282 EHLTEELKLQDHVVLLRSPTDEEKCRLLFAAHCLLYTPE--NEHFGIVPLEGMYCSKPVV 339
Query: 201 GTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ 260
+GG TE VVN +TG L ++ +++L + R+ MG +G++RV++ F
Sbjct: 340 ALNSGGPTETVVNTSTGFLCEKTEKSF---GGAMLQLFRDEQLRVKMGDQGHKRVQQKFS 396
Query: 261 EHHMAERI 268
A+R+
Sbjct: 397 FQAFADRL 404
>UNIPROTKB|F1NWX1 [details] [associations]
symbol:ALG2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004378 "GDP-Man:Man1GlcNAc2-PP-Dol
alpha-1,3-mannosyltransferase activity" evidence=IEA] [GO:0033164
"glycolipid 6-alpha-mannosyltransferase activity" evidence=IEA]
[GO:0000033 "alpha-1,3-mannosyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006488 "dolichol-linked
oligosaccharide biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0033577 "protein glycosylation in
endoplasmic reticulum" evidence=IEA] [GO:0043495 "protein anchor"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051592 "response to calcium ion" evidence=IEA]
InterPro:IPR001296 InterPro:IPR027054 Pfam:PF00534 GO:GO:0005783
GO:GO:0005634 GO:GO:0048471 GO:GO:0051592 GO:GO:0006488
PANTHER:PTHR12526:SF22 OMA:KIWTAHY GO:GO:0000033 GO:GO:0033577
GeneTree:ENSGT00550000075033 EMBL:AADN02008308 IPI:IPI00594490
Ensembl:ENSGALT00000022094 Uniprot:F1NWX1
Length = 398
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 49/189 (25%), Positives = 80/189 (42%)
Query: 86 LFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGS-DMNAQTKFE--SEL 142
LF IN R K L L + +E VH V+ G D E EL
Sbjct: 209 LFLSINRYERKKNLALALEALHELRGRLDSHQWS--EVHLVMAGGYDKRVLENVEHYEEL 266
Query: 143 RNYVMQKKIQDRVHFVNKTLTVAPYLAAID--VLVQNSQAWGECFGRITIEAMAFQLPVL 200
R + + D V F+ ++ T ++ ++ V V + + E FG + +EAM + PV+
Sbjct: 267 RGIAAKLNVSDHVTFL-RSFTDEQKVSLLNNCVCVLYTPS-NEHFGIVPLEAMYMRRPVI 324
Query: 201 GTAAGGTTEIVVNGTTGLL-HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 259
+GG E ++N TG L P+ T ++ + K+ + +MG G R E F
Sbjct: 325 AVNSGGPLESILNNVTGFLCDPLP----TQFSEAMEKIVRDPLLKDSMGAAGRVRFMEKF 380
Query: 260 QEHHMAERI 268
+E++
Sbjct: 381 SSEAFSEQL 389
>UNIPROTKB|Q8ECG6 [details] [associations]
symbol:SO_3176 "O-antigen biosynthesis glycosyl transferase
family 4" species:211586 "Shewanella oneidensis MR-1" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009103 HOGENOM:HOG000077290
RefSeq:NP_718732.1 ProteinModelPortal:Q8ECG6 GeneID:1170870
KEGG:son:SO_3176 PATRIC:23526036 OMA:WMYHADF Uniprot:Q8ECG6
Length = 373
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 40/189 (21%), Positives = 79/189 (41%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGS 130
R RESL + +F ++ + KGQD+ L +F + + + +++G
Sbjct: 181 RNSFRESLSLDKHVTVFGLVGRFHKDKGQDILLEAFSK-------LKADISNYKILLVGR 233
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 190
+ N +L N + + + V + + ++ L+A+D+ V S+ G F
Sbjct: 234 ECNNDNH---QLVNLINSYGLDENVILLGEQNDISGLLSAMDIYVMGSRTEG--FPNALA 288
Query: 191 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250
EAM+ LP + T G ++ +L + +VK+ VE+R +G
Sbjct: 289 EAMSIGLPCIATNVGDAA--LLADKYAVLSEANSNSLADAILAVVKMP--VEQRKMLGIH 344
Query: 251 GYERVKEIF 259
+ V++ F
Sbjct: 345 AADHVRKSF 353
>TIGR_CMR|SO_3176 [details] [associations]
symbol:SO_3176 "glycosyl transferase, group 1 family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009103 HOGENOM:HOG000077290
RefSeq:NP_718732.1 ProteinModelPortal:Q8ECG6 GeneID:1170870
KEGG:son:SO_3176 PATRIC:23526036 OMA:WMYHADF Uniprot:Q8ECG6
Length = 373
Score = 112 (44.5 bits), Expect = 0.00073, P = 0.00073
Identities = 40/189 (21%), Positives = 79/189 (41%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGS 130
R RESL + +F ++ + KGQD+ L +F + + + +++G
Sbjct: 181 RNSFRESLSLDKHVTVFGLVGRFHKDKGQDILLEAFSK-------LKADISNYKILLVGR 233
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 190
+ N +L N + + + V + + ++ L+A+D+ V S+ G F
Sbjct: 234 ECNNDNH---QLVNLINSYGLDENVILLGEQNDISGLLSAMDIYVMGSRTEG--FPNALA 288
Query: 191 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250
EAM+ LP + T G ++ +L + +VK+ VE+R +G
Sbjct: 289 EAMSIGLPCIATNVGDAA--LLADKYAVLSEANSNSLADAILAVVKMP--VEQRKMLGIH 344
Query: 251 GYERVKEIF 259
+ V++ F
Sbjct: 345 AADHVRKSF 353
>UNIPROTKB|Q0C680 [details] [associations]
symbol:HNE_0029 "Glycosyl transferase, group 1 family
protein" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001296 Pfam:PF00534 GO:GO:0016757 eggNOG:COG0438
CAZy:GT4 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
KO:K00754 RefSeq:YP_758763.1 ProteinModelPortal:Q0C680
STRING:Q0C680 GeneID:4289433 KEGG:hne:HNE_0029 PATRIC:32212842
HOGENOM:HOG000129878 OMA:AWAPRAS BioCyc:HNEP228405:GI69-76-MONOMER
Uniprot:Q0C680
Length = 349
Score = 111 (44.1 bits), Expect = 0.00084, P = 0.00084
Identities = 46/156 (29%), Positives = 70/156 (44%)
Query: 120 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 179
VP ++ I G + E++L+ + + + DRV F+ L A DV+ S+
Sbjct: 194 VPGLYVWIAG-----EGPLEADLKAHCARLGLGDRVRFLGWRNDRGALLEACDVVAFPSR 248
Query: 180 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239
E FG +T++A A P++ A G V +G GLL P K + LA + ++ T
Sbjct: 249 Y--EPFGTVTVDAWAASRPLVAADAAGPAAYVKDGVNGLLIP--KNDVDALANALTRVIT 304
Query: 240 H--VERRLTMGKRG-YERV--KEIFQEHHMA--ERI 268
+ R+ G R YE K FQ A ERI
Sbjct: 305 DKALAARIVEGGRASYEAQFNKAAFQRDSAALYERI 340
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 262 0.00091 114 3 11 22 0.43 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 606 (64 KB)
Total size of DFA: 182 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.01u 0.17s 21.18t Elapsed: 00:00:01
Total cpu time: 21.01u 0.17s 21.18t Elapsed: 00:00:01
Start: Mon May 20 20:53:06 2013 End: Mon May 20 20:53:07 2013