Your job contains 1 sequence.
>023291
MESGRLFFDRSSCPGNMLFLGNGDSFFGGARSMMSMEETSKRRPFFSSPDDLFDDCYYDE
QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK
QLERDYDLLKSSYDALLSSYDSLVKENQKLKSEVVSLNEKIEAKEEESKEAKSDKKTETH
HQPTEVTNNICGIQLQLSNNKTEDRLSSGCSGESAVVDEDGPQRVVDTGDSYFGCMDPVV
DAAQSEEDGGSDDGRSYFSDVLVVAPDHVSNQQHEEPLGWWVWS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023291
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 581 2.0e-56 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 284 1.4e-27 2
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 275 5.3e-24 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 274 6.8e-24 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 261 1.6e-22 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 258 3.4e-22 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 256 5.5e-22 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 215 1.4e-20 2
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 217 2.8e-20 2
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 236 7.2e-20 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 225 1.1e-18 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 210 4.1e-17 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 209 5.3e-17 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 203 2.3e-16 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 199 6.0e-16 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 183 3.0e-14 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 174 3.1e-13 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 168 6.4e-12 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 166 1.9e-11 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 155 2.8e-11 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 165 3.1e-11 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 161 1.6e-10 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 161 2.9e-10 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 159 3.4e-10 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 158 6.8e-10 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 141 1.0e-09 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 154 2.7e-09 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 133 9.1e-09 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 130 2.0e-08 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 123 1.3e-07 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 121 2.2e-07 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 129 2.4e-07 2
UNIPROTKB|I3LRX4 - symbol:I3LRX4 "Uncharacterized protein... 119 3.8e-07 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 119 3.8e-07 1
UNIPROTKB|F1NPY3 - symbol:F1NPY3 "Uncharacterized protein... 131 4.1e-07 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 129 6.0e-07 2
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 117 6.5e-07 1
UNIPROTKB|Q7YRX0 - symbol:RAX2 "Retina and anterior neura... 126 7.8e-07 1
UNIPROTKB|E2R5X4 - symbol:RAX2 "Uncharacterized protein" ... 126 7.8e-07 1
UNIPROTKB|Q96IS3 - symbol:RAX2 "Retina and anterior neura... 126 7.8e-07 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 129 7.9e-07 2
UNIPROTKB|F1NYF2 - symbol:NKX6-2 "Uncharacterized protein... 116 8.4e-07 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 115 1.1e-06 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 115 1.1e-06 1
ZFIN|ZDB-GENE-980526-299 - symbol:hhex "hematopoietically... 129 1.4e-06 1
UNIPROTKB|F1NXB2 - symbol:HHEX "Hematopoietically-express... 131 1.6e-06 1
UNIPROTKB|Q05502 - symbol:HHEX "Hematopoietically-express... 131 1.6e-06 1
UNIPROTKB|F1NES3 - symbol:HHEX "Hematopoietically-express... 131 1.7e-06 1
UNIPROTKB|F1MZR4 - symbol:LOC516179 "Uncharacterized prot... 113 1.8e-06 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 113 1.8e-06 1
UNIPROTKB|F1S7P4 - symbol:RAX2 "Uncharacterized protein" ... 123 2.3e-06 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 112 2.4e-06 1
UNIPROTKB|F1NNC8 - symbol:TLX1 "T-cell leukemia homeobox ... 112 2.4e-06 1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein... 112 2.4e-06 1
UNIPROTKB|F1NM26 - symbol:MEOX2 "Uncharacterized protein"... 130 2.5e-06 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 129 2.6e-06 1
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ... 129 2.6e-06 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 129 2.6e-06 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 129 2.6e-06 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 129 2.7e-06 1
UNIPROTKB|G3V567 - symbol:PAX6 "Paired box protein Pax-6"... 111 3.1e-06 1
UNIPROTKB|F6VMK5 - symbol:NKX3-1 "Uncharacterized protein... 111 3.1e-06 1
WB|WBGene00045215 - symbol:ceh-63 species:6239 "Caenorhab... 111 3.1e-06 1
UNIPROTKB|G3V243 - symbol:RAX2 "Retina and anterior neura... 126 3.5e-06 1
ZFIN|ZDB-GENE-030328-42 - symbol:pnx "posterior neuron-sp... 121 3.8e-06 1
UNIPROTKB|F1PRX2 - symbol:NKX3-1 "Uncharacterized protein... 110 4.0e-06 1
UNIPROTKB|D2H028 - symbol:PANDA_002743 "Putative uncharac... 110 4.0e-06 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 109 5.2e-06 1
TAIR|locus:2012933 - symbol:AT1G20280 "AT1G20280" species... 109 5.2e-06 1
UNIPROTKB|F6Q274 - symbol:F6Q274 "Uncharacterized protein... 126 6.5e-06 1
UNIPROTKB|Q9PVX0 - symbol:RX2 "Retinal homeobox protein R... 127 6.5e-06 1
UNIPROTKB|F1NVB2 - symbol:TLX3 "T-cell leukemia homeobox ... 108 6.8e-06 1
UNIPROTKB|F1NH36 - symbol:Gga.55791 "Uncharacterized prot... 125 7.2e-06 1
UNIPROTKB|Q9PVY0 - symbol:RX1 "Retinal homeobox protein R... 123 8.1e-06 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 107 8.7e-06 1
WB|WBGene00000432 - symbol:ceh-7 species:6239 "Caenorhabd... 107 8.7e-06 1
WB|WBGene00000584 - symbol:cog-1 species:6239 "Caenorhabd... 124 8.8e-06 1
FB|FBgn0038852 - symbol:CG7056 species:7227 "Drosophila m... 126 9.1e-06 1
UNIPROTKB|Q0P4H6 - symbol:lbx1 "Transcription factor LBX1... 124 9.7e-06 1
UNIPROTKB|Q2PYN8 - symbol:lbx1 "Transcription factor LBX1... 124 9.9e-06 1
UNIPROTKB|H2L2F8 - symbol:ceh-27 "Protein CEH-27, isoform... 116 1.0e-05 1
UNIPROTKB|E1C639 - symbol:Gga.30007 "Uncharacterized prot... 113 1.1e-05 1
UNIPROTKB|J9NYL4 - symbol:LBX1 "Uncharacterized protein" ... 124 1.1e-05 1
UNIPROTKB|P52954 - symbol:LBX1 "Transcription factor LBX1... 124 1.1e-05 1
UNIPROTKB|D7R811 - symbol:LBX1 "Uncharacterized protein" ... 124 1.1e-05 1
UNIPROTKB|Q02814 - symbol:CHOX-CAD2 "Homeobox protein CHO... 106 1.1e-05 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 106 1.1e-05 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 106 1.1e-05 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 106 1.1e-05 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 106 1.1e-05 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 106 1.1e-05 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 106 1.1e-05 1
UNIPROTKB|E1BC20 - symbol:LBX1 "Uncharacterized protein" ... 124 1.1e-05 1
MGI|MGI:104867 - symbol:Lbx1 "ladybird homeobox homolog 1... 124 1.1e-05 1
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 133 1.2e-05 2
RGD|1564197 - symbol:Lbx1 "ladybird homeobox 1" species:1... 124 1.2e-05 1
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 125 1.2e-05 1
UNIPROTKB|F1NF97 - symbol:GBX2 "Homeobox protein GBX-2" s... 117 1.4e-05 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 105 1.5e-05 1
RGD|1564874 - symbol:Nkx1-1 "NK1 transcription factor rel... 105 1.5e-05 1
WARNING: Descriptions of 360 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 142/290 (48%), Positives = 169/290 (58%)
Query: 1 MESGRLFFDRSSCPGN-MLFLGNGDSFF--GGARSMMSMEETSKRRXXXXXXXXXXXXCY 57
MES FFD S+ GN M FLGN + GGARSMM+MEETSKRR +
Sbjct: 1 MESNSFFFDPSASHGNSMFFLGNLNPVVQGGGARSMMNMEETSKRRPFFSSPEDLYDDDF 60
Query: 58 YDEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
YD+QLPEKKRRLT EQVHLLEKSFE ENKLEPERK QLAKKLGLQPRQVAVWFQNRRARW
Sbjct: 61 YDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARW 120
Query: 118 KTKQLERXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSLNXXXXXXXXXXXXXXXXXXX 177
KTKQLER V +N KL+SEV SL
Sbjct: 121 KTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETA--------- 171
Query: 178 XXHHQPTEVT--NNICGIQLQLSNNKTEDRLSSGCSGESAVVDEDGPQRVVDTGDSYFGC 235
+ P +V N + + + + KTEDRLSSG G SAV+D+D PQ ++D+ DSYF
Sbjct: 172 --NEPPGQVPEPNQLDPVYINAAAIKTEDRLSSGSVG-SAVLDDDAPQ-LLDSCDSYFPS 227
Query: 236 MDPVVDAAQSEEDGGSDDGRSYFSDVLV--VAPDHVSNQQHEEPLGWWVW 283
+ P+ D + + + D+ RS F+DV V +P H H E L +W W
Sbjct: 228 IVPIQDNSNASDH---DNDRSCFADVFVPTTSPSH---DHHGESLAFWGW 271
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 284 (105.0 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 65/146 (44%), Positives = 83/146 (56%)
Query: 12 SCPGNMLFLGNGDSFFGGARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRRLTA 71
SCP + LF G G+ + S+M+++E + L EKK+RL
Sbjct: 39 SCPPH-LFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHT----MLGEKKKRLQL 93
Query: 72 EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLERXXXXXXX 131
EQV LEKSFE NKLEPERK QLAK LG+QPRQ+A+WFQNRRARWKT+QLER
Sbjct: 94 EQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLERDYDSLKK 153
Query: 132 XXXXXXXXXXXXVKENQKLKSEVVSL 157
+ N+KL +EV++L
Sbjct: 154 QFESLKSDNASLLAYNKKLLAEVMAL 179
Score = 40 (19.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 5/8 (62%), Positives = 6/8 (75%)
Query: 277 PLGWWVWS 284
P G+W WS
Sbjct: 267 PAGYWAWS 274
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 57/96 (59%), Positives = 65/96 (67%)
Query: 62 LPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
L EKK+RL EQV LEKSFE NKLEPERK QLAK LGLQPRQ+A+WFQNRRARWKTKQ
Sbjct: 112 LGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQ 171
Query: 122 LERXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
LER + N+KL +E+V+L
Sbjct: 172 LERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVAL 207
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 57/103 (55%), Positives = 68/103 (66%)
Query: 57 YYDE--QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
Y D+ Q+ EKKRRL EQV LEK+FE NKLEPERK QLA+ LGLQPRQ+A+WFQNRR
Sbjct: 75 YSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRR 134
Query: 115 ARWKTKQLERXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
ARWKTKQLE+ NQKL++E++ L
Sbjct: 135 ARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGL 177
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 54/96 (56%), Positives = 64/96 (66%)
Query: 62 LPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
L EKKRRL+ QV LEK+FE ENKLEPERK +LA++LGLQPRQVAVWFQNRRARWKTKQ
Sbjct: 59 LSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQ 118
Query: 122 LERXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
LE+ ++N+ L E+ L
Sbjct: 119 LEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKL 154
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 50/63 (79%), Positives = 56/63 (88%)
Query: 62 LPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
L EKKRRL +QV LEK+FE ENKLEPERK +LA++LGLQPRQVAVWFQNRRARWKTKQ
Sbjct: 56 LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 115
Query: 122 LER 124
LE+
Sbjct: 116 LEK 118
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 52/94 (55%), Positives = 62/94 (65%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
EKKRRL EQV LEK+FE +NKLEPERK +LA++LGLQPRQVA+WFQNRRARWKTKQLE
Sbjct: 71 EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLE 130
Query: 124 RXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
R ++N L ++ L
Sbjct: 131 RDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKEL 164
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 215 (80.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 42/59 (71%), Positives = 50/59 (84%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
+KR+LT EQV++LE SF E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE
Sbjct: 55 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLE 113
Score = 42 (19.8 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 196 QLSNNKTEDRLSSGCSGESAVVDEDGPQRVVDTGDSYFGCMDPVVDAAQSEE 247
++ + +SS S E+ G +V D GD Y PV + + +E
Sbjct: 157 RVEGGSSNSPISSSVSVEANETPFFGDYKVGDDGDDYDHLFYPVPENSYIDE 208
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 217 (81.4 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 45/92 (48%), Positives = 57/92 (61%)
Query: 66 KRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLERX 125
+RR + EQ+ LE FE+E +LEP +K QLA++LGLQPRQVA+WFQN+RARWK+KQLE
Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92
Query: 126 XXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
KE Q L SE+ L
Sbjct: 93 YNILRQNYDNLASQFESLKKEKQALVSELQRL 124
Score = 37 (18.1 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 196 QLSNNKTEDRLSSGCSGESAVV 217
+ + KT++ CSG+ AVV
Sbjct: 126 EATQKKTQEE-ERQCSGDQAVV 146
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 51/103 (49%), Positives = 67/103 (65%)
Query: 57 YYDE--QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
Y D+ ++ EKKRRL EQ+ LEK FE NKLE +RK +LA+ LGLQPRQ+A+WFQNRR
Sbjct: 61 YSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRR 120
Query: 115 ARWKTKQLERXXXXXXXXXXXXXXXXXXXVKENQKLKSEVVSL 157
AR KTKQLE+ +NQKL+++V++L
Sbjct: 121 ARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMAL 163
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 45/93 (48%), Positives = 59/93 (63%)
Query: 66 KRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLERX 125
++R + EQ+ LE FE+E +LEP +K Q+A++LGLQPRQVA+WFQN+RARWKTKQLE+
Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKE 90
Query: 126 XXXXXXXXXXXXXXXXXXVKENQKLKSEVVSLN 158
KE Q L SE+ LN
Sbjct: 91 YNTLRANYNNLASQFEIMKKEKQSLVSELQRLN 123
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 40/59 (67%), Positives = 50/59 (84%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
+KR+L+ EQV +LE SFE ++KLE ERK +LA +LGL PRQVAVWFQNRRARWK K++E
Sbjct: 61 RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVE 119
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 39/60 (65%), Positives = 52/60 (86%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
KK+RLT+ Q+ LE+SF+ E KL+ +RK +L+++LGLQPRQ+AVWFQNRRARWK KQLE+
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 40/59 (67%), Positives = 49/59 (83%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
+KR+LT EQV++LE SF E+KLE RK ++A +LGL PRQVAVWFQNRRARWK K+LE
Sbjct: 71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLE 129
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 40/68 (58%), Positives = 54/68 (79%)
Query: 64 EKKRRLTAEQVHLLEKSFEAE---N-----KLEPERKGQLAKKLGLQPRQVAVWFQNRRA 115
+KK+++T+EQ+ LE+SF+ E N KL P+RK +L+K+LGLQPRQ+AVWFQNR+A
Sbjct: 70 KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKA 129
Query: 116 RWKTKQLE 123
RWK KQLE
Sbjct: 130 RWKNKQLE 137
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK+RLT +QV LEK F KLEP+ K QL+ +LGL RQVAVWFQN+RAR+KT+ LE
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLE 69
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 174 (66.3 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 37/61 (60%), Positives = 42/61 (68%)
Query: 63 PEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQL 122
P KK RLT EQ LLE SF + L P++K LAK L L+PRQ+ VWFQNRRAR K KQ
Sbjct: 137 PRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQT 196
Query: 123 E 123
E
Sbjct: 197 E 197
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 168 (64.2 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 35/59 (59%), Positives = 44/59 (74%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RLT +Q LLE+SF+ + L P++K LA++L L+PRQV VWFQNRRAR K KQ E
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTE 171
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 166 (63.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 58 YDEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
Y + KK RL+ +Q +LE +F+ N L P++K LAKKLGL RQV VWFQNRRAR
Sbjct: 128 YGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRART 187
Query: 118 KTKQLE 123
K KQ E
Sbjct: 188 KLKQTE 193
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 35/59 (59%), Positives = 39/59 (66%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RLT EQ HLLE+SF + L P++K LA L L RQV VWFQNRRAR K K E
Sbjct: 69 KKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTE 127
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 165 (63.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 34/59 (57%), Positives = 43/59 (72%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RLT +Q LLE +F+ + L P++K LA++L L+PRQV VWFQNRRAR K KQ E
Sbjct: 126 KKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE 184
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 161 (61.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RL+ +Q +LE++F+ + L P++K LAK+LGL+ RQV VWFQNRRAR K KQ E
Sbjct: 129 KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTE 187
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 161 (61.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RL+ +Q LE SF+ + L P++K LAK+L L+PRQV VWFQNRRAR K KQ E
Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTE 248
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 159 (61.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RL+ +Q LE++F+ N L P++K LAKKL L RQV VWFQNRRAR K KQ E
Sbjct: 130 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTE 188
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 158 (60.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RL+ EQ +LE++F+ + L P++K LAK+L L+ RQV VWFQNRRAR K KQ E
Sbjct: 162 KKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTE 220
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 141 (54.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 58 YDEQLPEKKR----RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
Y + P+K++ R T EQ LE F++ L P+ + +LAK L L RQV WFQNR
Sbjct: 68 YMSKSPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNR 127
Query: 114 RARWK 118
RA+W+
Sbjct: 128 RAKWR 132
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 154 (59.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 65 KKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KK RL+ +Q +LE++F+ + L P++K LAK+L L+ RQV VWFQNRRAR K KQ E
Sbjct: 163 KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTE 221
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 133 (51.9 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 60 EQLPEKKRRLT--AEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
++ KK R T +QV LEK FEA+ L + +LAK+L + QV +WFQNRR +W
Sbjct: 66 QKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKW 125
Query: 118 KTKQLER 124
K + E+
Sbjct: 126 KKIESEK 132
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 130 (50.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 34/92 (36%), Positives = 43/92 (46%)
Query: 31 RSMMSMEETSKRRXXXXXXXXXXXXCYYDEQL---PEKKRR-LTAEQVHLLEKSFEAENK 86
R +S ET KR Y ++ P K+R T EQ+ LE F N
Sbjct: 2 RQALSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNY 61
Query: 87 LEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 62 LTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 93
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 21/59 (35%), Positives = 43/59 (72%)
Query: 61 QLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
Q+ +K R L ++Q+ LEK F+ ++ + +++ ++A+ +G+ P+++ VWFQNRRA+W+
Sbjct: 59 QIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR 117
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 121 (47.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 21 GNGDSFFG--GARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRRLTAEQVHLLE 78
G GD + G G+ + + +++S+RR + +++ T EQ+ LE
Sbjct: 14 GPGDDY-GVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELE 72
Query: 79 KSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 73 AEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 112
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 129 (50.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 199
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 185 EVTNNICGIQLQLSNNKTEDRL-SSGCSGESAV-------VDEDGPQRVVDTGDS-YF 233
E +N C + LS+ + + L SS CS A + ED Q V GD YF
Sbjct: 210 ESLDNPCDQRQDLSSEQNKGALDSSQCSPSPASQEDLESEISEDSDQEVDIEGDKGYF 267
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 119 (46.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 64 EKKRR---LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
E++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 1 ERRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 119 (46.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 59 DEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
D + P++ R + T EQ+ LE+SF L + +LA+ LGL QV VWFQNRR +
Sbjct: 31 DLERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQ 90
Query: 118 K 118
K
Sbjct: 91 K 91
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 131 (51.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 62 LPEKKRRLT---AEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW- 117
LP KK+ T AEQ+ LEK F+ + + E++ ++A +G+ P+++ VWFQNRRA+W
Sbjct: 6 LPVKKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWR 65
Query: 118 KTKQ 121
KT++
Sbjct: 66 KTEK 69
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 129 (50.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 198
Score = 38 (18.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 185 EVTNNICGIQLQLSNNKTEDRL-SSGCSGESAVVDEDGPQRVVDTGD 230
E +N C + L + + + L SS CS S V ED + + D
Sbjct: 209 ESLDNSCDQRQDLPSEQNKGALDSSQCS-PSPVSQEDLESEISEDSD 254
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 117 (46.2 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 25 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 80
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 60 EQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
E+ P+KK R T Q+H LE++FEA + + + +LA K+ L +V VWFQNRR
Sbjct: 20 EEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRR 79
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 80 AKWRRQE 86
>UNIPROTKB|E2R5X4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
CTD:84839 KO:K09333 OMA:SFGPHAF EMBL:AAEX03012573
RefSeq:XP_854816.1 Ensembl:ENSCAFT00000030462 GeneID:612000
KEGG:cfa:612000 NextBio:20897534 Uniprot:E2R5X4
Length = 184
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 60 EQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
E+ P+KK R T Q+H LE++FEA + + + +LA K+ L +V VWFQNRR
Sbjct: 20 EETPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRR 79
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 80 AKWRRQE 86
>UNIPROTKB|Q96IS3 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Orphanet:1872 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
EMBL:AC005777 HOVERGEN:HBG021349 CTD:84839 eggNOG:NOG248147
KO:K09333 OrthoDB:EOG4V4387 EMBL:AY211277 EMBL:BC007284
EMBL:BC018709 EMBL:BC032512 IPI:IPI00063781 RefSeq:NP_116142.1
UniGene:Hs.532691 ProteinModelPortal:Q96IS3 SMR:Q96IS3
STRING:Q96IS3 DMDM:74760880 PRIDE:Q96IS3 Ensembl:ENST00000395106
GeneID:84839 KEGG:hsa:84839 UCSC:uc002lyr.3 GeneCards:GC19M003769
HGNC:HGNC:18286 MIM:610362 MIM:610381 MIM:613757 neXtProt:NX_Q96IS3
PharmGKB:PA162400734 InParanoid:Q96IS3 PhylomeDB:Q96IS3
GenomeRNAi:84839 NextBio:75065 ArrayExpress:Q96IS3 Bgee:Q96IS3
CleanEx:HS_RAX2 Genevestigator:Q96IS3 Uniprot:Q96IS3
Length = 184
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 60 EQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
E+ P+KK R T Q+H LE++FEA + + + +LA K+ L +V VWFQNRR
Sbjct: 20 EEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRR 79
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 80 AKWRRQE 86
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 129 (50.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 200
Score = 37 (18.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 185 EVTNNICGIQLQLSNNKTEDRL-SSGCSGESAVVDEDGPQRVVDTGD 230
E +N C + L +++ L SS CS S V ED + + D
Sbjct: 211 ESLDNSCDQRQDLPSDQNTGALESSQCS-PSPVSQEDLESEISEDSD 256
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 116 (45.9 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 20 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 79
Query: 119 TK 120
+
Sbjct: 80 KR 81
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 115 (45.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 10 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 115 (45.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQV +WFQNRR +
Sbjct: 30 YNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMK 89
Query: 117 WK 118
WK
Sbjct: 90 WK 91
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 129 (50.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 178
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 131 (51.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + EQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 205
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 131 (51.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + EQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 205
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + EQ LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 159 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 214
>UNIPROTKB|F1MZR4 [details] [associations]
symbol:LOC516179 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0045687 "positive regulation of glial cell differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0010455
"positive regulation of cell fate commitment" evidence=IEA]
[GO:0010454 "negative regulation of cell fate commitment"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
OMA:WDDEKIT Uniprot:F1MZR4
Length = 151
Score = 113 (44.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 21 DGKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 80
Query: 119 TK 120
+
Sbjct: 81 KR 82
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 113 (44.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 59 DEQLPEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
D + P+K+ R +Q+ LE F ++ L +++ QLA +L L QV +WFQNRR +
Sbjct: 24 DTERPQKRVRTIFNLKQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVK 83
Query: 117 WKTKQ 121
++ +Q
Sbjct: 84 YQKQQ 88
>UNIPROTKB|F1S7P4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:SFGPHAF EMBL:FP102497 Ensembl:ENSSSCT00000014739 Uniprot:F1S7P4
Length = 184
Score = 123 (48.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 60 EQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
++ P+KK R T Q+H LE++FEA + + + +LA K+ L +V VWFQNRR
Sbjct: 20 DEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRR 79
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 80 AKWRRQE 86
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 112 (44.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
EK R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 112 (44.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 58 YDEQLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
Y + P KK++ T Q+ LEK F + L + LAK L + QV WFQNR
Sbjct: 4 YQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNR 63
Query: 114 RARWKTKQLE 123
R +W+ + E
Sbjct: 64 RTKWRRQTAE 73
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 112 (44.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 77 LEKSFEAENKL-EPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
LEK FE + + +P+RK QLA LGL QV VWFQNRR +W+
Sbjct: 24 LEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWR 65
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 130 (50.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/92 (36%), Positives = 43/92 (46%)
Query: 31 RSMMSMEETSKRRXXXXXXXXXXXXCYYDEQL---PEKKRR-LTAEQVHLLEKSFEAENK 86
R +S ET KR Y ++ P K+R T EQ+ LE F N
Sbjct: 150 RQALSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNY 209
Query: 87 LEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 210 LTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 241
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 129 (50.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 198
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 129 (50.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 199
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 129 (50.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 199
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 129 (50.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 198
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 129 (50.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
R + +Q LEK FE + L P + +LAK L L RQV WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 200
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 111 (44.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 8 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 67
Query: 121 Q 121
+
Sbjct: 68 E 68
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 111 (44.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 63 PEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
P+K+ R + QV LE+ F + L + LAK L L QV +WFQNRR + K K
Sbjct: 31 PQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 90
Query: 121 QL 122
QL
Sbjct: 91 QL 92
>WB|WBGene00045215 [details] [associations]
symbol:ceh-63 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 EMBL:FO080254 RefSeq:NP_001123094.1
UniGene:Cel.37684 ProteinModelPortal:A3FPJ2 SMR:A3FPJ2
EnsemblMetazoa:C02F12.10 GeneID:6418830 KEGG:cel:CELE_C02F12.10
UCSC:C02F12.10 CTD:6418830 WormBase:C02F12.10 eggNOG:NOG310362
HOGENOM:HOG000246442 InParanoid:A3FPJ2 OMA:ELTECQV NextBio:20901882
Uniprot:A3FPJ2
Length = 152
Score = 111 (44.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 63 PEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
P K+ T+EQV LLE F + +R+G+LA+ + L QV WFQNRR +
Sbjct: 42 PTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVKTWFQNRRTK 95
>UNIPROTKB|G3V243 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox like
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH471139 EMBL:AC005777
OMA:SFGPHAF UniGene:Hs.532691 HGNC:HGNC:18286
ProteinModelPortal:G3V243 SMR:G3V243 Ensembl:ENST00000555633
ArrayExpress:G3V243 Bgee:G3V243 Uniprot:G3V243
Length = 230
Score = 126 (49.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 60 EQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
E+ P+KK R T Q+H LE++FEA + + + +LA K+ L +V VWFQNRR
Sbjct: 66 EEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRR 125
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 126 AKWRRQE 132
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 121 (47.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
T +Q+ +LE+SF++ + L + +A LGL QV +WFQNRR +WK K+L+
Sbjct: 75 TLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWK-KELD 127
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 110 (43.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 63 PEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
P+K+ R + QV LE+ F + L + LAK L L QV +WFQNRR + K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 121 QL 122
QL
Sbjct: 89 QL 90
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 110 (43.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Query: 63 PEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
P+K+ R + QV LE+ F + L + LAK L L QV +WFQNRR + K K
Sbjct: 29 PQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRK 88
Query: 121 QL 122
QL
Sbjct: 89 QL 90
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 109 (43.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 64 EKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+K+ R TAEQ+ L+ F+A + +R+ LA++L L Q+ +WFQN+RA+ K
Sbjct: 3 DKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>TAIR|locus:2012933 [details] [associations]
symbol:AT1G20280 "AT1G20280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GO:GO:0003677 IPI:IPI00531800
RefSeq:NP_173453.1 EnsemblPlants:AT1G20280.1 GeneID:838616
KEGG:ath:AT1G20280 PhylomeDB:F4HSR5 Uniprot:F4HSR5
Length = 71
Score = 109 (43.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 29/65 (44%), Positives = 34/65 (52%)
Query: 1 MESGRLFFDRSSCPGN-MLFLGNGDSFF--GGARSMMSMEETSKRRXXXXXXXXXXXXCY 57
MES FF+ S+ GN M F N + GG RSMM+ EETSKRR Y
Sbjct: 1 MESNSFFFNPSASHGNIMFFFRNLNPVVQGGGTRSMMNKEETSKRRPFFSSLEDLYDDDY 60
Query: 58 YDEQL 62
YD+QL
Sbjct: 61 YDDQL 65
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 126 (49.4 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 61 QLPEKKRR---LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL 179
Query: 118 KTKQLE 123
K + LE
Sbjct: 180 K-RDLE 184
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 127 (49.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
DE+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 114 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 173
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 174 RAKWRRQE 181
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 108 (43.1 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 58 YDEQLPEKKR--RLTAEQVHL--LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
Y + P K++ R + +V + LEK F + L + LAK L + QV WFQNR
Sbjct: 3 YQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNR 62
Query: 114 RARWKTKQLE 123
R +W+ + E
Sbjct: 63 RTKWRRQTAE 72
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 125 (49.1 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 23 GDSFFGGARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRR-----LTAEQVHLL 77
GD F GG + ++ E +E+ P+KK R T Q+H L
Sbjct: 27 GDGF-GGTKMFLNKCEGDLGELRKPGDSEGTPPAAAEEEQPKKKHRRNRTTFTTYQLHEL 85
Query: 78 EKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
E++FE + + + +LA K+ L +V VWFQNRRA+W+ ++
Sbjct: 86 ERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQE 129
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 123 (48.4 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 28 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 87
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 88 RAKWRRQE 95
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 107 (42.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 63 PEKKRRLTAE---QVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P+ KR TA Q LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 5 PDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 107 (42.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++P ++ T EQ++LLE F + + + +LA+ L L QV +WFQNRR R +
Sbjct: 22 RIPRRRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIRMR 79
>WB|WBGene00000584 [details] [associations]
symbol:cog-1 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0007389 "pattern
specification process" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0018991
GO:GO:0008406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007368
GeneTree:ENSGT00680000099625 HSSP:P13297 EMBL:Z82279 EMBL:AY151209
PIR:T23866 RefSeq:NP_001022264.1 UniGene:Cel.20704
ProteinModelPortal:G5EGE2 SMR:G5EGE2 IntAct:G5EGE2
EnsemblMetazoa:R03C1.3a GeneID:175149 KEGG:cel:CELE_R03C1.3
CTD:175149 WormBase:R03C1.3a OMA:ASGDKSP NextBio:886968
Uniprot:G5EGE2
Length = 256
Score = 124 (48.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
Q + + T Q++ LE+ FE L + QLA++L + QV VWFQNRR +W+ K
Sbjct: 168 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKK 227
Query: 121 Q 121
+
Sbjct: 228 E 228
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
R T++Q LE F + L PE + LA +L L RQV WFQNRRA+W+ L +
Sbjct: 200 RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK 256
>UNIPROTKB|Q0P4H6 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
Length = 265
Score = 124 (48.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 124 (48.7 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 122 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 181
Query: 117 WKTKQLE 123
K + LE
Sbjct: 182 LK-RDLE 187
>UNIPROTKB|H2L2F8 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243
GeneTree:ENSGT00700000104098 EMBL:Z81085 RefSeq:NP_001256349.1
ProteinModelPortal:H2L2F8 SMR:H2L2F8 EnsemblMetazoa:F46F3.1b
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 WormBase:F46F3.1b
Uniprot:H2L2F8
Length = 170
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 62 LPEKKRRL--TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
+ +KRR+ + +QVH+LE+ F+ L + LAK + L QV +WFQN+R + K
Sbjct: 3 ISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKR 62
Query: 120 KQLER 124
++ E+
Sbjct: 63 QEKEK 67
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 66 KRRL----TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
KRR+ TAEQ+ LEK F+ + + + QLA K+ L +V +WFQN+RA+W+
Sbjct: 82 KRRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAKWR 138
>UNIPROTKB|J9NYL4 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG EMBL:AAEX03015474
RefSeq:XP_543979.1 Ensembl:ENSCAFT00000047871 GeneID:486850
KEGG:cfa:486850 Uniprot:J9NYL4
Length = 281
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>UNIPROTKB|P52954 [details] [associations]
symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0021920
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord association neuron specification"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048664 "neuron fate
determination" evidence=IEA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
Uniprot:P52954
Length = 281
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>UNIPROTKB|D7R811 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG OrthoDB:EOG4TTGJP EMBL:CU469143
EMBL:HM044216 RefSeq:NP_001193265.1 UniGene:Ssc.101871
Ensembl:ENSSSCT00000031910 GeneID:100155030 KEGG:ssc:100155030
Uniprot:D7R811
Length = 281
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
EK R + + L LEK F + RK +LA LGL RQV WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAK 55
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 8 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 61
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 23 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 76
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 6 DKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAK 59
>UNIPROTKB|E1BC20 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048664 "neuron fate determination" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001947
GO:GO:0000976 GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
KO:K09353 OMA:NSEATAG GO:GO:0021920 EMBL:DAAA02058980
IPI:IPI00685675 RefSeq:NP_001179743.1 UniGene:Bt.54498
Ensembl:ENSBTAT00000032902 GeneID:534470 KEGG:bta:534470
NextBio:20876409 Uniprot:E1BC20
Length = 282
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>MGI|MGI:104867 [details] [associations]
symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048664 "neuron fate determination"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
Uniprot:P52955
Length = 282
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/106 (34%), Positives = 52/106 (49%)
Query: 21 GNGDSFFGGARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKR--RLTAEQVHLLE 78
G GD+F G EE R ++ P KKR R T +Q+ LE
Sbjct: 91 GGGDTFDGSVNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELE 150
Query: 79 KSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
F+ + +++ +L+K+L L+ RQV WFQNRR + KT QLER
Sbjct: 151 SMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLER 195
Score = 36 (17.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 236 MDPVVDAAQSEE 247
MD +V AQSEE
Sbjct: 330 MDELVKLAQSEE 341
>RGD|1564197 [details] [associations]
symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048664 "neuron fate
determination" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
Length = 285
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 61 QLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Q P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+
Sbjct: 120 QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK 179
Query: 117 WKTKQLE 123
K + LE
Sbjct: 180 LK-RDLE 185
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
DE P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 127 DEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 186
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 187 RAKWRRQE 194
>UNIPROTKB|F1NF97 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021930 "cerebellar granule cell precursor
proliferation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0048483 "autonomic nervous system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 IPI:IPI00603632
EMBL:AADN02057578 Ensembl:ENSGALT00000021775 OMA:PREEDCG
Uniprot:F1NF97
Length = 180
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 80 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 135
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 7 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60
>RGD|1564874 [details] [associations]
symbol:Nkx1-1 "NK1 transcription factor related, locus 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043467 "regulation of generation of precursor
metabolites and energy" evidence=IEA;ISO] [GO:0050877 "neurological
system process" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564874 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0050877 GeneTree:ENSGT00660000095141
GO:GO:0043467 IPI:IPI00766731 ProteinModelPortal:F1M5E3 SMR:F1M5E3
Ensembl:ENSRNOT00000057911 Uniprot:F1M5E3
Length = 60
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
P + R T EQ+ LE F+A L + LA L L QV +WFQNRR +WK KQ
Sbjct: 1 PRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 59
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 60 EQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
E+ P+ K ++ + LE+ F + L + K ++AKK G+ P QV VWF N+R R K
Sbjct: 68 EKSPKGKSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 126
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/60 (43%), Positives = 31/60 (51%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
P + R T EQ+ LE F A L + LA L L QV +WFQNRR +WK KQ
Sbjct: 15 PRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-KQ 73
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
LEK F+ L +R +++ LGL RQ+ +WFQNRR +WK ++
Sbjct: 22 LEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 121 (47.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 21 GNGDSFFG--GARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRRLTAEQVHLLE 78
G GD + G G+ + + +++S+RR + +++ T EQ+ LE
Sbjct: 129 GPGDDY-GVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELE 187
Query: 79 KSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 188 AEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|E1C0H3 [details] [associations]
symbol:NKX6-3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 CTD:157848 OMA:SFYKLSP
KO:K09351 EMBL:AADN02054827 IPI:IPI00600356 RefSeq:XP_428808.2
Ensembl:ENSGALT00000017098 GeneID:431254 KEGG:gga:431254
NextBio:20830730 Uniprot:E1C0H3
Length = 259
Score = 121 (47.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 60 EQLPEKKRR---LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+ L +KK T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +
Sbjct: 133 DSLHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTK 192
Query: 117 WKTK 120
W+ K
Sbjct: 193 WRKK 196
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 186 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 63 PEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P K+R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 187 PRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
>FB|FBgn0000061 [details] [associations]
symbol:al "aristaless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0035015
"elongation of arista core" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
"leg disc development" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
GO:GO:0007480 Uniprot:Q06453
Length = 408
Score = 124 (48.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 56 CYYDEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWF 110
C DE P++K+R T+ Q+ LEK+F + + + +LA K+GL ++ VWF
Sbjct: 74 CEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWF 133
Query: 111 QNRRARWKTKQ 121
QNRRA+W+ ++
Sbjct: 134 QNRRAKWRKQE 144
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 61 QLPEKKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
Q KKR T Q+ LE+ F + E++ QL++ L L RQV +WFQNRR K
Sbjct: 35 QRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KE 92
Query: 120 KQLER 124
K+L R
Sbjct: 93 KKLNR 97
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 62 LPEKKRRL-TA---EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARW 117
L K +R+ TA Q+ LE +FE + + + QLA L L QV VWFQNRR ++
Sbjct: 32 LARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKF 91
Query: 118 KTKQLE 123
K ++LE
Sbjct: 92 KRQKLE 97
>TAIR|locus:2008505 [details] [associations]
symbol:AT1G61200 "AT1G61200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677
eggNOG:KOG0483 EMBL:AC002294 IPI:IPI00527907 PIR:H96637
RefSeq:NP_176315.1 EnsemblPlants:AT1G61200.1 GeneID:842413
KEGG:ath:AT1G61200 TAIR:At1g61200 HOGENOM:HOG000114069
PhylomeDB:O22726 ProtClustDB:CLSN2679394 Genevestigator:O22726
Uniprot:O22726
Length = 71
Score = 103 (41.3 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 1 MESGRLFFDRSSCPGN-MLFLGNGDSFF--GGARSMMSMEETSKRRXXXXXXXXXXXXCY 57
MES FF+ S+ GN M F N + GG RSMM+ EETSKRR Y
Sbjct: 1 MESNSFFFNPSASHGNNMFFFRNLNPVVQGGGTRSMMNKEETSKRRPFFSSLEDPYDDDY 60
Query: 58 YDEQL 62
YD+ L
Sbjct: 61 YDDHL 65
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 64 EKKR--RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
+KKR R TA+Q+ LE SF+ + +++ QL+++LGL PRQ+ WFQNRR + K Q
Sbjct: 32 KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKA-Q 90
Query: 122 LER 124
ER
Sbjct: 91 HER 93
>UNIPROTKB|P47237 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115
HOGENOM:HOG000230939 EMBL:S69508 IPI:IPI00819463 PIR:I51234
UniGene:Gga.556 ProteinModelPortal:P47237 SMR:P47237 STRING:P47237
Ensembl:ENSGALT00000040116 ArrayExpress:P47237 Uniprot:P47237
Length = 216
Score = 111 (44.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 9 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 68
Query: 121 Q 121
+
Sbjct: 69 E 69
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 251 SDDGRSYFSDVLVVAPDHVSNQQHEEPLG 279
S +GRSY D P H+ + +P+G
Sbjct: 157 SVNGRSY--DTYT--PPHMQTHMNSQPMG 181
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 121 (47.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
D++ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 98 DDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 157
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 158 RAKWRRQE 165
>UNIPROTKB|E9PIX4 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
IPI:IPI00975481 ProteinModelPortal:E9PIX4 SMR:E9PIX4
Ensembl:ENST00000464174 ArrayExpress:E9PIX4 Bgee:E9PIX4
Uniprot:E9PIX4
Length = 221
Score = 111 (44.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 8 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 67
Query: 121 Q 121
+
Sbjct: 68 E 68
Score = 40 (19.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 251 SDDGRSYFSDVLVVAPDHVSNQQHEEPLG 279
S +GRSY D P H+ + +P+G
Sbjct: 162 SVNGRSY--DTYT--PPHMQTHMNSQPMG 186
>UNIPROTKB|E2R395 [details] [associations]
symbol:NKX6-3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
CTD:157848 KO:K09351 RefSeq:XP_849158.1 Ensembl:ENSCAFT00000009208
GeneID:607413 KEGG:cfa:607413 NextBio:20893140 Uniprot:E2R395
Length = 262
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 147 TGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197
>MGI|MGI:1921811 [details] [associations]
symbol:Nkx6-3 "NK6 homeobox 3" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1921811 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
GeneTree:ENSGT00680000099625 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 CTD:157848 OMA:SFYKLSP OrthoDB:EOG44TP8F
EMBL:DQ093570 EMBL:AK018683 EMBL:AK147163 IPI:IPI00316492
RefSeq:NP_083278.1 UniGene:Mm.290028 ProteinModelPortal:Q3UHX8
SMR:Q3UHX8 STRING:Q3UHX8 PhosphoSite:Q3UHX8 PRIDE:Q3UHX8
Ensembl:ENSMUST00000071588 GeneID:74561 KEGG:mmu:74561
InParanoid:Q3UHX8 KO:K09351 NextBio:341094 Bgee:Q3UHX8
Genevestigator:Q3UHX8 Uniprot:Q3UHX8
Length = 262
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 148 TGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 198
>RGD|1597780 [details] [associations]
symbol:Nkx6-3 "NK6 homeobox 3" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1597780
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473970
GeneTree:ENSGT00680000099625 CTD:157848 OMA:SFYKLSP
OrthoDB:EOG44TP8F KO:K09351 IPI:IPI00191962 RefSeq:NP_001102925.1
UniGene:Rn.132252 Ensembl:ENSRNOT00000024532 GeneID:685102
KEGG:rno:685102 UCSC:RGD:1597780 NextBio:728965 Uniprot:D3ZCL0
Length = 262
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 148 TGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 198
>UNIPROTKB|E1BA63 [details] [associations]
symbol:LOC784372 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:SFYKLSP KO:K09351
EMBL:DAAA02060932 IPI:IPI00688482 RefSeq:XP_002698770.1
Ensembl:ENSBTAT00000047361 GeneID:784372 KEGG:bta:784372
NextBio:20926655 Uniprot:E1BA63
Length = 263
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 147 TGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197
>UNIPROTKB|A6NJ46 [details] [associations]
symbol:NKX6-3 "Homeobox protein Nkx-6.3" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471080
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC113133
HOGENOM:HOG000060127 HOVERGEN:HBG070987 EMBL:AK057898
IPI:IPI00065178 IPI:IPI00784472 RefSeq:NP_689781.1
UniGene:Hs.647132 ProteinModelPortal:A6NJ46 SMR:A6NJ46
STRING:A6NJ46 PhosphoSite:A6NJ46 PRIDE:A6NJ46 DNASU:157848
Ensembl:ENST00000425142 Ensembl:ENST00000518699
Ensembl:ENST00000524115 GeneID:157848 KEGG:hsa:157848
UCSC:uc003xoa.2 CTD:157848 GeneCards:GC08M041503 HGNC:HGNC:26328
HPA:HPA042790 MIM:610772 neXtProt:NX_A6NJ46 PharmGKB:PA145148400
eggNOG:NOG258693 OMA:SFYKLSP OrthoDB:EOG44TP8F ChiTaRS:NKX6-3
GenomeRNAi:157848 NextBio:87562 Bgee:A6NJ46 CleanEx:HS_NKX6-3
Genevestigator:A6NJ46 Uniprot:A6NJ46
Length = 265
Score = 120 (47.3 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
T Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 147 TGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 197
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 128 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 188 RAKWRRQE 195
>ZFIN|ZDB-GENE-040724-40 [details] [associations]
symbol:lbx1a "ladybird homeobox 1a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040724-40 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 HOGENOM:HOG000007247
HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP EMBL:BX950184
EMBL:AL928816 IPI:IPI00513398 RefSeq:NP_001020703.1
UniGene:Dr.135691 Ensembl:ENSDART00000045351 GeneID:564103
KEGG:dre:564103 CTD:564103 InParanoid:Q6ZM39 OMA:DHTTSKE
NextBio:20885231 Uniprot:Q6ZM39
Length = 269
Score = 120 (47.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 63 PEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P+K+R+ T Q++ LEK F + L P + Q+A++LGL QV WFQNRRA+ K
Sbjct: 122 PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLK 181
Query: 119 TKQLE 123
+ LE
Sbjct: 182 -RDLE 185
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 129 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 189 RAKWRRQE 196
>UNIPROTKB|E1BHB8 [details] [associations]
symbol:LOC615339 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
Length = 351
Score = 122 (48.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 129 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 189 RAKWRRQE 196
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 102 (41.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
EK R + + L LEK F + RK +LA L L RQV +WFQNRRA+
Sbjct: 2 EKYRVVYTDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAK 55
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 102 (41.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 66 KRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++ T Q LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 11 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63
>UNIPROTKB|G3V5W7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
Length = 162
Score = 111 (44.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 73 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 132
Query: 121 Q 121
+
Sbjct: 133 E 133
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 119 (46.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/110 (32%), Positives = 48/110 (43%)
Query: 11 SSCPGNMLFLGN-GDSFFGGARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRR- 68
+S PG + G G+ + + ME+ S RR K+R
Sbjct: 118 ASSPGLVDTTGGPGEDYEVLGSTASEMEKKSSRRKKESSDNQESRGKPEGGSKARKERTA 177
Query: 69 LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 178 FTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 119 (46.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 63 PEKKRRLTA---EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
PE KR TA +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 164 PEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 222
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 115 (45.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQV +WFQNRR +
Sbjct: 79 YNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMK 138
Query: 117 WK 118
WK
Sbjct: 139 WK 140
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 128 EEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 188 RAKWRRQE 195
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 129 EEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 189 RAKWRRQE 196
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
+E+ P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 129 EEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 189 RAKWRRQE 196
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
+ Q+ LEK F L R+ ++A+ L L+ QV VWFQNRR + K ++ ER
Sbjct: 9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
LEK F L +R+ +++ LGL RQV +WFQNRR +WK
Sbjct: 10 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 51
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
LEK F L +R+ +++ LGL RQV +WFQNRR +WK
Sbjct: 26 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 67
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
LEK F L +R+ +++ LGL RQV +WFQNRR +WK
Sbjct: 30 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 71
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 101 (40.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
LEK F L +R+ +++ LGL RQV +WFQNRR +WK
Sbjct: 30 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 71
>UNIPROTKB|F1NKM9 [details] [associations]
symbol:CNOT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 EMBL:AADN02049009
EMBL:AADN02049010 IPI:IPI00592679 Ensembl:ENSGALT00000037090
Uniprot:F1NKM9
Length = 151
Score = 107 (42.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
T++Q+ LEK F + + + LA L L QV VWFQNRR +W+ + LE+
Sbjct: 82 TSDQLARLEKEFARQQYMVGTERCLLASALHLTEEQVKVWFQNRRIKWRKQSLEQ 136
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 118 (46.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 58 YDEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQN 112
+ ++ KKRR T Q++ LEK F + L P + Q+A++LGL QV WFQN
Sbjct: 117 FGQRQASKKRRKSRTAFTNHQIYELEKRFWYQKYLSPADRDQIAQQLGLTNAQVITWFQN 176
Query: 113 RRARWKTKQLE 123
RRA+ K + LE
Sbjct: 177 RRAKLK-RDLE 186
>ZFIN|ZDB-GENE-990415-236 [details] [associations]
symbol:rx1 "retinal homeobox gene 1" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
[GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
"camera-type eye photoreceptor cell differentiation"
evidence=IGI;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
Length = 330
Score = 120 (47.3 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 59 DEQLPEKKRR-----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNR 113
D + P+KK R T Q+H LE++FE + + + +LA K+ L +V VWFQNR
Sbjct: 129 DGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 188
Query: 114 RARWKTKQ 121
RA+W+ ++
Sbjct: 189 RAKWRRQE 196
>UNIPROTKB|Q9YI38 [details] [associations]
symbol:GGMOXr1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
Length = 240
Score = 117 (46.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 33 MMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERK 92
M + + SKR+ + +++ T EQ+ LE F N L R+
Sbjct: 128 METERKASKRKKEHSESQPSSSKAEGSSRSRKERTAFTKEQLRELEAEFAHHNYLTRLRR 187
Query: 93 GQLAKKLGLQPRQVAVWFQNRRARWK 118
++A L L RQV VWFQNRR +WK
Sbjct: 188 YEIAVNLDLTERQVKVWFQNRRMKWK 213
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 100 (40.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/59 (40%), Positives = 30/59 (50%)
Query: 63 PEKKR---RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P+ KR T Q LEK F L R ++A L L RQ+ +WFQNRR +WK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 100 (40.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/59 (40%), Positives = 30/59 (50%)
Query: 63 PEKKR---RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P+ KR T Q LEK F L R ++A L L RQ+ +WFQNRR +WK
Sbjct: 3 PDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
>UNIPROTKB|H9KV25 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:H9KV25 SMR:H9KV25 Ensembl:ENST00000223140
Bgee:H9KV25 Uniprot:H9KV25
Length = 574
Score = 123 (48.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 21/59 (35%), Positives = 43/59 (72%)
Query: 61 QLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
Q+ +K R L ++Q+ LEK F+ ++ + +++ ++A+ +G+ P+++ VWFQNRRA+W+
Sbjct: 185 QIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR 243
>UNIPROTKB|F1PCY4 [details] [associations]
symbol:GBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AAEX03010280 EMBL:AAEX03010278
EMBL:AAEX03010279 EMBL:AAEX03010281 EMBL:AAEX03010282
Ensembl:ENSCAFT00000007725 OMA:XEADELL Uniprot:F1PCY4
Length = 251
Score = 117 (46.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 150 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 205
>UNIPROTKB|Q6F2E2 [details] [associations]
symbol:vex1 "Homeobox protein vex1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048264 "determination of ventral identity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030509
GO:GO:0048264 HSSP:P06602 EMBL:AC149072 HOVERGEN:HBG094147
UniGene:Str.30175 ProteinModelPortal:Q6F2E2 Xenbase:XB-GENE-483077
Uniprot:Q6F2E2
Length = 282
Score = 118 (46.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 34 MSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKR-RLTAEQVHLLEKSFEAENKLEPERK 92
+S E ++ +R DE + R + TAEQ+ LEKSF+ + K
Sbjct: 100 VSAESSTDQRVIGMTDTNKKTISVCDEDAASRARTKFTAEQLEELEKSFKENRYIGSSEK 159
Query: 93 GQLAKKLGLQPRQVAVWFQNRRARWK 118
+L+K L L Q+ WFQNRR ++K
Sbjct: 160 RRLSKVLKLSENQIKTWFQNRRMKFK 185
>UNIPROTKB|E2RRG1 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:TPLYPAY EMBL:AAEX03016734
Ensembl:ENSCAFT00000014553 NextBio:20861334 Uniprot:E2RRG1
Length = 288
Score = 118 (46.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 168 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 218
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 65 KKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KKR T Q LEK F L ER+ +++K + L RQV +WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 82
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 65 KKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KKR T Q LEK F L ER+ +++K + L RQV +WFQNRR + K E
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 86
>UNIPROTKB|G3V397 [details] [associations]
symbol:BARX2 "Homeobox protein BarH-like 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0001502 GO:GO:0000976 EMBL:AP003775 HGNC:HGNC:956
GO:GO:0042637 GO:GO:0014902 ProteinModelPortal:G3V397 SMR:G3V397
Ensembl:ENST00000526127 ArrayExpress:G3V397 Bgee:G3V397
Uniprot:G3V397
Length = 134
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 77 LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
LEK F+ + L + LA+ LGL QV W+QNRR +WK L+
Sbjct: 3 LEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK 49
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
T+ Q+ LEK F L R+ ++A L L RQ+ +WFQNRR ++K Q
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
T+ Q+ LEK F L R+ ++A L L RQ+ +WFQNRR ++K Q
Sbjct: 19 TSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQ 70
>WB|WBGene00000428 [details] [associations]
symbol:ceh-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:FO080880 EMBL:X52810 PIR:S13128
PIR:T16081 PIR:T37298 RefSeq:NP_508796.1 ProteinModelPortal:P53547
SMR:P53547 EnsemblMetazoa:F16H11.4.1 EnsemblMetazoa:F16H11.4.2
GeneID:191614 KEGG:cel:CELE_F16H11.4 UCSC:F16H11.4 CTD:191614
WormBase:F16H11.4 eggNOG:NOG286158 HOGENOM:HOG000020299
InParanoid:P53547 OMA:DANTPQT NextBio:949682 Uniprot:P53547
Length = 132
Score = 99 (39.9 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
T EQ+ LE F+ L + LA +L L QV +WFQNRR +WK
Sbjct: 9 TYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK 57
>UNIPROTKB|F1P2W4 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:AADN02047157
EMBL:AADN02047158 IPI:IPI00822098 Ensembl:ENSGALT00000038553
Uniprot:F1P2W4
Length = 250
Score = 116 (45.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 126 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 185
Query: 119 TK 120
+
Sbjct: 186 KR 187
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 105 (42.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 65 KKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
KKRR TA Q+ LEK+F + + + LA K L ++ VWFQNRRA+W+ +
Sbjct: 163 KKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKR 222
Query: 121 Q 121
+
Sbjct: 223 E 223
Score = 52 (23.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 204 DRLSSGCSGESAVVDEDGPQRVVDTGDSYFGCMDPVVDAAQS 245
D L G S A GPQR ++ G G D V+D + S
Sbjct: 295 DHLKEGSSPHQA-----GPQRGLEEGSPVSGVEDVVIDLSSS 331
>MGI|MGI:96208 [details] [associations]
symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
Genevestigator:P10628 Uniprot:P10628
Length = 250
Score = 113 (44.8 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 152 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
Score = 36 (17.7 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 196 QLSNNKTEDRLSSGCSGESA 215
+L N K SS CS +A
Sbjct: 212 KLPNTKGRSSSSSSCSSSAA 231
>ZFIN|ZDB-GENE-040718-149 [details] [associations]
symbol:meox1 "mesenchyme homeobox 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040718-149 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 EMBL:CR847827
IPI:IPI00865440 RefSeq:NP_001002450.2 UniGene:Dr.83318
Ensembl:ENSDART00000105661 GeneID:436723 KEGG:dre:436723
NextBio:20831164 Uniprot:F1Q4R9
Length = 253
Score = 116 (45.9 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 27/62 (43%), Positives = 33/62 (53%)
Query: 59 DEQLPEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
D +K R T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +
Sbjct: 165 DSNCKARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 224
Query: 117 WK 118
WK
Sbjct: 225 WK 226
>UNIPROTKB|Q9W7E8 [details] [associations]
symbol:koza "Homeobox protein koza" species:8355 "Xenopus
laevis" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 HSSP:P22808
EMBL:AF127225 RefSeq:NP_001079169.1 UniGene:Xl.510
ProteinModelPortal:Q9W7E8 SMR:Q9W7E8 GeneID:373737 KEGG:xla:373737
CTD:373737 Xenbase:XB-GENE-6252708 HOVERGEN:HBG006689 KO:K09348
Uniprot:Q9W7E8
Length = 213
Score = 114 (45.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 60 EQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
+Q + + QV LE+ F ++ L + QLAK L L QV +WFQNRR + K
Sbjct: 100 QQQKRSRAAFSHSQVIELERKFSSQKYLSAPERAQLAKSLKLTETQVKIWFQNRRYKTKR 159
Query: 120 KQL 122
KQL
Sbjct: 160 KQL 162
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 112 (44.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 63 PEKKR---RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
P++KR T Q LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 95 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 154
Query: 120 KQLERXXXXXXXXXXXXXXXXXXXVKENQK 149
+ E V+E+++
Sbjct: 155 EHKEESSSTPAPNEPTSAAASVEKVEEDEE 184
>MGI|MGI:94867 [details] [associations]
symbol:Dbx1 "developing brain homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021521 "ventral spinal cord interneuron specification"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94867
GO:GO:0005634 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
HOVERGEN:HBG005454 eggNOG:NOG257690 OrthoDB:EOG4T4CW6 CTD:120237
OMA:YHASPDP GO:GO:0021521 EMBL:S75837 EMBL:BC082541 EMBL:AK134473
IPI:IPI00132583 PIR:E41606 RefSeq:NP_001005232.1 UniGene:Mm.307176
ProteinModelPortal:P52950 SMR:P52950 STRING:P52950
PhosphoSite:P52950 PRIDE:P52950 Ensembl:ENSMUST00000032717
GeneID:13172 KEGG:mmu:13172 UCSC:uc009hbn.1 InParanoid:P52950
NextBio:283272 Bgee:P52950 CleanEx:MM_DBX1 Genevestigator:P52950
GermOnline:ENSMUSG00000030507 Uniprot:P52950
Length = 335
Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 77 LEKSFEAENKL-EPERKGQLAKKLGLQPRQVAVWFQNRRARWK-TKQLE 123
LEK+F+ + + +P+RK +LA KLGL+ QV +WFQNRR +W+ +K+ E
Sbjct: 196 LEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>RGD|1308896 [details] [associations]
symbol:Dbx1 "developing brain homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308896 GO:GO:0005634 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 HOGENOM:HOG000112172
HOVERGEN:HBG005454 HSSP:P23441 eggNOG:NOG257690 OrthoDB:EOG4T4CW6
CTD:120237 OMA:YHASPDP GO:GO:0021521 EMBL:AB197138 IPI:IPI00203263
RefSeq:NP_001009644.1 UniGene:Rn.104881 ProteinModelPortal:Q5NSW5
STRING:Q5NSW5 PRIDE:Q5NSW5 Ensembl:ENSRNOT00000019739 GeneID:292934
KEGG:rno:292934 UCSC:RGD:1308896 InParanoid:Q5NSW5 NextBio:635079
Genevestigator:Q5NSW5 Uniprot:Q5NSW5
Length = 335
Score = 118 (46.6 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 77 LEKSFEAENKL-EPERKGQLAKKLGLQPRQVAVWFQNRRARWK-TKQLE 123
LEK+F+ + + +P+RK +LA KLGL+ QV +WFQNRR +W+ +K+ E
Sbjct: 196 LEKTFQKQKYISKPDRK-KLASKLGLKDSQVKIWFQNRRMKWRNSKERE 243
>UNIPROTKB|G3MWL7 [details] [associations]
symbol:G3MWL7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:DAAA02030352
Ensembl:ENSBTAT00000063161 Uniprot:G3MWL7
Length = 263
Score = 116 (45.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 60 EQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
E+ P++ R + EQ+ LEK F ++ + +++ QLA +L L QV VWFQNRR +++
Sbjct: 165 ERSPKRIRTMFNLEQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVWFQNRRVKYQ 224
Query: 119 TKQ 121
+Q
Sbjct: 225 KQQ 227
>WB|WBGene00000449 [details] [associations]
symbol:ceh-27 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0043565 GO:GO:0010171 GO:GO:0000003 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0034243 HSSP:P23441 eggNOG:NOG301813
GeneTree:ENSGT00700000104098 EMBL:Z81085 GeneID:185853
KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313 RefSeq:NP_001256348.1
ProteinModelPortal:Q9XVN4 SMR:Q9XVN4 IntAct:Q9XVN4 STRING:Q9XVN4
EnsemblMetazoa:F46F3.1a UCSC:F46F3.1 WormBase:F46F3.1a
HOGENOM:HOG000022497 InParanoid:Q9XVN4 OMA:EKKMDGG NextBio:929744
Uniprot:Q9XVN4
Length = 263
Score = 116 (45.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 62 LPEKKRRL--TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
+ +KRR+ + +QVH+LE+ F+ L + LAK + L QV +WFQN+R + K
Sbjct: 96 ISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKR 155
Query: 120 KQLER 124
++ E+
Sbjct: 156 QEKEK 160
>UNIPROTKB|Q9XVN4 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243 HSSP:P23441
eggNOG:NOG301813 GeneTree:ENSGT00700000104098 EMBL:Z81085
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 PIR:T22313
RefSeq:NP_001256348.1 ProteinModelPortal:Q9XVN4 SMR:Q9XVN4
IntAct:Q9XVN4 STRING:Q9XVN4 EnsemblMetazoa:F46F3.1a UCSC:F46F3.1
WormBase:F46F3.1a HOGENOM:HOG000022497 InParanoid:Q9XVN4
OMA:EKKMDGG NextBio:929744 Uniprot:Q9XVN4
Length = 263
Score = 116 (45.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 62 LPEKKRRL--TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
+ +KRR+ + +QVH+LE+ F+ L + LAK + L QV +WFQN+R + K
Sbjct: 96 ISRRKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKR 155
Query: 120 KQLER 124
++ E+
Sbjct: 156 QEKEK 160
>ZFIN|ZDB-GENE-050309-27 [details] [associations]
symbol:lbx1b "ladybird homeobox 1b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050309-27 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 EMBL:CR855357 EMBL:CT573247
IPI:IPI00866445 RefSeq:NP_001156784.1 UniGene:Dr.109231
Ensembl:ENSDART00000007770 GeneID:793810 KEGG:dre:793810 CTD:793810
NextBio:20931589 Bgee:E7FDX5 Uniprot:E7FDX5
Length = 265
Score = 116 (45.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 63 PEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P+K+R+ T Q++ LEK F + L P + Q+A +LGL QV WFQNRRA+ K
Sbjct: 118 PKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLK 177
Query: 119 TKQLE 123
+ LE
Sbjct: 178 -RDLE 181
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 98 (39.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 65 KKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KKR T Q LEK F L ER+ +++K + L RQV +WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 82
>UNIPROTKB|Q90789 [details] [associations]
symbol:Cnot "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0030903 "notochord development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099625 HOVERGEN:HBG016849 OrthoDB:EOG48GW4Q
HSSP:P14653 eggNOG:NOG249605 EMBL:AADN02049007 EMBL:X82575
IPI:IPI00679844 PIR:I50622 UniGene:Gga.677
Ensembl:ENSGALT00000037091 HOGENOM:HOG000202447 InParanoid:Q90789
Uniprot:Q90789
Length = 111
Score = 98 (39.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 72 EQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 124
EQ+ LE+ F + + + LA L L QV VWFQNRR +W+ + +E+
Sbjct: 26 EQLERLEQEFLKQQYMVGTERVDLAATLRLTETQVKVWFQNRRIKWRKQSMEQ 78
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 116 (45.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 149 YNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMK 208
Query: 117 WK 118
WK
Sbjct: 209 WK 210
>UNIPROTKB|F1MJZ3 [details] [associations]
symbol:F1MJZ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:DAAA02030352 IPI:IPI00697755 Ensembl:ENSBTAT00000047327
Uniprot:F1MJZ3
Length = 272
Score = 116 (45.9 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 60 EQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
E+ P++ R + EQ+ LEK F ++ + +++ QLA +L L QV VWFQNRR +++
Sbjct: 174 ERSPKRIRTMFNLEQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVWFQNRRVKYQ 233
Query: 119 TKQ 121
+Q
Sbjct: 234 KQQ 236
>ZFIN|ZDB-GENE-070810-7 [details] [associations]
symbol:nkx6.3 "NK6 homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-070810-7 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099625 EMBL:BX571947
IPI:IPI00996504 Ensembl:ENSDART00000125516 Bgee:F1R8I3
Uniprot:F1R8I3
Length = 273
Score = 116 (45.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 160 SGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 210
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 115 (45.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 150 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>UNIPROTKB|Q9C056 [details] [associations]
symbol:NKX6-2 "Homeobox protein Nkx-6.2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0022010
GO:GO:0031018 GO:GO:0000976 EMBL:CH471211 GO:GO:0021913
GO:GO:0045687 HSSP:P13297 EMBL:AL392043 GO:GO:0045686 GO:GO:0010455
GO:GO:0010454 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF184215
EMBL:BC101635 EMBL:BC104823 IPI:IPI00028161 RefSeq:NP_796374.1
UniGene:Hs.134013 ProteinModelPortal:Q9C056 SMR:Q9C056
STRING:Q9C056 PhosphoSite:Q9C056 DMDM:158564033 PRIDE:Q9C056
Ensembl:ENST00000368592 GeneID:84504 KEGG:hsa:84504 UCSC:uc001llr.2
CTD:84504 GeneCards:GC10M134598 HGNC:HGNC:19321 MIM:605955
neXtProt:NX_Q9C056 PharmGKB:PA134896334 InParanoid:Q9C056 KO:K09350
OMA:GPAGFKA PhylomeDB:Q9C056 GenomeRNAi:84504 NextBio:74300
Bgee:Q9C056 CleanEx:HS_NKX6-2 Genevestigator:Q9C056 Uniprot:Q9C056
Length = 277
Score = 116 (45.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 145 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 204
Query: 119 TK 120
+
Sbjct: 205 KR 206
>RGD|1307280 [details] [associations]
symbol:Nkx6-2 "NK6 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0010454 "negative regulation of
cell fate commitment" evidence=IEA;ISO] [GO:0010455 "positive
regulation of cell fate commitment" evidence=IEA;ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA;ISO] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA;ISO] [GO:0022010 "central nervous
system myelination" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045686 "negative regulation of glial
cell differentiation" evidence=IEA;ISO] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=IEA;ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1307280
GO:GO:0005634 GO:GO:0050885 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0022010 GO:GO:0031018 GO:GO:0000976 EMBL:CH473953
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 OrthoDB:EOG4JT064
GO:GO:0021912 CTD:84504 KO:K09350 OMA:GPAGFKA IPI:IPI00779623
RefSeq:NP_001101028.1 UniGene:Rn.222182 SMR:D3ZZX2
Ensembl:ENSRNOT00000054887 GeneID:309095 KEGG:rno:309095
UCSC:RGD:1307280 NextBio:660104 Uniprot:D3ZZX2
Length = 277
Score = 116 (45.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 145 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 204
Query: 119 TK 120
+
Sbjct: 205 KR 206
>UNIPROTKB|F1NNJ9 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454 CTD:84504
KO:K09350 OMA:GPAGFKA EMBL:AADN02047157 EMBL:AADN02047158
IPI:IPI00604205 RefSeq:NP_001186477.1 UniGene:Gga.2725
Ensembl:ENSGALT00000017097 GeneID:395591 KEGG:gga:395591
NextBio:20815664 Uniprot:F1NNJ9
Length = 278
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 148 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 207
Query: 119 TK 120
+
Sbjct: 208 KR 209
>ZFIN|ZDB-GENE-020117-2 [details] [associations]
symbol:gbx1 "gastrulation brain homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0060827 "regulation of canonical Wnt receptor
signaling pathway involved in neural plate anterior/posterior
pattern formation" evidence=IGI] [GO:0021555 "midbrain-hindbrain
boundary morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-020117-2 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 CTD:2636 eggNOG:NOG315879
HOGENOM:HOG000060099 HOVERGEN:HBG003967 KO:K09321 OMA:RQESPHS
OrthoDB:EOG4N5VXB GeneTree:ENSGT00660000095141 GO:GO:0021555
HSSP:P14653 EMBL:CT583690 EMBL:BC162948 EMBL:BC162949 EMBL:AF288763
IPI:IPI00506443 RefSeq:NP_777286.1 UniGene:Dr.81466 SMR:Q90ZB2
STRING:Q90ZB2 Ensembl:ENSDART00000105572 GeneID:142985
KEGG:dre:142985 InParanoid:Q90ZB2 NextBio:20797048 GO:GO:0060827
Uniprot:Q90ZB2
Length = 316
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 215 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 270
>UNIPROTKB|Q60554 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:10036
"Mesocricetus auratus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0051594 "detection of glucose" evidence=IDA]
[GO:0072560 "type B pancreatic cell maturation" evidence=IMP]
[GO:2000078 "positive regulation of type B pancreatic cell
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0051091 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0000976 GO:GO:2000078 GO:GO:0051594
HOVERGEN:HBG070987 GO:GO:0072560 EMBL:X81409 PIR:I48188
ProteinModelPortal:Q60554 SMR:Q60554 Uniprot:Q60554
Length = 364
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 244 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294
>ZFIN|ZDB-GENE-070626-1 [details] [associations]
symbol:nkx6.2 "NK6 transcription factor related,
locus 2" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003310 "pancreatic A
cell differentiation" evidence=IGI;IMP] [GO:0003309 "type B
pancreatic cell differentiation" evidence=IGI;IMP] [GO:0031018
"endocrine pancreas development" evidence=IGI;IMP] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070626-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0021522 GO:GO:0000976 GO:GO:0003310
GO:GO:0003309 eggNOG:NOG265304 HOGENOM:HOG000060127
HOVERGEN:HBG070987 OrthoDB:EOG4JT064 EMBL:DQ416765 IPI:IPI00511922
UniGene:Dr.15365 STRING:A3QRJ9 InParanoid:A3QRJ9 Uniprot:A3QRJ9
Length = 280
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 148 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 207
Query: 119 TK 120
+
Sbjct: 208 KR 209
>MGI|MGI:1206039 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;TAS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IGI] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IGI;IMP]
[GO:0031018 "endocrine pancreas development" evidence=IGI;IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044424 "intracellular part" evidence=IDA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IDA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IGI] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IGI]
Reactome:REACT_13641 InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1206039
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008283
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
Reactome:REACT_127416 GO:GO:0035094 GO:GO:0045666 GO:GO:0031018
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF357883 EMBL:BC138019
EMBL:BC138020 EMBL:AF291666 IPI:IPI00117513 RefSeq:NP_659204.1
UniGene:Mm.193072 ProteinModelPortal:Q99MA9 SMR:Q99MA9
STRING:Q99MA9 PhosphoSite:Q99MA9 PRIDE:Q99MA9
Ensembl:ENSMUST00000044125 GeneID:18096 KEGG:mmu:18096
UCSC:uc008yim.1 InParanoid:B2RQP4 NextBio:293251 Bgee:Q99MA9
Genevestigator:Q99MA9 GermOnline:ENSMUSG00000035187 Uniprot:Q99MA9
Length = 365
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 245 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295
>RGD|69318 [details] [associations]
symbol:Nkx6-1 "NK6 homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003323 "type B pancreatic cell
development" evidence=IEP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0007224
"smoothened signaling pathway" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA;ISO] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031018
"endocrine pancreas development" evidence=ISO] [GO:0032024 "positive
regulation of insulin secretion" evidence=IMP] [GO:0035094 "response
to nicotine" evidence=IEP] [GO:0042493 "response to drug"
evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044424 "intracellular part" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA;ISO] [GO:0045687 "positive regulation
of glial cell differentiation" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEP] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEP]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:69318 GO:GO:0005634 GO:GO:0022008 GO:GO:0042493
GO:GO:0008283 GO:GO:0043565 GO:GO:0032024 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:0003323 GO:GO:0071345 GeneTree:ENSGT00680000099625
GO:GO:0021913 GO:GO:0045687 GO:GO:0045686 CTD:4825 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 KO:K08030 OMA:TPLYPAY
OrthoDB:EOG4JT064 GO:GO:0021912 EMBL:AF004431 IPI:IPI00212312
RefSeq:NP_113925.1 UniGene:Rn.11387 ProteinModelPortal:O35762
SMR:O35762 STRING:O35762 Ensembl:ENSRNOT00000002928 GeneID:65193
KEGG:rno:65193 InParanoid:O35762 NextBio:614120
Genevestigator:O35762 GermOnline:ENSRNOG00000002149 Uniprot:O35762
Length = 365
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 245 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295
>UNIPROTKB|F1NZL8 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02056979 EMBL:AADN02056980
IPI:IPI00819365 Ensembl:ENSGALT00000038657 Uniprot:F1NZL8
Length = 153
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 56 CYYDEQLPEKKRR-LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
CY + P + R T EQ+ LE F A L + LA L L QV +WFQNRR
Sbjct: 15 CY---KKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRR 71
Query: 115 ARWKTKQ 121
+WK KQ
Sbjct: 72 TKWK-KQ 77
>UNIPROTKB|E1BXC6 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
"cell fate determination" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
development" evidence=IEA] [GO:0033365 "protein localization to
organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009611 GO:GO:0045944
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00602476
ProteinModelPortal:E1BXC6 SMR:E1BXC6 Ensembl:ENSGALT00000019804
ArrayExpress:E1BXC6 Uniprot:E1BXC6
Length = 286
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 73 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 132
Query: 121 Q 121
+
Sbjct: 133 E 133
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 251 SDDGRSYFSDVLVVAPDHVSNQQHEEPLG 279
S +GRSY D P H+ + +P+G
Sbjct: 227 SVNGRSY--DTYT--PPHMQTHMNSQPMG 251
>UNIPROTKB|G3V4N4 [details] [associations]
symbol:PAX6 "Paired box gene 6 (Aniridia, keratitis),
isoform CRA_b" species:9606 "Homo sapiens" [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IEA] [GO:0003322 "pancreatic A cell
development" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 EMBL:CH471064
GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0030334 GO:GO:0000790 GO:GO:0006366
GO:GO:0000981 GO:GO:0033365 GO:GO:0021983 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 GO:GO:0048708 GO:GO:0021912 GO:GO:0021902
GO:GO:0021778 GO:GO:0003322 GO:GO:0021918 EMBL:Z95332
UniGene:Hs.270303 UniGene:Hs.611376 HGNC:HGNC:8620 SMR:G3V4N4
Ensembl:ENST00000470027 Ensembl:ENST00000494377 Uniprot:G3V4N4
Length = 286
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 73 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 132
Query: 121 Q 121
+
Sbjct: 133 E 133
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 251 SDDGRSYFSDVLVVAPDHVSNQQHEEPLG 279
S +GRSY D P H+ + +P+G
Sbjct: 227 SVNGRSY--DTYT--PPHMQTHMNSQPMG 251
>UNIPROTKB|J9P8I3 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:GPAGFKA EMBL:AAEX03015714
Ensembl:ENSCAFT00000048528 Uniprot:J9P8I3
Length = 281
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D + + + +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+
Sbjct: 150 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 209
Query: 119 TK 120
+
Sbjct: 210 KR 211
>UNIPROTKB|E1BNQ7 [details] [associations]
symbol:NKX6-1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0045687
"positive regulation of glial cell differentiation" evidence=IEA]
[GO:0045686 "negative regulation of glial cell differentiation"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045666
GO:GO:0031018 GO:GO:0000976 GO:GO:0007224 GO:GO:0048709
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 CTD:4825 KO:K08030 OMA:TPLYPAY GO:GO:0021912
EMBL:DAAA02018306 IPI:IPI00696939 RefSeq:NP_001193167.1
UniGene:Bt.112406 Ensembl:ENSBTAT00000003266 GeneID:616211
KEGG:bta:616211 NextBio:20900018 Uniprot:E1BNQ7
Length = 366
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 242 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 292
>UNIPROTKB|P78426 [details] [associations]
symbol:NKX6-1 "Homeobox protein Nkx-6.1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0035094 "response to nicotine"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0071345
"cellular response to cytokine stimulus" evidence=IEA] [GO:0071375
"cellular response to peptide hormone stimulus" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0031018
"endocrine pancreas development" evidence=TAS] [GO:2000078
"positive regulation of type B pancreatic cell development"
evidence=ISS] [GO:0072560 "type B pancreatic cell maturation"
evidence=ISS] [GO:0051594 "detection of glucose" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0031016 "pancreas
development" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Reactome:REACT_111045
GO:GO:0051091 GO:GO:0042493 GO:GO:0008283 GO:GO:0045944
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0009887 GO:GO:0035094 GO:GO:0045666
GO:GO:0000976 GO:GO:0071375 GO:GO:0007224 GO:GO:0048709
GO:GO:2000078 GO:GO:0071345 GO:GO:0021913 GO:GO:0051594
GO:GO:0045687 GO:GO:0045686 EMBL:U66799 EMBL:U66797 EMBL:U66798
EMBL:AC096766 IPI:IPI00019774 RefSeq:NP_006159.2 UniGene:Hs.546270
ProteinModelPortal:P78426 SMR:P78426 STRING:P78426
PhosphoSite:P78426 DMDM:288558819 PRIDE:P78426 DNASU:4825
Ensembl:ENST00000295886 GeneID:4825 KEGG:hsa:4825 UCSC:uc003hpa.1
CTD:4825 GeneCards:GC04M085339 HGNC:HGNC:7839 HPA:HPA036774
MIM:602563 neXtProt:NX_P78426 PharmGKB:PA31646 eggNOG:NOG265304
HOGENOM:HOG000060127 HOVERGEN:HBG070987 InParanoid:P78426 KO:K08030
OMA:TPLYPAY OrthoDB:EOG4JT064 PhylomeDB:P78426 GenomeRNAi:4825
NextBio:18584 ArrayExpress:P78426 Bgee:P78426 CleanEx:HS_NKX6-1
Genevestigator:P78426 GermOnline:ENSG00000163623 GO:GO:0021912
GO:GO:0072560 Uniprot:P78426
Length = 367
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+ +Q+ LEK+FE L + +LA LG+ QV VWFQNRR +W+ K
Sbjct: 244 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294
>UNIPROTKB|E1B707 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
EMBL:DAAA02030322 IPI:IPI00705587 RefSeq:NP_001179057.1
UniGene:Bt.106435 Ensembl:ENSBTAT00000022088 GeneID:538906
KEGG:bta:538906 NextBio:20877656 Uniprot:E1B707
Length = 196
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+ + TA+QV LE+ F + L P + LA +LGL QV WFQNRRA+ K
Sbjct: 87 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRRAKLK 141
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQV +WFQNRR +
Sbjct: 143 YNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMK 202
Query: 117 WK 118
WK
Sbjct: 203 WK 204
>MGI|MGI:103220 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
musculus" [GO:0001757 "somite specification" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
GermOnline:ENSMUSG00000001493 Uniprot:P32442
Length = 253
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+++ T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 172 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 226
>RGD|1308911 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
Length = 253
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+++ T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 172 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 226
>UNIPROTKB|A2VDR0 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
Length = 254
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+++ T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 173 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+++ T EQ+ LE F N L R+ ++A L L RQV VWFQNRR +WK
Sbjct: 173 KERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>UNIPROTKB|F1NXF7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
IPI:IPI00572110 Ensembl:ENSGALT00000040112 ArrayExpress:F1NXF7
Uniprot:F1NXF7
Length = 186
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 61 QLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTK 120
+L + T EQ+ LEK FE + + + +LA K+ L ++ VWF NRRA+W+ +
Sbjct: 125 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 184
Query: 121 Q 121
+
Sbjct: 185 E 185
>FB|FBgn0011758 [details] [associations]
symbol:B-H1 "BarH1" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003677 EMBL:AE014298
GO:GO:0007601 GO:GO:0043565 GO:GO:0050896 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0000122 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
EMBL:M73079 EMBL:M73259 EMBL:M73078 EMBL:AY058309 PIR:B39369
RefSeq:NP_523387.1 UniGene:Dm.2610 ProteinModelPortal:Q24255
SMR:Q24255 DIP:DIP-19778N MINT:MINT-881308 STRING:Q24255
EnsemblMetazoa:FBtr0074430 GeneID:32724 KEGG:dme:Dmel_CG5529
CTD:32724 FlyBase:FBgn0011758 eggNOG:NOG263484 InParanoid:Q24255
KO:K09360 OMA:RFMINDI PhylomeDB:Q24255 GenomeRNAi:32724
NextBio:780048 Bgee:Q24255 GermOnline:CG5529 GO:GO:0008052
Uniprot:Q24255
Length = 544
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 64 EKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++K R T Q+ LEKSFE + L + + +LA KL L QV W+QNRR +WK
Sbjct: 299 QRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK 355
>WB|WBGene00000442 [details] [associations]
symbol:ceh-19 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104206 EMBL:Z11794 EMBL:Z11795 EMBL:FO080909
PIR:S26301 PIR:T16113 RefSeq:NP_001023141.1 RefSeq:NP_001023142.1
ProteinModelPortal:P26797 SMR:P26797 EnsemblMetazoa:F20D12.6b
GeneID:177590 KEGG:cel:CELE_F20D12.6 UCSC:F20D12.6a CTD:177590
WormBase:F20D12.6a WormBase:F20D12.6b eggNOG:NOG279638
InParanoid:P26797 OMA:SARKHDY NextBio:897488 Uniprot:P26797
Length = 199
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 64 EKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQ 121
E+K R +A Q+ LE F+ + L ++ QL++ L L Q+ WFQNRR +WK KQ
Sbjct: 94 ERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWK-KQ 152
Query: 122 L 122
L
Sbjct: 153 L 153
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 108 (43.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 60 EQLPEKKRRL--TAEQVHLLEKSFEAENKLE-PERKGQLAKKLGLQPRQVAVWFQNRRAR 116
E KKRR+ + Q + LE+ F + L PER+ QLA L L P QV +WFQN R +
Sbjct: 74 EHEKRKKRRVLFSKAQTYELERRFRQQRYLSAPERE-QLAHLLRLTPTQVKIWFQNHRYK 132
Query: 117 WKTKQLE 123
K ++E
Sbjct: 133 MKRARIE 139
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 65 KKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
KKR T Q LEK F L +R+ ++A+ L L RQV +WFQNRR + K +
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKD 107
Query: 124 R 124
R
Sbjct: 108 R 108
>UNIPROTKB|O42230 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG315879 HOVERGEN:HBG003967 KO:K09321 OrthoDB:EOG4N5VXB
EMBL:AF022151 IPI:IPI00603632 RefSeq:NP_990399.1 UniGene:Gga.565
ProteinModelPortal:O42230 SMR:O42230 STRING:O42230 GeneID:395950
KEGG:gga:395950 CTD:2637 HOGENOM:HOG000046878 InParanoid:O42230
NextBio:20816015 Uniprot:O42230
Length = 340
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 240 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 295
>UNIPROTKB|F1M7G6 [details] [associations]
symbol:Gbx1 "Protein Gbx1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 IPI:IPI00207925
Ensembl:ENSRNOT00000017854 RGD:621864 NextBio:623429
ArrayExpress:F1M7G6 Uniprot:F1M7G6
Length = 340
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 239 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 294
>ZFIN|ZDB-GENE-020509-2 [details] [associations]
symbol:gbx2 "gastrulation brain homeo box 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-020509-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 HOVERGEN:HBG003967 KO:K09321
GeneTree:ENSGT00660000095141 CTD:2637 OMA:HQEAARK HSSP:P14653
EMBL:CR847983 EMBL:BC059413 EMBL:AB075028 IPI:IPI00494659
RefSeq:NP_694496.1 UniGene:Dr.17548 SMR:Q8QGU1 STRING:Q8QGU1
Ensembl:ENSDART00000015333 GeneID:245948 KEGG:dre:245948
InParanoid:Q8QGU1 NextBio:20797200 Uniprot:Q8QGU1
Length = 342
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 242 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 297
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 151 YNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMK 210
Query: 117 WK 118
WK
Sbjct: 211 WK 212
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 151 YNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMK 210
Query: 117 WK 118
WK
Sbjct: 211 WK 212
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 151 YNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMK 210
Query: 117 WK 118
WK
Sbjct: 211 WK 212
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 151 YNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMK 210
Query: 117 WK 118
WK
Sbjct: 211 WK 212
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 115 (45.5 bits), Expect = 0.00012, P = 0.00012
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +
Sbjct: 151 YNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMK 210
Query: 117 WK 118
WK
Sbjct: 211 WK 212
>UNIPROTKB|F1N3Z2 [details] [associations]
symbol:F1N3Z2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:RQESPHS GeneTree:ENSGT00660000095141 EMBL:DAAA02012018
IPI:IPI00713510 Ensembl:ENSBTAT00000014768 Uniprot:F1N3Z2
Length = 343
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 242 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 297
>UNIPROTKB|E2RC01 [details] [associations]
symbol:GBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048483
"autonomic nervous system development" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0021930 "cerebellar
granule cell precursor proliferation" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0021555
"midbrain-hindbrain boundary morphogenesis" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001755 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0021549 GO:GO:0001569 KO:K09321 GeneTree:ENSGT00660000095141
CTD:2637 OMA:HQEAARK GO:GO:0048483 GO:GO:0021930 GO:GO:0021555
GO:GO:0021568 EMBL:AAEX03014475 RefSeq:XP_543300.1
Ensembl:ENSCAFT00000019301 GeneID:486174 KEGG:cfa:486174
NextBio:20860001 Uniprot:E2RC01
Length = 348
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>UNIPROTKB|P52951 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0021555
"midbrain-hindbrain boundary morphogenesis" evidence=IEA]
[GO:0021568 "rhombomere 2 development" evidence=IEA] [GO:0021930
"cerebellar granule cell precursor proliferation" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0048483
"autonomic nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0007399
EMBL:CH471063 GO:GO:0001755 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0021549 GO:GO:0001569
EMBL:AC079135 eggNOG:NOG315879 HOGENOM:HOG000060099
HOVERGEN:HBG003967 KO:K09321 OrthoDB:EOG4N5VXB CTD:2637 EMBL:U31468
EMBL:AF118452 EMBL:BC137448 EMBL:BC137449 EMBL:U02080
IPI:IPI00006053 PIR:S39540 RefSeq:NP_001476.2 UniGene:Hs.184945
ProteinModelPortal:P52951 SMR:P52951 STRING:P52951
PhosphoSite:P52951 DMDM:12644308 PaxDb:P52951 PRIDE:P52951
Ensembl:ENST00000306318 GeneID:2637 KEGG:hsa:2637 UCSC:uc002vvw.1
GeneCards:GC02M237090 HGNC:HGNC:4186 MIM:601135 neXtProt:NX_P52951
PharmGKB:PA28600 InParanoid:P52951 OMA:HQEAARK PhylomeDB:P52951
GenomeRNAi:2637 NextBio:10396 ArrayExpress:P52951 Bgee:P52951
CleanEx:HS_GBX2 Genevestigator:P52951 GermOnline:ENSG00000168505
GO:GO:0048483 GO:GO:0021930 GO:GO:0021555 GO:GO:0021568
Uniprot:P52951
Length = 348
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>UNIPROTKB|F1SM11 [details] [associations]
symbol:GBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0021549
GO:GO:0001569 KO:K09321 GeneTree:ENSGT00660000095141 CTD:2637
OMA:HQEAARK GO:GO:0048483 GO:GO:0021930 GO:GO:0021555 GO:GO:0021568
EMBL:CU694589 RefSeq:XP_003133803.1 Ensembl:ENSSSCT00000017772
GeneID:100514608 KEGG:ssc:100514608 Uniprot:F1SM11
Length = 348
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>MGI|MGI:95668 [details] [associations]
symbol:Gbx2 "gastrulation brain homeobox 2" species:10090 "Mus
musculus" [GO:0001569 "patterning of blood vessels"
evidence=IGI;IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0021549 "cerebellum development"
evidence=IMP] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IMP] [GO:0021568 "rhombomere 2 development"
evidence=IMP] [GO:0021794 "thalamus development" evidence=IMP]
[GO:0021884 "forebrain neuron development" evidence=IMP]
[GO:0021930 "cerebellar granule cell precursor proliferation"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
[GO:0035239 "tube morphogenesis" evidence=IMP] [GO:0042472 "inner
ear morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048483 "autonomic nervous system
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95668 GO:GO:0005634 GO:GO:0007411
GO:GO:0001755 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0021549 GO:GO:0001569 GO:GO:0021884
eggNOG:NOG315879 HOGENOM:HOG000060099 HOVERGEN:HBG003967 KO:K09321
OrthoDB:EOG4N5VXB GeneTree:ENSGT00660000095141 CTD:2637 OMA:HQEAARK
GO:GO:0048483 GO:GO:0021930 GO:GO:0021555 GO:GO:0021568 EMBL:Z48800
EMBL:U74300 EMBL:BC116965 EMBL:BC120492 EMBL:L39770 EMBL:M81661
IPI:IPI00137999 PIR:S52720 RefSeq:NP_034392.1 UniGene:Mm.204730
ProteinModelPortal:P48031 SMR:P48031 STRING:P48031
PhosphoSite:P48031 PRIDE:P48031 Ensembl:ENSMUST00000036954
GeneID:14472 KEGG:mmu:14472 UCSC:uc007bzb.1 InParanoid:Q14A66
NextBio:286138 Bgee:P48031 CleanEx:MM_GBX2 Genevestigator:P48031
GermOnline:ENSMUSG00000034486 Uniprot:P48031
Length = 348
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>UNIPROTKB|G3V8J6 [details] [associations]
symbol:Gbx2 "Gastrulation brain homeobox 2" species:10116
"Rattus norvegicus" [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0021555
"midbrain-hindbrain boundary morphogenesis" evidence=IEA]
[GO:0021568 "rhombomere 2 development" evidence=IEA] [GO:0021930
"cerebellar granule cell precursor proliferation" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048483
"autonomic nervous system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:621866 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH473997 KO:K09321 GeneTree:ENSGT00660000095141 CTD:2637
OMA:HQEAARK RefSeq:NP_446160.1 UniGene:Rn.92363
Ensembl:ENSRNOT00000026419 GeneID:114500 KEGG:rno:114500
NextBio:618559 Uniprot:G3V8J6
Length = 348
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>UNIPROTKB|E1BJ47 [details] [associations]
symbol:GBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048483 "autonomic
nervous system development" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0021930 "cerebellar granule cell
precursor proliferation" evidence=IEA] [GO:0021568 "rhombomere 2
development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001569 "patterning
of blood vessels" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001755 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0021549 GO:GO:0001569 KO:K09321 GeneTree:ENSGT00660000095141
CTD:2637 OMA:HQEAARK GO:GO:0048483 GO:GO:0021930 GO:GO:0021555
GO:GO:0021568 EMBL:DAAA02009341 IPI:IPI00715123
RefSeq:NP_001179074.1 UniGene:Bt.106426 Ensembl:ENSBTAT00000011716
GeneID:507344 KEGG:bta:507344 NextBio:20868018 Uniprot:E1BJ47
Length = 349
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 249 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 304
>FB|FBgn0015561 [details] [associations]
symbol:unpg "unplugged" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0051960 "regulation of nervous
system development" evidence=IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007424 "open tracheal system development"
evidence=TAS] [GO:0007426 "tracheal outgrowth, open tracheal
system" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0007420
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007426
eggNOG:NOG315879 KO:K09321 GeneTree:ENSGT00660000095141 EMBL:U35427
EMBL:BT022753 RefSeq:NP_477146.1 UniGene:Dm.6807
ProteinModelPortal:Q4V5A3 SMR:Q4V5A3 STRING:Q4V5A3 PRIDE:Q4V5A3
EnsemblMetazoa:FBtr0088586 GeneID:35942 KEGG:dme:Dmel_CG1650
UCSC:CG1650-RA CTD:35942 FlyBase:FBgn0015561 InParanoid:Q4V5A3
OMA:FAQNHER OrthoDB:EOG4H70T3 PhylomeDB:Q4V5A3 GenomeRNAi:35942
NextBio:795976 Bgee:Q4V5A3 GO:GO:0051960 Uniprot:Q4V5A3
Length = 485
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LE+ F A+ L + Q+A L L QV +WFQNRRA+WK
Sbjct: 320 RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWK 375
>UNIPROTKB|Q28ZA9 [details] [associations]
symbol:unpg "Homeobox protein unplugged" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007420 "brain development" evidence=ISS] [GO:0051960
"regulation of nervous system development" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:CM000071 GenomeReviews:CM000071_GR
eggNOG:NOG315879 KO:K09321 OMA:FAQNHER OrthoDB:EOG4H70T3
GO:GO:0051960 RefSeq:XP_001361128.1 ProteinModelPortal:Q28ZA9
SMR:Q28ZA9 GeneID:4804593 KEGG:dpo:Dpse_GA14073 FlyBase:FBgn0074104
InParanoid:Q28ZA9 Uniprot:Q28ZA9
Length = 491
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LE+ F A+ L + Q+A L L QV +WFQNRRA+WK
Sbjct: 324 RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWK 379
>FB|FBgn0034520 [details] [associations]
symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
[GO:0007526 "larval somatic muscle development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
Uniprot:A1ZBV6
Length = 411
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D++ + +A Q+ LE FE L ++ LAK+L L Q+ +WFQNRR +WK
Sbjct: 116 DDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWK 175
Query: 119 TK 120
K
Sbjct: 176 RK 177
>ZFIN|ZDB-GENE-990415-105 [details] [associations]
symbol:hoxb4a "homeo box B4a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
Bgee:P22574 Uniprot:P22574
Length = 246
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 151 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207
>UNIPROTKB|Q14549 [details] [associations]
symbol:GBX1 "Homeobox protein GBX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000228 "nuclear chromosome" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC010973 GO:GO:0000228 EMBL:L11239 IPI:IPI00556582 PIR:S32510
RefSeq:NP_001092304.1 UniGene:Hs.647114 ProteinModelPortal:Q14549
SMR:Q14549 STRING:Q14549 PhosphoSite:Q14549 DMDM:115502392
PaxDb:Q14549 PRIDE:Q14549 DNASU:2636 Ensembl:ENST00000297537
GeneID:2636 KEGG:hsa:2636 UCSC:uc011kvg.2 CTD:2636
GeneCards:GC07M150845 HGNC:HGNC:4185 MIM:603354 neXtProt:NX_Q14549
PharmGKB:PA28599 eggNOG:NOG315879 HOGENOM:HOG000060099
HOVERGEN:HBG003967 InParanoid:Q14549 KO:K09321 OMA:RQESPHS
OrthoDB:EOG4N5VXB GenomeRNAi:2636 NextBio:10392 ArrayExpress:Q14549
Bgee:Q14549 CleanEx:HS_GBX1 Genevestigator:Q14549
GermOnline:ENSG00000164900 Uniprot:Q14549
Length = 363
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 262 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 317
>UNIPROTKB|I3LGR9 [details] [associations]
symbol:GBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09321 OMA:RQESPHS GeneTree:ENSGT00660000095141 EMBL:FP312819
RefSeq:XP_003360124.1 Ensembl:ENSSSCT00000030907 GeneID:100625616
KEGG:ssc:100625616 Uniprot:I3LGR9
Length = 365
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 264 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 319
>UNIPROTKB|J9P4P0 [details] [associations]
symbol:GBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AAEX03010280 EMBL:AAEX03010278
EMBL:AAEX03010279 EMBL:AAEX03010281 EMBL:AAEX03010282
Ensembl:ENSCAFT00000047932 Uniprot:J9P4P0
Length = 367
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 65 KKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++RR T+EQ+ LEK F + L + Q+A L L QV +WFQNRRA+WK
Sbjct: 266 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 321
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 161 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 161 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>MGI|MGI:1342288 [details] [associations]
symbol:Lbx2 "ladybird homeobox homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1342288 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 HSSP:P13297
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 CTD:85474
eggNOG:NOG235470 OMA:MVPRAPS EMBL:AF146150 EMBL:AK002897
EMBL:BC109347 IPI:IPI00624409 RefSeq:NP_034822.1 UniGene:Mm.20359
ProteinModelPortal:Q9WUN8 SMR:Q9WUN8 PhosphoSite:Q9WUN8
PRIDE:Q9WUN8 Ensembl:ENSMUST00000041265 GeneID:16815 KEGG:mmu:16815
UCSC:uc009cmi.1 InParanoid:Q9WUN8 OrthoDB:EOG4NKBWK NextBio:290696
Bgee:Q9WUN8 CleanEx:MM_LBX2 Genevestigator:Q9WUN8 Uniprot:Q9WUN8
Length = 195
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+ + TA+QV LE+ F + L P + LA +LGL QV WFQNRRA+ K
Sbjct: 86 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLK 140
>WB|WBGene00000429 [details] [associations]
symbol:ceh-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
GeneTree:ENSGT00680000099625 EMBL:AY246428 EMBL:AY246429
EMBL:FO080101 PIR:E87793 PIR:S05703 RefSeq:NP_491746.1
UniGene:Cel.19042 ProteinModelPortal:G5ECT8 SMR:G5ECT8
EnsemblMetazoa:C27A12.5 GeneID:191615 KEGG:cel:CELE_C27A12.5
CTD:191615 WormBase:C27A12.5 OMA:VGNERKQ NextBio:949686
Uniprot:G5ECT8
Length = 209
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
+A Q+ LEK+FE + + + QLA KL L QV VWFQNRR + K +LE
Sbjct: 134 SASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKVWFQNRRTKHKRVRLE 187
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 64 EKKRRLTAEQVHL-LEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
+K R + + L LEK F + RK +LA LGL RQV +WFQNRRA+
Sbjct: 30 DKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 83
>UNIPROTKB|F1SNT2 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 OMA:MVPRAPS EMBL:CU468647
RefSeq:XP_003125045.1 Ensembl:ENSSSCT00000009066 GeneID:100514830
KEGG:ssc:100514830 Uniprot:F1SNT2
Length = 196
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+ + TA+QV LE+ F + L P + LA +LGL QV WFQNRRA+ K
Sbjct: 87 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLK 141
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 59 DEQLPEKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
D++ P + TAEQ+ L+ F+ + +R+ LA++LGL Q+ +WFQN+RA+ K
Sbjct: 142 DDKRP--RTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQV +WFQNRR +
Sbjct: 175 YNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMK 234
Query: 117 WK 118
WK
Sbjct: 235 WK 236
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y+ P++ R T +QV LEK F L R+ ++A L L RQV +WFQNRR +
Sbjct: 175 YNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMK 234
Query: 117 WK 118
WK
Sbjct: 235 WK 236
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 64 EKKRRLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
+ + TA+QV LE+ F + L P + LA +LGL QV WFQNRRA+ K
Sbjct: 87 KSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLK 141
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 144 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 65 KKR-RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
KKR T Q LEK F L +R+ ++A+ L L RQV +WFQNRR + K
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 70 TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 123
+ Q+ LEK F L R+ ++A+ L L+ QV VWFQNRR + K ++ E
Sbjct: 9 STRQLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>ZFIN|ZDB-GENE-031016-2 [details] [associations]
symbol:hopx "HOP homeobox" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-031016-2 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 CTD:84525 GeneTree:ENSGT00390000017143
HOGENOM:HOG000112932 HOVERGEN:HBG051921 EMBL:AF536198 EMBL:BC096856
EMBL:BC153537 IPI:IPI00498482 RefSeq:NP_937852.1 UniGene:Dr.117691
UniGene:Dr.151001 ProteinModelPortal:Q8AYB8 SMR:Q8AYB8 PRIDE:Q8AYB8
Ensembl:ENSDART00000125203 GeneID:386589 KEGG:dre:386589
NextBio:20813951 Bgee:Q8AYB8 Uniprot:Q8AYB8
Length = 77
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 68 RLTAEQVHLLEKSFEAENKLEPERKGQL-AKKLGLQPRQVAVWFQNRRARWK 118
RLT +QV +LE++F +K E L A + GL Q AVWF+ R A+W+
Sbjct: 12 RLTEDQVKVLEENFTKVSKHPDETTLMLIAAECGLSEEQTAVWFRMRNAQWR 63
>FB|FBgn0004854 [details] [associations]
symbol:B-H2 "BarH2" species:7227 "Drosophila melanogaster"
[GO:0008052 "sensory organ boundary specification" evidence=IMP]
[GO:0008057 "eye pigment granule organization" evidence=IMP]
[GO:0001751 "compound eye photoreceptor cell differentiation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA;IC;NAS] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016055
GO:GO:0003677 EMBL:AE014298 GO:GO:0007601 GO:GO:0043565
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0046331 GO:GO:0001751 GO:GO:0008057 GO:GO:0007479
GO:GO:0008407 GO:GO:0007455 GeneTree:ENSGT00700000104206
eggNOG:NOG263484 GO:GO:0008052 EMBL:M82884 EMBL:M82887 EMBL:M82885
EMBL:M82886 EMBL:BT022144 PIR:A41726 PIR:S27806 RefSeq:NP_523386.1
UniGene:Dm.2611 ProteinModelPortal:Q24256 SMR:Q24256 STRING:Q24256
EnsemblMetazoa:FBtr0074429 GeneID:32723 KEGG:dme:Dmel_CG5488
UCSC:CG5488-RA CTD:32723 FlyBase:FBgn0004854 InParanoid:Q24256
OMA:ANKLELS OrthoDB:EOG4R22BQ PhylomeDB:Q24256 ChiTaRS:B-H2
GenomeRNAi:32723 NextBio:780043 Bgee:Q24256 GermOnline:CG5488
Uniprot:Q24256
Length = 645
Score = 117 (46.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 64 EKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
++K R T Q+ LEKSFE + L + + +LA KL L QV W+QNRR +WK
Sbjct: 380 QRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWK 436
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 11 SSCPGNMLFLGNGDSFFGGARSMMSMEETS 40
SS N GNG+ GG S +S ++ S
Sbjct: 308 SSSSNNNNGSGNGNMLLGGPGSSISGDQAS 337
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 63 PEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWK 118
P++ R T +QV LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 146 PKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202
>UNIPROTKB|F1SLF3 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:FP089556 RefSeq:XP_003125078.1 UniGene:Ssc.67372
Ensembl:ENSSSCT00000009097 GeneID:100521005 KEGG:ssc:100521005
Uniprot:F1SLF3
Length = 263
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 59 DEQLPEKKRR--LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
D + +K+ R EQ+ LEK F ++ L +++ QLA +L L QV VWFQNRR +
Sbjct: 163 DTERSQKRVRTMFNLEQLEELEKVFAKQHNLVGKKRAQLAAQLNLTENQVRVWFQNRRVK 222
Query: 117 WKTKQ 121
++ +Q
Sbjct: 223 YQKQQ 227
>UNIPROTKB|E1BEL0 [details] [associations]
symbol:EVX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00690000102189
KO:K09320 CTD:2128 OMA:LACHSGP GO:GO:0021913 EMBL:DAAA02010936
IPI:IPI00695220 RefSeq:NP_001179310.1 UniGene:Bt.106438
PRIDE:E1BEL0 Ensembl:ENSBTAT00000027866 GeneID:540239
KEGG:bta:540239 NextBio:20878512 Uniprot:E1BEL0
Length = 404
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 31/93 (33%), Positives = 42/93 (45%)
Query: 30 ARSMMSMEETSKRRXXXXXXXXXXXXCYYDEQLPEKKRRLTAEQVHLLEKSFEAENKLEP 89
A S ETSK C +Q+ + T EQ+ LEK F EN +
Sbjct: 150 ASSPNGSSETSKSNGSGGSQGTLA--CSASDQMRRYRTAFTREQIARLEKEFYRENYVSR 207
Query: 90 ERKGQLAKKLGLQPRQVAVWFQNRRARWKTKQL 122
R+ +LA L L + VWFQNRR + K ++L
Sbjct: 208 PRRCELAAALNLPETTIKVWFQNRRMKDKRQRL 240
>UNIPROTKB|Q90VZ9 [details] [associations]
symbol:HOXA7 "Homeobox protein Hox-A7" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 eggNOG:NOG238660
HOVERGEN:HBG016849 EMBL:AJ291729 EMBL:AF408695 IPI:IPI00573429
RefSeq:NP_989926.1 RefSeq:XP_003640750.1 RefSeq:XP_003640779.1
UniGene:Gga.5122 ProteinModelPortal:Q90VZ9 SMR:Q90VZ9
GeneID:100858514 GeneID:100858856 GeneID:395290 KEGG:gga:100858514
KEGG:gga:100858856 KEGG:gga:395290 CTD:3204 InParanoid:Q90VZ9
KO:K09307 OrthoDB:EOG4W9J4Z NextBio:20815375 Uniprot:Q90VZ9
Length = 219
Score = 112 (44.5 bits), Expect = 0.00016, P = 0.00016
Identities = 27/90 (30%), Positives = 40/90 (44%)
Query: 63 PEKKR---RLTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRARWKT 119
P++KR T Q LEK F L R+ ++A L L RQ+ +WFQNRR +WK
Sbjct: 127 PDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 186
Query: 120 KQLERXXXXXXXXXXXXXXXXXXXVKENQK 149
+ E V+E+++
Sbjct: 187 EHKEESSSTPAPNEPTSAAASVEKVEEDEE 216
>FB|FBgn0008636 [details] [associations]
symbol:hbn "homeobrain" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 HSSP:P06601
EMBL:AJ276705 ProteinModelPortal:Q9GRX3 SMR:Q9GRX3 STRING:Q9GRX3
PaxDb:Q9GRX3 PRIDE:Q9GRX3 FlyBase:FBgn0008636 InParanoid:Q9GRX3
OrthoDB:EOG4VX0NB ArrayExpress:Q9GRX3 Bgee:Q9GRX3 Uniprot:Q9GRX3
Length = 409
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 59 DEQLPEKKRR----LTAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRR 114
D + P K RR T Q+H LE++FE + + LA +L L +V VWFQNRR
Sbjct: 146 DMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNRR 205
Query: 115 ARWKTKQ 121
A+W+ ++
Sbjct: 206 AKWRKRE 212
>ZFIN|ZDB-GENE-000823-4 [details] [associations]
symbol:hoxa4a "homeo box A4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
Bgee:Q9PWL5 Uniprot:Q9PWL5
Length = 245
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 58 YDEQLPEKKRRL-TAEQVHLLEKSFEAENKLEPERKGQLAKKLGLQPRQVAVWFQNRRAR 116
Y +P++ R T +Q LEK F L R+ ++A + L RQV +WFQNRR +
Sbjct: 142 YSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMK 201
Query: 117 WK 118
WK
Sbjct: 202 WK 203
WARNING: HSPs involving 210 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 232 0.00085 113 3 11 23 0.47 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 460
No. of states in DFA: 608 (65 KB)
Total size of DFA: 195 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.82u 0.16s 19.98t Elapsed: 00:00:01
Total cpu time: 19.83u 0.16s 19.99t Elapsed: 00:00:01
Start: Mon May 20 20:53:47 2013 End: Mon May 20 20:53:48 2013
WARNINGS ISSUED: 2