Query 023296
Match_columns 284
No_of_seqs 198 out of 716
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 04:26:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 85.0 0.92 3.2E-05 37.2 4.5 50 210-281 73-122 (200)
2 4hf7_A Putative acylhydrolase; 73.2 1.2 4E-05 37.3 1.4 15 126-140 25-39 (209)
3 3hp4_A GDSL-esterase; psychrot 71.0 1.3 4.3E-05 35.6 1.1 15 126-140 1-15 (185)
4 3rjt_A Lipolytic protein G-D-S 64.5 2.3 7.9E-05 34.4 1.4 26 248-277 112-137 (216)
5 1ivn_A Thioesterase I; hydrola 57.2 3 0.0001 33.7 0.8 14 127-140 1-14 (190)
6 3mil_A Isoamyl acetate-hydroly 56.0 3.3 0.00011 34.2 0.9 53 210-280 71-123 (240)
7 1yzf_A Lipase/acylhydrolase; s 53.1 3.9 0.00013 32.4 0.8 50 210-281 66-115 (195)
8 2hsj_A Putative platelet activ 50.0 5.8 0.0002 32.3 1.4 52 211-282 85-136 (214)
9 2q0q_A ARYL esterase; SGNH hyd 49.9 4.4 0.00015 33.1 0.7 53 212-280 84-141 (216)
10 3dc7_A Putative uncharacterize 48.1 6.6 0.00023 32.7 1.5 16 125-140 19-34 (232)
11 3dci_A Arylesterase; SGNH_hydr 46.1 5.4 0.00019 33.5 0.7 33 248-280 122-157 (232)
12 1fxw_F Alpha2, platelet-activa 45.8 7.7 0.00026 32.5 1.6 23 119-141 29-53 (229)
13 1vjg_A Putative lipase from th 45.0 4.9 0.00017 33.1 0.2 54 210-281 87-140 (218)
14 3p94_A GDSL-like lipase; serin 43.7 6.8 0.00023 31.5 0.9 30 248-281 96-125 (204)
15 1es9_A PAF-AH, platelet-activa 43.4 8.3 0.00028 32.2 1.4 16 126-141 37-52 (232)
16 3bzw_A Putative lipase; protei 43.1 9 0.00031 33.1 1.6 16 125-140 24-39 (274)
17 4i8i_A Hypothetical protein; 5 39.7 33 0.0011 30.7 4.9 120 128-281 11-142 (271)
18 2vpt_A Lipolytic enzyme; ester 38.9 7.5 0.00026 32.1 0.4 13 128-140 6-18 (215)
19 2waa_A Acetyl esterase, xylan 33.7 13 0.00043 33.9 1.1 48 211-277 225-272 (347)
20 2w9x_A AXE2A, CJCE2B, putative 33.2 15 0.0005 33.8 1.4 28 248-277 266-293 (366)
21 2wao_A Endoglucanase E; plant 31.3 14 0.00046 33.4 0.9 15 126-140 121-135 (341)
22 1k7c_A Rhamnogalacturonan acet 28.1 19 0.00064 30.5 1.1 12 129-140 2-13 (233)
23 1vcc_A DNA topoisomerase I; DN 27.7 8.4 0.00029 28.5 -1.0 15 128-142 55-70 (77)
24 2o14_A Hypothetical protein YX 26.4 24 0.00083 32.6 1.7 15 126-140 161-175 (375)
25 3t6g_B Breast cancer anti-estr 26.4 3 0.0001 37.1 -4.3 17 125-141 144-160 (229)
26 3grf_A Ornithine carbamoyltran 26.2 36 0.0012 31.6 2.8 27 124-151 158-184 (328)
27 3tpf_A Otcase, ornithine carba 26.2 34 0.0012 31.4 2.6 25 125-151 143-168 (307)
28 4h08_A Putative hydrolase; GDS 25.3 1.5E+02 0.0052 23.5 6.2 37 100-150 3-43 (200)
29 3skv_A SSFX3; jelly roll, GDSL 24.7 25 0.00086 33.0 1.4 14 127-140 185-198 (385)
30 3r7f_A Aspartate carbamoyltran 24.3 38 0.0013 31.0 2.6 27 125-151 145-171 (304)
31 4amu_A Ornithine carbamoyltran 24.1 42 0.0014 31.6 2.8 25 125-150 178-202 (365)
32 1pg5_A Aspartate carbamoyltran 21.8 48 0.0017 30.2 2.7 27 125-151 147-173 (299)
33 3csu_A Protein (aspartate carb 21.5 47 0.0016 30.5 2.6 28 124-151 151-178 (310)
34 3sds_A Ornithine carbamoyltran 21.5 45 0.0015 31.2 2.5 24 126-151 187-210 (353)
35 3q98_A Transcarbamylase; rossm 21.0 52 0.0018 31.3 2.8 27 125-151 189-220 (399)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=84.96 E-value=0.92 Score=37.23 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=33.5
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
..+|+||++.|..=.. ...+.|+..|+.+++.+.+. ..+.++++-|..|.
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCC
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCC
Confidence 4589999999864210 11356788888888877543 24567888887773
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=73.17 E-value=1.2 Score=37.27 Aligned_cols=15 Identities=20% Similarity=0.720 Sum_probs=13.0
Q ss_pred cCCcEEEEeccchHH
Q 023296 126 RGKKIMFVGDSLSLN 140 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn 140 (284)
.+++|+|+|||++..
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 467899999999975
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=71.04 E-value=1.3 Score=35.55 Aligned_cols=15 Identities=33% Similarity=0.567 Sum_probs=12.6
Q ss_pred cCCcEEEEeccchHH
Q 023296 126 RGKKIMFVGDSLSLN 140 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn 140 (284)
.|++|+|+|||++..
T Consensus 1 ~~~~i~~~GDSit~G 15 (185)
T 3hp4_A 1 MDNTILILGDXLSAA 15 (185)
T ss_dssp -CEEEEEEECTTTTT
T ss_pred CCCeEEEECCccccc
Confidence 378999999999974
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=64.54 E-value=2.3 Score=34.42 Aligned_cols=26 Identities=8% Similarity=0.097 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQG 277 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT 277 (284)
.+.|+..++.+++.+.+. ..++++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 467888899888888553 45666665
No 5
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=57.15 E-value=3 Score=33.65 Aligned_cols=14 Identities=36% Similarity=0.676 Sum_probs=12.2
Q ss_pred CCcEEEEeccchHH
Q 023296 127 GKKIMFVGDSLSLN 140 (284)
Q Consensus 127 gk~i~FvGDS~~Rn 140 (284)
.|+|+|+|||++..
T Consensus 1 ~~~i~~~GDSit~g 14 (190)
T 1ivn_A 1 ADTLLILGDSLSAG 14 (190)
T ss_dssp CEEEEEEECHHHHC
T ss_pred CCcEEEEecCcccC
Confidence 37899999999975
No 6
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=56.01 E-value=3.3 Score=34.24 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=30.2
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISP 280 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP 280 (284)
..+|+||+..|.==.. ..+ .... ..+.|+..++.+++-+.+. ..+|++-+..|
T Consensus 71 ~~pd~vvi~~G~ND~~----------~~~---~~~~-~~~~~~~~l~~~i~~~~~~----~~~vil~~~~p 123 (240)
T 3mil_A 71 SNIVMATIFLGANDAC----------SAG---PQSV-PLPEFIDNIRQMVSLMKSY----HIRPIIIGPGL 123 (240)
T ss_dssp CCEEEEEEECCTTTTS----------SSS---TTCC-CHHHHHHHHHHHHHHHHHT----TCEEEEECCCC
T ss_pred CCCCEEEEEeecCcCC----------ccC---CCCC-CHHHHHHHHHHHHHHHHHc----CCeEEEEcCCC
Confidence 4689999988862110 000 0011 2356777788877777542 34677777655
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=53.09 E-value=3.9 Score=32.45 Aligned_cols=50 Identities=12% Similarity=0.046 Sum_probs=29.1
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
..+|+||+..|.-=.. ..+ .. ..+.|+..++.+++.+. ..++++-+..|.
T Consensus 66 ~~pd~vvi~~G~ND~~----------~~~-----~~-~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~ 115 (195)
T 1yzf_A 66 EKPDEVVIFFGANDAS----------LDR-----NI-TVATFRENLETMIHEIG------SEKVILITPPYA 115 (195)
T ss_dssp GCCSEEEEECCTTTTC----------TTS-----CC-CHHHHHHHHHHHHHHHC------GGGEEEECCCCC
T ss_pred cCCCEEEEEeeccccC----------ccC-----CC-CHHHHHHHHHHHHHHhc------CCEEEEEcCCCC
Confidence 4589999988862211 000 11 23567777777776662 456777676653
No 8
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=50.02 E-value=5.8 Score=32.34 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=32.6
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCC
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTH 282 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~H 282 (284)
.+|+||+..|.-=. .. + .+ .+.|+..++.+++.+.+.. .+.+|++-+..|..
T Consensus 85 ~pd~vvi~~G~ND~----------~~-~------~~-~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~ 136 (214)
T 2hsj_A 85 AVDKIFLLIGTNDI----------GK-D------VP-VNEALNNLEAIIQSVARDY--PLTEIKLLSILPVN 136 (214)
T ss_dssp CCCEEEEECCHHHH----------HT-T------CC-HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCC
T ss_pred CCCEEEEEEecCcC----------Cc-C------CC-HHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCC
Confidence 57999998886211 10 1 12 3567777888887775542 34578887877753
No 9
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=49.91 E-value=4.4 Score=33.05 Aligned_cols=53 Identities=15% Similarity=0.059 Sum_probs=31.0
Q ss_pred ccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCC-----CCCceEEEEecCC
Q 023296 212 MDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVD-----PTKTKVFFQGISP 280 (284)
Q Consensus 212 ~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~-----~~k~~vffRT~SP 280 (284)
+|+||+..|.-=... . ...+ .+.|+..++.+++.+.+.-. .++.+|++-+..|
T Consensus 84 ~d~vvi~~G~ND~~~----------~-----~~~~-~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 84 LDLVIIMLGTNDTKA----------Y-----FRRT-PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp CSEEEEECCTGGGSG----------G-----GCCC-HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred CCEEEEEecCcccch----------h-----cCCC-HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 499999988632210 0 0112 35788888888888755320 0345677766544
No 10
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=48.10 E-value=6.6 Score=32.67 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.5
Q ss_pred hcCCcEEEEeccchHH
Q 023296 125 FRGKKIMFVGDSLSLN 140 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn 140 (284)
+..++|+|+|||++..
T Consensus 19 ~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 19 VSFKRPAWLGDSITAN 34 (232)
T ss_dssp BCCSSEEEEESTTTST
T ss_pred CCcceEEEEccccccc
Confidence 4568999999999975
No 11
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=46.09 E-value=5.4 Score=33.50 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCC---CCceEEEEecCC
Q 023296 248 LVAFYKGLTTWARWVNFNVDP---TKTKVFFQGISP 280 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~---~k~~vffRT~SP 280 (284)
.+.|+..|+.+++.+.+.... .+.+|++-+..|
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 457888888888888653210 356777766544
No 12
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=45.81 E-value=7.7 Score=32.45 Aligned_cols=23 Identities=26% Similarity=0.417 Sum_probs=16.8
Q ss_pred HHHHHHh--cCCcEEEEeccchHHH
Q 023296 119 LYFLEKF--RGKKIMFVGDSLSLNQ 141 (284)
Q Consensus 119 ~~fl~~l--rgk~i~FvGDS~~Rn~ 141 (284)
..|.+.. .+.+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 3454443 5678999999999864
No 13
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=45.04 E-value=4.9 Score=33.14 Aligned_cols=54 Identities=11% Similarity=0.000 Sum_probs=32.9
Q ss_pred CCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 210 RGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 210 ~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
..+|+||+..|.==... ..+ ....+ .+.|+..++.+++.+.+. .+|++-+..|.
T Consensus 87 ~~pd~vvi~~G~ND~~~---------~~~---~~~~~-~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 87 EYNSLVVFSFGLNDTTL---------ENG---KPRVS-IAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp TSEEEEEEECCHHHHCE---------ETT---EESSC-HHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCCEEEEEecCCcchh---------hcc---cccCC-HHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 46899999998621100 000 01122 457888888888887654 46777777664
No 14
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=43.74 E-value=6.8 Score=31.48 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPT 281 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT~SP~ 281 (284)
.+.|+..++.+++.+.+ ...+|++-|..|.
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~ 125 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPA 125 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCC
Confidence 35677777777777643 2456777776664
No 15
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=43.45 E-value=8.3 Score=32.18 Aligned_cols=16 Identities=31% Similarity=0.588 Sum_probs=13.9
Q ss_pred cCCcEEEEeccchHHH
Q 023296 126 RGKKIMFVGDSLSLNQ 141 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn~ 141 (284)
...+|+|+|||++...
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5678999999999984
No 16
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=43.05 E-value=9 Score=33.11 Aligned_cols=16 Identities=38% Similarity=0.808 Sum_probs=13.1
Q ss_pred hcCCcEEEEeccchHH
Q 023296 125 FRGKKIMFVGDSLSLN 140 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn 140 (284)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 3567999999999864
No 17
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=39.71 E-value=33 Score=30.70 Aligned_cols=120 Identities=8% Similarity=0.029 Sum_probs=62.1
Q ss_pred CcEEEEeccchHHHHHHHHHHHcccCCCceeEEeecCceEEEEEeecCeEEEEEEecceecccc------CCCCee----
Q 023296 128 KKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVR------EPAGTV---- 197 (284)
Q Consensus 128 k~i~FvGDS~~Rn~~~sL~clL~~~~~~~~~~~~~~~~~~~~~f~~yn~tv~f~WsPfLv~~~~------~~~~~~---- 197 (284)
.||.|||-|++-|-+..++.-|..+.. .+. ..-...--|.+++.+|.+....... ...|..
T Consensus 11 ~rVL~IGNS~t~n~~p~~l~~la~a~g-~~~--------~v~~~~igG~~L~~H~~~~~~~~~~~~y~k~~~~g~~~~~~ 81 (271)
T 4i8i_A 11 IKVLAIGNSFSQDAVEQYLHELGEAEG-ITM--------IIGNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTETR 81 (271)
T ss_dssp EEEEEEESHHHHHHHSSSHHHHHHTTT-CEE--------EEEEEECTTCCHHHHHHHHHTTCCCEEEEEECTTSCEEEEE
T ss_pred eEEEEECCCCCcCcHHHHHHHHHHhcC-Cce--------EEEEEecCCccHHHHHhccccccccccccccccCCcccccc
Confidence 489999999997766444444443321 111 1111122467777777765322000 000100
Q ss_pred -EEec-cccCCCCCCCccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEE
Q 023296 198 -LRLD-SIKGGNAWRGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFF 275 (284)
Q Consensus 198 -L~LD-~~~~~~~w~~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vff 275 (284)
..+. .+. -+..|+||+--+.--. +..+.|+..++.+++.+.+...+.-..+|+
T Consensus 82 ~~~~~~~L~----~~~wD~VilQe~S~~~---------------------~~~~~~~~~~~~l~~~ir~~~~p~ak~il~ 136 (271)
T 4i8i_A 82 SMTIEKALA----DEKWDYISVQQASPLS---------------------GIYDSYKASLPELVNYIRERIGKETVLMMH 136 (271)
T ss_dssp EECHHHHHH----HSCCSEEEECCCGGGT---------------------TCHHHHHHHHHHHHHHHHTTSCTTCEEEEE
T ss_pred chhHHHHhh----cCCCCEEEeCCCCCCC---------------------CCHHHHHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 0000 010 1457888886533111 124678888999999886644233345788
Q ss_pred EecCCC
Q 023296 276 QGISPT 281 (284)
Q Consensus 276 RT~SP~ 281 (284)
.|.+-.
T Consensus 137 ~TWa~~ 142 (271)
T 4i8i_A 137 QTWAYA 142 (271)
T ss_dssp ECCCCC
T ss_pred eccCCC
Confidence 887643
No 18
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=38.85 E-value=7.5 Score=32.13 Aligned_cols=13 Identities=54% Similarity=0.516 Sum_probs=11.4
Q ss_pred CcEEEEeccchHH
Q 023296 128 KKIMFVGDSLSLN 140 (284)
Q Consensus 128 k~i~FvGDS~~Rn 140 (284)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4799999999975
No 19
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=33.72 E-value=13 Score=33.89 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=28.3
Q ss_pred CccEEEEcCcccccccCCCCCceeeecCeeeeccCCHHHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 023296 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQG 277 (284)
Q Consensus 211 ~~DvlV~ntGhWw~~~~~~~~~~y~~~g~~~~~~~~~~~A~~~al~t~~~wv~~~~~~~k~~vffRT 277 (284)
.+|+||++.|.= . .. ......+.|+.+++.+++-+.+.. .+++|++-+
T Consensus 225 ~Pd~VvI~lG~N---D-------~~-------~~~~~~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGTN---D-------FS-------PGIPDRATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCHH---H-------HS-------SSCCCHHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred CCCEEEEEcccc---C-------CC-------CCCCcHHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 689999999851 1 00 001223567778888777775532 345666654
No 20
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=33.20 E-value=15 Score=33.76 Aligned_cols=28 Identities=4% Similarity=0.185 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEe
Q 023296 248 LVAFYKGLTTWARWVNFNVDPTKTKVFFQG 277 (284)
Q Consensus 248 ~~A~~~al~t~~~wv~~~~~~~k~~vffRT 277 (284)
.+.|+..++.+++-+.+.- .+.+|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN--ARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 4578888888888875532 345666655
No 21
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=31.29 E-value=14 Score=33.44 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.6
Q ss_pred cCCcEEEEeccchHH
Q 023296 126 RGKKIMFVGDSLSLN 140 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn 140 (284)
..++|+|+|||++-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 457899999999864
No 22
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=28.12 E-value=19 Score=30.49 Aligned_cols=12 Identities=25% Similarity=0.432 Sum_probs=10.9
Q ss_pred cEEEEeccchHH
Q 023296 129 KIMFVGDSLSLN 140 (284)
Q Consensus 129 ~i~FvGDS~~Rn 140 (284)
+|+|+|||++..
T Consensus 2 ~I~~~GDS~t~g 13 (233)
T 1k7c_A 2 TVYLAGDSTMAK 13 (233)
T ss_dssp EEEEECCTTTST
T ss_pred EEEEEecCCCcC
Confidence 699999999986
No 23
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=27.74 E-value=8.4 Score=28.45 Aligned_cols=15 Identities=40% Similarity=0.782 Sum_probs=11.1
Q ss_pred CcEEEEe-ccchHHHH
Q 023296 128 KKIMFVG-DSLSLNQW 142 (284)
Q Consensus 128 k~i~FvG-DS~~Rn~~ 142 (284)
.+++||| ||-+|-||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 4689999 77777654
No 24
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=26.44 E-value=24 Score=32.61 Aligned_cols=15 Identities=33% Similarity=0.381 Sum_probs=13.2
Q ss_pred cCCcEEEEeccchHH
Q 023296 126 RGKKIMFVGDSLSLN 140 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn 140 (284)
.+++|+|+|||++..
T Consensus 161 ~~~~Iv~lGDSiT~G 175 (375)
T 2o14_A 161 TNRTIYVGGDSTVCN 175 (375)
T ss_dssp CCCEEEEEECTTTSC
T ss_pred CCcEEEEecCccccC
Confidence 567999999999987
No 25
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=26.41 E-value=3 Score=37.13 Aligned_cols=17 Identities=35% Similarity=0.743 Sum_probs=13.9
Q ss_pred hcCCcEEEEeccchHHH
Q 023296 125 FRGKKIMFVGDSLSLNQ 141 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn~ 141 (284)
|.+.+++||||.+.|+.
T Consensus 144 lsAHKLVfIGDTL~r~~ 160 (229)
T 3t6g_B 144 LSAHKLVFIGDTLSRQA 160 (229)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred EEeeeeeeecchHHHhh
Confidence 45678899999999864
No 26
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=26.24 E-value=36 Score=31.56 Aligned_cols=27 Identities=30% Similarity=0.373 Sum_probs=22.5
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.+.|++|++|||-.+ |.-.|++..+..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 478999999999866 688999888753
No 27
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=26.23 E-value=34 Score=31.39 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=20.4
Q ss_pred hc-CCcEEEEeccchHHHHHHHHHHHcc
Q 023296 125 FR-GKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 125 lr-gk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
+. |++|+|||| . -|.-.|++..+..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 56 999999999 3 4688899888753
No 28
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=25.26 E-value=1.5e+02 Score=23.47 Aligned_cols=37 Identities=16% Similarity=0.609 Sum_probs=24.8
Q ss_pred ccccc--eeecC--CCCCCCCChHHHHHHhcCCcEEEEeccchHHHHHHHHHHHc
Q 023296 100 IYLKY--RWQPF--SCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIH 150 (284)
Q Consensus 100 ~y~~w--rWqP~--~C~l~~fd~~~fl~~lrgk~i~FvGDS~~Rn~~~sL~clL~ 150 (284)
+|..| .|.|. .-++| ||+|+|||++..-...|...|.
T Consensus 3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l~ 43 (200)
T 4h08_A 3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAALK 43 (200)
T ss_dssp SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHTT
T ss_pred ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHhc
Confidence 57777 48774 33343 6999999999875445555553
No 29
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=24.74 E-value=25 Score=32.97 Aligned_cols=14 Identities=21% Similarity=0.318 Sum_probs=11.8
Q ss_pred CCcEEEEeccchHH
Q 023296 127 GKKIMFVGDSLSLN 140 (284)
Q Consensus 127 gk~i~FvGDS~~Rn 140 (284)
.++|+|+|||++..
T Consensus 185 ~~~Iv~~GDSiT~G 198 (385)
T 3skv_A 185 KPHWIHYGDSICHG 198 (385)
T ss_dssp CCEEEEEECSSCTT
T ss_pred CceEEEEeccccCC
Confidence 68899999999743
No 30
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=24.33 E-value=38 Score=31.04 Aligned_cols=27 Identities=22% Similarity=0.240 Sum_probs=21.8
Q ss_pred hcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
++|++|+||||-..-|.-.|++..+..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 689999999997656788888877753
No 31
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=24.11 E-value=42 Score=31.65 Aligned_cols=25 Identities=32% Similarity=0.351 Sum_probs=21.2
Q ss_pred hcCCcEEEEeccchHHHHHHHHHHHc
Q 023296 125 FRGKKIMFVGDSLSLNQWQSLACMIH 150 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn~~~sL~clL~ 150 (284)
++|++|+||||-.+ |.-.|++..+.
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~ 202 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAA 202 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHH
Confidence 68999999999766 58889988875
No 32
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=21.76 E-value=48 Score=30.22 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=22.3
Q ss_pred hcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 125 FRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 125 lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
++|++|++|||-..-|...|++..+..
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 689999999997655688999888764
No 33
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=21.48 E-value=47 Score=30.48 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=22.5
Q ss_pred HhcCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 124 KFRGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 124 ~lrgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.+.|++|++|||-..-|...|++..+..
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 3688999999996655688999888754
No 34
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=21.46 E-value=45 Score=31.22 Aligned_cols=24 Identities=38% Similarity=0.430 Sum_probs=20.2
Q ss_pred cCCcEEEEeccchHHHHHHHHHHHcc
Q 023296 126 RGKKIMFVGDSLSLNQWQSLACMIHS 151 (284)
Q Consensus 126 rgk~i~FvGDS~~Rn~~~sL~clL~~ 151 (284)
.|++|++|||-. |...|++..+..
T Consensus 187 ~glkva~vGD~~--nva~Sl~~~l~~ 210 (353)
T 3sds_A 187 EGLKIAWVGDAN--NVLFDLAIAATK 210 (353)
T ss_dssp TTCEEEEESCCC--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHH
Confidence 799999999973 688899888753
No 35
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=20.98 E-value=52 Score=31.32 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=20.2
Q ss_pred hcCCcEEEEecc---chH--HHHHHHHHHHcc
Q 023296 125 FRGKKIMFVGDS---LSL--NQWQSLACMIHS 151 (284)
Q Consensus 125 lrgk~i~FvGDS---~~R--n~~~sL~clL~~ 151 (284)
|+|++|++|||= .+| |.-.|++..+..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 568899999983 344 778898887753
Done!