Query 023296
Match_columns 284
No_of_seqs 198 out of 716
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 02:57:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023296.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023296hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 1.5E-82 3.3E-87 610.7 24.1 227 58-284 48-278 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 7.2E-31 1.6E-35 235.3 14.2 155 113-284 1-168 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 1E-27 2.2E-32 172.4 4.5 53 60-112 1-55 (55)
4 cd01842 SGNH_hydrolase_like_5 97.8 6.6E-05 1.4E-09 66.4 6.9 102 130-281 2-103 (183)
5 cd01829 SGNH_hydrolase_peri2 S 91.4 1.3 2.8E-05 37.9 8.4 63 210-282 58-120 (200)
6 cd01834 SGNH_hydrolase_like_2 90.7 1.2 2.5E-05 37.3 7.4 52 211-278 61-112 (191)
7 COG2845 Uncharacterized protei 86.1 4 8.6E-05 39.6 8.3 121 126-280 115-236 (354)
8 cd01841 NnaC_like NnaC (CMP-Ne 64.8 3.2 6.9E-05 34.7 1.1 31 249-281 71-101 (174)
9 cd01825 SGNH_hydrolase_peri1 S 50.1 7.4 0.00016 32.6 0.9 12 129-140 1-12 (189)
10 cd01844 SGNH_hydrolase_like_6 47.4 9.6 0.00021 32.2 1.2 13 129-141 1-13 (177)
11 PF00185 OTCace: Aspartate/orn 47.3 14 0.0003 31.6 2.1 25 126-151 1-25 (158)
12 cd01838 Isoamyl_acetate_hydrol 47.2 8.4 0.00018 32.3 0.8 56 211-281 63-118 (199)
13 cd01835 SGNH_hydrolase_like_3 46.3 9.8 0.00021 32.3 1.1 13 128-140 2-14 (193)
14 cd01832 SGNH_hydrolase_like_1 42.4 11 0.00024 31.6 0.7 29 248-280 87-115 (185)
15 cd01820 PAF_acetylesterase_lik 40.8 10 0.00023 33.1 0.4 16 126-141 31-46 (214)
16 cd01831 Endoglucanase_E_like E 39.6 15 0.00032 30.8 1.1 14 129-142 1-14 (169)
17 cd01827 sialate_O-acetylestera 39.1 15 0.00033 30.9 1.1 53 211-281 67-119 (188)
18 PRK10528 multifunctional acyl- 38.7 16 0.00035 31.5 1.2 15 127-141 10-24 (191)
19 cd01822 Lysophospholipase_L1_l 38.4 15 0.00033 30.3 1.0 47 210-278 63-109 (177)
20 PF12026 DUF3513: Domain of un 37.5 2.3 5E-05 38.7 -4.4 17 125-141 132-148 (210)
21 cd01833 XynB_like SGNH_hydrola 36.6 14 0.0003 30.2 0.5 12 129-140 2-13 (157)
22 PF09949 DUF2183: Uncharacteri 34.3 34 0.00073 27.5 2.3 24 117-140 54-77 (100)
23 PRK14805 ornithine carbamoyltr 32.7 29 0.00062 33.1 2.0 26 124-151 144-169 (302)
24 cd01839 SGNH_arylesterase_like 32.0 23 0.00051 30.5 1.2 32 249-280 101-135 (208)
25 cd04501 SGNH_hydrolase_like_4 31.0 25 0.00054 29.4 1.2 48 211-280 59-106 (183)
26 cd01836 FeeA_FeeB_like SGNH_hy 30.7 25 0.00055 29.6 1.1 31 248-280 86-116 (191)
27 cd01830 XynE_like SGNH_hydrola 29.8 27 0.00058 30.2 1.2 30 248-281 101-130 (204)
28 cd01828 sialate_O-acetylestera 27.7 27 0.00059 28.9 0.8 31 249-281 68-98 (169)
29 PF00702 Hydrolase: haloacid d 26.2 54 0.0012 27.7 2.4 20 119-138 185-206 (215)
30 cd01821 Rhamnogalacturan_acety 25.9 34 0.00074 29.2 1.1 54 210-280 64-117 (198)
31 PRK04284 ornithine carbamoyltr 25.5 51 0.0011 31.8 2.3 26 124-150 152-177 (332)
32 cd04506 SGNH_hydrolase_YpmR_li 24.3 37 0.00081 29.0 1.0 29 248-278 101-129 (204)
33 TIGR01489 DKMTPPase-SF 2,3-dik 22.3 89 0.0019 25.9 3.0 21 119-139 151-174 (188)
34 PLN02342 ornithine carbamoyltr 21.8 68 0.0015 31.3 2.4 26 124-151 191-216 (348)
35 PRK02102 ornithine carbamoyltr 20.9 74 0.0016 30.8 2.4 26 124-150 152-177 (331)
36 cd01840 SGNH_hydrolase_yrhL_li 20.9 71 0.0015 26.3 2.1 20 130-149 2-21 (150)
37 PLN02527 aspartate carbamoyltr 20.8 75 0.0016 30.3 2.4 27 124-150 148-174 (306)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=1.5e-82 Score=610.68 Aligned_cols=227 Identities=56% Similarity=1.091 Sum_probs=215.7
Q ss_pred CCCCCCcCccCceeeCCCCCCC--CCCC-CCCCCcccccCCCCCCccccceeecCCCCCCCCChHHHHHHhcCCcEEEEe
Q 023296 58 LGGGKCNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVG 134 (284)
Q Consensus 58 ~~~~~Cd~~~G~WV~D~~~PlY--~~Cp-~i~~~~nC~~nGRpD~~y~~wrWqP~~C~l~~fd~~~fl~~lrgk~i~FvG 134 (284)
...+.||+|+|+||+|+++||| ++|| ||+++|||++|||||++|++|||||++|+|||||+.+||++||||+|||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 4467899999999999999999 7999 999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHcccCCCceeEEeecCceEEEEEeecCeEEEEEEecceeccccCCCCeeEEeccccCC-CCCCCcc
Q 023296 135 DSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGG-NAWRGMD 213 (284)
Q Consensus 135 DS~~Rn~~~sL~clL~~~~~~~~~~~~~~~~~~~~~f~~yn~tv~f~WsPfLv~~~~~~~~~~L~LD~~~~~-~~w~~~D 213 (284)
|||+|||||||+|||++++|...+.+.++++..+|+|++||+||+||||||||+.+.....++|+||+++.. +.|+++|
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D 207 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD 207 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence 999999999999999999987766666778889999999999999999999999887776789999999865 8899999
Q ss_pred EEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCC
Q 023296 214 MLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYE 284 (284)
Q Consensus 214 vlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~Hfe 284 (284)
||||||||||.|++..++++|++.|+.++++|+..+||++||+||++||++++++.|++|||||+||+|||
T Consensus 208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe 278 (387)
T PLN02629 208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYN 278 (387)
T ss_pred EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCccccc
Confidence 99999999999999889999999999999999999999999999999999999999999999999999997
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=99.97 E-value=7.2e-31 Score=235.28 Aligned_cols=155 Identities=32% Similarity=0.602 Sum_probs=126.5
Q ss_pred CCCCChHHHHHHhcCCcEEEEeccchHHHHHHHHHHHcccCC-----CceeEEeecCceEEEEEeecCeEEEEEEeccee
Q 023296 113 IPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAP-----KTKYSVVRTAVLSSITFQEFGLQILLYRTTYLV 187 (284)
Q Consensus 113 l~~fd~~~fl~~lrgk~i~FvGDS~~Rn~~~sL~clL~~~~~-----~~~~~~~~~~~~~~~~f~~yn~tv~f~WsPfLv 187 (284)
|++||+.++|++||||+|+|||||++||+|++|+|+|.+..+ +......+.+....+.|+++|+||+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998777 222222233566788899999999999999999
Q ss_pred ccccCCCCeeEEeccccCC--CCCC----CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHH
Q 023296 188 DLVREPAGTVLRLDSIKGG--NAWR----GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARW 261 (284)
Q Consensus 188 ~~~~~~~~~~L~LD~~~~~--~~w~----~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~w 261 (284)
+. +|.++.. ..|. .+||||+|+|+||.+.+....+ ++. .+++..++|+..+++++++
T Consensus 81 ~~----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~~ 143 (263)
T PF13839_consen 81 DQ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLADW 143 (263)
T ss_pred cc----------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHHH
Confidence 64 3333311 4454 8999999999999987643333 333 6778899999999999999
Q ss_pred HHhcCCCCC--ceEEEEecCCCCCC
Q 023296 262 VNFNVDPTK--TKVFFQGISPTHYE 284 (284)
Q Consensus 262 v~~~~~~~k--~~vffRT~SP~Hfe 284 (284)
+.+.+++.+ ++||||+++|.||+
T Consensus 144 ~~~~~~~~~~~~~v~~r~~~P~h~~ 168 (263)
T PF13839_consen 144 VRRLLDRSKPPTRVFWRTTSPVHFE 168 (263)
T ss_pred HHhhhccccccceEEEEecCCcccc
Confidence 998887766 99999999999986
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.94 E-value=1e-27 Score=172.39 Aligned_cols=53 Identities=60% Similarity=1.365 Sum_probs=51.1
Q ss_pred CCCCcCccCceeeCCCCCCC--CCCCCCCCCcccccCCCCCCccccceeecCCCC
Q 023296 60 GGKCNIFQGKWVYDASYPLY--SHCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCS 112 (284)
Q Consensus 60 ~~~Cd~~~G~WV~D~~~PlY--~~Cp~i~~~~nC~~nGRpD~~y~~wrWqP~~C~ 112 (284)
+++||+|+|+||+|+++||| ++||||+++|||++|||||++|++|||||++|+
T Consensus 1 e~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 1 EKRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CCccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 36899999999999999999 999999999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.78 E-value=6.6e-05 Score=66.39 Aligned_cols=102 Identities=15% Similarity=0.316 Sum_probs=63.8
Q ss_pred EEEEeccchHHHHHHHHHHHcccCCCceeEEeecCceEEEEEeecCeEEEEEEecceeccccCCCCeeEEeccccCCCCC
Q 023296 130 IMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAW 209 (284)
Q Consensus 130 i~FvGDS~~Rn~~~sL~clL~~~~~~~~~~~~~~~~~~~~~f~~yn~tv~f~WsPfLv~~~~~~~~~~L~LD~~~~~~~w 209 (284)
++|+|||+.|-+|.-|+|+|....--....+...+ ..+|. -|..-.+.+|
T Consensus 2 v~~lgds~~ravykdlv~l~q~~~~l~~~~lr~k~---e~~f~---------------------------~D~ll~gg~~ 51 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQKDSLLSSSQLKAKG---ELSFE---------------------------NDVLLEGGRL 51 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcCCccccHHHHhhhh---hhhhc---------------------------cceeecCCce
Confidence 68999999999999999999832100000000000 01111 0111122333
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
||||||+|.|=.. +|.. ...+-|++-|.+.+.-+.+-+ |.+++++|.|.+|-
T Consensus 52 ---DVIi~Ns~LWDl~--------ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv 103 (183)
T cd01842 52 ---DLVIMNSCLWDLS--------RYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPV 103 (183)
T ss_pred ---eEEEEecceeccc--------ccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCC
Confidence 9999999999652 2211 235789999999988775433 66789999999983
No 5
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=91.39 E-value=1.3 Score=37.93 Aligned_cols=63 Identities=8% Similarity=0.039 Sum_probs=36.5
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTH 282 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~H 282 (284)
..+|+||+..|.+=..... .+..+. ....-.+.++|+..++.+++.+.+ .+.+|++-+..|.+
T Consensus 58 ~~pd~vii~~G~ND~~~~~-~~~~~~-----~~~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~ 120 (200)
T cd01829 58 EKPDVVVVFLGANDRQDIR-DGDGYL-----KFGSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMR 120 (200)
T ss_pred CCCCEEEEEecCCCCcccc-CCCcee-----ecCChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCC
Confidence 4589999999987542110 000010 001112456888888888877642 34578888877754
No 6
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=90.66 E-value=1.2 Score=37.35 Aligned_cols=52 Identities=12% Similarity=0.056 Sum_probs=29.7
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEec
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGI 278 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~ 278 (284)
.+|+|++..|.-=.... +. .....+.|+..|+.+++.+.+. . +...|++-+.
T Consensus 61 ~~d~v~l~~G~ND~~~~------~~--------~~~~~~~~~~~l~~~v~~~~~~-~-~~~~ii~~~p 112 (191)
T cd01834 61 KPDVVSIMFGINDSFRG------FD--------DPVGLEKFKTNLRRLIDRLKNK-E-SAPRIVLVSP 112 (191)
T ss_pred CCCEEEEEeecchHhhc------cc--------ccccHHHHHHHHHHHHHHHHcc-c-CCCcEEEECC
Confidence 48999998876322111 00 1123467888888888887432 2 3345555543
No 7
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.10 E-value=4 Score=39.64 Aligned_cols=121 Identities=14% Similarity=0.175 Sum_probs=67.2
Q ss_pred cCCcEEEEeccchHHHHHHHHHHHcccCCCceeEEeecCceEEEEEeecCeEEEEEEecceeccccCCCCeeEEeccccC
Q 023296 126 RGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKG 205 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn~~~sL~clL~~~~~~~~~~~~~~~~~~~~~f~~yn~tv~f~WsPfLv~~~~~~~~~~L~LD~~~~ 205 (284)
.+++|.|||||+++.+-+.|...|... +..... +..+..+.+..+|| |-|.-=+.+. +
T Consensus 115 ~a~kvLvvGDslm~gla~gl~~al~t~-~~i~i~-~~sn~SSGlvr~dY-----fdWpk~i~~~-------------l-- 172 (354)
T COG2845 115 DADKVLVVGDSLMQGLAEGLDKALATS-PGITIV-TRSNGSSGLVRDDY-----FDWPKAIPEL-------------L-- 172 (354)
T ss_pred CCCEEEEechHHhhhhHHHHHHHhccC-CCcEEE-EeecCCCCcccccc-----cccHHHHHHH-------------H--
Confidence 568899999999999999988877642 222211 11122122222221 2232211111 1
Q ss_pred CCCCCCccEEEEcCcccccccCCCCCceeeecCeeee-ccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 206 GNAWRGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLY-KDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 206 ~~~w~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~-~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
..-..+.+||+.-|. ..+|+++.+++... ..-.....|++=+...++.+ ...+..|+|-++-|
T Consensus 173 -~~~~~~a~vVV~lGa-------ND~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia----~~~~~~V~WvGmP~ 236 (354)
T COG2845 173 -DKHPKPAAVVVMLGA-------NDRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIA----HTHKVPVLWVGMPP 236 (354)
T ss_pred -HhcCCccEEEEEecC-------CCHHhcccCCeeeecCchHHHHHHHHHHHHHHHHh----cccCCcEEEeeCCC
Confidence 111245666666553 13455555443221 23467788988888888775 34577899988866
No 8
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=64.77 E-value=3.2 Score=34.67 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 249 VAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 249 ~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
+.|+..++++++-+.+. ..+.+|++-++.|.
T Consensus 71 ~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~ 101 (174)
T cd01841 71 NQFIKWYRDIIEQIREE--FPNTKIYLLSVLPV 101 (174)
T ss_pred HHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCc
Confidence 45666677776666442 13456777776664
No 9
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=50.05 E-value=7.4 Score=32.61 Aligned_cols=12 Identities=33% Similarity=0.396 Sum_probs=10.5
Q ss_pred cEEEEeccchHH
Q 023296 129 KIMFVGDSLSLN 140 (284)
Q Consensus 129 ~i~FvGDS~~Rn 140 (284)
||+|+|||++-.
T Consensus 1 ~iv~~GDS~t~g 12 (189)
T cd01825 1 RIAQLGDSHIAG 12 (189)
T ss_pred CeeEecCccccc
Confidence 689999999974
No 10
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=47.41 E-value=9.6 Score=32.17 Aligned_cols=13 Identities=31% Similarity=0.450 Sum_probs=11.4
Q ss_pred cEEEEeccchHHH
Q 023296 129 KIMFVGDSLSLNQ 141 (284)
Q Consensus 129 ~i~FvGDS~~Rn~ 141 (284)
||+|+|||++...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 6999999998865
No 11
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=47.25 E-value=14 Score=31.62 Aligned_cols=25 Identities=32% Similarity=0.396 Sum_probs=20.8
Q ss_pred cCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 126 RGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.|++|+|||| ..-|...|++.++..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4889999999 656788999988864
No 12
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=47.16 E-value=8.4 Score=32.31 Aligned_cols=56 Identities=16% Similarity=0.099 Sum_probs=32.9
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
.+|+||+..|.-=.... +.. +..+ .+.|+..++.+++.+.+. ..+.+|++-|..|.
T Consensus 63 ~pd~vii~~G~ND~~~~----------~~~--~~~~-~~~~~~~~~~~i~~~~~~--~~~~~ii~~t~~~~ 118 (199)
T cd01838 63 QPDLVTIFFGANDAALP----------GQP--QHVP-LDEYKENLRKIVSHLKSL--SPKTKVILITPPPV 118 (199)
T ss_pred CceEEEEEecCccccCC----------CCC--Cccc-HHHHHHHHHHHHHHHHhh--CCCCeEEEeCCCCC
Confidence 78999998876322110 000 0112 467888888888777542 13556777777663
No 13
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.30 E-value=9.8 Score=32.33 Aligned_cols=13 Identities=46% Similarity=0.810 Sum_probs=11.6
Q ss_pred CcEEEEeccchHH
Q 023296 128 KKIMFVGDSLSLN 140 (284)
Q Consensus 128 k~i~FvGDS~~Rn 140 (284)
++|+|+|||++..
T Consensus 2 ~~i~~lGDSit~G 14 (193)
T cd01835 2 KRLIVVGDSLVYG 14 (193)
T ss_pred cEEEEEcCccccC
Confidence 6899999999875
No 14
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=42.41 E-value=11 Score=31.59 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
.+.|+..++.+++.+. .+...|++-|..|
T Consensus 87 ~~~~~~~~~~~i~~i~----~~~~~vil~~~~~ 115 (185)
T cd01832 87 PDTYRADLEEAVRRLR----AAGARVVVFTIPD 115 (185)
T ss_pred HHHHHHHHHHHHHHHH----hCCCEEEEecCCC
Confidence 3467777777777764 1234566666544
No 15
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=40.83 E-value=10 Score=33.10 Aligned_cols=16 Identities=31% Similarity=0.706 Sum_probs=13.1
Q ss_pred cCCcEEEEeccchHHH
Q 023296 126 RGKKIMFVGDSLSLNQ 141 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn~ 141 (284)
...+|+|+|||++...
T Consensus 31 ~~~~iv~lGDSit~g~ 46 (214)
T cd01820 31 KEPDVVFIGDSITQNW 46 (214)
T ss_pred CCCCEEEECchHhhhh
Confidence 4457999999999864
No 16
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=39.56 E-value=15 Score=30.75 Aligned_cols=14 Identities=43% Similarity=0.626 Sum_probs=11.2
Q ss_pred cEEEEeccchHHHH
Q 023296 129 KIMFVGDSLSLNQW 142 (284)
Q Consensus 129 ~i~FvGDS~~Rn~~ 142 (284)
+|.|+|||++....
T Consensus 1 ~i~~iGDSit~G~~ 14 (169)
T cd01831 1 KIEFIGDSITCGYG 14 (169)
T ss_pred CEEEEeccccccCc
Confidence 58999999987543
No 17
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=39.09 E-value=15 Score=30.87 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=31.5
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
.+|+||+..|. ... .... -...+.|+..++.+++.+.+. ..+.++++-|..|.
T Consensus 67 ~pd~Vii~~G~---ND~-------~~~~------~~~~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~ 119 (188)
T cd01827 67 NPNIVIIKLGT---NDA-------KPQN------WKYKDDFKKDYETMIDSFQAL--PSKPKIYICYPIPA 119 (188)
T ss_pred CCCEEEEEccc---CCC-------CCCC------CccHHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCcc
Confidence 58999999886 111 1000 012357777888888777542 23557777776663
No 18
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=38.66 E-value=16 Score=31.55 Aligned_cols=15 Identities=33% Similarity=0.594 Sum_probs=12.8
Q ss_pred CCcEEEEeccchHHH
Q 023296 127 GKKIMFVGDSLSLNQ 141 (284)
Q Consensus 127 gk~i~FvGDS~~Rn~ 141 (284)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 678999999998764
No 19
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=38.44 E-value=15 Score=30.29 Aligned_cols=47 Identities=11% Similarity=0.012 Sum_probs=26.4
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEec
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGI 278 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~ 278 (284)
..+|+||+..|.-=.. ...+ .+.|+..++.+++-+.+. ..++++-++
T Consensus 63 ~~pd~v~i~~G~ND~~-----------------~~~~-~~~~~~~l~~li~~~~~~----~~~vil~~~ 109 (177)
T cd01822 63 HKPDLVILELGGNDGL-----------------RGIP-PDQTRANLRQMIETAQAR----GAPVLLVGM 109 (177)
T ss_pred cCCCEEEEeccCcccc-----------------cCCC-HHHHHHHHHHHHHHHHHC----CCeEEEEec
Confidence 3689999998853110 0011 345677777777766432 345665554
No 20
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=37.48 E-value=2.3 Score=38.71 Aligned_cols=17 Identities=29% Similarity=0.706 Sum_probs=14.1
Q ss_pred hcCCcEEEEeccchHHH
Q 023296 125 FRGKKIMFVGDSLSLNQ 141 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn~ 141 (284)
|.+.+++||||++.|+.
T Consensus 132 l~ahkLVfiGDTl~r~~ 148 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCREA 148 (210)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred EEeeeeeeeccHHHHHh
Confidence 67788999999999875
No 21
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.56 E-value=14 Score=30.20 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=10.8
Q ss_pred cEEEEeccchHH
Q 023296 129 KIMFVGDSLSLN 140 (284)
Q Consensus 129 ~i~FvGDS~~Rn 140 (284)
+|+++|||++-.
T Consensus 2 ~~~~~Gds~~~g 13 (157)
T cd01833 2 RIMPLGDSITWG 13 (157)
T ss_pred ceeecCCceeec
Confidence 689999999887
No 22
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=34.32 E-value=34 Score=27.45 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=19.4
Q ss_pred ChHHHHHHhcCCcEEEEeccchHH
Q 023296 117 NGLYFLEKFRGKKIMFVGDSLSLN 140 (284)
Q Consensus 117 d~~~fl~~lrgk~i~FvGDS~~Rn 140 (284)
.-+.+++..-+++.++||||--.-
T Consensus 54 ~i~~i~~~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 54 NIERILRDFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHHHCCCCcEEEEeeCCCcC
Confidence 445677888999999999997664
No 23
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=32.71 E-value=29 Score=33.08 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=21.2
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.+.|++|+||||. .|...|++.++..
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 4689999999994 5688999888753
No 24
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.02 E-value=23 Score=30.50 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCCceEEEEecCC
Q 023296 249 VAFYKGLTTWARWVNFNVD---PTKTKVFFQGISP 280 (284)
Q Consensus 249 ~A~~~al~t~~~wv~~~~~---~~k~~vffRT~SP 280 (284)
+.|+..++.+++-+.+... ...++|++-+..|
T Consensus 101 ~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~ 135 (208)
T cd01839 101 AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPP 135 (208)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCc
Confidence 5677778777777654321 1345566655544
No 25
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=31.04 E-value=25 Score=29.44 Aligned_cols=48 Identities=10% Similarity=0.010 Sum_probs=27.0
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
.+|+||+..|.-=.-. .. ..+.|.+.++..++.+.+ ....+++-+..|
T Consensus 59 ~~d~v~i~~G~ND~~~-----------------~~-~~~~~~~~~~~li~~~~~----~~~~~il~~~~p 106 (183)
T cd04501 59 KPAVVIIMGGTNDIIV-----------------NT-SLEMIKDNIRSMVELAEA----NGIKVILASPLP 106 (183)
T ss_pred CCCEEEEEeccCcccc-----------------CC-CHHHHHHHHHHHHHHHHH----CCCcEEEEeCCC
Confidence 4788888887642100 01 234567777777776633 223456666555
No 26
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.67 E-value=25 Score=29.65 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
.+.|+..++.+++.+.++ ...+.|++-+..|
T Consensus 86 ~~~~~~~l~~li~~i~~~--~~~~~iiv~~~p~ 116 (191)
T cd01836 86 IARWRKQLAELVDALRAK--FPGARVVVTAVPP 116 (191)
T ss_pred HHHHHHHHHHHHHHHHhh--CCCCEEEEECCCC
Confidence 346777777777776542 1345677776654
No 27
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=29.80 E-value=27 Score=30.21 Aligned_cols=30 Identities=20% Similarity=0.173 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
.+.|+..|+.+++.+.++ ..+|++-|+.|.
T Consensus 101 ~~~~~~~l~~ii~~~~~~----~~~vil~t~~P~ 130 (204)
T cd01830 101 AEELIAGYRQLIRRAHAR----GIKVIGATITPF 130 (204)
T ss_pred HHHHHHHHHHHHHHHHHC----CCeEEEecCCCC
Confidence 356777888887776432 356777777764
No 28
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.67 E-value=27 Score=28.88 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 249 VAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 249 ~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
+.|++.++.+++.+.+. ..+.+|++-|..|.
T Consensus 68 ~~~~~~l~~li~~~~~~--~~~~~vi~~~~~p~ 98 (169)
T cd01828 68 EDIVANYRTILEKLRKH--FPNIKIVVQSILPV 98 (169)
T ss_pred HHHHHHHHHHHHHHHHH--CCCCeEEEEecCCc
Confidence 57777787777776542 23456777777664
No 29
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=26.23 E-value=54 Score=27.71 Aligned_cols=20 Identities=20% Similarity=0.537 Sum_probs=15.6
Q ss_pred HHHHHHhc--CCcEEEEeccch
Q 023296 119 LYFLEKFR--GKKIMFVGDSLS 138 (284)
Q Consensus 119 ~~fl~~lr--gk~i~FvGDS~~ 138 (284)
..+++.|+ +..+++|||+++
T Consensus 185 ~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 185 LRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp HHHHHHHTCTGGGEEEEESSGG
T ss_pred HHHHHHHhcCCCEEEEEccCHH
Confidence 46777775 568999999983
No 30
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=25.87 E-value=34 Score=29.19 Aligned_cols=54 Identities=6% Similarity=-0.047 Sum_probs=30.1
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
+.+|+||+..|.-=.... ... ...+ .+.|+..|+++++.+.+. ...+++-|..|
T Consensus 64 ~~pdlVii~~G~ND~~~~---------~~~---~~~~-~~~~~~nl~~ii~~~~~~----~~~~il~tp~~ 117 (198)
T cd01821 64 KPGDYVLIQFGHNDQKPK---------DPE---YTEP-YTTYKEYLRRYIAEARAK----GATPILVTPVT 117 (198)
T ss_pred CCCCEEEEECCCCCCCCC---------CCC---CCCc-HHHHHHHHHHHHHHHHHC----CCeEEEECCcc
Confidence 468999999987432110 000 1112 457888888888776442 34555544433
No 31
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=25.47 E-value=51 Score=31.85 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=21.1
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIH 150 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~ 150 (284)
.+.|++|+||||..+ |...|++-++.
T Consensus 152 ~l~g~kia~vGD~~~-~v~~Sl~~~~~ 177 (332)
T PRK04284 152 PYKDIKFTYVGDGRN-NVANALMQGAA 177 (332)
T ss_pred CcCCcEEEEecCCCc-chHHHHHHHHH
Confidence 367899999999766 58888888775
No 32
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=24.26 E-value=37 Score=28.99 Aligned_cols=29 Identities=10% Similarity=0.219 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEec
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQGI 278 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT~ 278 (284)
.+.|++.|+.+++.+.+. . .+.+|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~-~-p~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL-N-PDAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHH-C-CCCeEEEEec
Confidence 457888888888887542 2 2445555543
No 33
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=22.31 E-value=89 Score=25.90 Aligned_cols=21 Identities=19% Similarity=0.417 Sum_probs=14.2
Q ss_pred HHHHHHh-c--CCcEEEEeccchH
Q 023296 119 LYFLEKF-R--GKKIMFVGDSLSL 139 (284)
Q Consensus 119 ~~fl~~l-r--gk~i~FvGDS~~R 139 (284)
.++++.+ . ...++|||||.+=
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D 174 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTD 174 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcch
Confidence 4445443 3 5689999999763
No 34
>PLN02342 ornithine carbamoyltransferase
Probab=21.83 E-value=68 Score=31.33 Aligned_cols=26 Identities=27% Similarity=0.468 Sum_probs=21.3
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.+.|++|++|||- .|...|++.++..
T Consensus 191 ~l~glkva~vGD~--~nva~Sli~~~~~ 216 (348)
T PLN02342 191 RLEGTKVVYVGDG--NNIVHSWLLLAAV 216 (348)
T ss_pred CcCCCEEEEECCC--chhHHHHHHHHHH
Confidence 4789999999994 3688999888753
No 35
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=20.93 E-value=74 Score=30.81 Aligned_cols=26 Identities=31% Similarity=0.378 Sum_probs=21.1
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIH 150 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~ 150 (284)
.++|++|++|||.-+ |...|++.++.
T Consensus 152 ~l~g~~va~vGd~~~-~v~~Sl~~~~~ 177 (331)
T PRK02102 152 PLKGLKLAYVGDGRN-NMANSLMVGGA 177 (331)
T ss_pred CCCCCEEEEECCCcc-cHHHHHHHHHH
Confidence 468999999999754 48888888775
No 36
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=20.90 E-value=71 Score=26.29 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=14.0
Q ss_pred EEEEeccchHHHHHHHHHHH
Q 023296 130 IMFVGDSLSLNQWQSLACMI 149 (284)
Q Consensus 130 i~FvGDS~~Rn~~~sL~clL 149 (284)
|.|+|||++...-..|...+
T Consensus 2 v~~~GDSv~~~~~~~~~~~~ 21 (150)
T cd01840 2 ITAIGDSVMLDSSPALQEIF 21 (150)
T ss_pred eeEEeehHHHchHHHHHHHC
Confidence 67899999987655544433
No 37
>PLN02527 aspartate carbamoyltransferase
Probab=20.81 E-value=75 Score=30.28 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=21.0
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIH 150 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~ 150 (284)
.+.|++|+||||-.+-+...|++-.+.
T Consensus 148 ~l~g~kva~vGD~~~~rv~~Sl~~~~~ 174 (306)
T PLN02527 148 RLDGIKVGLVGDLANGRTVRSLAYLLA 174 (306)
T ss_pred CcCCCEEEEECCCCCChhHHHHHHHHH
Confidence 368899999999865467888877664
Done!