Query 023299
Match_columns 284
No_of_seqs 163 out of 2676
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 02:59:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023299.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023299hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13604 luxD acyl transferase 100.0 2.8E-28 6E-33 204.7 19.1 231 36-273 8-249 (307)
2 PHA02857 monoglyceride lipase; 99.9 3.5E-25 7.5E-30 188.0 17.3 224 42-269 5-251 (276)
3 PLN02385 hydrolase; alpha/beta 99.9 2.3E-24 5E-29 189.0 18.7 239 33-274 57-329 (349)
4 PLN02298 hydrolase, alpha/beta 99.9 3.2E-24 7E-29 186.8 18.1 238 35-274 30-301 (330)
5 PRK10749 lysophospholipase L2; 99.9 6.3E-23 1.4E-27 178.6 18.6 228 37-269 30-307 (330)
6 PLN02511 hydrolase 99.9 5.5E-22 1.2E-26 175.8 22.0 258 16-275 43-348 (388)
7 KOG4391 Predicted alpha/beta h 99.9 4E-23 8.6E-28 160.8 11.7 209 34-269 51-264 (300)
8 KOG1552 Predicted alpha/beta h 99.9 8.8E-23 1.9E-27 164.2 12.8 199 36-269 34-234 (258)
9 PRK03592 haloalkane dehalogena 99.9 4.1E-22 9E-27 170.8 16.7 219 45-276 14-279 (295)
10 KOG1455 Lysophospholipase [Lip 99.9 1E-22 2.2E-27 167.0 12.0 233 36-270 26-290 (313)
11 PRK00870 haloalkane dehalogena 99.9 1.8E-21 3.9E-26 167.4 18.9 231 38-276 22-291 (302)
12 COG1647 Esterase/lipase [Gener 99.9 5.6E-22 1.2E-26 155.2 12.8 195 65-268 14-223 (243)
13 PLN02652 hydrolase; alpha/beta 99.9 4.8E-21 1E-25 169.5 19.9 229 37-269 110-367 (395)
14 PRK10985 putative hydrolase; P 99.9 1E-20 2.2E-25 164.3 21.6 226 41-269 35-296 (324)
15 PLN02824 hydrolase, alpha/beta 99.9 2.9E-21 6.4E-26 165.5 18.0 222 46-276 16-284 (294)
16 COG2267 PldB Lysophospholipase 99.9 7.9E-22 1.7E-26 168.2 13.3 228 38-269 10-272 (298)
17 TIGR02240 PHA_depoly_arom poly 99.9 5.3E-22 1.2E-26 168.5 12.1 220 45-276 9-256 (276)
18 PRK05077 frsA fermentation/res 99.9 1E-20 2.2E-25 168.7 18.9 223 33-272 164-398 (414)
19 PLN03087 BODYGUARD 1 domain co 99.9 6.7E-21 1.5E-25 171.0 17.3 229 42-277 180-470 (481)
20 PRK03204 haloalkane dehalogena 99.9 1.2E-20 2.6E-25 161.0 17.3 114 45-169 21-135 (286)
21 TIGR03343 biphenyl_bphD 2-hydr 99.9 8.1E-21 1.7E-25 161.5 16.1 203 65-276 29-273 (282)
22 PRK10349 carboxylesterase BioH 99.9 9.5E-21 2E-25 159.0 15.2 202 66-277 13-247 (256)
23 KOG4409 Predicted hydrolase/ac 99.9 1.6E-20 3.5E-25 156.9 15.0 130 33-169 63-194 (365)
24 PF12697 Abhydrolase_6: Alpha/ 99.9 3.1E-21 6.6E-26 157.3 9.8 204 69-275 1-225 (228)
25 PLN02965 Probable pheophorbida 99.9 3.2E-21 7E-26 161.9 10.1 205 68-277 5-244 (255)
26 TIGR03100 hydr1_PEP hydrolase, 99.8 1.9E-19 4.2E-24 152.6 20.2 225 38-269 3-255 (274)
27 TIGR03101 hydr2_PEP hydrolase, 99.8 8.3E-20 1.8E-24 152.6 17.3 137 40-181 3-145 (266)
28 PRK10566 esterase; Provisional 99.8 7.5E-20 1.6E-24 153.0 16.8 207 50-270 12-234 (249)
29 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.1E-20 4.5E-25 154.9 13.1 205 65-276 12-243 (251)
30 PRK10673 acyl-CoA esterase; Pr 99.8 5.4E-20 1.2E-24 154.1 14.8 206 63-275 13-244 (255)
31 PRK06489 hypothetical protein; 99.8 1.5E-19 3.4E-24 159.1 17.9 135 35-169 34-188 (360)
32 TIGR01250 pro_imino_pep_2 prol 99.8 1.8E-19 3.9E-24 152.6 17.6 122 45-171 9-132 (288)
33 PLN02679 hydrolase, alpha/beta 99.8 8.7E-20 1.9E-24 160.6 16.1 118 46-170 69-191 (360)
34 TIGR03056 bchO_mg_che_rel puta 99.8 4.4E-20 9.4E-25 156.3 13.4 221 44-276 12-270 (278)
35 TIGR01607 PST-A Plasmodium sub 99.8 1.1E-19 2.4E-24 158.1 15.7 223 42-269 2-313 (332)
36 PLN02578 hydrolase 99.8 2E-19 4.4E-24 158.0 15.8 112 45-169 73-186 (354)
37 TIGR03611 RutD pyrimidine util 99.8 1E-19 2.2E-24 151.8 13.3 206 65-276 12-248 (257)
38 TIGR03695 menH_SHCHC 2-succiny 99.8 9.8E-20 2.1E-24 150.6 12.7 104 66-171 1-106 (251)
39 PRK07581 hypothetical protein; 99.8 2.4E-19 5.3E-24 156.7 15.6 122 46-170 24-159 (339)
40 PRK11126 2-succinyl-6-hydroxy- 99.8 1.6E-19 3.6E-24 150.0 13.8 99 66-170 2-102 (242)
41 TIGR01738 bioH putative pimelo 99.8 1.9E-19 4E-24 148.8 13.1 200 66-277 4-239 (245)
42 PLN02894 hydrolase, alpha/beta 99.8 7.6E-19 1.7E-23 156.4 17.2 105 64-169 103-210 (402)
43 KOG1454 Predicted hydrolase/ac 99.8 8.8E-20 1.9E-24 157.2 10.6 235 40-277 28-315 (326)
44 KOG4178 Soluble epoxide hydrol 99.8 1.1E-19 2.4E-24 151.4 10.4 122 39-170 23-148 (322)
45 COG1506 DAP2 Dipeptidyl aminop 99.8 4.2E-19 9E-24 166.1 14.6 228 33-275 361-602 (620)
46 TIGR01249 pro_imino_pep_1 prol 99.8 9.1E-19 2E-23 150.9 15.5 122 41-170 8-130 (306)
47 PF12695 Abhydrolase_5: Alpha/ 99.8 2.7E-19 5.9E-24 136.9 10.2 144 68-268 1-145 (145)
48 PLN03084 alpha/beta hydrolase 99.8 3.1E-18 6.6E-23 150.8 17.6 119 45-170 112-232 (383)
49 KOG4667 Predicted esterase [Li 99.8 7.8E-19 1.7E-23 136.8 11.6 222 35-270 8-241 (269)
50 PLN02211 methyl indole-3-aceta 99.8 2.9E-19 6.2E-24 151.4 9.6 116 45-169 4-121 (273)
51 PRK14875 acetoin dehydrogenase 99.8 1.5E-18 3.2E-23 153.5 14.5 205 64-276 129-361 (371)
52 PRK08775 homoserine O-acetyltr 99.8 4E-19 8.6E-24 155.5 9.2 220 45-277 43-330 (343)
53 TIGR01392 homoserO_Ac_trn homo 99.8 8E-18 1.7E-22 147.8 14.9 124 45-171 13-163 (351)
54 KOG2564 Predicted acetyltransf 99.8 1.2E-17 2.7E-22 135.1 14.1 128 36-169 49-181 (343)
55 KOG1838 Alpha/beta hydrolase [ 99.7 2.2E-16 4.7E-21 136.1 19.6 252 14-267 63-362 (409)
56 PLN02872 triacylglycerol lipas 99.7 7E-18 1.5E-22 148.9 10.4 139 30-171 37-198 (395)
57 PRK00175 metX homoserine O-ace 99.7 4.1E-17 8.9E-22 144.6 14.4 123 46-171 31-183 (379)
58 COG2945 Predicted hydrolase of 99.7 3E-17 6.5E-22 126.1 11.2 181 37-270 4-190 (210)
59 PRK11071 esterase YqiA; Provis 99.7 4.4E-17 9.6E-22 130.4 12.5 170 67-272 2-177 (190)
60 PLN02980 2-oxoglutarate decarb 99.7 1.6E-16 3.4E-21 161.9 18.5 105 65-170 1370-1480(1655)
61 COG0429 Predicted hydrolase of 99.7 6.9E-16 1.5E-20 128.7 17.4 229 33-267 47-314 (345)
62 PF05448 AXE1: Acetyl xylan es 99.7 2.6E-16 5.7E-21 135.2 15.2 219 33-269 52-304 (320)
63 TIGR00976 /NonD putative hydro 99.7 3.6E-16 7.9E-21 144.8 14.0 129 43-174 2-136 (550)
64 PRK05855 short chain dehydroge 99.7 9.5E-16 2.1E-20 143.2 16.6 104 43-157 8-115 (582)
65 PF01738 DLH: Dienelactone hyd 99.7 1.5E-15 3.3E-20 124.4 14.3 177 50-273 1-194 (218)
66 PF02273 Acyl_transf_2: Acyl t 99.7 1.5E-15 3.4E-20 120.9 13.3 225 39-270 4-239 (294)
67 TIGR01840 esterase_phb esteras 99.7 2E-15 4.4E-20 123.2 14.2 116 53-170 2-130 (212)
68 PLN00021 chlorophyllase 99.7 1.8E-15 3.8E-20 129.9 13.8 180 47-269 36-241 (313)
69 PLN02442 S-formylglutathione h 99.7 3E-15 6.5E-20 127.4 15.0 207 45-270 27-264 (283)
70 TIGR01836 PHA_synth_III_C poly 99.7 2.1E-15 4.4E-20 132.5 13.8 120 46-172 46-173 (350)
71 TIGR02821 fghA_ester_D S-formy 99.6 1.5E-14 3.2E-19 122.8 18.3 206 45-270 22-258 (275)
72 PRK10115 protease 2; Provision 99.6 6E-15 1.3E-19 139.2 17.1 225 33-269 412-654 (686)
73 PRK10162 acetyl esterase; Prov 99.6 6.3E-15 1.4E-19 127.5 15.7 216 35-269 55-291 (318)
74 COG3458 Acetyl esterase (deace 99.6 1.6E-14 3.4E-19 116.8 14.7 219 35-268 54-300 (321)
75 TIGR01838 PHA_synth_I poly(R)- 99.6 2.7E-14 5.8E-19 129.9 17.5 225 49-278 173-467 (532)
76 PF00326 Peptidase_S9: Prolyl 99.6 7.3E-16 1.6E-20 125.9 4.4 172 82-273 3-193 (213)
77 KOG2382 Predicted alpha/beta h 99.6 2.6E-14 5.6E-19 119.5 12.9 211 64-276 50-303 (315)
78 PRK11460 putative hydrolase; P 99.6 1.3E-14 2.8E-19 120.0 10.7 162 63-272 13-196 (232)
79 PF06342 DUF1057: Alpha/beta h 99.6 2.3E-13 5.1E-18 111.5 17.4 131 36-169 5-136 (297)
80 PF02129 Peptidase_S15: X-Pro 99.6 4.2E-14 9.1E-19 119.8 12.6 124 46-171 1-137 (272)
81 COG0412 Dienelactone hydrolase 99.6 8.6E-14 1.9E-18 114.8 14.0 187 38-273 3-207 (236)
82 PRK06765 homoserine O-acetyltr 99.6 3.5E-14 7.6E-19 125.5 12.3 121 47-170 40-196 (389)
83 PF12715 Abhydrolase_7: Abhydr 99.5 2.8E-13 6.2E-18 116.0 15.4 142 32-175 83-265 (390)
84 KOG2984 Predicted hydrolase [G 99.5 4.2E-14 9.1E-19 109.5 9.2 212 46-269 29-257 (277)
85 PF00561 Abhydrolase_1: alpha/ 99.5 3E-14 6.5E-19 116.8 8.3 174 94-269 1-216 (230)
86 PF06500 DUF1100: Alpha/beta h 99.5 1.1E-13 2.4E-18 120.4 10.4 130 34-169 162-295 (411)
87 KOG2281 Dipeptidyl aminopeptid 99.4 7E-13 1.5E-17 118.4 11.3 221 38-275 614-853 (867)
88 PF12146 Hydrolase_4: Putative 99.4 5.6E-13 1.2E-17 90.4 8.3 76 47-126 1-78 (79)
89 TIGR03230 lipo_lipase lipoprot 99.4 1.7E-12 3.7E-17 115.1 12.5 107 64-170 39-154 (442)
90 KOG2624 Triglyceride lipase-ch 99.4 1.8E-12 3.9E-17 113.5 10.9 140 30-173 41-202 (403)
91 PRK07868 acyl-CoA synthetase; 99.4 4.2E-12 9E-17 125.4 14.2 118 50-171 49-178 (994)
92 cd00707 Pancreat_lipase_like P 99.4 1.4E-12 3.1E-17 110.3 9.3 107 64-170 34-147 (275)
93 KOG1515 Arylacetamide deacetyl 99.4 2.7E-12 5.9E-17 110.1 10.7 218 46-269 70-311 (336)
94 KOG2100 Dipeptidyl aminopeptid 99.4 7.7E-12 1.7E-16 118.8 13.1 206 46-273 506-731 (755)
95 PF07859 Abhydrolase_3: alpha/ 99.4 1.5E-12 3.2E-17 106.0 7.1 187 69-269 1-209 (211)
96 KOG1553 Predicted alpha/beta h 99.4 1.3E-11 2.7E-16 103.2 12.4 132 38-173 215-348 (517)
97 PF08538 DUF1749: Protein of u 99.3 6.4E-12 1.4E-16 105.2 9.7 203 65-273 32-286 (303)
98 COG0657 Aes Esterase/lipase [L 99.3 1.3E-11 2.7E-16 106.8 11.3 212 43-269 57-288 (312)
99 TIGR03502 lipase_Pla1_cef extr 99.3 2E-11 4.4E-16 114.7 12.0 111 65-175 448-606 (792)
100 PF02230 Abhydrolase_2: Phosph 99.3 1E-11 2.2E-16 101.7 7.9 166 63-270 11-201 (216)
101 COG4757 Predicted alpha/beta h 99.3 8.4E-11 1.8E-15 93.3 12.0 222 40-269 8-263 (281)
102 COG2936 Predicted acyl esteras 99.3 3.5E-11 7.6E-16 108.4 11.1 135 35-172 17-161 (563)
103 PF12740 Chlorophyllase2: Chlo 99.2 1.4E-10 3E-15 95.5 12.3 110 52-170 6-131 (259)
104 PF10503 Esterase_phd: Esteras 99.2 1.8E-10 4E-15 93.4 12.3 119 50-169 1-131 (220)
105 COG0596 MhpC Predicted hydrola 99.1 4.6E-10 9.9E-15 92.6 11.1 100 66-170 21-123 (282)
106 KOG4627 Kynurenine formamidase 99.1 1.1E-10 2.3E-15 91.0 5.9 202 30-268 37-247 (270)
107 PF06821 Ser_hydrolase: Serine 99.1 1.2E-10 2.6E-15 91.3 6.1 148 69-269 1-154 (171)
108 PF05677 DUF818: Chlamydia CHL 99.1 3.9E-09 8.4E-14 89.0 15.2 138 36-179 111-264 (365)
109 PF07224 Chlorophyllase: Chlor 99.1 8.2E-10 1.8E-14 89.5 10.5 116 48-172 31-159 (307)
110 COG0400 Predicted esterase [Ge 99.1 2.5E-10 5.5E-15 91.6 7.5 164 62-272 14-193 (207)
111 COG3571 Predicted hydrolase of 99.1 1.2E-09 2.6E-14 82.0 10.3 164 64-269 12-182 (213)
112 TIGR01839 PHA_synth_II poly(R) 99.1 1.3E-09 2.7E-14 98.8 12.3 120 49-173 200-331 (560)
113 PRK05371 x-prolyl-dipeptidyl a 99.1 1.1E-09 2.4E-14 104.6 12.3 93 84-176 270-379 (767)
114 COG3208 GrsT Predicted thioest 99.1 4E-09 8.6E-14 85.1 12.7 186 64-269 5-217 (244)
115 PF07819 PGAP1: PGAP1-like pro 99.1 1.9E-09 4.2E-14 88.4 11.1 103 65-170 3-123 (225)
116 COG2021 MET2 Homoserine acetyl 99.0 2.6E-09 5.7E-14 91.1 11.7 121 46-169 34-181 (368)
117 PF10230 DUF2305: Uncharacteri 99.0 4.7E-09 1E-13 88.4 13.1 104 66-169 2-121 (266)
118 PF05728 UPF0227: Uncharacteri 99.0 6E-09 1.3E-13 82.7 11.2 167 69-271 2-174 (187)
119 COG3509 LpqC Poly(3-hydroxybut 99.0 7.8E-09 1.7E-13 85.4 11.7 130 38-170 36-179 (312)
120 COG4099 Predicted peptidase [G 98.9 8.8E-09 1.9E-13 84.9 9.5 123 45-171 169-305 (387)
121 PF00975 Thioesterase: Thioest 98.9 1.2E-08 2.6E-13 84.1 9.7 98 67-169 1-103 (229)
122 TIGR01849 PHB_depoly_PhaZ poly 98.9 1.1E-07 2.4E-12 83.8 15.7 135 30-172 68-210 (406)
123 PF03096 Ndr: Ndr family; Int 98.9 6.2E-08 1.3E-12 80.7 13.3 134 41-180 3-147 (283)
124 KOG2565 Predicted hydrolases o 98.9 3.4E-08 7.4E-13 83.8 11.3 120 45-166 131-260 (469)
125 KOG3043 Predicted hydrolase re 98.8 1.5E-08 3.3E-13 80.3 8.4 154 67-269 40-210 (242)
126 KOG2931 Differentiation-relate 98.8 5.7E-07 1.2E-11 74.3 17.5 127 38-170 23-157 (326)
127 PF03403 PAF-AH_p_II: Platelet 98.8 8.7E-09 1.9E-13 90.9 7.3 107 64-170 98-262 (379)
128 PF00756 Esterase: Putative es 98.8 1.8E-08 3.8E-13 84.3 8.7 127 46-172 4-152 (251)
129 PF08840 BAAT_C: BAAT / Acyl-C 98.8 1.6E-10 3.5E-15 94.1 -4.3 153 119-273 3-167 (213)
130 PF06057 VirJ: Bacterial virul 98.8 2E-08 4.3E-13 78.5 7.4 101 66-170 2-107 (192)
131 PF01674 Lipase_2: Lipase (cla 98.8 5.8E-09 1.3E-13 84.6 4.2 90 67-157 2-96 (219)
132 PF09752 DUF2048: Uncharacteri 98.8 1.9E-07 4.1E-12 79.7 13.4 118 49-168 76-208 (348)
133 COG4188 Predicted dienelactone 98.7 8.3E-08 1.8E-12 82.2 10.3 123 37-159 38-182 (365)
134 COG2272 PnbA Carboxylesterase 98.7 4E-08 8.6E-13 86.9 8.2 124 43-171 75-218 (491)
135 cd00312 Esterase_lipase Estera 98.7 5.1E-08 1.1E-12 89.7 8.9 117 50-169 79-212 (493)
136 KOG2237 Predicted serine prote 98.7 4.1E-08 9E-13 88.6 7.8 143 33-175 437-589 (712)
137 PF05990 DUF900: Alpha/beta hy 98.7 3E-07 6.4E-12 75.9 12.2 111 64-174 16-141 (233)
138 PF06028 DUF915: Alpha/beta hy 98.7 5.6E-08 1.2E-12 80.8 7.8 107 65-171 10-144 (255)
139 PF00135 COesterase: Carboxyle 98.7 6.7E-08 1.5E-12 89.6 8.7 119 50-168 109-243 (535)
140 PLN02733 phosphatidylcholine-s 98.7 6E-08 1.3E-12 86.8 7.9 92 77-170 105-201 (440)
141 PRK10439 enterobactin/ferric e 98.7 8.8E-07 1.9E-11 79.1 14.6 122 46-169 190-322 (411)
142 COG3545 Predicted esterase of 98.6 3.5E-07 7.5E-12 70.2 8.0 152 67-269 3-157 (181)
143 KOG3847 Phospholipase A2 (plat 98.5 1.9E-07 4E-12 77.7 6.7 107 63-169 115-274 (399)
144 PF10340 DUF2424: Protein of u 98.5 9.1E-07 2E-11 76.8 10.6 106 64-173 120-238 (374)
145 KOG3975 Uncharacterized conser 98.5 1.5E-05 3.3E-10 64.5 16.5 207 63-269 26-284 (301)
146 COG3319 Thioesterase domains o 98.5 6.2E-07 1.3E-11 74.4 9.0 99 67-171 1-104 (257)
147 PTZ00472 serine carboxypeptida 98.5 2.2E-06 4.8E-11 77.8 13.0 125 46-173 59-219 (462)
148 PF12048 DUF3530: Protein of u 98.5 3.5E-06 7.5E-11 72.5 13.0 132 38-173 62-232 (310)
149 PF00151 Lipase: Lipase; Inte 98.5 1.9E-07 4.1E-12 80.9 4.9 105 63-170 68-187 (331)
150 COG4814 Uncharacterized protei 98.5 1E-06 2.3E-11 71.3 8.7 106 66-171 45-177 (288)
151 PRK04940 hypothetical protein; 98.4 2.9E-06 6.2E-11 66.3 10.7 106 136-271 60-165 (180)
152 COG1770 PtrB Protease II [Amin 98.4 1.7E-06 3.7E-11 78.9 10.5 144 33-176 415-568 (682)
153 COG4782 Uncharacterized protei 98.4 3.2E-06 6.9E-11 72.2 11.2 111 64-178 114-242 (377)
154 COG1505 Serine proteases of th 98.4 9.3E-07 2E-11 79.7 7.5 220 33-272 390-628 (648)
155 COG3243 PhaC Poly(3-hydroxyalk 98.4 4.8E-06 1E-10 72.5 11.1 113 54-171 97-218 (445)
156 PRK10252 entF enterobactin syn 98.3 4.2E-06 9.2E-11 85.7 11.5 99 65-169 1067-1170(1296)
157 PF05057 DUF676: Putative seri 98.3 2.7E-06 5.9E-11 69.5 7.3 90 65-155 3-97 (217)
158 PF03959 FSH1: Serine hydrolas 98.2 4E-07 8.6E-12 74.2 1.8 163 65-269 3-202 (212)
159 KOG3101 Esterase D [General fu 98.2 6E-06 1.3E-10 65.1 6.9 127 46-172 24-178 (283)
160 COG1075 LipA Predicted acetylt 98.1 1E-05 2.2E-10 70.6 8.4 106 66-176 59-170 (336)
161 PF03583 LIP: Secretory lipase 98.0 4.2E-05 9.2E-10 65.3 9.9 90 84-177 17-120 (290)
162 KOG4840 Predicted hydrolases o 98.0 0.00052 1.1E-08 54.9 14.8 103 65-173 35-147 (299)
163 smart00824 PKS_TE Thioesterase 97.9 8.1E-05 1.7E-09 59.8 9.0 87 77-169 10-101 (212)
164 KOG2112 Lysophospholipase [Lip 97.9 6.1E-05 1.3E-09 59.6 7.4 162 66-269 3-189 (206)
165 KOG2551 Phospholipase/carboxyh 97.9 0.00012 2.7E-09 58.4 8.9 159 65-269 4-203 (230)
166 PF04083 Abhydro_lipase: Parti 97.8 4.7E-05 1E-09 48.8 5.2 51 31-82 6-59 (63)
167 KOG3253 Predicted alpha/beta h 97.8 3.3E-05 7.2E-10 69.8 5.7 164 65-273 175-350 (784)
168 PF05577 Peptidase_S28: Serine 97.8 0.00047 1E-08 62.5 12.5 104 66-170 29-148 (434)
169 KOG1516 Carboxylesterase and r 97.7 9.1E-05 2E-09 69.1 6.7 118 50-169 97-231 (545)
170 COG2819 Predicted hydrolase of 97.7 0.0017 3.6E-08 53.8 12.9 38 136-173 137-175 (264)
171 PF00450 Peptidase_S10: Serine 97.6 0.0012 2.6E-08 59.3 12.7 135 41-177 17-188 (415)
172 KOG3724 Negative regulator of 97.6 0.00025 5.3E-09 66.3 7.6 96 65-167 88-217 (973)
173 COG3150 Predicted esterase [Ge 97.5 0.00052 1.1E-08 52.4 7.4 93 69-174 2-95 (191)
174 PF11144 DUF2920: Protein of u 97.5 0.002 4.4E-08 56.5 12.0 123 46-171 18-220 (403)
175 COG2382 Fes Enterochelin ester 97.5 0.00033 7.1E-09 58.8 6.5 121 48-171 80-213 (299)
176 PLN03016 sinapoylglucose-malat 97.5 0.0022 4.7E-08 57.9 12.2 126 46-173 48-213 (433)
177 KOG3967 Uncharacterized conser 97.5 0.0027 5.9E-08 50.5 10.9 131 35-167 72-224 (297)
178 KOG2541 Palmitoyl protein thio 97.4 0.0017 3.6E-08 53.5 9.7 97 67-168 24-126 (296)
179 PLN02209 serine carboxypeptida 97.4 0.0071 1.5E-07 54.6 14.5 133 40-174 44-216 (437)
180 COG3946 VirJ Type IV secretory 97.4 0.0011 2.3E-08 57.7 8.3 104 48-158 245-348 (456)
181 PF05705 DUF829: Eukaryotic pr 97.3 0.0071 1.5E-07 50.2 13.1 194 69-267 2-221 (240)
182 PLN02606 palmitoyl-protein thi 97.3 0.002 4.4E-08 54.5 9.6 96 66-168 26-130 (306)
183 PF02450 LCAT: Lecithin:choles 97.3 0.0011 2.3E-08 59.2 7.7 82 81-170 66-160 (389)
184 PF10142 PhoPQ_related: PhoPQ- 97.2 0.00064 1.4E-08 59.5 5.9 134 134-275 170-310 (367)
185 PF02089 Palm_thioest: Palmito 97.2 0.00042 9.2E-09 58.0 4.6 101 65-168 4-114 (279)
186 COG0627 Predicted esterase [Ge 97.2 0.0014 3E-08 56.4 7.5 111 63-173 51-190 (316)
187 PLN02517 phosphatidylcholine-s 97.0 0.0012 2.6E-08 60.6 5.4 84 81-169 157-262 (642)
188 PLN02633 palmitoyl protein thi 97.0 0.009 2E-07 50.7 9.9 98 66-168 25-129 (314)
189 KOG2183 Prolylcarboxypeptidase 97.0 0.0048 1E-07 54.0 8.3 103 66-168 80-201 (492)
190 cd00741 Lipase Lipase. Lipase 96.9 0.0018 3.9E-08 49.8 5.3 51 119-169 11-66 (153)
191 PF01764 Lipase_3: Lipase (cla 96.9 0.0016 3.5E-08 49.0 5.0 51 120-170 48-106 (140)
192 PF07082 DUF1350: Protein of u 96.9 0.0088 1.9E-07 49.1 9.2 100 65-168 16-123 (250)
193 PF04301 DUF452: Protein of un 96.7 0.002 4.3E-08 52.0 3.9 78 65-168 10-88 (213)
194 KOG4388 Hormone-sensitive lipa 96.7 0.0035 7.6E-08 57.0 5.7 99 64-168 394-506 (880)
195 cd00519 Lipase_3 Lipase (class 96.6 0.0065 1.4E-07 50.0 6.7 53 119-171 111-169 (229)
196 KOG1282 Serine carboxypeptidas 96.6 0.033 7.2E-07 50.2 11.4 130 40-172 49-215 (454)
197 COG1073 Hydrolases of the alph 96.6 0.0013 2.8E-08 55.7 2.4 214 48-270 31-276 (299)
198 TIGR03712 acc_sec_asp2 accesso 96.4 0.048 1E-06 49.0 11.0 123 43-178 271-398 (511)
199 PF11339 DUF3141: Protein of u 96.4 0.035 7.5E-07 50.3 10.0 75 85-168 93-173 (581)
200 KOG2369 Lecithin:cholesterol a 96.3 0.0068 1.5E-07 54.0 5.2 76 80-159 124-205 (473)
201 PLN02454 triacylglycerol lipas 96.3 0.017 3.6E-07 51.3 7.3 53 119-171 209-272 (414)
202 KOG4372 Predicted alpha/beta h 96.3 0.011 2.4E-07 51.7 6.1 90 63-156 77-170 (405)
203 PF01083 Cutinase: Cutinase; 96.2 0.025 5.4E-07 44.7 7.3 76 93-170 39-122 (179)
204 PF11187 DUF2974: Protein of u 96.1 0.013 2.9E-07 47.9 5.8 49 120-169 69-122 (224)
205 KOG2182 Hydrolytic enzymes of 95.9 0.082 1.8E-06 47.6 9.8 134 43-177 64-218 (514)
206 KOG1551 Uncharacterized conser 95.8 0.034 7.5E-07 45.9 6.7 95 65-159 112-218 (371)
207 KOG4389 Acetylcholinesterase/B 95.8 0.013 2.7E-07 52.5 4.2 115 50-169 121-254 (601)
208 PF11288 DUF3089: Protein of u 95.6 0.021 4.5E-07 45.9 4.7 65 93-157 45-116 (207)
209 PF07519 Tannase: Tannase and 95.6 0.19 4.1E-06 46.1 11.4 125 47-177 14-157 (474)
210 PLN00413 triacylglycerol lipas 95.5 0.022 4.7E-07 51.2 4.6 35 121-155 269-303 (479)
211 PLN02571 triacylglycerol lipas 95.4 0.023 5E-07 50.4 4.5 37 120-156 208-246 (413)
212 PLN02162 triacylglycerol lipas 95.3 0.026 5.7E-07 50.6 4.7 35 121-155 263-297 (475)
213 PF06259 Abhydrolase_8: Alpha/ 95.3 0.52 1.1E-05 37.0 11.4 50 119-168 91-142 (177)
214 PLN02934 triacylglycerol lipas 95.3 0.025 5.5E-07 51.2 4.5 36 120-155 305-340 (515)
215 PLN02408 phospholipase A1 95.2 0.028 6.1E-07 49.2 4.6 37 120-156 182-220 (365)
216 PLN02324 triacylglycerol lipas 94.8 0.043 9.2E-07 48.7 4.4 37 119-155 196-234 (415)
217 PLN02310 triacylglycerol lipas 94.7 0.041 9E-07 48.7 4.1 37 120-156 189-229 (405)
218 COG2939 Carboxypeptidase C (ca 94.7 0.13 2.9E-06 46.4 7.3 94 63-156 98-218 (498)
219 PLN02753 triacylglycerol lipas 94.3 0.061 1.3E-06 49.0 4.5 37 119-155 290-331 (531)
220 PLN02802 triacylglycerol lipas 94.3 0.066 1.4E-06 48.6 4.5 37 120-156 312-350 (509)
221 PLN02719 triacylglycerol lipas 94.1 0.07 1.5E-06 48.5 4.5 37 119-155 276-317 (518)
222 PLN02761 lipase class 3 family 94.1 0.071 1.5E-06 48.6 4.5 37 119-155 271-313 (527)
223 PLN03037 lipase class 3 family 94.1 0.059 1.3E-06 49.0 3.9 36 121-156 299-338 (525)
224 KOG1202 Animal-type fatty acid 94.0 0.38 8.3E-06 48.1 9.2 97 64-172 2121-2221(2376)
225 COG4287 PqaA PhoPQ-activated p 93.9 0.14 3.1E-06 44.4 5.6 138 133-271 231-373 (507)
226 PF05576 Peptidase_S37: PS-10 93.8 0.15 3.3E-06 45.0 5.8 102 64-168 61-168 (448)
227 PLN02847 triacylglycerol lipas 93.6 0.1 2.3E-06 48.2 4.5 33 124-156 239-271 (633)
228 KOG4569 Predicted lipase [Lipi 93.5 0.098 2.1E-06 45.7 4.2 37 120-156 155-191 (336)
229 PF06441 EHN: Epoxide hydrolas 93.4 0.17 3.7E-06 36.6 4.6 36 46-85 76-111 (112)
230 PLN02213 sinapoylglucose-malat 93.3 0.4 8.7E-06 41.6 7.7 78 95-172 3-98 (319)
231 KOG4540 Putative lipase essent 93.2 0.2 4.4E-06 41.9 5.2 49 119-168 259-307 (425)
232 COG5153 CVT17 Putative lipase 93.2 0.2 4.4E-06 41.9 5.2 49 119-168 259-307 (425)
233 COG4947 Uncharacterized protei 92.6 0.4 8.8E-06 37.1 5.7 55 122-176 87-142 (227)
234 PF09994 DUF2235: Uncharacteri 92.3 1 2.3E-05 38.2 8.6 38 119-156 74-112 (277)
235 PF05277 DUF726: Protein of un 90.6 0.62 1.4E-05 40.7 5.6 38 134-171 218-261 (345)
236 PF08237 PE-PPE: PE-PPE domain 89.3 1.8 4E-05 35.5 7.1 22 135-156 47-68 (225)
237 COG3673 Uncharacterized conser 87.2 5.3 0.00011 34.4 8.5 92 64-155 29-141 (423)
238 COG4822 CbiK Cobalamin biosynt 87.1 4 8.7E-05 32.9 7.4 63 63-141 135-199 (265)
239 PF03283 PAE: Pectinacetyleste 85.1 8.6 0.00019 34.0 9.4 37 119-155 137-175 (361)
240 COG1073 Hydrolases of the alph 82.1 0.1 2.2E-06 44.0 -3.9 108 65-172 87-201 (299)
241 COG2830 Uncharacterized protei 79.7 2.6 5.6E-05 32.4 3.5 76 66-167 11-87 (214)
242 KOG2521 Uncharacterized conser 73.4 21 0.00045 31.4 7.8 89 64-154 36-127 (350)
243 PF06309 Torsin: Torsin; Inte 71.0 7.7 0.00017 28.6 4.0 31 63-93 49-81 (127)
244 KOG2385 Uncharacterized conser 70.2 10 0.00022 34.8 5.3 42 133-174 444-491 (633)
245 PF09949 DUF2183: Uncharacteri 67.5 41 0.00088 23.7 8.9 82 81-164 12-96 (100)
246 KOG1283 Serine carboxypeptidas 65.5 93 0.002 27.1 10.6 131 46-178 12-174 (414)
247 KOG1752 Glutaredoxin and relat 65.4 45 0.00097 23.7 6.8 78 65-157 13-90 (104)
248 PF11713 Peptidase_C80: Peptid 64.2 4 8.7E-05 31.4 1.4 50 99-148 59-116 (157)
249 KOG2029 Uncharacterized conser 64.0 8.9 0.00019 35.9 3.7 33 122-154 510-544 (697)
250 COG0529 CysC Adenylylsulfate k 62.6 20 0.00044 28.3 4.9 38 64-101 20-59 (197)
251 PF08386 Abhydrolase_4: TAP-li 62.0 2.4 5.1E-05 30.1 -0.2 43 227-270 34-76 (103)
252 PF06792 UPF0261: Uncharacteri 58.0 1.4E+02 0.0031 26.8 10.4 92 68-159 3-118 (403)
253 COG3727 Vsr DNA G:T-mismatch r 55.0 23 0.00051 26.2 3.9 35 65-99 56-114 (150)
254 cd07198 Patatin Patatin-like p 53.0 28 0.0006 27.0 4.5 35 123-158 14-48 (172)
255 TIGR03709 PPK2_rel_1 polyphosp 52.6 22 0.00047 30.0 4.0 72 65-150 54-128 (264)
256 PF10081 Abhydrolase_9: Alpha/ 50.9 82 0.0018 26.8 7.0 35 136-170 109-147 (289)
257 COG3946 VirJ Type IV secretory 50.3 58 0.0013 29.3 6.3 105 63-167 45-154 (456)
258 COG0596 MhpC Predicted hydrola 50.1 4 8.6E-05 32.6 -0.8 56 221-276 215-272 (282)
259 PTZ00062 glutaredoxin; Provisi 49.9 1E+02 0.0023 24.8 7.4 82 65-161 112-195 (204)
260 COG4553 DepA Poly-beta-hydroxy 49.1 1.8E+02 0.0038 25.2 10.5 104 63-171 100-210 (415)
261 TIGR03707 PPK2_P_aer polyphosp 49.0 25 0.00055 28.9 3.8 71 65-149 29-102 (230)
262 PRK10279 hypothetical protein; 48.6 30 0.00064 29.8 4.3 35 122-157 20-54 (300)
263 PF00326 Peptidase_S9: Prolyl 47.6 48 0.001 26.4 5.3 63 65-133 143-210 (213)
264 cd07207 Pat_ExoU_VipD_like Exo 46.8 39 0.00086 26.5 4.6 35 123-158 15-49 (194)
265 TIGR02873 spore_ylxY probable 46.7 29 0.00062 29.4 3.9 35 66-100 230-264 (268)
266 cd07225 Pat_PNPLA6_PNPLA7 Pata 46.4 37 0.0008 29.3 4.6 36 122-158 30-65 (306)
267 KOG1202 Animal-type fatty acid 46.2 14 0.0003 37.8 2.1 82 63-148 496-594 (2376)
268 smart00827 PKS_AT Acyl transfe 46.2 29 0.00062 29.5 3.9 25 132-156 78-102 (298)
269 cd07210 Pat_hypo_W_succinogene 45.9 45 0.00098 27.2 4.8 35 123-158 16-50 (221)
270 PF12242 Eno-Rase_NADH_b: NAD( 45.9 47 0.001 22.1 3.9 39 119-157 20-61 (78)
271 TIGR02764 spore_ybaN_pdaB poly 44.9 23 0.00049 28.0 2.9 34 67-100 152-188 (191)
272 TIGR00128 fabD malonyl CoA-acy 44.4 31 0.00068 29.1 3.9 28 129-156 76-103 (290)
273 PRK10824 glutaredoxin-4; Provi 44.2 1.2E+02 0.0026 21.9 7.4 79 65-158 14-94 (115)
274 TIGR02884 spore_pdaA delta-lac 42.9 36 0.00078 27.8 3.8 35 66-100 186-221 (224)
275 TIGR00365 monothiol glutaredox 42.9 1.1E+02 0.0024 21.1 7.1 79 65-158 11-91 (97)
276 TIGR00632 vsr DNA mismatch end 42.7 69 0.0015 23.3 4.8 13 87-99 101-113 (117)
277 cd07227 Pat_Fungal_NTE1 Fungal 40.9 47 0.001 28.1 4.3 34 123-157 26-59 (269)
278 PF01583 APS_kinase: Adenylyls 40.9 57 0.0012 25.1 4.4 37 66-102 1-39 (156)
279 PF00698 Acyl_transf_1: Acyl t 40.8 23 0.0005 30.6 2.5 29 127-156 76-104 (318)
280 PRK12467 peptide synthase; Pro 40.6 1.2E+02 0.0026 36.2 8.6 86 66-156 3692-3777(3956)
281 TIGR03131 malonate_mdcH malona 40.5 42 0.00092 28.5 4.1 24 133-156 73-96 (295)
282 PF03853 YjeF_N: YjeF-related 39.6 46 0.00099 25.8 3.8 36 65-100 24-59 (169)
283 PF14253 AbiH: Bacteriophage a 39.3 21 0.00045 29.9 2.0 20 134-153 233-252 (270)
284 cd07209 Pat_hypo_Ecoli_Z1214_l 38.7 58 0.0013 26.3 4.4 35 123-158 14-48 (215)
285 cd07224 Pat_like Patatin-like 38.3 61 0.0013 26.7 4.5 35 123-158 15-51 (233)
286 COG1506 DAP2 Dipeptidyl aminop 37.5 1.2E+02 0.0026 29.1 6.9 64 64-133 549-617 (620)
287 PF03976 PPK2: Polyphosphate k 37.4 18 0.0004 29.7 1.3 73 65-151 29-104 (228)
288 cd07228 Pat_NTE_like_bacteria 36.9 80 0.0017 24.4 4.9 35 123-158 16-50 (175)
289 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.5 82 0.0018 24.3 4.8 34 123-157 16-49 (175)
290 COG3494 Uncharacterized protei 36.0 1.1E+02 0.0024 25.6 5.4 57 84-143 19-77 (279)
291 COG1087 GalE UDP-glucose 4-epi 35.9 2.1E+02 0.0045 24.8 7.2 96 70-168 3-118 (329)
292 PRK02399 hypothetical protein; 35.7 3.4E+02 0.0073 24.6 10.3 90 70-159 6-120 (406)
293 PF13207 AAA_17: AAA domain; P 35.0 39 0.00084 24.0 2.6 31 69-101 1-32 (121)
294 PF04084 ORC2: Origin recognit 34.1 3.2E+02 0.0069 23.9 9.3 100 68-167 55-176 (326)
295 COG0331 FabD (acyl-carrier-pro 34.1 51 0.0011 28.6 3.5 30 126-155 74-104 (310)
296 PF06850 PHB_depo_C: PHB de-po 34.0 20 0.00043 28.6 0.9 41 227-267 134-178 (202)
297 cd01523 RHOD_Lact_B Member of 33.4 80 0.0017 21.6 3.9 34 64-103 60-93 (100)
298 COG1752 RssA Predicted esteras 33.0 59 0.0013 27.9 3.8 33 124-157 28-60 (306)
299 PF10686 DUF2493: Protein of u 32.9 68 0.0015 20.9 3.2 31 66-98 31-62 (71)
300 KOG0781 Signal recognition par 32.6 1.4E+02 0.0031 27.6 6.0 86 70-166 442-538 (587)
301 cd07212 Pat_PNPLA9 Patatin-lik 32.4 72 0.0016 27.6 4.2 19 139-157 35-53 (312)
302 KOG2872 Uroporphyrinogen decar 32.0 58 0.0013 27.8 3.3 31 65-102 251-281 (359)
303 COG1856 Uncharacterized homolo 32.0 1.9E+02 0.004 23.9 6.0 93 68-166 89-186 (275)
304 cd07230 Pat_TGL4-5_like Triacy 31.6 72 0.0016 29.0 4.2 36 122-158 88-123 (421)
305 KOG1532 GTPase XAB1, interacts 31.4 3.4E+02 0.0074 23.4 9.1 105 63-168 15-158 (366)
306 PF09419 PGP_phosphatase: Mito 31.2 1.6E+02 0.0034 23.0 5.5 54 88-146 35-88 (168)
307 PF01656 CbiA: CobQ/CobB/MinD/ 30.6 71 0.0015 24.8 3.7 33 70-102 2-36 (195)
308 COG0386 BtuE Glutathione perox 30.0 1.4E+02 0.0031 22.9 4.8 84 41-143 9-102 (162)
309 TIGR02816 pfaB_fam PfaB family 29.9 66 0.0014 30.3 3.7 27 131-157 260-286 (538)
310 cd07208 Pat_hypo_Ecoli_yjju_li 29.1 94 0.002 26.0 4.3 35 123-158 14-49 (266)
311 KOG2170 ATPase of the AAA+ sup 28.6 93 0.002 26.9 4.0 31 63-93 106-138 (344)
312 TIGR03708 poly_P_AMP_trns poly 28.3 1E+02 0.0022 28.6 4.6 73 64-150 37-112 (493)
313 KOG1200 Mitochondrial/plastidi 28.2 3.3E+02 0.0071 22.2 6.9 64 69-134 16-89 (256)
314 cd03028 GRX_PICOT_like Glutare 27.4 2E+02 0.0043 19.4 8.1 76 65-155 7-84 (90)
315 cd00382 beta_CA Carbonic anhyd 27.4 73 0.0016 23.1 2.9 31 121-151 44-74 (119)
316 cd03818 GT1_ExpC_like This fam 27.4 1.4E+02 0.0031 26.4 5.4 38 69-108 2-39 (396)
317 cd01714 ETF_beta The electron 27.3 2.7E+02 0.0059 22.2 6.5 39 119-158 93-135 (202)
318 cd01521 RHOD_PspE2 Member of t 27.3 1.8E+02 0.0038 20.3 4.9 34 64-99 63-96 (110)
319 cd00883 beta_CA_cladeA Carboni 26.7 73 0.0016 25.1 3.0 34 121-154 66-99 (182)
320 PRK06731 flhF flagellar biosyn 26.6 4E+02 0.0086 22.6 8.7 63 93-166 154-219 (270)
321 cd07232 Pat_PLPL Patain-like p 26.5 99 0.0022 27.9 4.2 36 122-158 82-117 (407)
322 COG2326 Uncharacterized conser 26.4 2.2E+02 0.0049 23.9 5.8 39 64-102 71-111 (270)
323 COG0607 PspE Rhodanese-related 26.4 1.1E+02 0.0025 21.0 3.8 34 64-102 60-93 (110)
324 PF05673 DUF815: Protein of un 26.2 2.4E+02 0.0053 23.6 6.0 33 69-101 54-88 (249)
325 cd07229 Pat_TGL3_like Triacylg 25.8 1.1E+02 0.0024 27.5 4.2 35 123-158 99-133 (391)
326 cd07204 Pat_PNPLA_like Patatin 25.4 1.3E+02 0.0029 24.8 4.5 35 123-158 15-53 (243)
327 COG0299 PurN Folate-dependent 25.4 3.6E+02 0.0078 21.7 7.0 77 67-143 2-88 (200)
328 cd01520 RHOD_YbbB Member of th 25.4 1.5E+02 0.0032 21.5 4.4 33 64-100 85-118 (128)
329 cd07231 Pat_SDP1-like Sugar-De 25.4 1.2E+02 0.0026 26.4 4.2 33 123-156 84-116 (323)
330 PF03033 Glyco_transf_28: Glyc 25.4 70 0.0015 23.3 2.6 35 68-102 1-35 (139)
331 PLN03006 carbonate dehydratase 25.3 73 0.0016 27.4 2.9 32 122-153 158-189 (301)
332 TIGR03127 RuMP_HxlB 6-phospho 25.1 3.1E+02 0.0067 21.1 6.4 80 69-150 32-114 (179)
333 cd01518 RHOD_YceA Member of th 25.1 91 0.002 21.4 3.0 32 64-99 60-92 (101)
334 cd07206 Pat_TGL3-4-5_SDP1 Tria 25.0 1.2E+02 0.0026 26.1 4.2 35 122-157 84-118 (298)
335 cd07222 Pat_PNPLA4 Patatin-lik 24.9 1.1E+02 0.0024 25.4 4.0 32 123-155 15-50 (246)
336 PRK05282 (alpha)-aspartyl dipe 24.7 3.2E+02 0.007 22.5 6.5 37 66-102 31-70 (233)
337 cd07220 Pat_PNPLA2 Patatin-lik 24.5 1.4E+02 0.003 25.0 4.4 37 122-158 19-58 (249)
338 TIGR00689 rpiB_lacA_lacB sugar 24.2 3.2E+02 0.007 20.7 7.4 73 83-169 14-88 (144)
339 PLN03050 pyridoxine (pyridoxam 24.1 1.6E+02 0.0034 24.6 4.6 34 67-100 61-94 (246)
340 PRK06398 aldose dehydrogenase; 23.9 4.1E+02 0.0088 21.7 7.9 51 84-134 21-71 (258)
341 PHA02519 plasmid partition pro 23.7 2.5E+02 0.0055 25.1 6.2 41 67-107 107-150 (387)
342 PF00484 Pro_CA: Carbonic anhy 23.5 2E+02 0.0043 21.6 4.9 34 120-153 39-72 (153)
343 TIGR03282 methan_mark_13 putat 23.0 1.9E+02 0.0041 25.5 4.9 74 66-150 18-91 (352)
344 PRK11460 putative hydrolase; P 23.0 4.1E+02 0.0089 21.5 7.0 58 65-133 147-209 (232)
345 COG0400 Predicted esterase [Ge 22.8 4.1E+02 0.0089 21.4 7.7 58 63-131 143-204 (207)
346 PF02230 Abhydrolase_2: Phosph 22.8 2.9E+02 0.0063 22.0 6.0 40 66-105 155-197 (216)
347 PRK05481 lipoyl synthase; Prov 22.7 2.3E+02 0.005 24.2 5.5 56 78-145 178-235 (289)
348 PRK12828 short chain dehydroge 22.5 3.4E+02 0.0073 21.5 6.5 31 69-101 9-39 (239)
349 cd07218 Pat_iPLA2 Calcium-inde 22.5 1.5E+02 0.0033 24.6 4.3 36 123-158 16-52 (245)
350 cd01819 Patatin_and_cPLA2 Pata 22.1 1.4E+02 0.0029 22.7 3.7 32 123-154 14-46 (155)
351 PF13728 TraF: F plasmid trans 22.0 2.3E+02 0.005 23.0 5.2 43 65-107 121-164 (215)
352 PRK14581 hmsF outer membrane N 22.0 2.3E+02 0.005 27.6 5.8 37 64-100 46-92 (672)
353 PLN00416 carbonate dehydratase 22.0 98 0.0021 26.0 3.0 34 121-154 125-158 (258)
354 COG3933 Transcriptional antite 21.8 6.3E+02 0.014 23.2 8.8 77 64-155 107-184 (470)
355 COG0541 Ffh Signal recognition 21.8 5E+02 0.011 23.8 7.5 68 88-166 177-247 (451)
356 cd00884 beta_CA_cladeB Carboni 21.8 1E+02 0.0022 24.6 3.0 34 121-154 72-105 (190)
357 PF08484 Methyltransf_14: C-me 21.7 2.8E+02 0.0061 21.3 5.4 46 122-169 57-103 (160)
358 COG0218 Predicted GTPase [Gene 21.7 1.3E+02 0.0029 24.1 3.6 16 96-111 72-87 (200)
359 PRK08762 molybdopterin biosynt 21.7 5.6E+02 0.012 22.7 8.0 33 134-168 134-167 (376)
360 cd03413 CbiK_C Anaerobic cobal 21.7 2.9E+02 0.0064 19.3 7.1 59 67-141 2-62 (103)
361 PF01118 Semialdhyde_dh: Semia 21.6 80 0.0017 22.7 2.2 31 137-167 1-32 (121)
362 TIGR03708 poly_P_AMP_trns poly 21.6 1.2E+02 0.0026 28.2 3.7 72 64-149 296-370 (493)
363 cd06292 PBP1_LacI_like_10 Liga 21.4 4.5E+02 0.0097 21.4 8.1 74 68-144 58-131 (273)
364 COG1089 Gmd GDP-D-mannose dehy 21.4 2.8E+02 0.0061 24.0 5.5 34 69-104 4-37 (345)
365 COG3887 Predicted signaling pr 21.2 1.7E+02 0.0037 27.8 4.6 48 119-168 323-376 (655)
366 PRK00889 adenylylsulfate kinas 21.2 2.3E+02 0.0051 21.6 5.0 36 66-101 3-40 (175)
367 PLN02564 6-phosphofructokinase 21.2 6.8E+02 0.015 23.3 10.7 96 69-165 179-282 (484)
368 PF01734 Patatin: Patatin-like 21.1 86 0.0019 23.9 2.5 21 137-157 28-48 (204)
369 TIGR03371 cellulose_yhjQ cellu 21.1 1.8E+02 0.004 23.6 4.6 38 68-105 3-42 (246)
370 COG0505 CarA Carbamoylphosphat 20.9 5.3E+02 0.011 22.9 7.2 71 83-154 191-267 (368)
371 cd03379 beta_CA_cladeD Carboni 20.6 1.2E+02 0.0025 22.8 3.0 29 121-149 41-69 (142)
372 PRK14974 cell division protein 20.4 5.9E+02 0.013 22.4 7.8 65 91-166 220-287 (336)
373 KOG4127 Renal dipeptidase [Pos 20.4 3.9E+02 0.0083 23.8 6.2 72 65-142 265-341 (419)
374 PF09757 Arb2: Arb2 domain; I 20.3 34 0.00074 26.8 0.0 40 64-103 97-149 (178)
375 PRK05571 ribose-5-phosphate is 20.3 4E+02 0.0086 20.3 7.2 75 83-169 16-91 (148)
376 PF06180 CbiK: Cobalt chelatas 20.2 2.8E+02 0.006 23.4 5.4 64 64-143 140-205 (262)
377 cd01983 Fer4_NifH The Fer4_Nif 20.1 2E+02 0.0042 18.8 3.9 30 71-100 3-34 (99)
378 PRK13869 plasmid-partitioning 20.1 2.3E+02 0.0051 25.5 5.3 40 67-106 122-163 (405)
No 1
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=2.8e-28 Score=204.75 Aligned_cols=231 Identities=15% Similarity=0.101 Sum_probs=170.2
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC-CCCCCCcccC
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSL 114 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~S~~~~~~~ 114 (284)
.+.+..+...||..|.+|+..|.+. ..++.++||++||++++...+..+++.|+++||+|+++|+||+ |+|+|.....
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 4556678888999999998888631 2456789999999999887899999999999999999999998 9998876444
Q ss_pred Ccc-cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHH-
Q 023299 115 GWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTM- 192 (284)
Q Consensus 115 ~~~-~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~- 192 (284)
+.. ...|+.++++|++++ ..++|+|+||||||.+|+.+|... +++++|+.||+.++.+.+.......-..+|....
T Consensus 87 t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp 164 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELP 164 (307)
T ss_pred cccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCcccccc
Confidence 322 279999999999886 568999999999999997776644 4999999999999998877644421101121110
Q ss_pred ----H--HHH-HHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhh-hhcccccccc
Q 023299 193 ----A--VQY-MRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLS-EAVPIASKEN 264 (284)
Q Consensus 193 ----~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~i~~ 264 (284)
+ ... ...+++....+++...... .+....++.|+++++|.+|++++.+..+++.+... ..+++..+++
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~----i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~G 240 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDST----INKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIG 240 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccH----HHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCC
Confidence 0 000 1223333223333321111 13455678999999999999999998888888764 5788999999
Q ss_pred CccCCCCCC
Q 023299 265 SAVNEDEPS 273 (284)
Q Consensus 265 ~gH~~~~p~ 273 (284)
++|.+.++-
T Consensus 241 a~H~l~~~~ 249 (307)
T PRK13604 241 SSHDLGENL 249 (307)
T ss_pred CccccCcch
Confidence 999886653
No 2
>PHA02857 monoglyceride lipase; Provisional
Probab=99.93 E-value=3.5e-25 Score=188.03 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=151.5
Q ss_pred EecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc-CCccc-H
Q 023299 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHE-K 119 (284)
Q Consensus 42 ~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~-~~~~~-~ 119 (284)
+...||.+|.+..|.|. +..+++|+++||++++...|..+++.|++.||.|+++|+||||.|.+.... ..+.. .
T Consensus 5 ~~~~~g~~l~~~~~~~~----~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPI----TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eecCCCCEEEEEeccCC----CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 44579999999999885 235688888899999999999999999999999999999999999864322 23322 6
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH-----HHHHH-HHHHc-ccC-Chh
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-----LMLEL-VDVYK-IRL-PKF 190 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~-----~~~~~-~~~~~-~~~-~~~ 190 (284)
+|+.+.++++.+..+..+++|+||||||++|+.++.++|+ ++++|+++|...... .+... ...+. ... ..+
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKL 160 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCC
Confidence 7788888887766566789999999999999999999998 999999999754221 11111 11110 000 000
Q ss_pred -H-HHHHHHHHHhhh-hccCC--C-CCCc---H---HHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcc
Q 023299 191 -T-MAVQYMRRVIQK-KAKFD--I-MDLN---C---LKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVP 258 (284)
Q Consensus 191 -~-~~~~~~~~~~~~-~~~~~--~-~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 258 (284)
+ ............ ..... . .... . ......+.+..+.+|++++.|.+|.++++...+.+.+....+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 161 CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 0 000000000000 00000 0 0000 0 00112344667889999999999999999988888777655678
Q ss_pred ccccccCccCC
Q 023299 259 IASKENSAVNE 269 (284)
Q Consensus 259 ~~~i~~~gH~~ 269 (284)
++++++|||..
T Consensus 241 ~~~~~~~gH~~ 251 (276)
T PHA02857 241 IKIYEGAKHHL 251 (276)
T ss_pred EEEeCCCcccc
Confidence 89999999965
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=2.3e-24 Score=189.04 Aligned_cols=239 Identities=20% Similarity=0.250 Sum_probs=156.3
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-HHHHHHHHhhCCcEEEEEcCCCCCCCCCCc
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~ 111 (284)
..+..++..+.+.+|.+|.+..|.|.+ +..+++|||+||++++... |..++..|++.||+|+++|+||||.|++..
T Consensus 57 ~~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 133 (349)
T PLN02385 57 SGIKTEESYEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133 (349)
T ss_pred cCcceeeeeEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 344556667778899999999999863 3467899999999988664 678888998899999999999999998642
Q ss_pred cc-CCccc-HhHHHHHHHHHHhcC--CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH------HHHHHH
Q 023299 112 VS-LGWHE-KDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELV 180 (284)
Q Consensus 112 ~~-~~~~~-~~d~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~------~~~~~~ 180 (284)
.. .++.+ ++|+.++++.+..+. ...+++|+||||||++++.++.++|+ ++++|+++|...... ......
T Consensus 134 ~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~ 213 (349)
T PLN02385 134 GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQIL 213 (349)
T ss_pred CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHH
Confidence 21 23333 677777777775432 23589999999999999999999998 999999998643211 111111
Q ss_pred HHHcccCChh--------H-H-HHHHHHHHhhhhccCCCCCCcHH---H------HHHHHHHhhhhhhccCcccCCCCCC
Q 023299 181 DVYKIRLPKF--------T-M-AVQYMRRVIQKKAKFDIMDLNCL---K------SLLYEIITGLRCASTDAASSSSAPP 241 (284)
Q Consensus 181 ~~~~~~~~~~--------~-~-~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~d~~~ 241 (284)
.......|.. . . ....................... . ......+..+..|+++++|.+|.++
T Consensus 214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv 293 (349)
T PLN02385 214 ILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVT 293 (349)
T ss_pred HHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCcc
Confidence 1000001110 0 0 00000000000000001000000 0 1122345678899999999999999
Q ss_pred ccccccchHHHhh-hhccccccccCccCC--CCCCc
Q 023299 242 SILTAKPVDELLS-EAVPIASKENSAVNE--DEPSS 274 (284)
Q Consensus 242 ~~~~~~~~~~~~~-~~~~~~~i~~~gH~~--~~p~~ 274 (284)
+....+.+.+... .++++++++++||.. ++|+.
T Consensus 294 ~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~ 329 (349)
T PLN02385 294 DPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDE 329 (349)
T ss_pred ChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChh
Confidence 9887777777663 457889999999965 67764
No 4
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=3.2e-24 Score=186.77 Aligned_cols=238 Identities=18% Similarity=0.237 Sum_probs=154.7
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~ 113 (284)
++.++..+...||.+|+++.+.|... +..+++|||+||++.+.. .+..++..|+++||+|+++|+||||.|.+....
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 107 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY 107 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc
Confidence 34456677778999999988887531 235788999999986654 466777789889999999999999999753221
Q ss_pred -CCccc-HhHHHHHHHHHHhcC--CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHH------HHHHHHH
Q 023299 114 -LGWHE-KDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL------MLELVDV 182 (284)
Q Consensus 114 -~~~~~-~~d~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~------~~~~~~~ 182 (284)
..... .+|+.++++++.... ...+++|+||||||.+++.++.++|+ ++++|+++|....... .......
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTF 187 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHH
Confidence 22222 788999999987642 23579999999999999999999997 9999999986532210 0000000
Q ss_pred HcccCChhH------HHHH----HHHHHhhhh--ccCCCCC-CcHHH------HHHHHHHhhhhhhccCcccCCCCCCcc
Q 023299 183 YKIRLPKFT------MAVQ----YMRRVIQKK--AKFDIMD-LNCLK------SLLYEIITGLRCASTDAASSSSAPPSI 243 (284)
Q Consensus 183 ~~~~~~~~~------~~~~----~~~~~~~~~--~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~d~~~~~ 243 (284)
.....|... .... .....+... ..+.... ..... ....+.+..+.+|+++++|.+|.+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~ 267 (330)
T PLN02298 188 VARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDP 267 (330)
T ss_pred HHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCH
Confidence 000011110 0000 000000000 0111000 00000 112344677889999999999999999
Q ss_pred ccccchHHHhh-hhccccccccCccCC--CCCCc
Q 023299 244 LTAKPVDELLS-EAVPIASKENSAVNE--DEPSS 274 (284)
Q Consensus 244 ~~~~~~~~~~~-~~~~~~~i~~~gH~~--~~p~~ 274 (284)
...+.+.+.+. +++++++++++||.. ++|+.
T Consensus 268 ~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~ 301 (330)
T PLN02298 268 DVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDE 301 (330)
T ss_pred HHHHHHHHHhccCCceEEEcCCcEeeeecCCCHH
Confidence 87777766653 457889999999974 66764
No 5
>PRK10749 lysophospholipase L2; Provisional
Probab=99.91 E-value=6.3e-23 Score=178.55 Aligned_cols=228 Identities=12% Similarity=0.074 Sum_probs=148.9
Q ss_pred EEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc---
Q 023299 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS--- 113 (284)
Q Consensus 37 ~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~--- 113 (284)
+++..+...+|.++++..+.|. .++++||++||++++...|..++..+++.||.|+++|+||||.|++....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 104 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHR 104 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCc
Confidence 4556667789999999887653 24579999999999999999999989999999999999999999753221
Q ss_pred ---CCccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH----H-HHHHHHHHH
Q 023299 114 ---LGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF----D-LMLELVDVY 183 (284)
Q Consensus 114 ---~~~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~----~-~~~~~~~~~ 183 (284)
.++.+ ++|+.++++.+.+..+..+++++||||||.+++.++.++|+ ++++|+++|..... . .........
T Consensus 105 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~ 184 (330)
T PRK10749 105 GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWA 184 (330)
T ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHH
Confidence 12322 67788888777665566899999999999999999999998 99999999864321 1 111110000
Q ss_pred c-c---------------cCChh-------HHHHHHHHHHhhhhccCCC--CCC----cHHH--HHHHHHHhhhhhhccC
Q 023299 184 K-I---------------RLPKF-------TMAVQYMRRVIQKKAKFDI--MDL----NCLK--SLLYEIITGLRCASTD 232 (284)
Q Consensus 184 ~-~---------------~~~~~-------~~~~~~~~~~~~~~~~~~~--~~~----~~~~--~~~~~~~~~~~~~~~~ 232 (284)
. . ..+.. ................... ... .... .........+..|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 0 0 00000 0000000111111100000 000 0000 1112345678899999
Q ss_pred cccCCCCCCccccccchHHHhh------hhccccccccCccCC
Q 023299 233 AASSSSAPPSILTAKPVDELLS------EAVPIASKENSAVNE 269 (284)
Q Consensus 233 ~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~ 269 (284)
++|++|.+++....+.+.+.+. .+++++++++|||..
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~ 307 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEI 307 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchh
Confidence 9999999999987666666542 245789999999964
No 6
>PLN02511 hydrolase
Probab=99.90 E-value=5.5e-22 Score=175.83 Aligned_cols=258 Identities=13% Similarity=0.101 Sum_probs=156.7
Q ss_pred CCCCCCcchhhhhh-h--------cCCcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-H-HH
Q 023299 16 EYNPDQYLWERDFM-L--------AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-NE 84 (284)
Q Consensus 16 ~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~-~~ 84 (284)
.|.|++|+...+.+ + ....|+++ .+...||..+...++.+........+|+||++||++++... | ..
T Consensus 43 ~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re--~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~ 120 (388)
T PLN02511 43 PYDAFPLLGNRHVETIFASFFRSLPAVRYRRE--CLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRH 120 (388)
T ss_pred CccCCccCCCccHHHhhHHHhcCCCCCceeEE--EEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHH
Confidence 46777776555553 1 12345554 56667898898766544321123457899999999876643 4 45
Q ss_pred HHHHHhhCCcEEEEEcCCCCCCCCCCccc-CCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC---c
Q 023299 85 AAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---I 160 (284)
Q Consensus 85 ~~~~l~~~g~~v~~~d~~g~G~S~~~~~~-~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v 160 (284)
++..+.++||+|+++|+||||.|...... ......+|+.++++++..+++..+++++||||||.+++.++.++++ +
T Consensus 121 ~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v 200 (388)
T PLN02511 121 MLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPL 200 (388)
T ss_pred HHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCc
Confidence 77777789999999999999999753221 1112378999999999888776899999999999999999998875 7
Q ss_pred cEEEEcCCccCHHHHHHHHHHHHc-ccCChhH-HHHHHHH---HHh-------------hhh------ccCC--CCCCcH
Q 023299 161 AGMVLDSAFSDLFDLMLELVDVYK-IRLPKFT-MAVQYMR---RVI-------------QKK------AKFD--IMDLNC 214 (284)
Q Consensus 161 ~~lil~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~---~~~-------------~~~------~~~~--~~~~~~ 214 (284)
+++|++++..++..........+. .....+. ....... ..+ ..+ ..+. ......
T Consensus 201 ~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~ 280 (388)
T PLN02511 201 SGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKS 280 (388)
T ss_pred eEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCC
Confidence 888877766554211111000000 0000000 0000000 000 000 0000 000111
Q ss_pred HHHHH-----HHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCCCcc
Q 023299 215 LKSLL-----YEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEPSSF 275 (284)
Q Consensus 215 ~~~~~-----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p~~~ 275 (284)
..+++ .+.+..++.|++++.+.+|.+++............+++++++++++||. .+.|+.+
T Consensus 281 ~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~ 348 (388)
T PLN02511 281 VDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAP 348 (388)
T ss_pred HHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCC
Confidence 11222 2456789999999999999998876543222223456788999999995 4667643
No 7
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=4e-23 Score=160.77 Aligned_cols=209 Identities=18% Similarity=0.324 Sum_probs=160.8
Q ss_pred cEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHH-HhhCCcEEEEEcCCCCCCCCCCcc
Q 023299 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI-LLPSNITLFTLDFSGSGLSDGDYV 112 (284)
Q Consensus 34 ~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~-l~~~g~~v~~~d~~g~G~S~~~~~ 112 (284)
+++.+++.+.+.|..+|++++..- +.+.|+++++|++.|+.......+.. +...+.+|+.+++||+|.|+|.+.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps 125 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS 125 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc-----cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc
Confidence 444477777888999999988773 34889999999999999877677764 556699999999999999999988
Q ss_pred cCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCCh
Q 023299 113 SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (284)
Q Consensus 113 ~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 189 (284)
..+. ..|.+++++|+.++... .+++|+|.|+||++|..+|++..+ +.++|+.+++.++...+....-.+
T Consensus 126 E~GL--~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~------ 197 (300)
T KOG4391|consen 126 EEGL--KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPF------ 197 (300)
T ss_pred ccce--eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccc------
Confidence 8876 68899999999988543 789999999999999999999876 999999999998865544332111
Q ss_pred hHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhh-hccccccccCccC
Q 023299 190 FTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSE-AVPIASKENSAVN 268 (284)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~ 268 (284)
...++..+..+. .|.. .+.....+.|.+.++|..|+++|+..++.+.++.+. ..++.++|++.||
T Consensus 198 ---~~k~i~~lc~kn---~~~S--------~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHN 263 (300)
T KOG4391|consen 198 ---PMKYIPLLCYKN---KWLS--------YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHN 263 (300)
T ss_pred ---hhhHHHHHHHHh---hhcc--------hhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccC
Confidence 011222221110 0111 123445678999999999999999999999988853 4568899999999
Q ss_pred C
Q 023299 269 E 269 (284)
Q Consensus 269 ~ 269 (284)
.
T Consensus 264 D 264 (300)
T KOG4391|consen 264 D 264 (300)
T ss_pred c
Confidence 6
No 8
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=8.8e-23 Score=164.22 Aligned_cols=199 Identities=23% Similarity=0.314 Sum_probs=162.5
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhh-CCcEEEEEcCCCCCCCCCCcccC
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSL 114 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~S~~~~~~~ 114 (284)
..+-+..++..|..+.+..+.|.. ...++++++||+..+...+..+...+.. .+++|+.+|++|+|.|+|.+...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~ 109 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER 109 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc
Confidence 345667788899999988888864 2469999999998777766566665654 48999999999999999988877
Q ss_pred CcccHhHHHHHHHHHHhcCC-CCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHH
Q 023299 115 GWHEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMA 193 (284)
Q Consensus 115 ~~~~~~d~~~~i~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (284)
+. .+|+.++.+++++..+ .++|+|+|+|||...++.+|++.| ++++||.+|+++..+.+....... ...+.++.
T Consensus 110 n~--y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~-~~~d~f~~- 184 (258)
T KOG1552|consen 110 NL--YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT-YCFDAFPN- 184 (258)
T ss_pred cc--hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE-Eeeccccc-
Confidence 44 7999999999999984 799999999999999999999999 999999999998877655431111 11112110
Q ss_pred HHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 194 VQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
.+-++.+++|++++++.+|++++....+++.|...+.++..++.++||+.
T Consensus 185 --------------------------i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~ 234 (258)
T KOG1552|consen 185 --------------------------IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHND 234 (258)
T ss_pred --------------------------cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcc
Confidence 24467788999999999999999999999999998888999999999976
No 9
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=4.1e-22 Score=170.81 Aligned_cols=219 Identities=14% Similarity=0.117 Sum_probs=138.0
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~ 123 (284)
.+|.++++..+ +++++|||+||++++...|..+++.|++.+ .|+++|+||||.|+.+.....+.+ ++|+.
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~ 84 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLD 84 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 37888887543 235799999999999999999999998775 999999999999986543333322 44555
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH---H---HHHHHHHHHHcccC--ChhHH-H
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---F---DLMLELVDVYKIRL--PKFTM-A 193 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~---~---~~~~~~~~~~~~~~--~~~~~-~ 193 (284)
++++.+ +.++++++||||||.+++.++.++|+ ++++|++++.... . .........+.... ..... .
T Consensus 85 ~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (295)
T PRK03592 85 AWFDAL----GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEE 160 (295)
T ss_pred HHHHHh----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccch
Confidence 555444 67899999999999999999999998 9999999974321 1 11111111111000 00000 0
Q ss_pred HHHHHHHhhh--------------hcc----------CCCC----------CCcHHHHHHHHHHhhhhhhccCcccCCCC
Q 023299 194 VQYMRRVIQK--------------KAK----------FDIM----------DLNCLKSLLYEIITGLRCASTDAASSSSA 239 (284)
Q Consensus 194 ~~~~~~~~~~--------------~~~----------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 239 (284)
..+....... +.. ..+. ........+.+.+..+++|++++.|.+|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 240 (295)
T PRK03592 161 NVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGA 240 (295)
T ss_pred hhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCc
Confidence 0000000000 000 0000 00000111234456789999999999999
Q ss_pred CCccccccchHHHhhhhccccccccCccCC--CCCCccc
Q 023299 240 PPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSFQ 276 (284)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~~ 276 (284)
+++......+.....++.+++++++|||.. ++|+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 241 ILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred ccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHH
Confidence 996655555555445568899999999954 7776654
No 10
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.89 E-value=1e-22 Score=167.05 Aligned_cols=233 Identities=16% Similarity=0.200 Sum_probs=159.4
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCCh-hhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~ 114 (284)
....-.+.+.+|.+|.+..|.|... .+.+..|+++||+++.. ..+..++..|++.||.|+++|++|||.|+|-..-.
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 3445567888999999999999752 25788999999999877 47888999999999999999999999999753322
Q ss_pred -Cccc-HhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHH------HHHHHHHH
Q 023299 115 -GWHE-KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL------MLELVDVY 183 (284)
Q Consensus 115 -~~~~-~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~------~~~~~~~~ 183 (284)
++.. +.|+...++.++.+... -+.+|+||||||++++.++.++|+ .+++|+++|.....+. ....+...
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l 183 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLL 183 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHH
Confidence 2222 78888888876665433 678999999999999999999998 9999999986543321 11111111
Q ss_pred cccCChhHHH--HHHHHHHhhh----------hccCCCCCC-cHHH------HHHHHHHhhhhhhccCcccCCCCCCccc
Q 023299 184 KIRLPKFTMA--VQYMRRVIQK----------KAKFDIMDL-NCLK------SLLYEIITGLRCASTDAASSSSAPPSIL 244 (284)
Q Consensus 184 ~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 244 (284)
...+|.+... .......++. ...+..... .... ....+.+..+..|.++.+|.+|.+.++.
T Consensus 184 ~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 184 SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 1122322200 0000000000 011111100 0000 3334556677889999999999999999
Q ss_pred cccchHHHh-hhhccccccccCccCCC
Q 023299 245 TAKPVDELL-SEAVPIASKENSAVNED 270 (284)
Q Consensus 245 ~~~~~~~~~-~~~~~~~~i~~~gH~~~ 270 (284)
..+++.|.. +...++..+|+.-|.+.
T Consensus 264 ~Sk~Lye~A~S~DKTlKlYpGm~H~Ll 290 (313)
T KOG1455|consen 264 VSKELYEKASSSDKTLKLYPGMWHSLL 290 (313)
T ss_pred HHHHHHHhccCCCCceeccccHHHHhh
Confidence 888888877 45678889999999763
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=1.8e-21 Score=167.42 Aligned_cols=231 Identities=15% Similarity=0.117 Sum_probs=137.7
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcc
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~ 117 (284)
..+.+...+|.+... .|... +.+.+|+|||+||++++...|..++..|.+.||+|+++|+||||.|+.......+
T Consensus 22 ~~~~~~~~~~~~~~i-~y~~~---G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~- 96 (302)
T PRK00870 22 HYVDVDDGDGGPLRM-HYVDE---GPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY- 96 (302)
T ss_pred eeEeecCCCCceEEE-EEEec---CCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC-
Confidence 445565545655442 22222 1224679999999999999999999999888999999999999999754322111
Q ss_pred cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH-----HHHHHHHHHHcccCChhH
Q 023299 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKIRLPKFT 191 (284)
Q Consensus 118 ~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 191 (284)
..++..+.+..+.+..+.++++|+||||||.+++.++.++|+ ++++|++++..... ........ +....+...
T Consensus 97 ~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 175 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA-FSQYSPVLP 175 (302)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc-ccccCchhh
Confidence 123333334334444477899999999999999999999997 99999998642111 11111100 000001000
Q ss_pred --H----------HHHHHHHHh----hh--hcc---C----CCC--C--CcHHHHHHHHHHhhhhhhccCcccCCCCCCc
Q 023299 192 --M----------AVQYMRRVI----QK--KAK---F----DIM--D--LNCLKSLLYEIITGLRCASTDAASSSSAPPS 242 (284)
Q Consensus 192 --~----------~~~~~~~~~----~~--~~~---~----~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (284)
. ......... .. ... + ... . .......| ..+..+.+|++++.|.+|.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lii~G~~D~~~~ 254 (302)
T PRK00870 176 VGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAW-AVLERWDKPFLTAFSDSDPITG 254 (302)
T ss_pred HHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHH-HhhhcCCCceEEEecCCCCccc
Confidence 0 000000000 00 000 0 000 0 01111233 4467789999999999999988
Q ss_pred cccccchHHHhhhh--ccccccccCccCC--CCCCccc
Q 023299 243 ILTAKPVDELLSEA--VPIASKENSAVNE--DEPSSFQ 276 (284)
Q Consensus 243 ~~~~~~~~~~~~~~--~~~~~i~~~gH~~--~~p~~~~ 276 (284)
... +.+.+..+.. ..+++++++||.. ++|+.|.
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 291 (302)
T PRK00870 255 GGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELA 291 (302)
T ss_pred Cch-HHHHhhcccccccceeeecCCCccchhhChHHHH
Confidence 755 5566655432 1377899999954 7776654
No 12
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.88 E-value=5.6e-22 Score=155.25 Aligned_cols=195 Identities=15% Similarity=0.091 Sum_probs=141.0
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHHhcCCCCcEEEEEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~~~~~~~~i~l~G~ 143 (284)
++.+|+++||+.|+..+...+++.|.++||.|.+|.+||||.........++.+ .+|+.+.++++.+. +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 348999999999999999999999999999999999999998886655555555 89999999999876 6799999999
Q ss_pred ehhHHHHHHHhccCCCccEEEEcCCccCHHH---HHHHHHH---HHcc-cCChhHHHHHHHHHHhhhhccCCCCCCcHH-
Q 023299 144 SMGAVTSLLYGAEDPSIAGMVLDSAFSDLFD---LMLELVD---VYKI-RLPKFTMAVQYMRRVIQKKAKFDIMDLNCL- 215 (284)
Q Consensus 144 S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~---~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 215 (284)
||||.+|+.+|..+| ++++|.+|+.....+ ....... ..+. ..+....+...+..+. -.....+
T Consensus 93 SmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~-------~~~~~~~~ 164 (243)
T COG1647 93 SMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYK-------DTPMTTTA 164 (243)
T ss_pred cchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhh-------cchHHHHH
Confidence 999999999999999 999999988765322 2222221 1111 1111111111111111 0011111
Q ss_pred -----HHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh-hhhccccccccCccC
Q 023299 216 -----KSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL-SEAVPIASKENSAVN 268 (284)
Q Consensus 216 -----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~ 268 (284)
...-...+..+..|.+++.+.+|+.++.+.+..+.... +...++.+++++||-
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 12223457788999999999999999998666655544 566789999999993
No 13
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.88 E-value=4.8e-21 Score=169.48 Aligned_cols=229 Identities=14% Similarity=0.168 Sum_probs=151.9
Q ss_pred EEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc-CC
Q 023299 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LG 115 (284)
Q Consensus 37 ~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~-~~ 115 (284)
..+..+...+|..+.+..|.|.. +..+++|||+||++++...|..++..|+++||+|+++|+||||.|++.... ..
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 46677888899999999998853 345789999999999988899999999999999999999999999875321 12
Q ss_pred ccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC----CccEEEEcCCccCHHHH---HHHHHHHHcccC
Q 023299 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLFDL---MLELVDVYKIRL 187 (284)
Q Consensus 116 ~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~lil~~~~~~~~~~---~~~~~~~~~~~~ 187 (284)
+.. .+|+.++++++....+..+++++||||||.+++.++. +| .++++|+.+|...+... ............
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 222 6889999999977655568999999999999998764 44 39999999997543211 000001111111
Q ss_pred ChhHH----------H--HHHHHHHhhhhccCC-CCCCcH------HHHHHHHHHhhhhhhccCcccCCCCCCccccccc
Q 023299 188 PKFTM----------A--VQYMRRVIQKKAKFD-IMDLNC------LKSLLYEIITGLRCASTDAASSSSAPPSILTAKP 248 (284)
Q Consensus 188 ~~~~~----------~--~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 248 (284)
|.+.. . .............+. +..... ......+.+..+.+|++++++.+|.+++++..+.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 11100 0 000000000000000 000000 0011234456778999999999999999987777
Q ss_pred hHHHhh-hhccccccccCccCC
Q 023299 249 VDELLS-EAVPIASKENSAVNE 269 (284)
Q Consensus 249 ~~~~~~-~~~~~~~i~~~gH~~ 269 (284)
+.+... ...++.++++++|..
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l 367 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDL 367 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEe
Confidence 766643 356788899999964
No 14
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=1e-20 Score=164.25 Aligned_cols=226 Identities=12% Similarity=0.047 Sum_probs=139.8
Q ss_pred EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh--HHHHHHHHhhCCcEEEEEcCCCCCCCCCCc-ccCCcc
Q 023299 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSDGDY-VSLGWH 117 (284)
Q Consensus 41 ~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~-~~~~~~ 117 (284)
.++..||..+...+ .+.. .....+|+||++||++++... +..++..|.++||+|+++|+||+|.+.... ......
T Consensus 35 ~~~~~dg~~~~l~w-~~~~-~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~ 112 (324)
T PRK10985 35 RLELPDGDFVDLAW-SEDP-AQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG 112 (324)
T ss_pred EEECCCCCEEEEec-CCCC-ccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC
Confidence 45667888877644 3221 113357899999999887543 556888999999999999999999775432 111222
Q ss_pred cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC-C--ccEEEEcCCccCHHHHHHHHHHHHcc-cCChhH-H
Q 023299 118 EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSDLFDLMLELVDVYKI-RLPKFT-M 192 (284)
Q Consensus 118 ~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~lil~~~~~~~~~~~~~~~~~~~~-~~~~~~-~ 192 (284)
..+|+..+++++.++.+..+++++||||||.+++.++++++ + ++++|++++..++..........+.. ....+. .
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNL 192 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 37899999999998877789999999999998888877654 3 88889888876654432211110000 000000 0
Q ss_pred HHHH----HHHHhh-----------h--h------ccCCCCCCcHHHHH-----HHHHHhhhhhhccCcccCCCCCCccc
Q 023299 193 AVQY----MRRVIQ-----------K--K------AKFDIMDLNCLKSL-----LYEIITGLRCASTDAASSSSAPPSIL 244 (284)
Q Consensus 193 ~~~~----~~~~~~-----------~--~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~ 244 (284)
.... +..+.. . - ..-.........++ ..+.+..+..|++++.+.+|.+++.+
T Consensus 193 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~ 272 (324)
T PRK10985 193 LKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHE 272 (324)
T ss_pred HHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChh
Confidence 0000 000000 0 0 00000000000111 12456778889999999999998877
Q ss_pred cccchHHHhhhhccccccccCccCC
Q 023299 245 TAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
....+.+ ..++.+++.++++||..
T Consensus 273 ~~~~~~~-~~~~~~~~~~~~~GH~~ 296 (324)
T PRK10985 273 VIPKPES-LPPNVEYQLTEHGGHVG 296 (324)
T ss_pred hChHHHH-hCCCeEEEECCCCCcee
Confidence 6665544 34457788899999953
No 15
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=2.9e-21 Score=165.46 Aligned_cols=222 Identities=13% Similarity=0.146 Sum_probs=135.5
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc----CCcccHhH
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----LGWHEKDD 121 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~----~~~~~~~d 121 (284)
+|.++++.... .+.++|||+||++++...|..++..|++. |+|+++|+||||.|+..... ....+.++
T Consensus 16 ~~~~i~y~~~G-------~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 16 KGYNIRYQRAG-------TSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred cCeEEEEEEcC-------CCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHH
Confidence 67788764331 13478999999999999999999999865 79999999999999854211 00112344
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH---------HH-HHHHHHHHHccc-CCh
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---------FD-LMLELVDVYKIR-LPK 189 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~---------~~-~~~~~~~~~~~~-~~~ 189 (284)
..+.+..+.+..+.++++|+||||||.+++.+|.++|+ |+++|++++.... .. ............ ...
T Consensus 88 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (294)
T PLN02824 88 WGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGK 167 (294)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHH
Confidence 33344333333367999999999999999999999998 9999999874311 01 001011100000 000
Q ss_pred --h------HHHHHHHHHHh-----------hhh--ccCCCCCCcHHHH--------HHHHHHhhhhhhccCcccCCCCC
Q 023299 190 --F------TMAVQYMRRVI-----------QKK--AKFDIMDLNCLKS--------LLYEIITGLRCASTDAASSSSAP 240 (284)
Q Consensus 190 --~------~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~~ 240 (284)
+ ......+.... +.. ........+.... ...+.+..+.+|+++++|.+|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 247 (294)
T PLN02824 168 AFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPW 247 (294)
T ss_pred HHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCC
Confidence 0 00000000000 000 0000000000000 11345677899999999999999
Q ss_pred CccccccchHHHhhhhccccccccCccCC--CCCCccc
Q 023299 241 PSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSFQ 276 (284)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~~ 276 (284)
++....+.+.+.. +..+++++++|||.. ++|+.|.
T Consensus 248 ~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~ 284 (294)
T PLN02824 248 EPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVN 284 (294)
T ss_pred CChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHH
Confidence 9888777666554 456889999999954 7776554
No 16
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=7.9e-22 Score=168.19 Aligned_cols=228 Identities=21% Similarity=0.188 Sum_probs=150.8
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCC-CCc-ccCC
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD-GDY-VSLG 115 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~-~~~-~~~~ 115 (284)
.+-.+...||..+.+..|.+.+ ....+||++||++.+...|..++..|..+||.|+++|+||||.|. +.. ....
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 3445677899999999888763 234899999999999999999999999999999999999999997 332 2223
Q ss_pred ccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH--HHHHHHHHH----cccC
Q 023299 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELVDVY----KIRL 187 (284)
Q Consensus 116 ~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~--~~~~~~~~~----~~~~ 187 (284)
+.+ ..|+...++.+.......+++|+||||||.+++.++.+++. ++++||.+|...+.. ......... ....
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 443 77888888888766556899999999999999999999986 999999999876652 111111111 1011
Q ss_pred ChhHHH--------HHHHHHHhhhhccCCCCCC---cHHHHHH------------HHHHhhhhhhccCcccCCCCCCc-c
Q 023299 188 PKFTMA--------VQYMRRVIQKKAKFDIMDL---NCLKSLL------------YEIITGLRCASTDAASSSSAPPS-I 243 (284)
Q Consensus 188 ~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~~------------~~~~~~~~~~~~~~~~~~d~~~~-~ 243 (284)
|.+... ...+++.......+..++. ......| ......+..|++++++++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 222110 0111111111111111110 0000001 11134457788999999999999 5
Q ss_pred ccccchHHHh-hhhccccccccCccCC
Q 023299 244 LTAKPVDELL-SEAVPIASKENSAVNE 269 (284)
Q Consensus 244 ~~~~~~~~~~-~~~~~~~~i~~~gH~~ 269 (284)
+...++.+.. .+.+++++++++.|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~ 272 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHEL 272 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhh
Confidence 6444444444 4456899999999954
No 17
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.87 E-value=5.3e-22 Score=168.55 Aligned_cols=220 Identities=10% Similarity=0.090 Sum_probs=137.0
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~ 123 (284)
.+|.+++++.... +...++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+.....+.. .+++.
T Consensus 9 ~~~~~~~~~~~~~-----~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 9 LDGQSIRTAVRPG-----KEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred cCCcEEEEEEecC-----CCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 4788898754311 22357899999999999999999998865 79999999999999986543333322 44555
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH------HHHHHHHHHHcccCChhH--HHH
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIRLPKFT--MAV 194 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~ 194 (284)
++++.+ +.++++|+||||||.+++.+|.++|+ ++++|++++..... ..............+... ...
T Consensus 83 ~~i~~l----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
T TIGR02240 83 RMLDYL----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAP 158 (276)
T ss_pred HHHHHh----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhh
Confidence 555554 67899999999999999999999998 99999998765321 110000000000000000 000
Q ss_pred HHHHH-------Hhhhhc--cCCCCCCcHHHH-------HHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcc
Q 023299 195 QYMRR-------VIQKKA--KFDIMDLNCLKS-------LLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVP 258 (284)
Q Consensus 195 ~~~~~-------~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 258 (284)
..... ...... ............ ...+.+..+.+|++++.|.+|.+++++..+++.+..+ +.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~-~~~ 237 (276)
T TIGR02240 159 DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP-NAE 237 (276)
T ss_pred hhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC-CCE
Confidence 00000 000000 000000000000 0123467888999999999999999988887877765 467
Q ss_pred ccccccCccC--CCCCCccc
Q 023299 259 IASKENSAVN--EDEPSSFQ 276 (284)
Q Consensus 259 ~~~i~~~gH~--~~~p~~~~ 276 (284)
++++++ ||. .++|+.|.
T Consensus 238 ~~~i~~-gH~~~~e~p~~~~ 256 (276)
T TIGR02240 238 LHIIDD-GHLFLITRAEAVA 256 (276)
T ss_pred EEEEcC-CCchhhccHHHHH
Confidence 888875 995 47776544
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.87 E-value=1e-20 Score=168.66 Aligned_cols=223 Identities=12% Similarity=0.091 Sum_probs=146.1
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCCh-hhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~ 111 (284)
..+..+++.+...+|..|.++++.|.. +++.|+||++||+++.. +.|..+++.|+++||+|+++|+||+|.|.+..
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 344567888887888899999999963 45678888888887765 45777888999999999999999999997532
Q ss_pred ccCCcccHhHHHHHHHHHHhcC--CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCC
Q 023299 112 VSLGWHEKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (284)
Q Consensus 112 ~~~~~~~~~d~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 188 (284)
..... .....++++++.+.. +.++|+++||||||.+++.+|..+|+ ++++|+++|............. ..|
T Consensus 241 ~~~d~--~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~----~~p 314 (414)
T PRK05077 241 LTQDS--SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ----QVP 314 (414)
T ss_pred ccccH--HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh----hch
Confidence 21111 233457788887764 33899999999999999999998885 9999999987541100000000 011
Q ss_pred hhHHHHHHHHHHhhhhccCCCCCCcHHHHHH-------HH-HHhhhhhhccCcccCCCCCCccccccchHHHhhhhcccc
Q 023299 189 KFTMAVQYMRRVIQKKAKFDIMDLNCLKSLL-------YE-IITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIA 260 (284)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 260 (284)
.. ....+.. +.+........+...+ .. +...+..|++++.|.+|.+++.+..+.+.+.. .+.+++
T Consensus 315 ~~--~~~~la~----~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~ 387 (414)
T PRK05077 315 EM--YLDVLAS----RLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLL 387 (414)
T ss_pred HH--HHHHHHH----HhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEE
Confidence 11 0011100 0111000100010000 01 12467889999999999999998887666554 467889
Q ss_pred ccccCccCCCCC
Q 023299 261 SKENSAVNEDEP 272 (284)
Q Consensus 261 ~i~~~gH~~~~p 272 (284)
.++++ |..+.+
T Consensus 388 ~i~~~-~~~e~~ 398 (414)
T PRK05077 388 EIPFK-PVYRNF 398 (414)
T ss_pred EccCC-CccCCH
Confidence 99998 544444
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.87 E-value=6.7e-21 Score=171.01 Aligned_cols=229 Identities=13% Similarity=0.119 Sum_probs=142.3
Q ss_pred EecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHH-HHHHHh---hCCcEEEEEcCCCCCCCCCCcc-cCCc
Q 023299 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILL---PSNITLFTLDFSGSGLSDGDYV-SLGW 116 (284)
Q Consensus 42 ~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~G~S~~~~~-~~~~ 116 (284)
..+.+|.+|++....|.+ +..+++|||+||++++...|.. +...|. +.+|.|+++|+||||.|+.... .++
T Consensus 180 ~~~~~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt- 255 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKD---NKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT- 255 (481)
T ss_pred eEeeCCeEEEEEEecCCC---CCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC-
Confidence 344467899988877764 2346899999999999988875 334454 4699999999999999975422 122
Q ss_pred ccHhHHHHHH-HHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH----HHHHHHHHHc-cc-CC
Q 023299 117 HEKDDLKVVV-SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LMLELVDVYK-IR-LP 188 (284)
Q Consensus 117 ~~~~d~~~~i-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~----~~~~~~~~~~-~~-~~ 188 (284)
.++..+.+ ..+.+..+.++++++||||||.+++.++.++|+ ++++|++++...... .......... .. .+
T Consensus 256 --l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 256 --LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred --HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 34443444 344555578999999999999999999999998 999999986432110 0001000000 00 00
Q ss_pred hh--HH----H------------------HHHHHHHhhh-hc-cCC------CCCCc---H-----------HHHHHHHH
Q 023299 189 KF--TM----A------------------VQYMRRVIQK-KA-KFD------IMDLN---C-----------LKSLLYEI 222 (284)
Q Consensus 189 ~~--~~----~------------------~~~~~~~~~~-~~-~~~------~~~~~---~-----------~~~~~~~~ 222 (284)
.. .. . ...+...... .. .+. ..... . ....+.++
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 00 00 0 0000000000 00 000 00000 0 01122233
Q ss_pred HhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC---CCCCCcccc
Q 023299 223 ITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN---EDEPSSFQD 277 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~---~~~p~~~~~ 277 (284)
...+..|++++.|.+|.+++++..+.+.+.++ +++++++++|||. .++|+.|++
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-~a~l~vI~~aGH~~~v~e~p~~fa~ 470 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-RARVKVIDDKDHITIVVGRQKEFAR 470 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCcchhhcCHHHHHH
Confidence 44688999999999999999988887777765 5789999999996 367877764
No 20
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=1.2e-20 Score=161.04 Aligned_cols=114 Identities=20% Similarity=0.275 Sum_probs=90.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~ 124 (284)
.+|.++++... +.+++|||+||++.+...|..++..|. ++|+|+++|+||||.|+..... .+ ..++..+
T Consensus 21 ~~~~~i~y~~~--------G~~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~-~~-~~~~~~~ 89 (286)
T PRK03204 21 SSRGRIHYIDE--------GTGPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSGF-GY-QIDEHAR 89 (286)
T ss_pred cCCcEEEEEEC--------CCCCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCcc-cc-CHHHHHH
Confidence 36777875421 245889999999988888998888886 4699999999999999754321 11 2566666
Q ss_pred HHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 125 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
.+..+.+..+.++++++||||||.+++.++..+|+ ++++|++++.
T Consensus 90 ~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred HHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 66666666677899999999999999999999987 9999998764
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.86 E-value=8.1e-21 Score=161.53 Aligned_cols=203 Identities=13% Similarity=0.108 Sum_probs=126.3
Q ss_pred CccEEEEECCCCCChhhHHH---HHHHHhhCCcEEEEEcCCCCCCCCCCcccC--CcccHhHHHHHHHHHHhcCCCCcEE
Q 023299 65 PLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRIG 139 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~--~~~~~~d~~~~i~~~~~~~~~~~i~ 139 (284)
..++|||+||++++...|.. .+..+++.||+|+++|+||||.|+...... ....++++.++++.+ +.++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 45789999999987766653 345566779999999999999998643221 111245555555444 778999
Q ss_pred EEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH--------HHHHHHHHHHcccCChhHHHHHH--------------
Q 023299 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--------DLMLELVDVYKIRLPKFTMAVQY-------------- 196 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-------------- 196 (284)
++||||||.+++.++.++|+ ++++|++++..... .........+. .+........
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 182 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYA--EPSYETLKQMLNVFLFDQSLITEE 182 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhc--CCCHHHHHHHHhhCccCcccCcHH
Confidence 99999999999999999997 99999998742100 01111111110 0000000000
Q ss_pred -HHH----Hhh---hhcc----CCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcccccccc
Q 023299 197 -MRR----VIQ---KKAK----FDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKEN 264 (284)
Q Consensus 197 -~~~----~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~ 264 (284)
... ... .... ....... ... ..+.+..+.+|++++.|.+|.+++....+++.+.++ +++++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~~~~~~i~~ 259 (282)
T TIGR03343 183 LLQGRWENIQRQPEHLKNFLISSQKAPLS-TWD-VTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-DAQLHVFSR 259 (282)
T ss_pred HHHhHHHHhhcCHHHHHHHHHhccccccc-cch-HHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-CCEEEEeCC
Confidence 000 000 0000 0000000 001 124467789999999999999998877777776654 688999999
Q ss_pred CccCC--CCCCccc
Q 023299 265 SAVNE--DEPSSFQ 276 (284)
Q Consensus 265 ~gH~~--~~p~~~~ 276 (284)
|||.. ++|+.|.
T Consensus 260 agH~~~~e~p~~~~ 273 (282)
T TIGR03343 260 CGHWAQWEHADAFN 273 (282)
T ss_pred CCcCCcccCHHHHH
Confidence 99964 7776664
No 22
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.86 E-value=9.5e-21 Score=159.04 Aligned_cols=202 Identities=14% Similarity=0.085 Sum_probs=125.4
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
.|+|||+||++++...|..++..|.+ .|+|+++|+||||.|+... ..+ .+++.+ .+.+. ..++++++||||
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~~~---~~~~~~---~l~~~-~~~~~~lvGhS~ 83 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG-ALS---LADMAE---AVLQQ-APDKAIWLGWSL 83 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC-CCC---HHHHHH---HHHhc-CCCCeEEEEECH
Confidence 35799999999999999999998865 5999999999999997532 222 333333 33332 468999999999
Q ss_pred hHHHHHHHhccCCC-ccEEEEcCCccCHH----------HHHHHHHHHHcccCCh-hHHHH-----------HHHHHHhh
Q 023299 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLELVDVYKIRLPK-FTMAV-----------QYMRRVIQ 202 (284)
Q Consensus 146 Gg~~a~~~a~~~p~-v~~lil~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~ 202 (284)
||.+++.+|..+|+ ++++|++++..... ................ ..... ........
T Consensus 84 Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK10349 84 GGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKK 163 (256)
T ss_pred HHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 99999999999987 99999987642210 0000000000000000 00000 00000000
Q ss_pred hhccCCCCCCcHHH--------HHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCC
Q 023299 203 KKAKFDIMDLNCLK--------SLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEP 272 (284)
Q Consensus 203 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p 272 (284)
....-......... ....+.+..+.+|++++.|..|.+++.+..+.+.+.. ++++++++++|||. .+.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~p 242 (256)
T PRK10349 164 TVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHP 242 (256)
T ss_pred HhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCH
Confidence 00000000000000 0122456778999999999999998887666666655 46789999999995 5888
Q ss_pred Ccccc
Q 023299 273 SSFQD 277 (284)
Q Consensus 273 ~~~~~ 277 (284)
+.|++
T Consensus 243 ~~f~~ 247 (256)
T PRK10349 243 AEFCH 247 (256)
T ss_pred HHHHH
Confidence 77754
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=1.6e-20 Score=156.93 Aligned_cols=130 Identities=16% Similarity=0.172 Sum_probs=102.6
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~ 112 (284)
-.|..+.+.+. ++.++.....-++ +..++++||+||+|+....|..-...|++ ..+|.++|++|+|.|+.+..
T Consensus 63 v~~~~~~v~i~--~~~~iw~~~~~~~----~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 63 VPYSKKYVRIP--NGIEIWTITVSNE----SANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred CCcceeeeecC--CCceeEEEeeccc----ccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCC
Confidence 34555555554 5666654444332 35788999999999999988888888887 89999999999999998766
Q ss_pred cCCccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 113 SLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 113 ~~~~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
+..... .....+.|+.-+...+.++.+|+||||||++|..||.++|+ |+.|||++|.
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 554432 44566666666666688999999999999999999999998 9999999984
No 24
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=3.1e-21 Score=157.28 Aligned_cols=204 Identities=19% Similarity=0.212 Sum_probs=129.5
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHH
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 148 (284)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|..... ......++..+.+..+.+....++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999994 799999999999999987543 11111333333333333444668999999999999
Q ss_pred HHHHHhccCCC-ccEEEEcCCccCHHHHH--H---HHHHHHc-ccCChhH-HHHHHH---------HHHhhh--hccCCC
Q 023299 149 TSLLYGAEDPS-IAGMVLDSAFSDLFDLM--L---ELVDVYK-IRLPKFT-MAVQYM---------RRVIQK--KAKFDI 209 (284)
Q Consensus 149 ~a~~~a~~~p~-v~~lil~~~~~~~~~~~--~---~~~~~~~-~~~~~~~-~~~~~~---------~~~~~~--~~~~~~ 209 (284)
+++.++.++|+ ++++|+++|........ . ....... ....... .....+ ...... ......
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEY 158 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 99999999997 99999999988654322 1 1111000 0000000 000000 000000 000000
Q ss_pred CCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC--CCCCcc
Q 023299 210 MDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSF 275 (284)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~ 275 (284)
.........+.+.+..+..|++++.+.+|.+++....+.+.+..+ +++++.++++||.. ++|+.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 159 LRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEV 225 (228)
T ss_dssp HHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHH
T ss_pred cccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHH
Confidence 000011122335677888999999999999999777777776664 57899999999964 666544
No 25
>PLN02965 Probable pheophorbidase
Probab=99.85 E-value=3.2e-21 Score=161.87 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=127.4
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc-cCCccc-HhHHHHHHHHHHhcCCC-CcEEEEEEe
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQT-SRIGLWGRS 144 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~-~~~~~~-~~d~~~~i~~~~~~~~~-~~i~l~G~S 144 (284)
.|||+||++.+...|..++..|.+.||+|+++|+||||.|..... ..+..+ ++|+.++++.+ +. ++++|+|||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL----PPDHKVILVGHS 80 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc----CCCCCEEEEecC
Confidence 499999999999999999999988899999999999999975432 222221 34444444443 55 599999999
Q ss_pred hhHHHHHHHhccCCC-ccEEEEcCCcc---CH--HHHHHHHH----HHHcc------cCCh--hHHHHHHHHHHh-hh--
Q 023299 145 MGAVTSLLYGAEDPS-IAGMVLDSAFS---DL--FDLMLELV----DVYKI------RLPK--FTMAVQYMRRVI-QK-- 203 (284)
Q Consensus 145 ~Gg~~a~~~a~~~p~-v~~lil~~~~~---~~--~~~~~~~~----~~~~~------~~~~--~~~~~~~~~~~~-~~-- 203 (284)
|||.+++.++.++|+ |+++|++++.. .. ........ ..+.. ..+. ............ ..
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSP 160 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCC
Confidence 999999999999988 99999988652 11 11111000 00000 0000 000000110000 00
Q ss_pred -------hccCCCCCCcHHHHH--HHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCC
Q 023299 204 -------KAKFDIMDLNCLKSL--LYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEP 272 (284)
Q Consensus 204 -------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p 272 (284)
............... .......++.|.+++.+.+|.++++...+.+.+..+ +++++++++|||. .++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-~a~~~~i~~~GH~~~~e~p 239 (255)
T PLN02965 161 LEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-PAQTYVLEDSDHSAFFSVP 239 (255)
T ss_pred HHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-cceEEEecCCCCchhhcCH
Confidence 000000000011111 111234578999999999999998887777777665 4678889999995 4888
Q ss_pred Ccccc
Q 023299 273 SSFQD 277 (284)
Q Consensus 273 ~~~~~ 277 (284)
+.|.+
T Consensus 240 ~~v~~ 244 (255)
T PLN02965 240 TTLFQ 244 (255)
T ss_pred HHHHH
Confidence 87654
No 26
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.85 E-value=1.9e-19 Score=152.60 Aligned_cols=225 Identities=17% Similarity=0.202 Sum_probs=139.5
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC----CChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS----GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~----~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~ 113 (284)
+.+.+. .+|.+|.+.++.|.+ ..++.||++||++ ++...+..+++.|+++||+|+++|+||||.|.+...
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~- 76 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENL- 76 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-
Confidence 345665 568889999999864 2345677777765 344456778899999999999999999999986532
Q ss_pred CCccc-HhHHHHHHHHHHhcC-CCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHH-HHHHH-HHHcc--cC
Q 023299 114 LGWHE-KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDL-MLELV-DVYKI--RL 187 (284)
Q Consensus 114 ~~~~~-~~d~~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~-~~~~~-~~~~~--~~ 187 (284)
++.. ..|+.++++++++.. +.++++++||||||.+++.++...+.++++|+++|+....+. ..... ..+.. ..
T Consensus 77 -~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T TIGR03100 77 -GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS 155 (274)
T ss_pred -CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhC
Confidence 2222 688999999998764 458899999999999999998765669999999987542110 11001 00000 00
Q ss_pred ChhH--------HHHHHHHHHhh----hhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCcccc-----ccchH
Q 023299 188 PKFT--------MAVQYMRRVIQ----KKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILT-----AKPVD 250 (284)
Q Consensus 188 ~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~ 250 (284)
+.+. ........+.+ .+..-.............+.+..+..|.+++.+..|...+... .....
T Consensus 156 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~ 235 (274)
T TIGR03100 156 ADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWR 235 (274)
T ss_pred hHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhH
Confidence 0000 00000111111 1000000111112222234455668899999999998764211 14444
Q ss_pred HHhh-hhccccccccCccCC
Q 023299 251 ELLS-EAVPIASKENSAVNE 269 (284)
Q Consensus 251 ~~~~-~~~~~~~i~~~gH~~ 269 (284)
+.+. .+++++.+++++|..
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l 255 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTF 255 (274)
T ss_pred HHhhcCCeEEEecCCCCccc
Confidence 4443 678889999999976
No 27
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.85 E-value=8.3e-20 Score=152.62 Aligned_cols=137 Identities=18% Similarity=0.265 Sum_probs=108.9
Q ss_pred EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCCh----hhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCC
Q 023299 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR----ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (284)
Q Consensus 40 ~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~ 115 (284)
+.+.+..|. +.++++.|.. .+++++|||+||+++.. ..|..+++.|++.||.|+++|+||||.|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~---~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVA---VGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCc-EEEEEecCCC---CCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 456666665 5556676653 33478999999998643 356677889999999999999999999987655445
Q ss_pred ccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHH
Q 023299 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (284)
Q Consensus 116 ~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~ 181 (284)
+.. .+|+..+++++.+. +..+++|+||||||.+++.++.++|+ ++++|+++|..+....+..+.+
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHH
Confidence 443 78899999999876 57899999999999999999999886 9999999999888777666544
No 28
>PRK10566 esterase; Provisional
Probab=99.84 E-value=7.5e-20 Score=152.96 Aligned_cols=207 Identities=16% Similarity=0.175 Sum_probs=130.4
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC---C-c----ccHhH
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL---G-W----HEKDD 121 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~---~-~----~~~~d 121 (284)
+..+++.|... ++++.|+||++||++++...|..++..|+++||+|+++|+||||.+....... . | ...+|
T Consensus 12 ~~~~~~~p~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 12 IEVLHAFPAGQ-RDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred cceEEEcCCCC-CCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 33456777531 12457899999999999888989999999999999999999999764221111 1 1 12567
Q ss_pred HHHHHHHHHhcCC--CCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHH
Q 023299 122 LKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRR 199 (284)
Q Consensus 122 ~~~~i~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (284)
+.++++++.++.. .++++++||||||.+++.++..+|.+++.+.+.+........... +.......+........
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 167 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTL---FPPLIPETAAQQAEFNN 167 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHh---cccccccccccHHHHHH
Confidence 7788888877642 379999999999999999999888876655443322111111100 00000000000000111
Q ss_pred HhhhhccCCCCCCcHHHHHHHHHHhhh-hhhccCcccCCCCCCccccccchHHHhhh-----hccccccccCccCCC
Q 023299 200 VIQKKAKFDIMDLNCLKSLLYEIITGL-RCASTDAASSSSAPPSILTAKPVDELLSE-----AVPIASKENSAVNED 270 (284)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~ 270 (284)
.......++ . .+.+..+ ..|++++++.+|.++++...+++.+.+.. .+++.+++++||...
T Consensus 168 ~~~~~~~~~-----~-----~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 168 IVAPLAEWE-----V-----THQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT 234 (249)
T ss_pred HHHHHhhcC-----h-----hhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC
Confidence 111101110 0 1223444 58999999999999999988888876643 245667899999764
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=2.1e-20 Score=154.89 Aligned_cols=205 Identities=14% Similarity=0.158 Sum_probs=127.3
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEe
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S 144 (284)
++|++|++||++.+...|..+++.|. .||+|+++|+||||.|+....... ..+..+.+..+.+..+.++++++|||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~i~~~~~~~v~liG~S 87 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYS---IEDLADDVLALLDHLGIERAVFCGLS 87 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 57899999999999999999888875 689999999999999975443333 33333333444444466899999999
Q ss_pred hhHHHHHHHhccCCC-ccEEEEcCCccCHHH--HHHHHHHHHcccCChhH-HHHHHHHHHhhhhcc-------------C
Q 023299 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELVDVYKIRLPKFT-MAVQYMRRVIQKKAK-------------F 207 (284)
Q Consensus 145 ~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------~ 207 (284)
|||.+++.+|..+|+ ++++|++++...... .......... ..... .....+...+..... .
T Consensus 88 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (251)
T TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVR--AEGLAALADAVLERWFTPGFREAHPARLDLYRNML 165 (251)
T ss_pred chHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhh--hccHHHHHHHHHHHHcccccccCChHHHHHHHHHH
Confidence 999999999999887 999998876532211 1000000000 00000 000000000000000 0
Q ss_pred CCCCCc-------HH-HHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCCCccc
Q 023299 208 DIMDLN-------CL-KSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEPSSFQ 276 (284)
Q Consensus 208 ~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p~~~~ 276 (284)
...... .. ...+.+.+..+..|++++.+.+|.+++.+..+.+.+... +.++++++++||. .++|+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~ 243 (251)
T TIGR02427 166 VRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGAGHIPCVEQPEAFN 243 (251)
T ss_pred HhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCCCCcccccChHHHH
Confidence 000000 00 001124456778999999999999999887777776654 4678889999994 47776554
No 30
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.84 E-value=5.4e-20 Score=154.10 Aligned_cols=206 Identities=16% Similarity=0.124 Sum_probs=127.2
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHHhcCCCCcEEEE
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
...+|+||++||++++...|..++..|. .+|+|+++|+||||.|.... ..++.+ ++|+.++++.+ +.++++|+
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l----~~~~~~lv 86 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDAL----QIEKATFI 86 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHc----CCCceEEE
Confidence 3467899999999999999999998886 47999999999999998543 233322 55666666554 66889999
Q ss_pred EEehhHHHHHHHhccCCC-ccEEEEcCCcc-CH-HH---HHHHHHHHH-cccCChhHHHHHHHHHHhhh-------hccC
Q 023299 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFS-DL-FD---LMLELVDVY-KIRLPKFTMAVQYMRRVIQK-------KAKF 207 (284)
Q Consensus 142 G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~-~~-~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~ 207 (284)
||||||.+++.++..+|+ |+++|++++.. .. .. ......... .............+...... ...+
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSF 166 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcC
Confidence 999999999999999987 99999985422 11 00 000000000 00001100000111100000 0000
Q ss_pred CC-CCCcHHHHHH---H-----HHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC--CCCCcc
Q 023299 208 DI-MDLNCLKSLL---Y-----EIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSF 275 (284)
Q Consensus 208 ~~-~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~ 275 (284)
.. .........+ . +.+..+.+|++++.|+.|..++.+..+.+.+..+ +++++++++|||.. ++|+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~ 244 (255)
T PRK10673 167 VDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIAGAGHWVHAEKPDAV 244 (255)
T ss_pred CcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeCCCCCeeeccCHHHH
Confidence 00 0000011111 1 1234567899999999999888877777766654 57888899999954 666544
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.84 E-value=1.5e-19 Score=159.11 Aligned_cols=135 Identities=16% Similarity=0.170 Sum_probs=90.2
Q ss_pred EEEEEEEEec---CCCcEEEEEEEecCC-CCCCCCccEEEEECCCCCChhhHH--HHHHHH-------hhCCcEEEEEcC
Q 023299 35 YKRQDLEIRN---ARGHVLQCSHYMPSP-FPEDTPLPCVVYCHGNSGCRADAN--EAAVIL-------LPSNITLFTLDF 101 (284)
Q Consensus 35 ~~~~~~~~~~---~~g~~l~~~~~~P~~-~~~~~~~~~vv~~HG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~ 101 (284)
+..+++.+.. .+|.++++..+.+.. ....+..|+|||+||++++...|. .+...+ ..++|+|+++|+
T Consensus 34 ~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl 113 (360)
T PRK06489 34 WVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDG 113 (360)
T ss_pred eeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCC
Confidence 3445555554 467777765432100 000001688999999999888775 444443 246899999999
Q ss_pred CCCCCCCCCcccCC----cccHhHHHH-HHHHHHhcCCCCcEE-EEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 102 SGSGLSDGDYVSLG----WHEKDDLKV-VVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 102 ~g~G~S~~~~~~~~----~~~~~d~~~-~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
||||.|+....... ....+++.+ ++..+.+..++++++ |+||||||.+|+.++.++|+ |+++|++++.
T Consensus 114 ~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 114 IGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 99999975432110 112344443 344455556778875 89999999999999999998 9999999865
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.84 E-value=1.8e-19 Score=152.60 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=85.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-HHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~ 123 (284)
.+|..+.+....+ .+.+++||++||++++... |..+...+.+.||+|+++|+||||.|..........+.+++.
T Consensus 9 ~~~~~~~~~~~~~-----~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 9 VDGGYHLFTKTGG-----EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred CCCCeEEEEeccC-----CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 4555565433321 2246889999998766554 445555555559999999999999998543221111244444
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
+.+..+.+..+.++++++||||||.+++.++..+|+ ++++|++++...
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 445555555567889999999999999999999997 999999887644
No 33
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=8.7e-20 Score=160.57 Aligned_cols=118 Identities=19% Similarity=0.226 Sum_probs=85.6
Q ss_pred CCc-EEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc-cCCccc-HhHH
Q 023299 46 RGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDL 122 (284)
Q Consensus 46 ~g~-~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~-~~~~~~-~~d~ 122 (284)
+|. ++++....+.+ .....|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.... ..++.+ .+++
T Consensus 69 ~g~~~i~Y~~~G~g~--~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l 145 (360)
T PLN02679 69 KGEYSINYLVKGSPE--VTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELI 145 (360)
T ss_pred CCceeEEEEEecCcc--cCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHH
Confidence 455 77765443210 001347899999999999999999998865 89999999999999976432 222211 3344
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc-CCC-ccEEEEcCCcc
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-DPS-IAGMVLDSAFS 170 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~-v~~lil~~~~~ 170 (284)
.++++ ..+.++++|+||||||.+++.++.. +|+ |+++|++++..
T Consensus 146 ~~~l~----~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 146 LDFLE----EVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHH----HhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 44443 3367899999999999999988874 676 99999998653
No 34
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.83 E-value=4.4e-20 Score=156.32 Aligned_cols=221 Identities=15% Similarity=0.118 Sum_probs=134.2
Q ss_pred cCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc-cCCcccHhHH
Q 023299 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHEKDDL 122 (284)
Q Consensus 44 ~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~-~~~~~~~~d~ 122 (284)
..+|.++++....+ ...|+||++||++++...|..++..|++ +|+|+++|+||||.|..... ..+ .+++
T Consensus 12 ~~~~~~~~~~~~g~------~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~---~~~~ 81 (278)
T TIGR03056 12 TVGPFHWHVQDMGP------TAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFT---LPSM 81 (278)
T ss_pred eECCEEEEEEecCC------CCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCC---HHHH
Confidence 34788887654322 2358999999999999999999988865 79999999999999976443 223 3444
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH-HH----HHHHHHHcccCChhHHHH--
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-LM----LELVDVYKIRLPKFTMAV-- 194 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~-- 194 (284)
.+.+..+.+..+.++++|+||||||.+++.++.++|. ++++|++++...... .. ........ ..+......
T Consensus 82 ~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 160 (278)
T TIGR03056 82 AEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLA-CNPFTPPMMSR 160 (278)
T ss_pred HHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhh-hcccchHHHHh
Confidence 4444444444467889999999999999999999998 999998876432110 00 00000000 000000000
Q ss_pred -----HHHHHHhhhh-ccCC----------CCCCcH---HHH--------HHHHHHhhhhhhccCcccCCCCCCcccccc
Q 023299 195 -----QYMRRVIQKK-AKFD----------IMDLNC---LKS--------LLYEIITGLRCASTDAASSSSAPPSILTAK 247 (284)
Q Consensus 195 -----~~~~~~~~~~-~~~~----------~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 247 (284)
..+....... ...+ ...... ... .....+..+.+|++++.+.+|.+++....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~ 240 (278)
T TIGR03056 161 GAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESK 240 (278)
T ss_pred hcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHH
Confidence 0000000000 0000 000000 000 011234567889999999999999887667
Q ss_pred chHHHhhhhccccccccCccCC--CCCCccc
Q 023299 248 PVDELLSEAVPIASKENSAVNE--DEPSSFQ 276 (284)
Q Consensus 248 ~~~~~~~~~~~~~~i~~~gH~~--~~p~~~~ 276 (284)
.+.+... +++++.++++||.. ++|+.|.
T Consensus 241 ~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~ 270 (278)
T TIGR03056 241 RAATRVP-TATLHVVPGGGHLVHEEQADGVV 270 (278)
T ss_pred HHHHhcc-CCeEEEECCCCCcccccCHHHHH
Confidence 6665543 56788899999964 6666554
No 35
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.83 E-value=1.1e-19 Score=158.08 Aligned_cols=223 Identities=17% Similarity=0.171 Sum_probs=138.7
Q ss_pred EecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hH-------------------------HHHHHHHhhCCcE
Q 023299 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DA-------------------------NEAAVILLPSNIT 95 (284)
Q Consensus 42 ~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~ 95 (284)
+.+.||..|+++.|.|. .++.+|+++||++++.. .+ ..+++.|+++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 45679999999999874 35789999999998886 21 3578999999999
Q ss_pred EEEEcCCCCCCCCCCccc----CCccc-HhHHHHHHHHHHh-------------------cCC-CCcEEEEEEehhHHHH
Q 023299 96 LFTLDFSGSGLSDGDYVS----LGWHE-KDDLKVVVSYLRG-------------------NKQ-TSRIGLWGRSMGAVTS 150 (284)
Q Consensus 96 v~~~d~~g~G~S~~~~~~----~~~~~-~~d~~~~i~~~~~-------------------~~~-~~~i~l~G~S~Gg~~a 150 (284)
|+++|+||||.|.+.... .+|.+ ++|+.++++.+.+ ..+ ..+++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 999999999999864221 24443 6788888887765 223 3579999999999999
Q ss_pred HHHhccCC---------CccEEEEcCCccCHH-----------HHHHHHHHHHcccCChhHHH------H-HHHHHHh-h
Q 023299 151 LLYGAEDP---------SIAGMVLDSAFSDLF-----------DLMLELVDVYKIRLPKFTMA------V-QYMRRVI-Q 202 (284)
Q Consensus 151 ~~~a~~~p---------~v~~lil~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~-~ 202 (284)
+.++..++ .++++|+.+|...+. ......++......|.+... . ....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKF 236 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhc
Confidence 99886542 388999888764221 11111111111111221100 0 0000000 0
Q ss_pred hhccCCC-CCCcHHHHHH------HHHHhhh--hhhccCcccCCCCCCccccccchHHHhh-hhccccccccCccCC
Q 023299 203 KKAKFDI-MDLNCLKSLL------YEIITGL--RCASTDAASSSSAPPSILTAKPVDELLS-EAVPIASKENSAVNE 269 (284)
Q Consensus 203 ~~~~~~~-~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~ 269 (284)
....++. ........++ .+....+ ..|+++++|.+|.++++...+.+.+... .+++++++++++|..
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i 313 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVI 313 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCC
Confidence 0000100 0011111111 1122333 5788999999999999887666655543 457788899999965
No 36
>PLN02578 hydrolase
Probab=99.83 E-value=2e-19 Score=158.00 Aligned_cols=112 Identities=22% Similarity=0.232 Sum_probs=86.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~ 123 (284)
.+|.++++... +++++|||+||++++...|..++..|++ +|.|+++|+||||.|++....+.... .+++.
T Consensus 73 ~~~~~i~Y~~~--------g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~ 143 (354)
T PLN02578 73 WRGHKIHYVVQ--------GEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVA 143 (354)
T ss_pred ECCEEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHH
Confidence 45777775321 2347799999999999999999888864 69999999999999987654433221 34455
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
+.++.+ ..++++++||||||.+++.+|.++|+ ++++|++++.
T Consensus 144 ~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 144 DFVKEV----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHHh----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 544444 45889999999999999999999998 9999998764
No 37
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.83 E-value=1e-19 Score=151.78 Aligned_cols=206 Identities=15% Similarity=0.170 Sum_probs=126.7
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc-cCCccc-HhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-SLGWHE-KDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~-~~~~~~-~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
+.|+||++||++++...|..++..+. .+|+|+++|+||||.|..... .....+ ++++.++++.+ +..+++++|
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~l~G 86 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFHFVG 86 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEEEEE
Confidence 57899999999999999988888775 579999999999999975422 222211 34444444433 668899999
Q ss_pred EehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHH----HHHHHHcc-cCChhHHHH-------HHHHH----Hhhhh-
Q 023299 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML----ELVDVYKI-RLPKFTMAV-------QYMRR----VIQKK- 204 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~-------~~~~~----~~~~~- 204 (284)
|||||.+++.++..+|+ ++++|++++......... ........ ....+.... ..+.. .....
T Consensus 87 ~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
T TIGR03611 87 HALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEA 166 (257)
T ss_pred echhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhh
Confidence 99999999999999987 999999987654321111 00010000 000000000 00000 00000
Q ss_pred -ccCCCCCCcHHHH--------HHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCCC
Q 023299 205 -AKFDIMDLNCLKS--------LLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEPS 273 (284)
Q Consensus 205 -~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p~ 273 (284)
............. .....+..+..|+++++|.+|.+++.+..+++.+..+ +.+++.++++||. .++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~ 245 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-NAQLKLLPYGGHASNVTDPE 245 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-CceEEEECCCCCCccccCHH
Confidence 0000000000000 0113356678899999999999998877676766654 4678889999994 46676
Q ss_pred ccc
Q 023299 274 SFQ 276 (284)
Q Consensus 274 ~~~ 276 (284)
.|.
T Consensus 246 ~~~ 248 (257)
T TIGR03611 246 TFN 248 (257)
T ss_pred HHH
Confidence 543
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.82 E-value=9.8e-20 Score=150.56 Aligned_cols=104 Identities=23% Similarity=0.313 Sum_probs=83.8
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHH-HHHHHhcCCCCcEEEEEEe
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV-VSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~-i~~~~~~~~~~~i~l~G~S 144 (284)
+|+||++||++++...|..++..|+ .||.|+++|+||+|.|+....... .+.+++... +..+.+..+.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIER-YDFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccCh-hhHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 3689999999999999999999998 799999999999999976432111 123444433 5556565567899999999
Q ss_pred hhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 145 ~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
|||.+++.++.++|+ ++++|++++...
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 999999999999997 999999987644
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.82 E-value=2.4e-19 Score=156.68 Aligned_cols=122 Identities=17% Similarity=0.147 Sum_probs=86.1
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHH---HHHhhCCcEEEEEcCCCCCCCCCCcc---cCCcc--
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---VILLPSNITLFTLDFSGSGLSDGDYV---SLGWH-- 117 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~G~S~~~~~---~~~~~-- 117 (284)
+|.++++..+.+.. .+..|+||++||++++...|..++ ..|...+|+|+++|+||||.|+.... .++..
T Consensus 24 ~~~~l~y~~~G~~~---~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGTLN---AAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCccC---CCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 56677765554311 124577888888887766665443 35666789999999999999975432 12211
Q ss_pred ----cHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 118 ----EKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 118 ----~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
..+|+.+....+.+.+++++ ++|+||||||++|+.+|.++|+ |+++|++++..
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 14555554455666568899 4799999999999999999998 99999997654
No 40
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.82 E-value=1.6e-19 Score=150.04 Aligned_cols=99 Identities=23% Similarity=0.346 Sum_probs=78.2
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
+|+|||+||++++...|..++..| + +|+|+++|+||||.|+.... .+ .++..+.+..+.+..+.++++++||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~---~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DG---FADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cC---HHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 478999999999999999999987 3 79999999999999975432 22 233333333333334779999999999
Q ss_pred hHHHHHHHhccCC-C-ccEEEEcCCcc
Q 023299 146 GAVTSLLYGAEDP-S-IAGMVLDSAFS 170 (284)
Q Consensus 146 Gg~~a~~~a~~~p-~-v~~lil~~~~~ 170 (284)
||.+++.++.++| + ++++|++++..
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999985 4 99999987654
No 41
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.82 E-value=1.9e-19 Score=148.76 Aligned_cols=200 Identities=14% Similarity=0.072 Sum_probs=124.7
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
.|+||++||++++...|..++..|+ .+|+|+++|+||+|.|.... . .++.++++.+.+.. .++++++||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~-~------~~~~~~~~~~~~~~-~~~~~lvG~S~ 74 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGFG-P------LSLADAAEAIAAQA-PDPAIWLGWSL 74 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCCC-C------cCHHHHHHHHHHhC-CCCeEEEEEcH
Confidence 4789999999999999999999886 47999999999999987532 1 12333333333332 37899999999
Q ss_pred hHHHHHHHhccCCC-ccEEEEcCCccCHH-----------HHHHHHHHHHcccCChhHHHHHHHH--------------H
Q 023299 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----------DLMLELVDVYKIRLPKFTMAVQYMR--------------R 199 (284)
Q Consensus 146 Gg~~a~~~a~~~p~-v~~lil~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 199 (284)
||.+++.++.++|+ ++++|++++...+. .........+.. ........+.. .
T Consensus 75 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T TIGR01738 75 GGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD--DYQRTIERFLALQTLGTPTARQDARA 152 (245)
T ss_pred HHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh--hHHHHHHHHHHHHHhcCCccchHHHH
Confidence 99999999999998 99999987654221 001111000000 00000000000 0
Q ss_pred HhhhhccCCCCCCcHHHH--------HHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC--C
Q 023299 200 VIQKKAKFDIMDLNCLKS--------LLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--E 269 (284)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~ 269 (284)
.................. ...+.+..+++|++++.|.+|.+++....+.+.+..+ ++++++++++||. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 231 (245)
T TIGR01738 153 LKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFL 231 (245)
T ss_pred HHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccc
Confidence 000000000000001110 1123467789999999999999998877776766654 6789999999995 4
Q ss_pred CCCCcccc
Q 023299 270 DEPSSFQD 277 (284)
Q Consensus 270 ~~p~~~~~ 277 (284)
++|+.|.+
T Consensus 232 e~p~~~~~ 239 (245)
T TIGR01738 232 SHAEAFCA 239 (245)
T ss_pred cCHHHHHH
Confidence 77766543
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=7.6e-19 Score=156.43 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=79.4
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCc-ccHh-HHHHHHHHHHhcCCCCcEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKD-DLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~-~~~~-d~~~~i~~~~~~~~~~~i~l~ 141 (284)
+.+|+|||+||++++...|...+..|++ +|.|+++|+||||.|+........ .... .+.+.+....+..+.++++|+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 4578999999999988888888888865 699999999999999764322111 1111 222223333333467899999
Q ss_pred EEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 142 G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
||||||.+++.++.++|+ ++++|+++|.
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 999999999999999997 9999999865
No 43
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=8.8e-20 Score=157.23 Aligned_cols=235 Identities=15% Similarity=0.197 Sum_probs=147.6
Q ss_pred EEEecCCCc-EEEEEEEecCC----CCCCCCccEEEEECCCCCChhhHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCccc
Q 023299 40 LEIRNARGH-VLQCSHYMPSP----FPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVS 113 (284)
Q Consensus 40 ~~~~~~~g~-~l~~~~~~P~~----~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~ 113 (284)
..++...|. .+.. -|.|.. .++++.+++||++||++++...|...+..|.+. |+.|+++|++|+|.++..+..
T Consensus 28 ~~i~~~~g~~~~~~-~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~ 106 (326)
T KOG1454|consen 28 TSIEIPWGPLTIRS-KWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRG 106 (326)
T ss_pred eEEEcccCCceeEE-EEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCC
Confidence 344444553 4554 344432 122357899999999999999999999988765 599999999999966654444
Q ss_pred CCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEE---EcCCccCHHH----HHHHHHH----
Q 023299 114 LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMV---LDSAFSDLFD----LMLELVD---- 181 (284)
Q Consensus 114 ~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~li---l~~~~~~~~~----~~~~~~~---- 181 (284)
..++ ..+....+..+......++++++||||||.+|+.+|+.+|+ |+.+| ++++.....+ .......
T Consensus 107 ~~y~-~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (326)
T KOG1454|consen 107 PLYT-LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLS 185 (326)
T ss_pred Ccee-hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhcc
Confidence 4343 56666666666666567889999999999999999999998 99999 6665432211 1111111
Q ss_pred HHcccCChhH---HH---HHHHH--------------HHh----hh-------hccCCCCCCcHH-HHHHHHHHhhhh-h
Q 023299 182 VYKIRLPKFT---MA---VQYMR--------------RVI----QK-------KAKFDIMDLNCL-KSLLYEIITGLR-C 228 (284)
Q Consensus 182 ~~~~~~~~~~---~~---~~~~~--------------~~~----~~-------~~~~~~~~~~~~-~~~~~~~~~~~~-~ 228 (284)
......|... .. ..... ... +. .....+...-.. .+....+.+.+. +
T Consensus 186 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 265 (326)
T KOG1454|consen 186 ALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKC 265 (326)
T ss_pred HhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCC
Confidence 0000111110 00 00000 000 00 000000000000 122234556666 9
Q ss_pred hccCcccCCCCCCccccccchHHHhhhhccccccccCccC--CCCCCcccc
Q 023299 229 ASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN--EDEPSSFQD 277 (284)
Q Consensus 229 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~--~~~p~~~~~ 277 (284)
+++++.|.+|.+++.+....+.+.. +++++.+|++|||. .++|+.+++
T Consensus 266 pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~ 315 (326)
T KOG1454|consen 266 PVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAA 315 (326)
T ss_pred ceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHH
Confidence 9999999999999999777777777 78899999999994 578887754
No 44
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=1.1e-19 Score=151.41 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=96.6
Q ss_pred EEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcc-
Q 023299 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH- 117 (284)
Q Consensus 39 ~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~- 117 (284)
++.+.+-+|.++++..- +.+..|+|+++||+...+.+|..+...|+.+||+|+++|+||+|.|+.+.....+.
T Consensus 23 ~hk~~~~~gI~~h~~e~------g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEG------GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred ceeeEEEccEEEEEEee------cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 33444457755543221 34578999999999999999999999999999999999999999999766544433
Q ss_pred --cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 118 --EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 118 --~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
.+.|+..+++.+ +.++++++||++|+.+|..+|..+|+ ++++|+++...
T Consensus 97 ~~l~~di~~lld~L----g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~ 148 (322)
T KOG4178|consen 97 DELVGDIVALLDHL----GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPF 148 (322)
T ss_pred HHHHHHHHHHHHHh----ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCC
Confidence 144555555555 78999999999999999999999998 99999987543
No 45
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.81 E-value=4.2e-19 Score=166.07 Aligned_cols=228 Identities=16% Similarity=0.178 Sum_probs=161.0
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCC-
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDG- 109 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~- 109 (284)
.-.+.|.+.+...||.+++++++.|.+..+.++.|+||++||++.... .+....+.|+.+||.|+.+|+||.+.-..
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 335778899999999999999999988655555699999999975443 47778888999999999999998643221
Q ss_pred ----CcccCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHH
Q 023299 110 ----DYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVY 183 (284)
Q Consensus 110 ----~~~~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~ 183 (284)
.....+..+.+|+.++++++.+...+ +|++++|+|+||++++..+...+.+++.+...+..+........-..+
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhh
Confidence 12233334589999999977676544 599999999999999999999888888888887665544322211111
Q ss_pred cccCChhHHHHHHHHHHhhhh--ccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhh---hhcc
Q 023299 184 KIRLPKFTMAVQYMRRVIQKK--AKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLS---EAVP 258 (284)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~ 258 (284)
... +. ...... ....+...++ .....++++|+++++|..|+-++.+....+.+.+. ..++
T Consensus 521 ~~~-~~---------~~~~~~~~~~~~~~~~sp-----~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~ 585 (620)
T COG1506 521 RFD-PE---------ENGGGPPEDREKYEDRSP-----IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVE 585 (620)
T ss_pred cCC-HH---------HhCCCcccChHHHHhcCh-----hhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEE
Confidence 100 00 000000 0000111111 13467899999999999999999986666666553 4577
Q ss_pred ccccccCccCCCCCCcc
Q 023299 259 IASKENSAVNEDEPSSF 275 (284)
Q Consensus 259 ~~~i~~~gH~~~~p~~~ 275 (284)
++.+|+.||.+..|++-
T Consensus 586 ~~~~p~e~H~~~~~~~~ 602 (620)
T COG1506 586 LVVFPDEGHGFSRPENR 602 (620)
T ss_pred EEEeCCCCcCCCCchhH
Confidence 88899999999887743
No 46
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=9.1e-19 Score=150.91 Aligned_cols=122 Identities=22% Similarity=0.296 Sum_probs=89.5
Q ss_pred EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHh
Q 023299 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (284)
Q Consensus 41 ~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~ 120 (284)
.+...+|.++++.... +.+.++|||+||++++...+ .....+...+|+|+++|+||||.|+....... ....
T Consensus 8 ~~~~~~~~~l~y~~~g------~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~ 79 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSG------NPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE-NTTW 79 (306)
T ss_pred eEEcCCCcEEEEEECc------CCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCccc-CCHH
Confidence 4555678889875432 22356799999988765543 34444555789999999999999985432211 1245
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
++.+.+..+.+..+.++++++||||||.+++.++..+|+ ++++|++++..
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 555666666666677899999999999999999999997 99999998754
No 47
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=2.7e-19 Score=136.87 Aligned_cols=144 Identities=24% Similarity=0.302 Sum_probs=118.0
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHh-cCCCCcEEEEEEehh
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG-NKQTSRIGLWGRSMG 146 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~-~~~~~~i~l~G~S~G 146 (284)
+||++||++++...|..+++.|+++||.|+.+|+|++|.+.+ ..++.++++.+.. ....++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG---------ADAVERVLADIRAGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH---------SHHHHHHHHHHHHHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch---------hHHHHHHHHHHHhhcCCCCcEEEEEEccC
Confidence 599999999999999999999999999999999999998732 2456666666533 235699999999999
Q ss_pred HHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhh
Q 023299 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGL 226 (284)
Q Consensus 147 g~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
|.+++.++.+.+.++++|+++|+.+ .+.+...
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~~------------------------------------------------~~~~~~~ 103 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYPD------------------------------------------------SEDLAKI 103 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESSG------------------------------------------------CHHHTTT
T ss_pred cHHHHHHhhhccceeEEEEecCccc------------------------------------------------hhhhhcc
Confidence 9999999998888999999998410 0224456
Q ss_pred hhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC
Q 023299 227 RCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN 268 (284)
Q Consensus 227 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 268 (284)
+.+++++.+.+|.+++.+..+++.+.+....++.++++++|+
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 669999999999999998888888888777889999999996
No 48
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.80 E-value=3.1e-18 Score=150.84 Aligned_cols=119 Identities=17% Similarity=0.194 Sum_probs=90.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCc-ccHhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~-~~~~d~~ 123 (284)
.+|.++++.... ++.+++|||+||++++...|..++..|++ +|+|+++|+||||.|+......+. ....++.
T Consensus 112 ~~~~~~~y~~~G------~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a 184 (383)
T PLN03084 112 SDLFRWFCVESG------SNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYV 184 (383)
T ss_pred CCceEEEEEecC------CCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHH
Confidence 577777654321 23468999999999999999999998864 899999999999999865432110 1234444
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
+.+..+.+..+.++++|+|||+||.+++.++..+|+ ++++|++++..
T Consensus 185 ~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 185 SSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 444444444477899999999999999999999997 99999999764
No 49
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.80 E-value=7.8e-19 Score=136.80 Aligned_cols=222 Identities=21% Similarity=0.261 Sum_probs=152.6
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~ 112 (284)
+..+.+.+.+..+.++.+.+.. -++..+||++||+-++.. .+..++..+.+.|+.++.+|++|.|+|++...
T Consensus 8 ~~~~~ivi~n~~ne~lvg~lh~------tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~ 81 (269)
T KOG4667|consen 8 QIAQKIVIPNSRNEKLVGLLHE------TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY 81 (269)
T ss_pred eeeeEEEeccCCCchhhcceec------cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc
Confidence 4556677777777777764331 356789999999998776 46788889999999999999999999998765
Q ss_pred cCCcc-cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhH
Q 023299 113 SLGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (284)
Q Consensus 113 ~~~~~-~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (284)
.-.+. +++|+-.+++++.... ..--+++|||-||.+++.++.+++++.-+|.+++-.+......+... +.+.
T Consensus 82 ~Gn~~~eadDL~sV~q~~s~~n-r~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg------~~~l 154 (269)
T KOG4667|consen 82 YGNYNTEADDLHSVIQYFSNSN-RVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLG------EDYL 154 (269)
T ss_pred cCcccchHHHHHHHHHHhccCc-eEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhc------ccHH
Confidence 54433 5899999999997642 22237999999999999999999999999999887776554432111 0110
Q ss_pred ---HHHHHHHHHhhh-hccCCCCCCcHHH---HHHHHHHhh--hhhhccCcccCCCCCCccccccchHHHhhhhcccccc
Q 023299 192 ---MAVQYMRRVIQK-KAKFDIMDLNCLK---SLLYEIITG--LRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASK 262 (284)
Q Consensus 192 ---~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i 262 (284)
.-..++..-.++ ...+.+.+..-.. ....+.+.. ..|+++.++|.+|.++|.+.++++.++.+. .++..|
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iI 233 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEII 233 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEe
Confidence 000011100000 0111111111111 111122222 267888889999999999999999998875 789999
Q ss_pred ccCccCCC
Q 023299 263 ENSAVNED 270 (284)
Q Consensus 263 ~~~gH~~~ 270 (284)
|+|+||++
T Consensus 234 EgADHnyt 241 (269)
T KOG4667|consen 234 EGADHNYT 241 (269)
T ss_pred cCCCcCcc
Confidence 99999984
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.79 E-value=2.9e-19 Score=151.41 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=87.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc-CCcccHhHHH
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLK 123 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~-~~~~~~~d~~ 123 (284)
.+|.++.+. .| .+.+|+|||+||++.+...|..++..|.+.||+|+++|+||||.|...... .++ ...+.
T Consensus 4 ~~~~~~~~~--~~-----~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~--~~~~~ 74 (273)
T PLN02211 4 ENGEEVTDM--KP-----NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTF--DEYNK 74 (273)
T ss_pred ccccccccc--cc-----cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCH--HHHHH
Confidence 467777643 13 346789999999999999999999999888999999999999987543322 232 12233
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
.+++.+.+....++++|+||||||.+++.++..+|+ ++++|++++.
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 333444333234899999999999999999998887 9999999764
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.79 E-value=1.5e-18 Score=153.46 Aligned_cols=205 Identities=16% Similarity=0.122 Sum_probs=126.8
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~ 143 (284)
+..++|||+||++++...|..++..|.+ +|+|+++|+||||.|........ ..++.+.+..+.+..+..+++|+||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lvG~ 204 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGS---LDELAAAVLAFLDALGIERAHLVGH 204 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCC---HHHHHHHHHHHHHhcCCccEEEEee
Confidence 3468999999999999999999988865 59999999999999965433333 4555566666666667789999999
Q ss_pred ehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHccc-C-ChhH------------HHHHHHHHHhhhhc---
Q 023299 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR-L-PKFT------------MAVQYMRRVIQKKA--- 205 (284)
Q Consensus 144 S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~-~-~~~~------------~~~~~~~~~~~~~~--- 205 (284)
||||.+++.+|..+|+ ++++|+++|..............+... . ..+. .....+........
T Consensus 205 S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
T PRK14875 205 SMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDG 284 (371)
T ss_pred chHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhcccc
Confidence 9999999999999886 999999987532111000000000000 0 0000 00000000000000
Q ss_pred --------cCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC--CCCCcc
Q 023299 206 --------KFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSF 275 (284)
Q Consensus 206 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~ 275 (284)
.............+...+..+.+|++++.+.+|.+++....+. +....++..++++||+. ++|+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~ 360 (371)
T PRK14875 285 VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADV 360 (371)
T ss_pred HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHH
Confidence 0000000000011224566788999999999999887654332 23457788899999965 677655
Q ss_pred c
Q 023299 276 Q 276 (284)
Q Consensus 276 ~ 276 (284)
.
T Consensus 361 ~ 361 (371)
T PRK14875 361 N 361 (371)
T ss_pred H
Confidence 4
No 52
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=4e-19 Score=155.53 Aligned_cols=220 Identities=15% Similarity=0.127 Sum_probs=125.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh------------hHHHHHH---HHhhCCcEEEEEcCCCCCCCCC
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA------------DANEAAV---ILLPSNITLFTLDFSGSGLSDG 109 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~g~G~S~~ 109 (284)
.+|.++++..+.+ ++.| +||+||+.++.. .|..++. .|...+|+|+++|+||||.|..
T Consensus 43 ~~~~~l~y~~~G~------~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~ 115 (343)
T PRK08775 43 LEDLRLRYELIGP------AGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD 115 (343)
T ss_pred CCCceEEEEEecc------CCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC
Confidence 3677787654432 1234 555555555444 5766775 4645689999999999998753
Q ss_pred CcccCCcc-cHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHH---HHHHHHHH
Q 023299 110 DYVSLGWH-EKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL---MLELVDVY 183 (284)
Q Consensus 110 ~~~~~~~~-~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~---~~~~~~~~ 183 (284)
. ..... .++|+.++++. ++.++ ++|+||||||++++.+|.++|+ |+++|++++....... .....+..
T Consensus 116 ~--~~~~~~~a~dl~~ll~~----l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~ 189 (343)
T PRK08775 116 V--PIDTADQADAIALLLDA----LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRA 189 (343)
T ss_pred C--CCCHHHHHHHHHHHHHH----cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHH
Confidence 2 22221 14444444443 47766 4799999999999999999997 9999999875432111 11100000
Q ss_pred cccC-------ChhHHHHH--H--------HHHHhhhhcc---------------------CCCCCCcHHHHHH------
Q 023299 184 KIRL-------PKFTMAVQ--Y--------MRRVIQKKAK---------------------FDIMDLNCLKSLL------ 219 (284)
Q Consensus 184 ~~~~-------~~~~~~~~--~--------~~~~~~~~~~---------------------~~~~~~~~~~~~~------ 219 (284)
.... ........ . ....+..... .............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLH 269 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhc
Confidence 0000 00000000 0 0000000000 0000000000000
Q ss_pred HHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcccccccc-CccC--CCCCCcccc
Q 023299 220 YEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKEN-SAVN--EDEPSSFQD 277 (284)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~--~~~p~~~~~ 277 (284)
...+..++.|++++.|.+|.+++.....++.+...++.+++++++ +||. .++|+.|++
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~ 330 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDA 330 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHH
Confidence 012456788999999999999988777777776655688999984 9995 488887764
No 53
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.77 E-value=8e-18 Score=147.78 Aligned_cols=124 Identities=13% Similarity=0.096 Sum_probs=89.2
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-----------hHHHHH---HHHhhCCcEEEEEcCCC--CCCCC
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-----------DANEAA---VILLPSNITLFTLDFSG--SGLSD 108 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~g--~G~S~ 108 (284)
.+|.+|++..+.+.+ ..+.++|||+||++++.. .|..++ ..|...+|.|+++|+|| ||.|.
T Consensus 13 ~~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 13 LSDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred cCCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 367888887776532 124579999999999763 255554 25656899999999999 55554
Q ss_pred CC---cccCC------cccHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 109 GD---YVSLG------WHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 109 ~~---~~~~~------~~~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
.. +.... ....+++.+.+..+.+.++.++ ++|+||||||.+++.++..+|+ ++++|++++...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSAR 163 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCc
Confidence 21 11100 1125666666666666668888 9999999999999999999997 999999987653
No 54
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.77 E-value=1.2e-17 Score=135.06 Aligned_cols=128 Identities=24% Similarity=0.330 Sum_probs=97.1
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCc-cc
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDY-VS 113 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~-~~ 113 (284)
+.+++.+++.++ .+..+...|. .+..|+++++||++.+.-+|..++..+..+ ..+|+++|+||||++.-.. .+
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 445666665544 5666666664 356899999999999999999999987654 7888999999999997443 22
Q ss_pred CCccc-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC--CCccEEEEcCCc
Q 023299 114 LGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED--PSIAGMVLDSAF 169 (284)
Q Consensus 114 ~~~~~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~v~~lil~~~~ 169 (284)
.+... +.|+-++++++-.. ...+|+|+||||||++|.+.|... |++.+++++.-.
T Consensus 124 lS~eT~~KD~~~~i~~~fge-~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGE-LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVV 181 (343)
T ss_pred cCHHHHHHHHHHHHHHHhcc-CCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEe
Confidence 33322 77888888877644 358899999999999998887653 678888887654
No 55
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=2.2e-16 Score=136.14 Aligned_cols=252 Identities=14% Similarity=0.108 Sum_probs=155.6
Q ss_pred CCCCCCCCcchhhhhh-----hc----CCcEEEEEEEEecCCCcEEEEEEEecCCCC---CCCCccEEEEECCCCCChh-
Q 023299 14 RAEYNPDQYLWERDFM-----LA----GRSYKRQDLEIRNARGHVLQCSHYMPSPFP---EDTPLPCVVYCHGNSGCRA- 80 (284)
Q Consensus 14 ~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~---~~~~~~~vv~~HG~~~~~~- 80 (284)
...|.|..|.+..+.+ .. ...|+++ .++..||-.+...+..+.... .....|+||++||..+.+.
T Consensus 63 ~~~y~p~~w~~~ghlQT~~~~~~~~~p~~~y~Re--ii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~ 140 (409)
T KOG1838|consen 63 EEKYLPTLWLFSGHLQTLLLSFFGSKPPVEYTRE--IIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE 140 (409)
T ss_pred ccccccceeecCCeeeeeehhhcCCCCCCcceeE--EEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh
Confidence 3455565555554443 11 2345555 455578989999998776642 2357899999999987665
Q ss_pred -hHHHHHHHHhhCCcEEEEEcCCCCCCCCC-CcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 81 -DANEAAVILLPSNITLFTLDFSGSGLSDG-DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 81 -~~~~~~~~l~~~g~~v~~~d~~g~G~S~~-~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
....++..+.++||+|++++.||.|.|+- .+..+.....+|+..++++++++++..++..+|.||||++.+.+..+..
T Consensus 141 ~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g 220 (409)
T KOG1838|consen 141 SYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG 220 (409)
T ss_pred HHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhcc
Confidence 35667777888999999999999988763 2232322338999999999999999899999999999999999988764
Q ss_pred C----ccEEEEcCCccCH--HHHHHHHH------HHHcccCChhH---------------------HHHHHHHHHhhhhc
Q 023299 159 S----IAGMVLDSAFSDL--FDLMLELV------DVYKIRLPKFT---------------------MAVQYMRRVIQKKA 205 (284)
Q Consensus 159 ~----v~~lil~~~~~~~--~~~~~~~~------~~~~~~~~~~~---------------------~~~~~~~~~~~~~~ 205 (284)
+ ++++++.+|+-.+ ........ +.+...++... ...++-..+.....
T Consensus 221 ~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~ 300 (409)
T KOG1838|consen 221 DNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMF 300 (409)
T ss_pred CCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhc
Confidence 3 6666666776432 11111000 00000000000 00000111111111
Q ss_pred cCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCcc
Q 023299 206 KFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAV 267 (284)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 267 (284)
+|+..+.-.........+..++.|.+.++.-+|.+++....-.-.....+.+-+++-..+||
T Consensus 301 gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGH 362 (409)
T KOG1838|consen 301 GFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGH 362 (409)
T ss_pred CCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCce
Confidence 11110000000112245788899999999999999998765555555555565666688899
No 56
>PLN02872 triacylglycerol lipase
Probab=99.74 E-value=7e-18 Score=148.91 Aligned_cols=139 Identities=22% Similarity=0.269 Sum_probs=104.2
Q ss_pred hcCCcEEEEEEEEecCCCcEEEEEEEecCCCC--CCCCccEEEEECCCCCChhhH------HHHHHHHhhCCcEEEEEcC
Q 023299 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFP--EDTPLPCVVYCHGNSGCRADA------NEAAVILLPSNITLFTLDF 101 (284)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~--~~~~~~~vv~~HG~~~~~~~~------~~~~~~l~~~g~~v~~~d~ 101 (284)
+....|+.|+.++++.||..|... .+|...+ +..++|+|+++||++.+...| ..++..|+++||.|+.+|.
T Consensus 37 i~~~gy~~e~h~v~T~DGy~L~l~-ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~ 115 (395)
T PLN02872 37 IHPAGYSCTEHTIQTKDGYLLALQ-RVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNV 115 (395)
T ss_pred HHHcCCCceEEEEECCCCcEEEEE-EcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccc
Confidence 455678889999999999999974 5553211 123468999999998877766 3456678889999999999
Q ss_pred CCCCCCCCCc---------ccCCccc--HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC----ccEEEEc
Q 023299 102 SGSGLSDGDY---------VSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLD 166 (284)
Q Consensus 102 ~g~G~S~~~~---------~~~~~~~--~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~lil~ 166 (284)
||++.|.+.. ...+|.+ ..|+.++++++.+..+ ++++++||||||.+++.++ .+|+ |+.++++
T Consensus 116 RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l 193 (395)
T PLN02872 116 RGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALL 193 (395)
T ss_pred cccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHh
Confidence 9998764311 1234544 3699999999986533 7999999999999998555 5664 8888888
Q ss_pred CCccC
Q 023299 167 SAFSD 171 (284)
Q Consensus 167 ~~~~~ 171 (284)
+|...
T Consensus 194 ~P~~~ 198 (395)
T PLN02872 194 CPISY 198 (395)
T ss_pred cchhh
Confidence 88643
No 57
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.74 E-value=4.1e-17 Score=144.57 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=84.3
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-------------HHHHHH---HHhhCCcEEEEEcCCCC-CCCC
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAAV---ILLPSNITLFTLDFSGS-GLSD 108 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~g~-G~S~ 108 (284)
+|.++++..+...+ ....|+|||+||++++... |..++. .+...+|.|+++|++|+ |.|+
T Consensus 31 ~~~~~~y~~~G~~~---~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 31 PPVELAYETYGTLN---ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCceEEEEeccccC---CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 45566766554311 2236899999999998875 444442 34356899999999984 4443
Q ss_pred CCcc-------cC----CcccHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 109 GDYV-------SL----GWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 109 ~~~~-------~~----~~~~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
++.. .. .....++..+.+..+.+.++.++ ++|+||||||.+++.++..+|+ ++++|++++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 3210 00 01124555555555555558888 5899999999999999999998 999999987543
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=3e-17 Score=126.09 Aligned_cols=181 Identities=16% Similarity=0.229 Sum_probs=137.9
Q ss_pred EEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC-----CChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc
Q 023299 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS-----GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (284)
Q Consensus 37 ~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~ 111 (284)
..++.+....| .+.+ .+.|.. ....|+.|++|--+ .+......++..|.++||.++.+|+||-|.|.|+.
T Consensus 4 ~~~v~i~Gp~G-~le~-~~~~~~---~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 4 MPTVIINGPAG-RLEG-RYEPAK---TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred CCcEEecCCcc-ccee-ccCCCC---CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 45667766666 3665 455553 45789999999543 34445677888899999999999999999999874
Q ss_pred ccCCcccHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChh
Q 023299 112 VSLGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (284)
Q Consensus 112 ~~~~~~~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (284)
. .+..+.+|+.++++|++.+.+..+ +-|.|+|+|++|++.+|.+.|+....|..+|..+..+
T Consensus 79 D-~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~d---------------- 141 (210)
T COG2945 79 D-NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYD---------------- 141 (210)
T ss_pred c-CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchh----------------
Confidence 3 455679999999999999976644 4789999999999999999999888888887765100
Q ss_pred HHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCC
Q 023299 191 TMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNED 270 (284)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 270 (284)
...+.....+.+++.+..|++++....-++.+. ...+.+.+++++|.+.
T Consensus 142 -----------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~ 190 (210)
T COG2945 142 -----------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFH 190 (210)
T ss_pred -----------------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceec
Confidence 012344567888999999999998655445444 4567888999999764
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.73 E-value=4.4e-17 Score=130.40 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=109.7
Q ss_pred cEEEEECCCCCChhhHHH--HHHHHhh--CCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 67 PCVVYCHGNSGCRADANE--AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
|+||++||++++...|.. +...+.+ .+|.|+++|+||+| +++.+.+..+.+..+.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 579999999999998874 3455554 37999999999974 23444555555555778999999
Q ss_pred EehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcc-cCC-hhHHHHHHHHHHhhhhccCCCCCCcHHHHHHH
Q 023299 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI-RLP-KFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLY 220 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (284)
+||||++++.++.++| . .+|+++|..+..+........... ..+ .+.....++.... .++ .
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~~-----------~ 130 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLK----VMQ-----------I 130 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHH----hcC-----------C
Confidence 9999999999999998 3 467888877754443332211000 000 0000001111100 000 0
Q ss_pred HHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCCC
Q 023299 221 EIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDEP 272 (284)
Q Consensus 221 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~p 272 (284)
..+. ...++.++++..|++++...+.++.+ +++.+.+++++|++...
T Consensus 131 ~~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH~f~~~ 177 (190)
T PRK11071 131 DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNHAFVGF 177 (190)
T ss_pred ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCcchhhH
Confidence 0012 45566789999999999987776666 35677889999998664
No 60
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.73 E-value=1.6e-16 Score=161.92 Aligned_cols=105 Identities=20% Similarity=0.158 Sum_probs=82.6
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc-----CCcccHhHHHHHHHHHHhcCCCCcEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-----LGWHEKDDLKVVVSYLRGNKQTSRIG 139 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~-----~~~~~~~d~~~~i~~~~~~~~~~~i~ 139 (284)
.+++|||+||++++...|..++..|.+ +|+|+++|+||||.|...... ......+++.+.+..+.++.+.++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999998864 699999999999998753210 11112445555554444555778999
Q ss_pred EEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
|+||||||.+++.++.++|+ ++++|++++..
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 99999999999999999997 99999987653
No 61
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.71 E-value=6.9e-16 Score=128.67 Aligned_cols=229 Identities=17% Similarity=0.190 Sum_probs=145.4
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCC-
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDG- 109 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~- 109 (284)
..+.+| .+.+.||..+...+..++. ....|.||++||..|+.. ....++..+.++||.|+++++||++.+..
T Consensus 47 ~~~~re--~v~~pdg~~~~ldw~~~p~---~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~ 121 (345)
T COG0429 47 VAYTRE--RLETPDGGFIDLDWSEDPR---AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT 121 (345)
T ss_pred cccceE--EEEcCCCCEEEEeeccCcc---ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc
Confidence 345556 4455677777776776432 445789999999987665 35667788999999999999999987764
Q ss_pred CcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC-CC--ccEEEEcCCccCHHHHHHHHHHHHccc
Q 023299 110 DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS--IAGMVLDSAFSDLFDLMLELVDVYKIR 186 (284)
Q Consensus 110 ~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~--v~~lil~~~~~~~~~~~~~~~~~~~~~ 186 (284)
.+.-+.....+|+..++++++...+..++..+|.|+||.+.+.+..+. .+ +.+.+.+|.+.++......+-..+...
T Consensus 122 ~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 122 SPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLR 201 (345)
T ss_pred CcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhh
Confidence 222222233699999999999987889999999999995554454443 33 667776666555533322221111100
Q ss_pred C---------------------ChhHHH-HHHHHHHhhhhccCC------CCCCcHHHHHHH-----HHHhhhhhhccCc
Q 023299 187 L---------------------PKFTMA-VQYMRRVIQKKAKFD------IMDLNCLKSLLY-----EIITGLRCASTDA 233 (284)
Q Consensus 187 ~---------------------~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~~~ 233 (284)
+ +.++.. ...+++.-.- ..|+ ..-.....++++ .++..|..|.+++
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti-~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii 280 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTI-REFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLII 280 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchH-HhccceeeecccCCCcHHHHHHhccccccccccccceEEE
Confidence 0 001100 0011100000 0011 011111123332 3578889999999
Q ss_pred ccCCCCCCccccccchHHHhhhhccccccccCcc
Q 023299 234 ASSSSAPPSILTAKPVDELLSEAVPIASKENSAV 267 (284)
Q Consensus 234 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 267 (284)
...+|.+++.+...+......+.+.+..-+.+||
T Consensus 281 ~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGH 314 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGH 314 (345)
T ss_pred ecCCCCCCChhhCCcchhcCCCceEEEeecCCce
Confidence 9999999999888877776777788888899999
No 62
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.71 E-value=2.6e-16 Score=135.18 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=140.2
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc-
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY- 111 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~- 111 (284)
...+-.++.|++.+|..++++++.|.+. +++.|+||.+||.++....+...+. ++..||.|+.+|.||+|..+.+.
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-S
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCcc
Confidence 3455678999999999999999999852 4689999999999998777765543 67889999999999998322110
Q ss_pred -----c-----cCCcc----------cHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCc
Q 023299 112 -----V-----SLGWH----------EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (284)
Q Consensus 112 -----~-----~~~~~----------~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~ 169 (284)
. ..+.. ...|+..+++++.++..+ ++|++.|.|+||.+++.+|+..++|++++...|+
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~ 208 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPF 208 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESES
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCC
Confidence 0 01111 147889999999998665 7999999999999999999999999999999886
Q ss_pred -cCHHHHHHHHHHHHcccCChhHHHHHHHH----------HHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCC
Q 023299 170 -SDLFDLMLELVDVYKIRLPKFTMAVQYMR----------RVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSS 238 (284)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 238 (284)
.++...+..... .........+++ ..+....-++ -..+...++++++...+-.|
T Consensus 209 l~d~~~~~~~~~~-----~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D----------~~nfA~ri~~pvl~~~gl~D 273 (320)
T PF05448_consen 209 LCDFRRALELRAD-----EGPYPEIRRYFRWRDPHHEREPEVFETLSYFD----------AVNFARRIKCPVLFSVGLQD 273 (320)
T ss_dssp SSSHHHHHHHT-------STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-----------HHHHGGG--SEEEEEEETT-
T ss_pred ccchhhhhhcCCc-----cccHHHHHHHHhccCCCcccHHHHHHHHhhhh----------HHHHHHHcCCCEEEEEecCC
Confidence 455443322110 011111111111 1111111111 12457888999999999999
Q ss_pred CCCccccccchHHHhhhhccccccccCccCC
Q 023299 239 APPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
.++|++..-.....+....++++++..||..
T Consensus 274 ~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~ 304 (320)
T PF05448_consen 274 PVCPPSTQFAAYNAIPGPKELVVYPEYGHEY 304 (320)
T ss_dssp SSS-HHHHHHHHCC--SSEEEEEETT--SST
T ss_pred CCCCchhHHHHHhccCCCeeEEeccCcCCCc
Confidence 9999997777777776668899999999965
No 63
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.69 E-value=3.6e-16 Score=144.83 Aligned_cols=129 Identities=21% Similarity=0.302 Sum_probs=105.8
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh----hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~ 118 (284)
...||.+|++.++.|.. .++.|+||++||++.+.. .....+..|+++||.|+++|+||+|.|.+.....+..+
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCccc
Confidence 45799999999999974 346899999999997653 22234567889999999999999999998755443345
Q ss_pred HhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH
Q 023299 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~ 174 (284)
.+|+.++++++.++... .+|+++|+|+||.+++.+|..+|. ++++|..++..++..
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 89999999999887322 699999999999999999998866 999999988776554
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=99.69 E-value=9.5e-16 Score=143.24 Aligned_cols=104 Identities=17% Similarity=0.234 Sum_probs=79.0
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc--CCccc-H
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS--LGWHE-K 119 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~--~~~~~-~ 119 (284)
...+|.+|+++.+.+ ...|+|||+||++++...|..++..| ..+|.|+++|+||||.|+..... .+..+ +
T Consensus 8 ~~~~g~~l~~~~~g~------~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 8 VSSDGVRLAVYEWGD------PDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EeeCCEEEEEEEcCC------CCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 346899999876532 24689999999999999999999988 57899999999999999854332 22221 5
Q ss_pred hHHHHHHHHHHhcCCCC-cEEEEEEehhHHHHHHHhccC
Q 023299 120 DDLKVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
+|+.++++.+ +.+ +++|+||||||.+++.++...
T Consensus 81 ~dl~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~ 115 (582)
T PRK05855 81 DDFAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRP 115 (582)
T ss_pred HHHHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCc
Confidence 5555555544 444 499999999999998887663
No 65
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.67 E-value=1.5e-15 Score=124.45 Aligned_cols=177 Identities=20% Similarity=0.204 Sum_probs=122.7
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCC-CCCCccc----C------Ccc-
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL-SDGDYVS----L------GWH- 117 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~-S~~~~~~----~------~~~- 117 (284)
+.+++..|++ .++.|.||++|+..|-......++..|++.||.|+++|+-+-.. ....... . ...
T Consensus 1 ~~ay~~~P~~---~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 1 IDAYVARPEG---GGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEEEEEETT---SSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred CeEEEEeCCC---CCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 3577888975 25789999999999988888899999999999999999865433 1111110 0 001
Q ss_pred cHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHH
Q 023299 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQ 195 (284)
Q Consensus 118 ~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (284)
...++.+++++++++... ++|+++|+|+||.+++.++...+.++++|..-|.. .+...
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~----------------~~~~~---- 137 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGS----------------PPPPP---- 137 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SS----------------SGGGH----
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCC----------------CCCcc----
Confidence 156778889999888633 89999999999999999999887799999877710 01110
Q ss_pred HHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh---hhhccccccccCccCCCCC
Q 023299 196 YMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL---SEAVPIASKENSAVNEDEP 272 (284)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~p 272 (284)
.+....++.|+++..+++|...+.+..+.+.+.+ ....++..+++++|.+..+
T Consensus 138 ------------------------~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~ 193 (218)
T PF01738_consen 138 ------------------------LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANP 193 (218)
T ss_dssp ------------------------HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTST
T ss_pred ------------------------hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCC
Confidence 2346778899999999999999998766666666 4567788899999998666
Q ss_pred C
Q 023299 273 S 273 (284)
Q Consensus 273 ~ 273 (284)
.
T Consensus 194 ~ 194 (218)
T PF01738_consen 194 S 194 (218)
T ss_dssp T
T ss_pred C
Confidence 4
No 66
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.67 E-value=1.5e-15 Score=120.87 Aligned_cols=225 Identities=16% Similarity=0.120 Sum_probs=132.9
Q ss_pred EEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC-CCCCCCcccCCcc
Q 023299 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGWH 117 (284)
Q Consensus 39 ~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~S~~~~~~~~~~ 117 (284)
+..+...+|++++.|...|.+. .....++||+..|++...+.+..++.+|+..||.|+.+|.-.| |.|+|....+.+.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 4456668999999999998752 2345799999999999999999999999999999999999988 9999988877765
Q ss_pred c-HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCC--hhH---
Q 023299 118 E-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLP--KFT--- 191 (284)
Q Consensus 118 ~-~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~--~~~--- 191 (284)
. ..++..+++|+.+. +..+++|+.-|+.|-+|...+++- ++..+|+.-+..++...+......--...| .++
T Consensus 83 ~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 83 IGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 4 78999999999955 789999999999999999999844 699999999999999988865532111111 111
Q ss_pred HHHH---HHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh-hhhccccccccCcc
Q 023299 192 MAVQ---YMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL-SEAVPIASKENSAV 267 (284)
Q Consensus 192 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH 267 (284)
.+.. -...+...-....|.+.+... +-.+.+.+|....++.+|+++....+..+.... .+.+++..++|+.|
T Consensus 161 dfeGh~l~~~vFv~dc~e~~w~~l~ST~----~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~H 236 (294)
T PF02273_consen 161 DFEGHNLGAEVFVTDCFEHGWDDLDSTI----NDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSH 236 (294)
T ss_dssp EETTEEEEHHHHHHHHHHTT-SSHHHHH----HHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS
T ss_pred cccccccchHHHHHHHHHcCCccchhHH----HHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccc
Confidence 0000 011223333334565555554 446778899999999999999988776666654 45567888899999
Q ss_pred CCC
Q 023299 268 NED 270 (284)
Q Consensus 268 ~~~ 270 (284)
.+.
T Consensus 237 dL~ 239 (294)
T PF02273_consen 237 DLG 239 (294)
T ss_dssp -TT
T ss_pred hhh
Confidence 873
No 67
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.66 E-value=2e-15 Score=123.16 Aligned_cols=116 Identities=17% Similarity=0.208 Sum_probs=88.1
Q ss_pred EEEecCCCCCCCCccEEEEECCCCCChhhHH---HHHHHHhhCCcEEEEEcCCCCCCCCCCcc-------cCCcccHhHH
Q 023299 53 SHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFSGSGLSDGDYV-------SLGWHEKDDL 122 (284)
Q Consensus 53 ~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~G~S~~~~~-------~~~~~~~~d~ 122 (284)
++|+|++. +++.|+||++||.+++...+. .+...+.+.||.|+++|++|++.+..... ..+..+..++
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESL 79 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHH
Confidence 57888763 346899999999998877664 34455556799999999999875432110 0111236788
Q ss_pred HHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 123 KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 123 ~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
.++++++.+++.+ ++++|+|+||||.+++.++.++|+ +++++..++..
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 8899999887655 699999999999999999999998 88888877654
No 68
>PLN00021 chlorophyllase
Probab=99.66 E-value=1.8e-15 Score=129.88 Aligned_cols=180 Identities=11% Similarity=0.034 Sum_probs=121.6
Q ss_pred CcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHH
Q 023299 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVV 126 (284)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i 126 (284)
...+++.++.|.. ++..|+|||+||++++...|..+++.|++.||.|+++|++|++.+.. ..+.++..+++
T Consensus 36 ~~~~p~~v~~P~~---~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~------~~~i~d~~~~~ 106 (313)
T PLN00021 36 SPPKPLLVATPSE---AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG------TDEIKDAAAVI 106 (313)
T ss_pred CCCceEEEEeCCC---CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc------hhhHHHHHHHH
Confidence 3568888999974 45789999999999998899999999999999999999998643211 11245666667
Q ss_pred HHHHhc----------CCCCcEEEEEEehhHHHHHHHhccCC------CccEEEEcCCccCHHHHHHHHHHHHcccCChh
Q 023299 127 SYLRGN----------KQTSRIGLWGRSMGAVTSLLYGAEDP------SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKF 190 (284)
Q Consensus 127 ~~~~~~----------~~~~~i~l~G~S~Gg~~a~~~a~~~p------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (284)
+|+.+. ...++++++||||||.+++.++..++ .++++|+++|....... ....|..
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~--------~~~~p~i 178 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG--------KQTPPPV 178 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc--------cCCCCcc
Confidence 766542 12378999999999999999998876 37899998887542110 0001111
Q ss_pred HHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCC-----CCc----cc-cccchHHHhhhhcccc
Q 023299 191 TMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSA-----PPS----IL-TAKPVDELLSEAVPIA 260 (284)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----~~~----~~-~~~~~~~~~~~~~~~~ 260 (284)
. .+... ...+..|.+++.++.++ ..| .. .-.++.+.+...+...
T Consensus 179 l-------------------------~~~~~-s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~ 232 (313)
T PLN00021 179 L-------------------------TYAPH-SFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHF 232 (313)
T ss_pred c-------------------------ccCcc-cccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeee
Confidence 0 00001 11256788888887653 111 22 3344555565667788
Q ss_pred ccccCccCC
Q 023299 261 SKENSAVNE 269 (284)
Q Consensus 261 ~i~~~gH~~ 269 (284)
+++++||+.
T Consensus 233 ~~~~~gH~~ 241 (313)
T PLN00021 233 VAKDYGHMD 241 (313)
T ss_pred eecCCCcce
Confidence 899999964
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.66 E-value=3e-15 Score=127.42 Aligned_cols=207 Identities=15% Similarity=0.157 Sum_probs=126.0
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHH---HHHHHhhCCcEEEEEcCCCCCC-----CCCCc-----
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGL-----SDGDY----- 111 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~G~-----S~~~~----- 111 (284)
.-|..+.+.+|+|... .+++.|+|+|+||++++...|.. +...+...|+.|+.+|..++|. +....
T Consensus 27 ~l~~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 27 TLGCSMTFSVYFPPAS-DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred ccCCceEEEEEcCCcc-cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 5788899999999843 24578999999999988776633 3455667799999999987762 11000
Q ss_pred ------ccCC---cc----cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHH
Q 023299 112 ------VSLG---WH----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (284)
Q Consensus 112 ------~~~~---~~----~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~ 177 (284)
.... +. ..+++..+++........++++|+|+||||..|+.++.++|+ ++++++.+|..+......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~ 185 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPW 185 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCch
Confidence 0000 11 134444455444333456889999999999999999999998 899999998865321100
Q ss_pred HHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccc-cccchHHH---h
Q 023299 178 ELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSIL-TAKPVDEL---L 253 (284)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~---~ 253 (284)
. . ..+...+... ...+...++.. .. ......+.++++++|.+|.+++.. ..+.+.+. .
T Consensus 186 ~-~--------------~~~~~~~g~~-~~~~~~~d~~~-~~-~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~ 247 (283)
T PLN02442 186 G-Q--------------KAFTNYLGSD-KADWEEYDATE-LV-SKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEA 247 (283)
T ss_pred h-h--------------HHHHHHcCCC-hhhHHHcChhh-hh-hhccccCCCEEEEECCCCccccccccHHHHHHHHHHc
Confidence 0 0 0000000000 00011111111 11 123346778889999999887753 12333332 3
Q ss_pred hhhccccccccCccCCC
Q 023299 254 SEAVPIASKENSAVNED 270 (284)
Q Consensus 254 ~~~~~~~~i~~~gH~~~ 270 (284)
...+++.++++++|++.
T Consensus 248 g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 248 GAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCeEEEEeCCCCccHH
Confidence 34567788899999753
No 70
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.65 E-value=2.1e-15 Score=132.45 Aligned_cols=120 Identities=19% Similarity=0.189 Sum_probs=91.7
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-----HHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc--
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-- 118 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-- 118 (284)
++..|. .|.|... ...+++||++||...+... +..++..|++.||+|+++|++|+|.|.... ++.+
T Consensus 46 ~~~~l~--~~~~~~~--~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~ 118 (350)
T TIGR01836 46 DKVVLY--RYTPVKD--NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYI 118 (350)
T ss_pred CcEEEE--EecCCCC--cCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHH
Confidence 444454 6666531 2345679999997644332 367899999999999999999999776432 2222
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~ 172 (284)
..++.++++++++..+.++++++||||||.+++.+++.+|+ ++++|++++..++
T Consensus 119 ~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 34588899999988788999999999999999999998887 9999999886654
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.65 E-value=1.5e-14 Score=122.80 Aligned_cols=206 Identities=13% Similarity=0.163 Sum_probs=120.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHH--HHHH-hhCCcEEEEEcC--CCCCCCCCC---------
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVIL-LPSNITLFTLDF--SGSGLSDGD--------- 110 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~--~~~l-~~~g~~v~~~d~--~g~G~S~~~--------- 110 (284)
..+..+.+.+|+|.... .++.|+|+++||++++...|... +..+ .+.|+.|+++|. +|+|.+...
T Consensus 22 ~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 22 TCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred ccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 36777889999997532 34579999999999988877432 3344 456999999998 555533210
Q ss_pred --c---c----cCCcccHhHHH-HHHHHHHhcC--CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHH
Q 023299 111 --Y---V----SLGWHEKDDLK-VVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (284)
Q Consensus 111 --~---~----~~~~~~~~d~~-~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~ 177 (284)
. . ...+.....+. ++...+.+.+ ..++++++|+||||.+|+.++.++|+ ++++++++|..+....
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-- 178 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC-- 178 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC--
Confidence 0 0 00111122222 2223333333 34789999999999999999999998 9999999988653210
Q ss_pred HHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCcc-ccccchHHHh---
Q 023299 178 ELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSI-LTAKPVDELL--- 253 (284)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~--- 253 (284)
+. . ...+...+.... -.+...++. .+. +. .....++.+.+|..|..++. .....+.+.+
T Consensus 179 ----------~~-~--~~~~~~~l~~~~-~~~~~~~~~-~~~-~~-~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 179 ----------PW-G--QKAFSAYLGADE-AAWRSYDAS-LLV-AD-GGRHSTILIDQGTADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred ----------cc-h--HHHHHHHhcccc-cchhhcchH-HHH-hh-cccCCCeeEeecCCCcccCccccHHHHHHHHHHc
Confidence 00 0 011111111100 001111111 111 11 12356777788999988887 3333333333
Q ss_pred hhhccccccccCccCCC
Q 023299 254 SEAVPIASKENSAVNED 270 (284)
Q Consensus 254 ~~~~~~~~i~~~gH~~~ 270 (284)
...+++..+|+++|.+.
T Consensus 242 g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYY 258 (275)
T ss_pred CCCeEEEEeCCCCccch
Confidence 34466777899999764
No 72
>PRK10115 protease 2; Provisional
Probab=99.65 E-value=6e-15 Score=139.23 Aligned_cols=225 Identities=15% Similarity=0.092 Sum_probs=148.1
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCC
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~ 110 (284)
..++.+.+.+.+.||.+|+++++.+.....+++.|+||++||+.+... .|....+.|+++||.|+.++.||.|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 356888999999999999996666443223456799999999887554 466677788999999999999997655432
Q ss_pred ccc-----CCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHH
Q 023299 111 YVS-----LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (284)
Q Consensus 111 ~~~-----~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~ 182 (284)
... ....+.+|+.++++++.++.-. +++++.|.|.||.++..++..+|+ ++++|...|+.++...+...
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~--- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE--- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC---
Confidence 111 1113489999999999888433 899999999999999999988998 99999999999876543210
Q ss_pred HcccCChhHHHHHHHHHHhhhhccCCC-CCCcHHHHHHHHHHhhhhhh-ccCcccCCCCCCccccccchHHHhh---hhc
Q 023299 183 YKIRLPKFTMAVQYMRRVIQKKAKFDI-MDLNCLKSLLYEIITGLRCA-STDAASSSSAPPSILTAKPVDELLS---EAV 257 (284)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~---~~~ 257 (284)
.+|............ .....+.+ ...+++ ..++.++.| .++++|.+|.-+++....++...+. ...
T Consensus 569 ---~~p~~~~~~~e~G~p-~~~~~~~~l~~~SP~-----~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~ 639 (686)
T PRK10115 569 ---SIPLTTGEFEEWGNP-QDPQYYEYMKSYSPY-----DNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDD 639 (686)
T ss_pred ---CCCCChhHHHHhCCC-CCHHHHHHHHHcCch-----hccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCC
Confidence 011110000000000 00000000 001111 224455667 4566999998888875555555553 234
Q ss_pred ccccc---ccCccCC
Q 023299 258 PIASK---ENSAVNE 269 (284)
Q Consensus 258 ~~~~i---~~~gH~~ 269 (284)
+.+.+ +++||+.
T Consensus 640 ~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 640 HLLLLCTDMDSGHGG 654 (686)
T ss_pred ceEEEEecCCCCCCC
Confidence 56777 9999974
No 73
>PRK10162 acetyl esterase; Provisional
Probab=99.64 E-value=6.3e-15 Score=127.50 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=133.2
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC---CChhhHHHHHHHHhh-CCcEEEEEcCCCCCCCCCC
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~S~~~ 110 (284)
...+++.+...+| .+.+++|.|.. ...|+||++||++ ++...+..++..|++ .|+.|+.+|||...+..
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-- 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-- 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC--
Confidence 3467777877777 58889999852 3468999999988 555667778888877 59999999999654321
Q ss_pred cccCCcccHhHHHHHHHHHHhc---CCC--CcEEEEEEehhHHHHHHHhccC-------CCccEEEEcCCccCHHHHHHH
Q 023299 111 YVSLGWHEKDDLKVVVSYLRGN---KQT--SRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLE 178 (284)
Q Consensus 111 ~~~~~~~~~~d~~~~i~~~~~~---~~~--~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~lil~~~~~~~~~~~~~ 178 (284)
... ..+|+.++++|+.++ ++. ++|+|+|+|+||.+|+.++... +.++++|+++|..+..+...
T Consensus 128 -~p~---~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s- 202 (318)
T PRK10162 128 -FPQ---AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS- 202 (318)
T ss_pred -CCC---cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh-
Confidence 111 268888888888654 333 7999999999999999888642 24899999999876532211
Q ss_pred HHHHHcccCChhH--HHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh---
Q 023299 179 LVDVYKIRLPKFT--MAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL--- 253 (284)
Q Consensus 179 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--- 253 (284)
..........+. ....+.......... ..++.......-+.....+..++.++.|.+.+. ...+.+.+
T Consensus 203 -~~~~~~~~~~l~~~~~~~~~~~y~~~~~~----~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~de--~~~~~~~L~~a 275 (318)
T PRK10162 203 -RRLLGGVWDGLTQQDLQMYEEAYLSNDAD----RESPYYCLFNNDLTRDVPPCFIAGAEFDPLLDD--SRLLYQTLAAH 275 (318)
T ss_pred -HHHhCCCccccCHHHHHHHHHHhCCCccc----cCCcccCcchhhhhcCCCCeEEEecCCCcCcCh--HHHHHHHHHHc
Confidence 111110000111 111222222221110 111111101111212335788888999988764 33344333
Q ss_pred hhhccccccccCccCC
Q 023299 254 SEAVPIASKENSAVNE 269 (284)
Q Consensus 254 ~~~~~~~~i~~~gH~~ 269 (284)
+..+++.++++..|.+
T Consensus 276 Gv~v~~~~~~g~~H~f 291 (318)
T PRK10162 276 QQPCEFKLYPGTLHAF 291 (318)
T ss_pred CCCEEEEEECCCceeh
Confidence 3356788889999976
No 74
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.62 E-value=1.6e-14 Score=116.85 Aligned_cols=219 Identities=19% Similarity=0.200 Sum_probs=150.1
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCC----C
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDG----D 110 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~----~ 110 (284)
.+-=+++|...+|.+|.+|+.+|.. +++..|.||-.||.++....|..... ++..||.|+.+|.||.|.|+. .
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCC
Confidence 3445788999999999999999986 33678999999999998887766665 456799999999999998742 1
Q ss_pred c---ccCCc--------------c-cHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCcc
Q 023299 111 Y---VSLGW--------------H-EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFS 170 (284)
Q Consensus 111 ~---~~~~~--------------~-~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~ 170 (284)
+ ...++ . ...|+..+++.+.+...+ +||++.|.|.||.+++.+++..|.+++++.+-|+.
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl 210 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFL 210 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhccccccccc
Confidence 1 11111 1 156888899999888665 89999999999999999999999999999998874
Q ss_pred CHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHH--HH--HHHHHhhhhhhccCcccCCCCCCccccc
Q 023299 171 DLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLK--SL--LYEIITGLRCASTDAASSSSAPPSILTA 246 (284)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 246 (284)
+=........ . ... ...+.++++..... +....+ .+ ...+...++.+.+...+--|+++++...
T Consensus 211 ~df~r~i~~~----~-~~~----ydei~~y~k~h~~~---e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstq 278 (321)
T COG3458 211 SDFPRAIELA----T-EGP----YDEIQTYFKRHDPK---EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred ccchhheeec----c-cCc----HHHHHHHHHhcCch---HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhh
Confidence 3211111000 0 001 11112222111000 111111 00 1245677888999999999999999877
Q ss_pred cchHHHhhhhccccccccCccC
Q 023299 247 KPVDELLSEAVPIASKENSAVN 268 (284)
Q Consensus 247 ~~~~~~~~~~~~~~~i~~~gH~ 268 (284)
-.+.+......++.+++.-+|.
T Consensus 279 FA~yN~l~~~K~i~iy~~~aHe 300 (321)
T COG3458 279 FAAYNALTTSKTIEIYPYFAHE 300 (321)
T ss_pred HHHhhcccCCceEEEeeccccc
Confidence 7777777666677777666674
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.62 E-value=2.7e-14 Score=129.86 Aligned_cols=225 Identities=15% Similarity=0.107 Sum_probs=139.3
Q ss_pred EEEEEEEecCCCCCCCCccEEEEECCCCCChhhH-----HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHH
Q 023299 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (284)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~ 123 (284)
.+..++|.|.. +...+++||++||+......+ ..++..|.++||.|+++|++|+|.+........+ ..+++.
T Consensus 173 ~~eLi~Y~P~t--~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY-~~~~i~ 249 (532)
T TIGR01838 173 LFQLIQYEPTT--ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDY-IRDGVI 249 (532)
T ss_pred cEEEEEeCCCC--CcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhh-HHHHHH
Confidence 45556777763 123578999999997666544 3789999999999999999999988643221121 145688
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHH----HHhccC-CC-ccEEEEcCCccCHHHH--------------HHHHHHHH
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSL----LYGAED-PS-IAGMVLDSAFSDLFDL--------------MLELVDVY 183 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~----~~a~~~-p~-v~~lil~~~~~~~~~~--------------~~~~~~~~ 183 (284)
++++.+++..+.++++++||||||.++. .+++.+ ++ +++++++++..++.+. ++......
T Consensus 250 ~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~ 329 (532)
T TIGR01838 250 AALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGG 329 (532)
T ss_pred HHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhc
Confidence 8899998877889999999999999852 244554 55 9999999876554321 11111111
Q ss_pred cccCChhHHHH-------------HHHHHHhhhhc--cCC---CC--CCc----HHHHHHHH------------------
Q 023299 184 KIRLPKFTMAV-------------QYMRRVIQKKA--KFD---IM--DLN----CLKSLLYE------------------ 221 (284)
Q Consensus 184 ~~~~~~~~~~~-------------~~~~~~~~~~~--~~~---~~--~~~----~~~~~~~~------------------ 221 (284)
+ .+|...+.. .++...+.... .++ |. ..+ ...++.++
T Consensus 330 G-~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~ 408 (532)
T TIGR01838 330 G-YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVR 408 (532)
T ss_pred C-CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEe
Confidence 1 112111000 01111111100 010 10 000 00122211
Q ss_pred -HHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC--CCCCccccc
Q 023299 222 -IITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSFQDF 278 (284)
Q Consensus 222 -~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~~~~ 278 (284)
.+..+++|++++.+.+|.+++...+..+.+.++ +.+.++++++||.. +.|..-.+.
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-~~~~~vL~~sGHi~~ienPp~~~k~ 467 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-GPKTFVLGESGHIAGVVNPPSKNKY 467 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-CCEEEEECCCCCchHhhCCCCCCCC
Confidence 246678889999999999999988888777776 55677889999964 566544444
No 76
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.59 E-value=7.3e-16 Score=125.88 Aligned_cols=172 Identities=18% Similarity=0.212 Sum_probs=112.4
Q ss_pred HHHHHHHHhhCCcEEEEEcCCCCCCCCCCc-----ccCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHh
Q 023299 82 ANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 82 ~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~-----~~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a 154 (284)
|....+.|+++||.|+.+|+||.+...... ...+..+++|+.++++++.++..+ ++|+++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 345677788999999999999987543221 122223489999999999988644 8999999999999999999
Q ss_pred ccCCC-ccEEEEcCCccCHHHHHHHH---HH--HHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHH-HHHHHhh--
Q 023299 155 AEDPS-IAGMVLDSAFSDLFDLMLEL---VD--VYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSL-LYEIITG-- 225 (284)
Q Consensus 155 ~~~p~-v~~lil~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 225 (284)
..+|+ ++++|..+|..++....... .. ......+. ......... -...+..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~s~~~~~~~~~ 142 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPW--------------------DNPEFYRELSPISPADNVQ 142 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTT--------------------TSHHHHHHHHHGGGGGGCG
T ss_pred cccceeeeeeeccceecchhcccccccccccccccccCccc--------------------hhhhhhhhhcccccccccc
Confidence 98888 99999999987654322210 00 00000010 000000000 0011334
Q ss_pred hhhhccCcccCCCCCCccccccchHHHhhh---hccccccccCccCCCCCC
Q 023299 226 LRCASTDAASSSSAPPSILTAKPVDELLSE---AVPIASKENSAVNEDEPS 273 (284)
Q Consensus 226 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~p~ 273 (284)
...|+++++|.+|..+++....++.+.+.. .++++.+|++||....++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~ 193 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE 193 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch
Confidence 788999999999999999866666666543 467788899999776654
No 77
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=2.6e-14 Score=119.53 Aligned_cols=211 Identities=15% Similarity=0.199 Sum_probs=130.8
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHHhcCCCCcEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
...|+++++||.-|+...|..+...|++. +..|+++|.|.||.|.....- ++.. ++|+...|+.....+...++.++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h-~~~~ma~dv~~Fi~~v~~~~~~~~~~l~ 128 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH-NYEAMAEDVKLFIDGVGGSTRLDPVVLL 128 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc-CHHHHHHHHHHHHHHcccccccCCceec
Confidence 46899999999999999999999999865 889999999999999743221 2222 67777777777655456899999
Q ss_pred EEehhH-HHHHHHhccCCC-ccEEEEc-CCc---cC-H---HHHHHHHHHHHcc--cCChhHH-------------HHHH
Q 023299 142 GRSMGA-VTSLLYGAEDPS-IAGMVLD-SAF---SD-L---FDLMLELVDVYKI--RLPKFTM-------------AVQY 196 (284)
Q Consensus 142 G~S~Gg-~~a~~~a~~~p~-v~~lil~-~~~---~~-~---~~~~~~~~~~~~~--~~~~~~~-------------~~~~ 196 (284)
|||||| .+++..+...|. +..+|+. .++ .. . .+....+...-.. ..+..+. ..++
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~f 208 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQF 208 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHH
Confidence 999999 677777777887 5555554 322 11 1 1122221111110 0111111 1111
Q ss_pred HHHHhh-hhcc--CCCC-CCcHHHHHHHHH--------H--hhhhhhccCcccCCCCCCccccccchHHHhhhhcccccc
Q 023299 197 MRRVIQ-KKAK--FDIM-DLNCLKSLLYEI--------I--TGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASK 262 (284)
Q Consensus 197 ~~~~~~-~~~~--~~~~-~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i 262 (284)
+...++ .... +.|. ..+.+.+++.+. + .....+++.+.+.++..++.+....+.+.++ .+++.++
T Consensus 209 i~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp-~~e~~~l 287 (315)
T KOG2382|consen 209 ILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP-NVEVHEL 287 (315)
T ss_pred HHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc-chheeec
Confidence 111121 1111 1110 112222332221 1 2234577788889999998877777777665 5899999
Q ss_pred ccCccC--CCCCCccc
Q 023299 263 ENSAVN--EDEPSSFQ 276 (284)
Q Consensus 263 ~~~gH~--~~~p~~~~ 276 (284)
++|||+ +|+|+.|.
T Consensus 288 d~aGHwVh~E~P~~~~ 303 (315)
T KOG2382|consen 288 DEAGHWVHLEKPEEFI 303 (315)
T ss_pred ccCCceeecCCHHHHH
Confidence 999995 69998764
No 78
>PRK11460 putative hydrolase; Provisional
Probab=99.58 E-value=1.3e-14 Score=119.98 Aligned_cols=162 Identities=16% Similarity=0.150 Sum_probs=110.5
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCc---------c-------cHhHHHHHH
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW---------H-------EKDDLKVVV 126 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~---------~-------~~~d~~~~i 126 (284)
+...++||++||.+++...|..+++.|.+.+..+..++.+|...+... ....| . ....+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~-~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNG-AGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCC-CCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 446789999999999999999999999877766666666665322110 00001 0 022344555
Q ss_pred HHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhh
Q 023299 127 SYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQK 203 (284)
Q Consensus 127 ~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (284)
+++.++.++ ++|+|+|+|+||.+++.++..+|+ +.++|..++... ..+..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------~~~~~------------- 144 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------SLPET------------- 144 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------ccccc-------------
Confidence 666666544 689999999999999999988887 566666655210 00000
Q ss_pred hccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhh---hccccccccCccCCCCC
Q 023299 204 KAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSE---AVPIASKENSAVNEDEP 272 (284)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~p 272 (284)
.....++++++|.+|++++.+..+++.+.+.. .+++.+++++||....+
T Consensus 145 --------------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~ 196 (232)
T PRK11460 145 --------------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPR 196 (232)
T ss_pred --------------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHH
Confidence 01256888999999999999877777766642 35677789999987543
No 79
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.58 E-value=2.3e-13 Score=111.46 Aligned_cols=131 Identities=20% Similarity=0.339 Sum_probs=102.7
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCC
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~ 115 (284)
.+..+.++..+|..++.....-...+.+.+.++||-+||.+|+..++..+.+.|.+.|.+++++++||+|.+.+.+...
T Consensus 5 ~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~- 83 (297)
T PF06342_consen 5 VRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ- 83 (297)
T ss_pred EEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc-
Confidence 4566778888887766554443333344556799999999999999999999999999999999999999998754432
Q ss_pred cccHhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCc
Q 023299 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (284)
Q Consensus 116 ~~~~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~ 169 (284)
+. ..+-...++.+.+.+++ ++++++|||.||-.|+.++..+| ..++++++|.
T Consensus 84 ~~-n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~ 136 (297)
T PF06342_consen 84 YT-NEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP-LHGLVLINPP 136 (297)
T ss_pred cC-hHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc-cceEEEecCC
Confidence 11 35555666666666677 89999999999999999999997 6688888864
No 80
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.56 E-value=4.2e-14 Score=119.81 Aligned_cols=124 Identities=20% Similarity=0.339 Sum_probs=93.9
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHH----H------HHHhhCCcEEEEEcCCCCCCCCCCcccCC
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----A------VILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~----~------~~l~~~g~~v~~~d~~g~G~S~~~~~~~~ 115 (284)
||.+|.+.+|.| +...+++.|+||..|+++......... . ..|+++||.|+..|.||.|.|+|......
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC
Confidence 799999999999 333577899999999999654211111 1 12889999999999999999999877655
Q ss_pred cccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCC-CccEEEEcCCccC
Q 023299 116 WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAFSD 171 (284)
Q Consensus 116 ~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p-~v~~lil~~~~~~ 171 (284)
..+..|..++|+|+.++ ++ .+|+++|.|.+|..++.+|+..| .+++++..++..+
T Consensus 80 ~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 56799999999999998 55 69999999999999999998554 5999999876443
No 81
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=8.6e-14 Score=114.84 Aligned_cols=187 Identities=16% Similarity=0.123 Sum_probs=141.5
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC-CCCCCCc-----
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDY----- 111 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~S~~~~----- 111 (284)
+++.+...+ ..+.+++..|.. .++.|.||++|+..|-......+++.|++.||.|+++|+-+. |.+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 345566555 889999999985 334499999999999999999999999999999999999864 3332111
Q ss_pred -c-----cCCc-ccHhHHHHHHHHHHhcCC--CCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHH
Q 023299 112 -V-----SLGW-HEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV 182 (284)
Q Consensus 112 -~-----~~~~-~~~~d~~~~i~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~ 182 (284)
. ...+ ....|+.++++++.++.. .++|+++|+||||.+++.++...|++++.|..-|..-.
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~---------- 148 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA---------- 148 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC----------
Confidence 0 0111 227899999999988852 37899999999999999999988889999875543210
Q ss_pred HcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhh---ccc
Q 023299 183 YKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEA---VPI 259 (284)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~ 259 (284)
.. ......+++++++..++.|...+....+.+.+.+.+. +++
T Consensus 149 ------~~-----------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~ 193 (236)
T COG0412 149 ------DD-----------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDL 193 (236)
T ss_pred ------Cc-----------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeE
Confidence 00 0113467889999999999999988777777776544 667
Q ss_pred cccccCccCCCCCC
Q 023299 260 ASKENSAVNEDEPS 273 (284)
Q Consensus 260 ~~i~~~gH~~~~p~ 273 (284)
.+++++.|.+.++.
T Consensus 194 ~~y~ga~H~F~~~~ 207 (236)
T COG0412 194 EIYPGAGHGFANDR 207 (236)
T ss_pred EEeCCCccccccCC
Confidence 88899999887663
No 82
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.56 E-value=3.5e-14 Score=125.46 Aligned_cols=121 Identities=12% Similarity=0.033 Sum_probs=86.5
Q ss_pred CcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-------------hHHHHH---HHHhhCCcEEEEEcCCCCCCCC--
Q 023299 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-------------DANEAA---VILLPSNITLFTLDFSGSGLSD-- 108 (284)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d~~g~G~S~-- 108 (284)
..+|.+..|...+ ....++||++|+++++.. .|..++ ..+-...|-|+++|..|.|.|+
T Consensus 40 ~~~~~Y~t~G~ln---~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 40 DVQMGYETYGTLN---RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CceEEEEeccccC---CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 4567777776544 335689999999998542 143332 1244457999999999987532
Q ss_pred -----CC----c-cc------CCcccHhHHHHHHHHHHhcCCCCcEE-EEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 109 -----GD----Y-VS------LGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 109 -----~~----~-~~------~~~~~~~d~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
++ + .. ....+++|+.+.+..+.+.++++++. ++||||||++++.+|.++|+ ++++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 11 1 01 11123777777777777777899886 99999999999999999998 99999997653
No 83
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.54 E-value=2.8e-13 Score=115.98 Aligned_cols=142 Identities=21% Similarity=0.276 Sum_probs=96.1
Q ss_pred CCcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhH------------------HHHHHHHhhCC
Q 023299 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA------------------NEAAVILLPSN 93 (284)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~------------------~~~~~~l~~~g 93 (284)
...|+.|.+.|....+..+++++.+|.+. .++.|+||++||-++..+.. ..++..|+++|
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 45689999999999999999999999864 46789999999988765432 23577899999
Q ss_pred cEEEEEcCCCCCCCCCCcc-c----------------CCcc----cHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHH
Q 023299 94 ITLFTLDFSGSGLSDGDYV-S----------------LGWH----EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTS 150 (284)
Q Consensus 94 ~~v~~~d~~g~G~S~~~~~-~----------------~~~~----~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a 150 (284)
|.|+++|.+|+|+...... . .++. ..-|...+++|+.++..+ ++|+++|+||||..+
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a 240 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRA 240 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHH
Confidence 9999999999998653210 0 1111 134566789999888655 899999999999999
Q ss_pred HHHhccCCCccEEEEcCCccCHHHH
Q 023299 151 LLYGAEDPSIAGMVLDSAFSDLFDL 175 (284)
Q Consensus 151 ~~~a~~~p~v~~lil~~~~~~~~~~ 175 (284)
+.+++..+.|++.|..+-+....+.
T Consensus 241 ~~LaALDdRIka~v~~~~l~~~~~~ 265 (390)
T PF12715_consen 241 WWLAALDDRIKATVANGYLCTTQER 265 (390)
T ss_dssp HHHHHH-TT--EEEEES-B--HHHH
T ss_pred HHHHHcchhhHhHhhhhhhhccchh
Confidence 9999999999999988877666554
No 84
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.53 E-value=4.2e-14 Score=109.54 Aligned_cols=212 Identities=14% Similarity=0.126 Sum_probs=140.7
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCcccCCccc-HhHH
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~ 122 (284)
+|.+|.+--+ +.+...|+++.|.-|+.. +|......+.+. .+.+++.|.||+|.|..+....+.+. .+|.
T Consensus 29 ng~ql~y~~~-------G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da 101 (277)
T KOG2984|consen 29 NGTQLGYCKY-------GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDA 101 (277)
T ss_pred cCceeeeeec-------CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhH
Confidence 7888887544 334567889999876655 787777766554 49999999999999987655554332 5666
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHH---HHHHHHH---HHcc--cCChhH--
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LMLELVD---VYKI--RLPKFT-- 191 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~---~~~~~~~---~~~~--~~~~~~-- 191 (284)
+.+++.++.. ..+++.++|.|-||..|+.+|+++++ |..+|++++.+-+.. .+..-++ .|.. +.|-..
T Consensus 102 ~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Y 180 (277)
T KOG2984|consen 102 EYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHY 180 (277)
T ss_pred HHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhc
Confidence 6666655443 67999999999999999999999998 999999876543221 1111111 1111 111111
Q ss_pred ---HHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccC
Q 023299 192 ---MAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVN 268 (284)
Q Consensus 192 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 268 (284)
.+...+..+...-..|...... ++.+..+..+++|.++++|+.|.+++.+.+--+.+..+ .+++.+.+.++||
T Consensus 181 g~e~f~~~wa~wvD~v~qf~~~~dG---~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~-~a~~~~~peGkHn 256 (277)
T KOG2984|consen 181 GPETFRTQWAAWVDVVDQFHSFCDG---RFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS-LAKVEIHPEGKHN 256 (277)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCC---chHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc-cceEEEccCCCcc
Confidence 1222222222111111111111 34566788999999999999999999987776666654 4678888999998
Q ss_pred C
Q 023299 269 E 269 (284)
Q Consensus 269 ~ 269 (284)
+
T Consensus 257 ~ 257 (277)
T KOG2984|consen 257 F 257 (277)
T ss_pred e
Confidence 7
No 85
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.52 E-value=3e-14 Score=116.85 Aligned_cols=174 Identities=18% Similarity=0.204 Sum_probs=107.4
Q ss_pred cEEEEEcCCCCCCCCC--CcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 94 ITLFTLDFSGSGLSDG--DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 94 ~~v~~~d~~g~G~S~~--~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
|.|+++|.||+|.|+. ......+ ...|+.+.++.+++..+.++++++||||||.+++.+++.+|+ |+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDY-TTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTH-CHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccc-cHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999984 1222222 278888888888888899899999999999999999999998 99999999851
Q ss_pred C----HHH-HHHH-----H-HH---H-HcccCChhH-HHH---HHHHHH-----hhhhc--cCCC-CCC--------cHH
Q 023299 171 D----LFD-LMLE-----L-VD---V-YKIRLPKFT-MAV---QYMRRV-----IQKKA--KFDI-MDL--------NCL 215 (284)
Q Consensus 171 ~----~~~-~~~~-----~-~~---~-~~~~~~~~~-~~~---~~~~~~-----~~~~~--~~~~-~~~--------~~~ 215 (284)
. ... .... . .. . .....+... ... ....+. ..... .+.. ... ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 0 000 0000 0 00 0 000000000 000 000000 00000 0000 000 000
Q ss_pred ----HHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 216 ----KSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 216 ----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
..-....+..+..|.+++.+.+|.++++.....+.+..+. .++++++++||..
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~ 216 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFA 216 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHH
Confidence 0111234567899999999999999999888877766654 7899999999964
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.50 E-value=1.1e-13 Score=120.35 Aligned_cols=130 Identities=25% Similarity=0.401 Sum_probs=91.9
Q ss_pred cEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHH-HHHhhCCcEEEEEcCCCCCCCCCCcc
Q 023299 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYV 112 (284)
Q Consensus 34 ~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~-~~l~~~g~~v~~~d~~g~G~S~~~~~ 112 (284)
.++-+++.+.- +|..|.+++..|.. +++.|+||++-|..+...++..+. +.++++|++++++|.||.|.|...+.
T Consensus 162 ~~~i~~v~iP~-eg~~I~g~LhlP~~---~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 162 DYPIEEVEIPF-EGKTIPGYLHLPSG---EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp SSEEEEEEEEE-TTCEEEEEEEESSS---SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred CCCcEEEEEee-CCcEEEEEEEcCCC---CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 34445555553 45899999999973 668899999999999888766555 56889999999999999999875433
Q ss_pred cCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccC-CCccEEEEcCCc
Q 023299 113 SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAF 169 (284)
Q Consensus 113 ~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~-p~v~~lil~~~~ 169 (284)
.... ..-..++++++.+...+ .+|+++|.|+||++|.++|..+ +.++++|..+|.
T Consensus 238 ~~D~--~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 238 TQDS--SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp -S-C--CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred CcCH--HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 3222 23456789999887554 6999999999999999999766 459999999885
No 87
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=7e-13 Score=118.41 Aligned_cols=221 Identities=15% Similarity=0.123 Sum_probs=151.5
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCCh-----hhHH--HHHHHHhhCCcEEEEEcCCCCCCCCCC
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-----ADAN--EAAVILLPSNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~-----~~~~--~~~~~l~~~g~~v~~~d~~g~G~S~~~ 110 (284)
|-+.|++..|..+++.+|.|.+...+++.|+|+++=|+++-. -.+. --...|++.||.|+.+|-||.-...-.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 557788889999999999999988888899999999998621 1121 123468889999999999997443321
Q ss_pred -----cccCCcccHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHH
Q 023299 111 -----YVSLGWHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (284)
Q Consensus 111 -----~~~~~~~~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~ 181 (284)
...++..+++|..+.++++.++++. ++|++.|.|.||++++....++|+ +++.|.-+|.+++...-...-.
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTE 773 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTE 773 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchh
Confidence 2334555689999999999998754 899999999999999999999999 7777777887765321110000
Q ss_pred HHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh---hhhcc
Q 023299 182 VYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL---SEAVP 258 (284)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~ 258 (284)
.+. ..|... ..+|. ..++.. ..+-+.......+.++|--|+-+-......+...+ ++..+
T Consensus 774 RYM-g~P~~n------------E~gY~---agSV~~-~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpye 836 (867)
T KOG2281|consen 774 RYM-GYPDNN------------EHGYG---AGSVAG-HVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYE 836 (867)
T ss_pred hhc-CCCccc------------hhccc---chhHHH-HHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceE
Confidence 010 112111 01111 111111 11334445566778899888877777666665554 34567
Q ss_pred ccccccCccCCCCCCcc
Q 023299 259 IASKENSAVNEDEPSSF 275 (284)
Q Consensus 259 ~~~i~~~gH~~~~p~~~ 275 (284)
++.+|+.-|....|++-
T Consensus 837 L~IfP~ERHsiR~~es~ 853 (867)
T KOG2281|consen 837 LQIFPNERHSIRNPESG 853 (867)
T ss_pred EEEccccccccCCCccc
Confidence 88899999988888753
No 88
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.45 E-value=5.6e-13 Score=90.45 Aligned_cols=76 Identities=25% Similarity=0.402 Sum_probs=61.4
Q ss_pred CcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC-Cccc-HhHHHH
Q 023299 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWHE-KDDLKV 124 (284)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~-~~~~-~~d~~~ 124 (284)
|.+|.+..|.|++ +.+.+|+++||++.+...+..+++.|+++||.|+++|+||||.|++..... ++.+ ++|+..
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~ 76 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQ 76 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHH
Confidence 6789999999974 268999999999999999999999999999999999999999999743332 2322 455544
Q ss_pred HH
Q 023299 125 VV 126 (284)
Q Consensus 125 ~i 126 (284)
.+
T Consensus 77 ~~ 78 (79)
T PF12146_consen 77 FI 78 (79)
T ss_pred Hh
Confidence 43
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.43 E-value=1.7e-12 Score=115.08 Aligned_cols=107 Identities=11% Similarity=0.074 Sum_probs=79.6
Q ss_pred CCccEEEEECCCCCCh--hhHHH-HHHHHhh--CCcEEEEEcCCCCCCCCCCcccCCcc-cHhHHHHHHHHHHhcC--CC
Q 023299 64 TPLPCVVYCHGNSGCR--ADANE-AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNK--QT 135 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~--~~~~~-~~~~l~~--~g~~v~~~d~~g~G~S~~~~~~~~~~-~~~d~~~~i~~~~~~~--~~ 135 (284)
.++|++|++||++++. ..|.. ++..|.+ ..++|+++|++|+|.|.......... ...++.+.++++.+.. +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 3578999999998654 45654 5555543 36999999999999875432221111 1466778888876543 45
Q ss_pred CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 136 SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
++++|+||||||.+|..++...|. |.++++++|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 899999999999999999988886 99999998853
No 90
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.41 E-value=1.8e-12 Score=113.51 Aligned_cols=140 Identities=19% Similarity=0.317 Sum_probs=115.6
Q ss_pred hcCCcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhH------HHHHHHHhhCCcEEEEEcCCC
Q 023299 30 LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA------NEAAVILLPSNITLFTLDFSG 103 (284)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~------~~~~~~l~~~g~~v~~~d~~g 103 (284)
+....|+.|++.+++.||+.|. .+.+|... +++|+|++.||.-+++..| ..++-.|++.||.|+.-+.||
T Consensus 41 i~~~gy~~E~h~V~T~DgYiL~-lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGYILT-LHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHHcCCceEEEEEEccCCeEEE-EeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 5556678899999999999666 58888742 7899999999999888877 345567889999999999999
Q ss_pred CCCCCC----------CcccCCccc--HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC----ccEEEEcC
Q 023299 104 SGLSDG----------DYVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDS 167 (284)
Q Consensus 104 ~G~S~~----------~~~~~~~~~--~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~lil~~ 167 (284)
.-.|.. .....+|.+ ..|+.++|+++.+..+.+++..+|||.|+.+.+.+++..|+ |+..++.+
T Consensus 117 n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLA 196 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALA 196 (403)
T ss_pred cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeec
Confidence 877653 123345555 78999999999999888999999999999999999988875 99999999
Q ss_pred CccCHH
Q 023299 168 AFSDLF 173 (284)
Q Consensus 168 ~~~~~~ 173 (284)
|...+.
T Consensus 197 P~~~~k 202 (403)
T KOG2624|consen 197 PAAFPK 202 (403)
T ss_pred chhhhc
Confidence 987544
No 91
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.40 E-value=4.2e-12 Score=125.41 Aligned_cols=118 Identities=18% Similarity=0.138 Sum_probs=79.5
Q ss_pred EEEEEEecCCCCC--CCCccEEEEECCCCCChhhHHHH-----HHHHhhCCcEEEEEcCCCCCCCCCCccc--CCccc-H
Q 023299 50 LQCSHYMPSPFPE--DTPLPCVVYCHGNSGCRADANEA-----AVILLPSNITLFTLDFSGSGLSDGDYVS--LGWHE-K 119 (284)
Q Consensus 50 l~~~~~~P~~~~~--~~~~~~vv~~HG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~g~G~S~~~~~~--~~~~~-~ 119 (284)
+..++|.|....- ...+++|||+||++.+...|... +..|.+.||.|+++|+ |.++..... .++.+ +
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i 125 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHV 125 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHH
Confidence 4445777754211 23568999999999988888654 7889899999999995 555433221 22211 2
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC-CC-ccEEEEcCCccC
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSD 171 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~-v~~lil~~~~~~ 171 (284)
..+.++++.++.. ..++++++||||||.+++.+++.+ ++ |+++|++++..+
T Consensus 126 ~~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 126 VALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 3334444444333 236899999999999999888754 43 999998766543
No 92
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.39 E-value=1.4e-12 Score=110.32 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCccEEEEECCCCCCh-hhHHH-HHHHHhh-CCcEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHHhcC--CCCc
Q 023299 64 TPLPCVVYCHGNSGCR-ADANE-AAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNK--QTSR 137 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~-~~~~~-~~~~l~~-~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~~~~--~~~~ 137 (284)
.++|++|++||++++. ..|.. +...+.+ .+++|+++|+++++.+.-......... .+++..+++++.+.. +.++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 3578999999999887 45544 4444544 589999999998733221111111111 467788888887763 4489
Q ss_pred EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 138 i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
++|+||||||.+|..++...|+ ++++++++|..
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 9999999999999999998886 99999998764
No 93
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.39 E-value=2.7e-12 Score=110.15 Aligned_cols=218 Identities=17% Similarity=0.123 Sum_probs=131.8
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCC-----ChhhHHHHHHHHh-hCCcEEEEEcCCCCCCCCCCcccCCcccH
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-----CRADANEAAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWHEK 119 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~-----~~~~~~~~~~~l~-~~g~~v~~~d~~g~G~S~~~~~~~~~~~~ 119 (284)
....+..++|.|...+.....|+|||+||+|. ....+..+...++ +.+..|+++|||=--+.. .+.. .
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~Pa~---y 143 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP---FPAA---Y 143 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC---CCcc---c
Confidence 44557778999997665468999999999984 2345777777764 559999999999533322 2222 5
Q ss_pred hHHHHHHHHHHhc------CCCCcEEEEEEehhHHHHHHHhccC-------CCccEEEEcCCccCHHHHHHHHHHHHccc
Q 023299 120 DDLKVVVSYLRGN------KQTSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLELVDVYKIR 186 (284)
Q Consensus 120 ~d~~~~i~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~lil~~~~~~~~~~~~~~~~~~~~~ 186 (284)
+|..+++.|+.++ ...++|+|+|-|.||++|..++.+. +++++.|++-|+....+......+.....
T Consensus 144 ~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~ 223 (336)
T KOG1515|consen 144 DDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNG 223 (336)
T ss_pred hHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcC
Confidence 7888888888775 2348999999999999998887652 34999999999876555433322222111
Q ss_pred CChhH--HHHHHHHHHhhhhc-cCCCCCCcHHHHHHHHHHhhh-hhhccCcccCCCCCCccc-cccchHHHhhhhccccc
Q 023299 187 LPKFT--MAVQYMRRVIQKKA-KFDIMDLNCLKSLLYEIITGL-RCASTDAASSSSAPPSIL-TAKPVDELLSEAVPIAS 261 (284)
Q Consensus 187 ~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~ 261 (284)
.+... .....++..+.... ..+....++............ ..+.+++..+.|.+.+.. ...+..+..+..+++++
T Consensus 224 ~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~ 303 (336)
T KOG1515|consen 224 SPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIH 303 (336)
T ss_pred CcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEE
Confidence 22222 22233343333333 222222222221110112223 334666677777777664 22222233444556667
Q ss_pred cccCccCC
Q 023299 262 KENSAVNE 269 (284)
Q Consensus 262 i~~~gH~~ 269 (284)
+++++|.+
T Consensus 304 ~e~~~H~~ 311 (336)
T KOG1515|consen 304 YEDGFHGF 311 (336)
T ss_pred ECCCeeEE
Confidence 89999954
No 94
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=7.7e-12 Score=118.84 Aligned_cols=206 Identities=17% Similarity=0.162 Sum_probs=140.9
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-------hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc-----cc
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-------DANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VS 113 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~-----~~ 113 (284)
+|....+...+|++..+.+.-|+++.+||++++.. .|..+ .....|+.|+.+|.||.|...... ..
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~ 583 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRN 583 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhh
Confidence 89999999999999888888999999999997332 23333 467789999999999998766442 22
Q ss_pred CCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCC-C-ccEEEEcCCccCHHHHHHHHHHHHcccCCh
Q 023299 114 LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDP-S-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK 189 (284)
Q Consensus 114 ~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p-~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 189 (284)
.|-.+++|...++.++.++..+ ++|.++|+|.||++++.++...| . ++|.|.++|.+++. .............|.
T Consensus 584 lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~terymg~p~ 662 (755)
T KOG2100|consen 584 LGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPS 662 (755)
T ss_pred cCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHhhcCCCc
Confidence 3434689999999999888644 79999999999999999999997 4 88889999999875 222111000011121
Q ss_pred hHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhh-ccCcccCCCCCCccccccchH-HHhhhh--ccccccccC
Q 023299 190 FTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCA-STDAASSSSAPPSILTAKPVD-ELLSEA--VPIASKENS 265 (284)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-~~~~~~--~~~~~i~~~ 265 (284)
... .. +.+... ..-+..++.+ .+.++|..|+.+..+....+. .+...+ ....++|+.
T Consensus 663 ~~~------------~~--y~e~~~-----~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde 723 (755)
T KOG2100|consen 663 END------------KG--YEESSV-----SSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDE 723 (755)
T ss_pred ccc------------ch--hhhccc-----cchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 110 00 000000 1123333333 488999999988777444444 443333 456788999
Q ss_pred ccCCCCCC
Q 023299 266 AVNEDEPS 273 (284)
Q Consensus 266 gH~~~~p~ 273 (284)
+|+...++
T Consensus 724 ~H~is~~~ 731 (755)
T KOG2100|consen 724 NHGISYVE 731 (755)
T ss_pred Cccccccc
Confidence 99987765
No 95
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.36 E-value=1.5e-12 Score=106.05 Aligned_cols=187 Identities=17% Similarity=0.123 Sum_probs=106.3
Q ss_pred EEEECCCCC---ChhhHHHHHHHHhh-CCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhc-----CCCCcEE
Q 023299 69 VVYCHGNSG---CRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN-----KQTSRIG 139 (284)
Q Consensus 69 vv~~HG~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~-----~~~~~i~ 139 (284)
||++||++. +......++..+++ .|+.|+.+|||-..+.. . ...++|+.++++|+.++ ...++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----F-PAALEDVKAAYRWLLKNADKLGIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----T-THHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----c-cccccccccceeeeccccccccccccceE
Confidence 799999984 44455666766665 89999999999532211 1 12289999999999998 4458999
Q ss_pred EEEEehhHHHHHHHhccC-----CCccEEEEcCCccCH-HH--HHHHHHHHHcccCChhH--HHHHHHHHHhhhhccCCC
Q 023299 140 LWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDL-FD--LMLELVDVYKIRLPKFT--MAVQYMRRVIQKKAKFDI 209 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~-----p~v~~lil~~~~~~~-~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 209 (284)
|+|+|.||.+|+.++... +.++++++++|..++ .. ......... ...+.+. ........... ....+.
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 152 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNEN-KDDPFLPAPKIDWFWKLYLP-GSDRDD 152 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHH-STTSSSBHHHHHHHHHHHHS-TGGTTS
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccc-cccccccccccccccccccc-cccccc
Confidence 999999999999998652 239999999998766 11 111000111 1112221 11222222222 111111
Q ss_pred CCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh---hhhccccccccCccCC
Q 023299 210 MDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL---SEAVPIASKENSAVNE 269 (284)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~ 269 (284)
...+++.. .+ .+. ..++.+..++.|.+.+. ...+.+.+ ...++++++++++|.+
T Consensus 153 ~~~sp~~~--~~-~~~-~Pp~~i~~g~~D~l~~~--~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 153 PLASPLNA--SD-LKG-LPPTLIIHGEDDVLVDD--SLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TTTSGGGS--SC-CTT-CHEEEEEEETTSTTHHH--HHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred cccccccc--cc-ccc-CCCeeeeccccccchHH--HHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 12222221 01 222 34667777777766543 33333333 3456778889999975
No 96
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.36 E-value=1.3e-11 Score=103.20 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=101.7
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcc
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH 117 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~ 117 (284)
++..+.+.||.+|.+.+.--.....+.++..||.+.|..|-.+. .++..-++.||.|+.++.||++.|.|.+....
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n-- 290 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN-- 290 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCccc--
Confidence 45677888999999854432211123457789999998875542 12333456799999999999999998766553
Q ss_pred cHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHH
Q 023299 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLF 173 (284)
Q Consensus 118 ~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~ 173 (284)
+...+.+++++..+.++. +.|+|+|.|.||+.++.+|..+|+|+++||.+.+-++-
T Consensus 291 ~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDll 348 (517)
T KOG1553|consen 291 TLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLL 348 (517)
T ss_pred chHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhh
Confidence 367777899999888765 89999999999999999999999999999999876553
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.34 E-value=6.4e-12 Score=105.18 Aligned_cols=203 Identities=22% Similarity=0.218 Sum_probs=85.5
Q ss_pred CccEEEEECCCCCCh---hhHHHHHHHHhhCCcEEEEEcCC----CCCCCCCCcccCCcccHhHHHHHHHHHHhcC----
Q 023299 65 PLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---- 133 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~----g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~---- 133 (284)
...+|||+.|.+... .....++..|.+.||.|+-+-++ |+|.++-+ ++++|+.++++|+++..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~------~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD------RDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH------HHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh------hHHHHHHHHHHHHHHhhcccc
Confidence 567899999998533 35678888887789999999876 33333211 24899999999998883
Q ss_pred CCCcEEEEEEehhHHHHHHHhccC------CCccEEEEcCCccCHHH---------HHHHHHHHHc----cc-----CCh
Q 023299 134 QTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFD---------LMLELVDVYK----IR-----LPK 189 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~lil~~~~~~~~~---------~~~~~~~~~~----~~-----~~~ 189 (284)
..++|+|+|||.|+.-+++|+.+. +.|+++||.+|.++-+. ........-. .. +|.
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~ 185 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPR 185 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeec
Confidence 458999999999999999998764 23999999999764211 1111111100 00 000
Q ss_pred -hHHH-----HHHHHHHhhhhcc---CCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccc-cccchHHHhhhhc--
Q 023299 190 -FTMA-----VQYMRRVIQKKAK---FDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSIL-TAKPVDELLSEAV-- 257 (284)
Q Consensus 190 -~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~-- 257 (284)
+... .-...|+...... -++...+-..+-+.+.+..+..|++++.++.|+.+|.. ..+++.+.+...+
T Consensus 186 ~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~ 265 (303)
T PF08538_consen 186 EFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNP 265 (303)
T ss_dssp --GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------
T ss_pred cccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccc
Confidence 0000 0001111111000 00000000012334567888889999999999988776 4445555543211
Q ss_pred -----cccccccCccCCCCCC
Q 023299 258 -----PIASKENSAVNEDEPS 273 (284)
Q Consensus 258 -----~~~~i~~~gH~~~~p~ 273 (284)
.-.+||||.|+..+++
T Consensus 266 ~~~s~~S~iI~GA~H~~~~~~ 286 (303)
T PF08538_consen 266 KIWSPLSGIIPGASHNVSGPS 286 (303)
T ss_dssp ---------------------
T ss_pred ccccccccccccccccccccc
Confidence 1347899999987665
No 98
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.33 E-value=1.3e-11 Score=106.79 Aligned_cols=212 Identities=16% Similarity=0.139 Sum_probs=127.7
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCC---ChhhH-HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~---~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~ 118 (284)
...++..+..++|.|. .......|+||++||++. ..... ..+...+...|+.|+.+|||--.+.. .. ..
T Consensus 57 ~~~~~~~~~~~~y~p~-~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p---~~ 129 (312)
T COG0657 57 AGPSGDGVPVRVYRPD-RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP---FP---AA 129 (312)
T ss_pred cCCCCCceeEEEECCC-CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC---CC---ch
Confidence 3445666778899982 223446899999999983 44444 34444566689999999999543321 11 12
Q ss_pred HhHHHHHHHHHHhcCC-----CCcEEEEEEehhHHHHHHHhccC-----CCccEEEEcCCccCHHHHHHHHHHHHcccCC
Q 023299 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~-----p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 188 (284)
.+|+.++++++.++.. .++|+++|+|.||.+++.++..- |..++.++++|..+... .......+.. .+
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~-~~ 207 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGE-AD 207 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCC-cc
Confidence 7899999999987732 48999999999999999887653 34899999999877665 1111111110 11
Q ss_pred hhH---HHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHh---hhhcccccc
Q 023299 189 KFT---MAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELL---SEAVPIASK 262 (284)
Q Consensus 189 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~i 262 (284)
.+. ....+.................++. .+.+.. ..|..++.++.|.+.+. ...+.+.+ ...+++..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~---~~~~~~-lPP~~i~~a~~D~l~~~--~~~~a~~L~~agv~~~~~~~ 281 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLA---SDDLSG-LPPTLIQTAEFDPLRDE--GEAYAERLRAAGVPVELRVY 281 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccc---cccccC-CCCEEEEecCCCcchhH--HHHHHHHHHHcCCeEEEEEe
Confidence 111 1111222222211111111122222 121444 56688888888888884 33333333 345567888
Q ss_pred ccCccCC
Q 023299 263 ENSAVNE 269 (284)
Q Consensus 263 ~~~gH~~ 269 (284)
++..|.+
T Consensus 282 ~g~~H~f 288 (312)
T COG0657 282 PGMIHGF 288 (312)
T ss_pred CCcceec
Confidence 9999965
No 99
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=2e-11 Score=114.69 Aligned_cols=111 Identities=21% Similarity=0.279 Sum_probs=80.6
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCC----------cccC-------------Ccc-cHh
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD----------YVSL-------------GWH-EKD 120 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~----------~~~~-------------~~~-~~~ 120 (284)
..|+||++||++++...|..++..|++.||.|+++|+||||.|... .... +++ .+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 4579999999999999999999999989999999999999999432 1111 222 156
Q ss_pred HHHHHHHHHH------hc------CCCCcEEEEEEehhHHHHHHHhccC------C------CccEEEEcCCccCHHHH
Q 023299 121 DLKVVVSYLR------GN------KQTSRIGLWGRSMGAVTSLLYGAED------P------SIAGMVLDSAFSDLFDL 175 (284)
Q Consensus 121 d~~~~i~~~~------~~------~~~~~i~l~G~S~Gg~~a~~~a~~~------p------~v~~lil~~~~~~~~~~ 175 (284)
|+..+...+. .. .+..+++++||||||.+++.++... | .+....+..|-..+...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgGgia~~ 606 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGGGIANF 606 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCccHHHH
Confidence 6666666665 22 2347999999999999999998742 1 14566666554444333
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.28 E-value=1e-11 Score=101.66 Aligned_cols=166 Identities=17% Similarity=0.103 Sum_probs=95.2
Q ss_pred CCCccEEEEECCCCCChhhHHHHHH-HHhhCCcEEEEEcCCC------CCCC--CC-C---cccCC---ccc----HhHH
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSG------SGLS--DG-D---YVSLG---WHE----KDDL 122 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~G~S--~~-~---~~~~~---~~~----~~d~ 122 (284)
++..++||++||.|.+.+.+..... .+......++.++.+. .|.. .+ + ..... ... .+.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 5678999999999999977766665 3334467788777652 1221 11 0 00000 011 2234
Q ss_pred HHHHHHHHhcC-CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHH
Q 023299 123 KVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRV 200 (284)
Q Consensus 123 ~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (284)
.++++...+.. +.++|+|.|+|+||++|+.++.++|. ++++|.+++..-... ...
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------------~~~--------- 147 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------------ELE--------- 147 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------------CCH---------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------------ccc---------
Confidence 44444443332 33899999999999999999999987 999999998642100 000
Q ss_pred hhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhh---hhccccccccCccCCC
Q 023299 201 IQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLS---EAVPIASKENSAVNED 270 (284)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~ 270 (284)
.........++...+|.+|++++.+..+...+.+. .++++.++++.||...
T Consensus 148 -------------------~~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~ 201 (216)
T PF02230_consen 148 -------------------DRPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS 201 (216)
T ss_dssp -------------------CCHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--
T ss_pred -------------------ccccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC
Confidence 00011115688899999999999886666666553 3567788899999765
No 101
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.27 E-value=8.4e-11 Score=93.32 Aligned_cols=222 Identities=11% Similarity=0.089 Sum_probs=135.2
Q ss_pred EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCccc---CCc
Q 023299 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS---LGW 116 (284)
Q Consensus 40 ~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~---~~~ 116 (284)
..+...||..+.+..| |+. ++...-++..-+.+-....+.+++..+++.||.|+.+|+||.|.|+..... ..+
T Consensus 8 ~~l~~~DG~~l~~~~~-pA~---~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~ 83 (281)
T COG4757 8 AHLPAPDGYSLPGQRF-PAD---GKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRY 83 (281)
T ss_pred cccccCCCccCccccc-cCC---CCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccch
Confidence 4566789999998655 442 222334444444555555788899999999999999999999999753222 333
Q ss_pred cc--HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHH-----HHHcc----
Q 023299 117 HE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV-----DVYKI---- 185 (284)
Q Consensus 117 ~~--~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~-----~~~~~---- 185 (284)
.+ ..|+.++++++.+..+-.+...+|||+||.+.-.+ ..+++..+....+....+...+.... ..+..
T Consensus 84 ~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~ 162 (281)
T COG4757 84 LDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL-GQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPP 162 (281)
T ss_pred hhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc-ccCcccceeeEeccccccccchhhhhcccceeeccccccc
Confidence 33 78999999999887766788999999999876644 34555443333322222211111100 01111
Q ss_pred ------cCCh--------hH-HHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchH
Q 023299 186 ------RLPK--------FT-MAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVD 250 (284)
Q Consensus 186 ------~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 250 (284)
..|+ ++ .....+.++.+... ....++.....++..+.+..|+..+...+|+.+|..+++.+.
T Consensus 163 lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~---y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~ 239 (281)
T COG4757 163 LTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPR---YYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFA 239 (281)
T ss_pred hhhccccCcHhhcCCCccCcchHHHHHHHHhcCcc---ccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHH
Confidence 1111 11 12223334433322 223344444456788889999999999999999998877777
Q ss_pred HHhhh-hcccccccc----CccCC
Q 023299 251 ELLSE-AVPIASKEN----SAVNE 269 (284)
Q Consensus 251 ~~~~~-~~~~~~i~~----~gH~~ 269 (284)
+.-.. ..+...++- -||+-
T Consensus 240 ~~y~nApl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 240 SFYRNAPLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HhhhcCcccceecCcccCcccchh
Confidence 65532 223344433 48853
No 102
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.27 E-value=3.5e-11 Score=108.36 Aligned_cols=135 Identities=19% Similarity=0.242 Sum_probs=108.8
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC--CC---hhhHHHHHH---HHhhCCcEEEEEcCCCCCC
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS--GC---RADANEAAV---ILLPSNITLFTLDFSGSGL 106 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~--~~---~~~~~~~~~---~l~~~g~~v~~~d~~g~G~ 106 (284)
|...++.+...||.+|+..+|.|++ .++.|+++..+-++ .. ......... .++.+||.|+..|.||.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 5566778888999999999999985 57889999999222 11 222233334 6888999999999999999
Q ss_pred CCCCcccCCcccHhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH
Q 023299 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (284)
Q Consensus 107 S~~~~~~~~~~~~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~ 172 (284)
|+|.......++++|-.+.|+|+.++... .+|+.+|.|++|...+.+|+..|. +++++..++..+.
T Consensus 94 SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 94 SEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred CCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 99987766555799999999999998433 899999999999999999887754 9999988877664
No 103
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.24 E-value=1.4e-10 Score=95.46 Aligned_cols=110 Identities=17% Similarity=0.212 Sum_probs=87.0
Q ss_pred EEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHh
Q 023299 52 CSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG 131 (284)
Q Consensus 52 ~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~ 131 (284)
..++.|++ .+..|+|||+||+......+..+++++++.||.|+.+|+...+... ...+.+++.++++|+.+
T Consensus 6 l~v~~P~~---~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~------~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPSS---AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD------DTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecCC---CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC------cchhHHHHHHHHHHHHh
Confidence 35777875 5679999999999977778899999999999999999976533211 11236788888888766
Q ss_pred cC----------CCCcEEEEEEehhHHHHHHHhccC-----C-CccEEEEcCCcc
Q 023299 132 NK----------QTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFS 170 (284)
Q Consensus 132 ~~----------~~~~i~l~G~S~Gg~~a~~~a~~~-----p-~v~~lil~~~~~ 170 (284)
.+ ..+++.|.|||.||-+|+.++..+ + .++++|+++|.-
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 32 226899999999999999888876 2 399999999986
No 104
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.23 E-value=1.8e-10 Score=93.40 Aligned_cols=119 Identities=20% Similarity=0.234 Sum_probs=86.0
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHH--HHHHh-hCCcEEEEEcCCCCCCCC--CC----cccCCcccHh
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVILL-PSNITLFTLDFSGSGLSD--GD----YVSLGWHEKD 120 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~--~~~l~-~~g~~v~~~d~~g~G~S~--~~----~~~~~~~~~~ 120 (284)
|.|.+|+|+..+ .++.|+||++||.+++.+.+... ...++ +.||.|+.++........ +. ....+..+..
T Consensus 1 l~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 467899998654 34679999999999988866442 12344 459999988864321111 11 1111223466
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 121 d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
.+.++++++.+++.+ +||.+.|+|.||+++..++..+|+ ++++.+.++.
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 788889999888766 799999999999999999999999 8888877764
No 105
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.14 E-value=4.6e-10 Score=92.61 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=74.1
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhC--CcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEE
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~ 143 (284)
.|+++++||++++...|......+... .|.|+.+|+||||.|. .. ... .....+.+..+.+..+..+++++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYS---LSAYADDLAALLDALGLEKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc-ccc---HHHHHHHHHHHHHHhCCCceEEEEe
Confidence 458999999999999887743333332 1999999999999997 11 111 1222334444444446677999999
Q ss_pred ehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 144 S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
||||.+++.++..+|+ ++++|++++..
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCC
Confidence 9999999999999998 99999998654
No 106
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.12 E-value=1.1e-10 Score=91.04 Aligned_cols=202 Identities=14% Similarity=0.123 Sum_probs=133.0
Q ss_pred hcCCcEEEEE-EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC---CChhhHHHHHHHHhhCCcEEEEEcCCCCC
Q 023299 30 LAGRSYKRQD-LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSNITLFTLDFSGSG 105 (284)
Q Consensus 30 ~~~~~~~~~~-~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~g~G 105 (284)
+.+++.++++ +.+- .+|.++ ...|.|. ...++.||+||+. ++.......+.-+.++||+|..+++ +
T Consensus 37 Lkn~~i~r~e~l~Yg-~~g~q~-VDIwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~ 106 (270)
T KOG4627|consen 37 LKNKQIIRVEHLRYG-EGGRQL-VDIWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---N 106 (270)
T ss_pred hhhccccchhccccC-CCCceE-EEEecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---C
Confidence 4445555554 4443 344332 2477764 3689999999986 4555556666667788999999876 3
Q ss_pred CCCCCcccCCcccHhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccC--CCccEEEEcCCccCHHHHHHHHH-H
Q 023299 106 LSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED--PSIAGMVLDSAFSDLFDLMLELV-D 181 (284)
Q Consensus 106 ~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~--p~v~~lil~~~~~~~~~~~~~~~-~ 181 (284)
.+.....- -+.+.++...++++.+.++. .++.+-|||.|+.+|+.+..+. |.|.++++.|+..++.+...... .
T Consensus 107 l~~q~htL--~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~ 184 (270)
T KOG4627|consen 107 LCPQVHTL--EQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGN 184 (270)
T ss_pred cCcccccH--HHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccc
Confidence 34322110 02378888899999988776 7789999999999999998764 55999999999988776543211 1
Q ss_pred HHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHH-HHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcccc
Q 023299 182 VYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLK-SLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIA 260 (284)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 260 (284)
..+ + .-...+... .+ .....++.+.+++++.++..--++.-+.+..++.+ +.+.
T Consensus 185 dlg-----L-----------------t~~~ae~~Scdl--~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~ 239 (270)
T KOG4627|consen 185 DLG-----L-----------------TERNAESVSCDL--WEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFT 239 (270)
T ss_pred ccC-----c-----------------ccchhhhcCccH--HHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-ccee
Confidence 111 0 000000000 12 24566777888888888877767666666666654 6788
Q ss_pred ccccCccC
Q 023299 261 SKENSAVN 268 (284)
Q Consensus 261 ~i~~~gH~ 268 (284)
.++|.+|-
T Consensus 240 ~f~n~~hy 247 (270)
T KOG4627|consen 240 LFKNYDHY 247 (270)
T ss_pred ecCCcchh
Confidence 89999994
No 107
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.12 E-value=1.2e-10 Score=91.27 Aligned_cols=148 Identities=20% Similarity=0.158 Sum_probs=89.0
Q ss_pred EEEECCCCCChh-hHHHHH-HHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCC--CCcEEEEEEe
Q 023299 69 VVYCHGNSGCRA-DANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRS 144 (284)
Q Consensus 69 vv~~HG~~~~~~-~~~~~~-~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~--~~~i~l~G~S 144 (284)
|+++||++++.. .|.... +.+.+. +.|..+++- .-++.++++.+.+... .++++|+|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------~P~~~~W~~~l~~~i~~~~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------NPDLDEWVQALDQAIDAIDEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------S--HHHHHHHHHHCCHC-TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------CCCHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 789999998766 455544 456554 677766651 1234555555555533 2679999999
Q ss_pred hhHHHHHHHhc-cCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHH
Q 023299 145 MGAVTSLLYGA-EDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEI 222 (284)
Q Consensus 145 ~Gg~~a~~~a~-~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
+|+..++.+++ ..+. |++++|++|+..-.. ....+.+ ..+....
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~---------~~~~~~~--------------~~f~~~p----------- 109 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDP---------EPFPPEL--------------DGFTPLP----------- 109 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCH---------HCCTCGG--------------CCCTTSH-----------
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCcccc---------cchhhhc--------------cccccCc-----------
Confidence 99999999994 4443 999999999854200 0001111 1111000
Q ss_pred HhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 223 ITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
...+..+..++.+.+|++++.+...++.+.+. ++++.++++||..
T Consensus 110 ~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 110 RDPLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFN 154 (171)
T ss_dssp CCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSS
T ss_pred ccccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcc
Confidence 12233445788999999999988888888874 6899999999955
No 108
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.11 E-value=3.9e-09 Score=89.02 Aligned_cols=138 Identities=20% Similarity=0.299 Sum_probs=99.5
Q ss_pred EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhH-------HHHHHHHhhCCcEEEEEcCCCCCCCC
Q 023299 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NEAAVILLPSNITLFTLDFSGSGLSD 108 (284)
Q Consensus 36 ~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~g~G~S~ 108 (284)
...++.++. |+.++.+.... .++.++...||++-|+++..+.. ..+.+.....|.+|+.++|||.|.|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~---~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~ 186 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIH---QPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST 186 (365)
T ss_pred ceeeEEEee-CCEEEEEEEee---CCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC
Confidence 345566664 99999986654 12345778999999999877751 12333334468999999999999999
Q ss_pred CCcccCCcccHhHHHHHHHHHHhcC-C--CCcEEEEEEehhHHHHHHHhccCC----C-ccE-EEEcCCccCHHHHHHHH
Q 023299 109 GDYVSLGWHEKDDLKVVVSYLRGNK-Q--TSRIGLWGRSMGAVTSLLYGAEDP----S-IAG-MVLDSAFSDLFDLMLEL 179 (284)
Q Consensus 109 ~~~~~~~~~~~~d~~~~i~~~~~~~-~--~~~i~l~G~S~Gg~~a~~~a~~~p----~-v~~-lil~~~~~~~~~~~~~~ 179 (284)
|..... ....|.++.++|++++. + .++|++.|||+||.++..++.++. + ++- +|-.-++.++...+...
T Consensus 187 G~~s~~--dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~ 264 (365)
T PF05677_consen 187 GPPSRK--DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQF 264 (365)
T ss_pred CCCCHH--HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHH
Confidence 877532 22889999999998743 3 389999999999999998766643 2 553 44557888887766543
No 109
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=8.2e-10 Score=89.48 Aligned_cols=116 Identities=14% Similarity=0.130 Sum_probs=92.4
Q ss_pred cEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHH
Q 023299 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS 127 (284)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~ 127 (284)
.......+.|.. ++.-|+|+|+||+.-..+.|..+..++++.||.|+++++-.. .. ..+..+++++.++++
T Consensus 31 pPkpLlI~tP~~---~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~----p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 31 PPKPLLIVTPSE---AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FP----PDGQDEIKSAASVIN 101 (307)
T ss_pred CCCCeEEecCCc---CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cC----CCchHHHHHHHHHHH
Confidence 445666777764 678999999999999999999999999999999999998642 11 223345888999999
Q ss_pred HHHhcC----------CCCcEEEEEEehhHHHHHHHhccCC-C--ccEEEEcCCccCH
Q 023299 128 YLRGNK----------QTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSDL 172 (284)
Q Consensus 128 ~~~~~~----------~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~lil~~~~~~~ 172 (284)
|+.+.+ ...+++++|||.||-.|..+|..+. + +.+||-+.|....
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 997653 1268999999999999999998773 3 8899998887543
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=99.10 E-value=2.5e-10 Score=91.65 Aligned_cols=164 Identities=22% Similarity=0.185 Sum_probs=107.8
Q ss_pred CCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC--CCCCC--CcccCCcc------cHhHHHHHHHHHHh
Q 023299 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLSDG--DYVSLGWH------EKDDLKVVVSYLRG 131 (284)
Q Consensus 62 ~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--G~S~~--~~~~~~~~------~~~d~~~~i~~~~~ 131 (284)
+++..|+||++||.|++..++..+...+... +.++.+.-+=. |.-.. ......+. ....+.+.+..+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3556789999999999999888876666543 55554332210 10000 00011111 14445566666666
Q ss_pred cCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCC
Q 023299 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFD 208 (284)
Q Consensus 132 ~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (284)
+++. ++++++|+|.||++++.+..++|. ++++|+.+|..-....
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 6666 899999999999999999999997 9999988876422110
Q ss_pred CCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhh---hccccccccCccCCCCC
Q 023299 209 IMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSE---AVPIASKENSAVNEDEP 272 (284)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~p 272 (284)
.....-..++++.+|..|.+++.....++.+.+.. +++..+++ .||.....
T Consensus 140 ------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e 193 (207)
T COG0400 140 ------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPE 193 (207)
T ss_pred ------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHH
Confidence 00112346888999999999999877777777643 44556666 89976443
No 111
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.10 E-value=1.2e-09 Score=81.96 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=112.9
Q ss_pred CCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCC----CCcccCCcccHhHHHHHHHHHHhcCCCCc
Q 023299 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSD----GDYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~----~~~~~~~~~~~~d~~~~i~~~~~~~~~~~ 137 (284)
....+||+.||.+++.+ .+...+..|+.+|+.|..++++-.-... .++...+. .......++..++......+
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t-~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGT-LNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcccc-CCHHHHHHHHHHHhcccCCc
Confidence 45678999999998766 5788889999999999999998542211 12222211 13445556666766655579
Q ss_pred EEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHH
Q 023299 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLK 216 (284)
Q Consensus 138 i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (284)
.++-|+||||-++..++..... |.++++.+-.. ..|.-+ +
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPf---------------hppGKP------------------------e 131 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPF---------------HPPGKP------------------------E 131 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCcc---------------CCCCCc------------------------c
Confidence 9999999999999888876543 89988765221 011111 0
Q ss_pred HHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 217 SLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
+...+-+..++.|.++.++..|.+-+-..+... .+.+..+++++++++|.+
T Consensus 132 ~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDL 182 (213)
T COG3571 132 QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDL 182 (213)
T ss_pred cchhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCcccc
Confidence 112345778999999999999998877544222 235668899999999976
No 112
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.09 E-value=1.3e-09 Score=98.84 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=90.2
Q ss_pred EEEEEEEecCCCCCCCCccEEEEECCCCCChhhH-----HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc-HhHH
Q 023299 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (284)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~ 122 (284)
.+..+.|.|.. +...+.+||+++.+-.....+ ..+++.|.++|+.|+.+|+++=+... ...++.+ ++.+
T Consensus 200 l~eLiqY~P~t--e~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i 274 (560)
T TIGR01839 200 VLELIQYKPIT--EQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDAL 274 (560)
T ss_pred ceEEEEeCCCC--CCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHH
Confidence 34555777753 234578899999987443333 67889999999999999998755443 2233333 5688
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHH----HhccCCC--ccEEEEcCCccCHH
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLL----YGAEDPS--IAGMVLDSAFSDLF 173 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~p~--v~~lil~~~~~~~~ 173 (284)
.++++.+++..+.+++.++|+||||.+++. +++.+++ |+.++++++..++.
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 899999988888899999999999999986 6777763 99999888765543
No 113
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.08 E-value=1.1e-09 Score=104.56 Aligned_cols=93 Identities=17% Similarity=0.298 Sum_probs=78.5
Q ss_pred HHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcC--------------C--CCcEEEEEEehhH
Q 023299 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK--------------Q--TSRIGLWGRSMGA 147 (284)
Q Consensus 84 ~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~--------------~--~~~i~l~G~S~Gg 147 (284)
.+.+.|+.+||.|+..|.||.|.|+|.....+..+.+|..++|+|+..+. + ..+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 45578899999999999999999999876665667899999999998431 2 2799999999999
Q ss_pred HHHHHHhccCCC-ccEEEEcCCccCHHHHH
Q 023299 148 VTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (284)
Q Consensus 148 ~~a~~~a~~~p~-v~~lil~~~~~~~~~~~ 176 (284)
.+++.+|+..|. ++++|.+++.+++.+..
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~y 379 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYY 379 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHh
Confidence 999999887765 99999999998876643
No 114
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.06 E-value=4e-09 Score=85.14 Aligned_cols=186 Identities=13% Similarity=0.119 Sum_probs=116.2
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcC----CCCcEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK----QTSRIG 139 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~----~~~~i~ 139 (284)
....-++.+|=.||+...+..+...+.. .+.++.+.+||+|.--+.+. ..|+.++++.+.... ...+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~------~~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPL------LTDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcc------cccHHHHHHHHHHHhccccCCCCee
Confidence 3566788888888888888777776653 58899999999987654433 234444444443332 236899
Q ss_pred EEEEehhHHHHHHHhccCCC----ccEEEEcCCccC------------HHHHHHHHHHHHcccCChhH-------HHHHH
Q 023299 140 LWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD------------LFDLMLELVDVYKIRLPKFT-------MAVQY 196 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p~----v~~lil~~~~~~------------~~~~~~~~~~~~~~~~~~~~-------~~~~~ 196 (284)
++||||||++|..+|.+..+ +.++.+.++... -.+.+..... +.-..+.+- .+...
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~-lgG~p~e~led~El~~l~LPi 156 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVD-LGGTPPELLEDPELMALFLPI 156 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHH-hCCCChHHhcCHHHHHHHHHH
Confidence 99999999999999987532 677777654221 0112222222 221111221 11111
Q ss_pred HHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 197 MRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
++.-++.-..|.... -..+.+++..+.|.+|..++...+..+.+......++..++| ||.+
T Consensus 157 lRAD~~~~e~Y~~~~-----------~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFf 217 (244)
T COG3208 157 LRADFRALESYRYPP-----------PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFF 217 (244)
T ss_pred HHHHHHHhcccccCC-----------CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-ccee
Confidence 222222222222211 245778999999999999999888889888887888888876 8865
No 115
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.06 E-value=1.9e-09 Score=88.36 Aligned_cols=103 Identities=20% Similarity=0.215 Sum_probs=72.2
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhh--------CCcEEEEEcCCCCCCCC-CCcccCCcccHhHHHHHHHHHHhcC--
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLP--------SNITLFTLDFSGSGLSD-GDYVSLGWHEKDDLKVVVSYLRGNK-- 133 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~G~S~-~~~~~~~~~~~~d~~~~i~~~~~~~-- 133 (284)
.+.+|||+||.+|+...+..++..+.+ ..+.++++|+......- +.... ...+.+.++++.+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~---~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQ---RQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHH---HHHHHHHHHHHHHHHhhhh
Confidence 457899999999998888777765522 25889999987542111 11100 12455667777776665
Q ss_pred ---CCCcEEEEEEehhHHHHHHHhccCC----CccEEEEcCCcc
Q 023299 134 ---QTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (284)
Q Consensus 134 ---~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~lil~~~~~ 170 (284)
+.++|+|+||||||.+|..++...+ .++.+|..+.+.
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4589999999999999988876543 289999887653
No 116
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.05 E-value=2.6e-09 Score=91.08 Aligned_cols=121 Identities=13% Similarity=0.108 Sum_probs=84.7
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-----------HHHHH---HHHhhCCcEEEEEcCCCCC-CCCCC
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----------ANEAA---VILLPSNITLFTLDFSGSG-LSDGD 110 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~g~G-~S~~~ 110 (284)
+...|.+..|.-.+ ....++|+++|+..|+... |..++ ..+....|-|++.|-.|.+ .|.++
T Consensus 34 ~~~~vay~T~Gtln---~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTLN---AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEeccccc---ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 34556665555433 2356799999999985542 22222 1233446999999999986 33332
Q ss_pred ----cc----cC--CcccHhHHHHHHHHHHhcCCCCcEE-EEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 111 ----YV----SL--GWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 111 ----~~----~~--~~~~~~d~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
+. .. ....++|+..+-+.+.+.++++++. ++|-||||+.++..+..+|+ ++.+|.+++.
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 11 01 1123788888888888999998876 99999999999999999998 8887777654
No 117
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.04 E-value=4.7e-09 Score=88.39 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=77.8
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhC---CcEEEEEcCCCCCCCCCCc----ccCCcccHhHH---HHHHHHHHhcC--
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSDGDY----VSLGWHEKDDL---KVVVSYLRGNK-- 133 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~G~S~~~~----~~~~~~~~~d~---~~~i~~~~~~~-- 133 (284)
+..+|++.|++|-.+-|..++..|.++ .+.|++....||-.+.... ....+...+++ .+.++.+....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 468999999999999999999888754 8999999999997665431 11112223333 34444444433
Q ss_pred CCCcEEEEEEehhHHHHHHHhccCC----CccEEEEcCCc
Q 023299 134 QTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAF 169 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~lil~~~~ 169 (284)
+..+++|+|||+|+++++.++.+.+ +|.++++..|.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 3488999999999999999999988 38899888774
No 118
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.99 E-value=6e-09 Score=82.65 Aligned_cols=167 Identities=12% Similarity=0.102 Sum_probs=96.6
Q ss_pred EEEECCCCCChhhHH--HHHHHHhhCC--cEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEe
Q 023299 69 VVYCHGNSGCRADAN--EAAVILLPSN--ITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 69 vv~~HG~~~~~~~~~--~~~~~l~~~g--~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S 144 (284)
+|++||+.++..+.. .+.+.+.+.+ ..+.+++++.+ ...+.+.+..+.+....+.++|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999998777543 3445566554 55666666421 24444455555555455669999999
Q ss_pred hhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCc--HHHHHHHHH
Q 023299 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLN--CLKSLLYEI 222 (284)
Q Consensus 145 ~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 222 (284)
|||+.|..++.+++ +++ ||++|.......+...+..... +. . ...+.+.+.. .++.+- ..
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~--~~-~------------~e~~~~~~~~~~~l~~l~-~~ 129 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTN--PY-T------------GESYELTEEHIEELKALE-VP 129 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCcccc--CC-C------------CccceechHhhhhcceEe-cc
Confidence 99999999998886 555 8889988877766654432110 00 0 0011110000 000000 00
Q ss_pred HhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCC
Q 023299 223 ITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDE 271 (284)
Q Consensus 223 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 271 (284)
......+..++.+..|++.+.. +... ... +...++.+|.+|.+.+
T Consensus 130 ~~~~~~~~lvll~~~DEvLd~~--~a~~-~~~-~~~~~i~~ggdH~f~~ 174 (187)
T PF05728_consen 130 YPTNPERYLVLLQTGDEVLDYR--EAVA-KYR-GCAQIIEEGGDHSFQD 174 (187)
T ss_pred ccCCCccEEEEEecCCcccCHH--HHHH-Hhc-CceEEEEeCCCCCCcc
Confidence 0122456777888999999883 2222 222 3444556888997754
No 119
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.98 E-value=7.8e-09 Score=85.45 Aligned_cols=130 Identities=19% Similarity=0.154 Sum_probs=94.1
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHH--HHHh-hCCcEEEEEcC-CCCC------CC
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA--VILL-PSNITLFTLDF-SGSG------LS 107 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~-~g~G------~S 107 (284)
+...+. .+|.+.++++|.|...++ +.|+||++||..++..-+.... +.++ ..||-|+.+|- +++. .+
T Consensus 36 ~~~s~~-~~g~~r~y~l~vP~g~~~--~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 36 SVASFD-VNGLKRSYRLYVPPGLPS--GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred Cccccc-cCCCccceEEEcCCCCCC--CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 344454 589999999999987653 4599999999998887554443 3444 35999998843 2222 22
Q ss_pred CCCcc-cCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 108 DGDYV-SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 108 ~~~~~-~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
.++.. ..+..++..+.+++..+..++.+ ++|++.|.|-||.++..++..+|+ +.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11111 23344578889999999999887 599999999999999999999998 67766665543
No 120
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.91 E-value=8.8e-09 Score=84.85 Aligned_cols=123 Identities=19% Similarity=0.202 Sum_probs=81.4
Q ss_pred CCCcEEEEEEEecCCCCCCCCc-cEEEEECCCCCChhhHHHHH-H-------HHhhCCcEEEEEcCCC-CCCCCCCcccC
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPL-PCVVYCHGNSGCRADANEAA-V-------ILLPSNITLFTLDFSG-SGLSDGDYVSL 114 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~-~~vv~~HG~~~~~~~~~~~~-~-------~l~~~g~~v~~~d~~g-~G~S~~~~~~~ 114 (284)
..|.+|.+.+|.|..+.+++.. |.|||+||.+..+.+-.... + ..-+.++=|+++.+-- +-.++. ...
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~--~t~ 246 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE--KTL 246 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc--ccc
Confidence 5789999999999887777766 99999999997666432221 1 1112234455554311 011111 001
Q ss_pred CcccHhHHHHHHH-HHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 115 GWHEKDDLKVVVS-YLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 115 ~~~~~~d~~~~i~-~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
. ......++++ .+.+++.+ .||.+.|.|+||+-++.++.++|+ +++.+++|+--+
T Consensus 247 ~--~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 247 L--YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred h--hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 0 0233444444 66677666 799999999999999999999999 999999887643
No 121
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.89 E-value=1.2e-08 Score=84.05 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=72.3
Q ss_pred cEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHH-HHHHHHHHhcCCCCcEEEEEEeh
Q 023299 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL-KVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~-~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
++|+++|+.+|+...|..+++.+....+.|+.+.++|.+... ....+ ++++ ...++.+++..+..++.|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~--~~~~s---i~~la~~y~~~I~~~~~~gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE--PPPDS---IEELASRYAEAIRARQPEGPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS--HEESS---HHHHHHHHHHHHHHHTSSSSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC--CCCCC---HHHHHHHHHHHhhhhCCCCCeeehccCc
Confidence 369999999999999999999997545999999999987222 22222 3333 33445555544446999999999
Q ss_pred hHHHHHHHhccC---C-CccEEEEcCCc
Q 023299 146 GAVTSLLYGAED---P-SIAGMVLDSAF 169 (284)
Q Consensus 146 Gg~~a~~~a~~~---p-~v~~lil~~~~ 169 (284)
||.+|+.+|.+. . .+..++++++.
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 999999998763 2 38899888754
No 122
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.87 E-value=1.1e-07 Score=83.85 Aligned_cols=135 Identities=19% Similarity=0.145 Sum_probs=82.9
Q ss_pred hcCCcE-EEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-HHHHHHHHhhCCcEEEEEcCCCCCCC
Q 023299 30 LAGRSY-KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLS 107 (284)
Q Consensus 30 ~~~~~~-~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~S 107 (284)
+.|+.. ..|++.+.. +-.+| ++|.|.........|+||++--+.++... ...+++.|.. |+.|+..|+..-+..
T Consensus 68 ~~~~~~~v~e~vV~~~-~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~v 143 (406)
T TIGR01849 68 VDGKDVPIRERVVWDK-PFCRL--IHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMV 143 (406)
T ss_pred ECCEEeeeEEEEEEEC-CCeEE--EEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCC
Confidence 445443 344454543 33344 46666531111124789999998877765 4567788888 999999999765533
Q ss_pred CCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC-----CC-ccEEEEcCCccCH
Q 023299 108 DGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----PS-IAGMVLDSAFSDL 172 (284)
Q Consensus 108 ~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~lil~~~~~~~ 172 (284)
.......++ +|..+.+..+.+..+.+ +.++|+|+||..++.+++.. |. ++.+++++++.+.
T Consensus 144 p~~~~~f~l---dDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 144 PLSAGKFDL---EDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred chhcCCCCH---HHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 222223333 33333333333333556 99999999999876555443 44 9999999886654
No 123
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.87 E-value=6.2e-08 Score=80.69 Aligned_cols=134 Identities=11% Similarity=0.170 Sum_probs=78.7
Q ss_pred EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-HHHHH-----HHHhhCCcEEEEEcCCCCCCCCCC-ccc
Q 023299 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAA-----VILLPSNITLFTLDFSGSGLSDGD-YVS 113 (284)
Q Consensus 41 ~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~g~G~S~~~-~~~ 113 (284)
.+++.-| .++...+... ++++|++|-.|..|-+..+ +..+. +.+. ..+.++-+|.||+..-... +..
T Consensus 3 ~v~t~~G-~v~V~v~G~~----~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDP----KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp EEEETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT
T ss_pred eeccCce-EEEEEEEecC----CCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccccccc
Confidence 3455556 5776666532 2369999999999988776 55543 2333 5799999999999653321 222
Q ss_pred CCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc---CHHHHHHHHH
Q 023299 114 LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS---DLFDLMLELV 180 (284)
Q Consensus 114 ~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~---~~~~~~~~~~ 180 (284)
+.+-..+++.+.+..+.+.++.+.++-+|.-.||+|..++|..+|+ +.++||+++.. ++.+.....+
T Consensus 77 y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~ 147 (283)
T PF03096_consen 77 YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKL 147 (283)
T ss_dssp -----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHH
Confidence 2222345555555555555589999999999999999999999998 99999998864 4444444333
No 124
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.85 E-value=3.4e-08 Score=83.82 Aligned_cols=120 Identities=16% Similarity=0.219 Sum_probs=100.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhC---------CcEEEEEcCCCCCCCCCCcccCC
Q 023299 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS---------NITLFTLDFSGSGLSDGDYVSLG 115 (284)
Q Consensus 45 ~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~g~G~S~~~~~~~~ 115 (284)
..|.++|..+..|.+.+..+...+++++||++|+-.++..++..|.+- -|.|+++.++|+|-|+++... |
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~-G 209 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT-G 209 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC-C
Confidence 479999999999887655566678999999999999999999888654 389999999999999865332 2
Q ss_pred cccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEc
Q 023299 116 WHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLD 166 (284)
Q Consensus 116 ~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~ 166 (284)
+. +..+..+++-++-+++..+..+-|--+|+.|+..+|..+|+ |.++=+.
T Consensus 210 Fn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 210 FN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred cc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 22 67777888888888899999999999999999999999997 7776554
No 125
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.85 E-value=1.5e-08 Score=80.31 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=115.1
Q ss_pred cEEEEECCCCCChh-hHHHHHHHHhhCCcEEEEEcCCCCC--CCCC-Cccc-------CCcc-cHhHHHHHHHHHHhcCC
Q 023299 67 PCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSG--LSDG-DYVS-------LGWH-EKDDLKVVVSYLRGNKQ 134 (284)
Q Consensus 67 ~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G--~S~~-~~~~-------~~~~-~~~d~~~~i~~~~~~~~ 134 (284)
.+||++.-..|... .....+..++..||.|+.+|+.. | .|.. +... .++. ...++..++++++.+..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 57777777666555 47888999999999999999863 3 1211 1110 1111 16789999999998866
Q ss_pred CCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCc-cCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCc
Q 023299 135 TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF-SDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLN 213 (284)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (284)
..+|+++|.++||.++..+....+.+.+++..-|. .+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d------------------------------------------ 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVD------------------------------------------ 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchhheeeeEecCCcCC------------------------------------------
Confidence 79999999999999999888888887777764332 11
Q ss_pred HHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhcc----ccccccCccCC
Q 023299 214 CLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVP----IASKENSAVNE 269 (284)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~----~~~i~~~gH~~ 269 (284)
..-...+++|+++++++.|..+++..++.+.+.+.++.. +.++++-+|++
T Consensus 157 ------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf 210 (242)
T KOG3043|consen 157 ------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGF 210 (242)
T ss_pred ------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchh
Confidence 123566889999999999999999988888888865443 77889999965
No 126
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.84 E-value=5.7e-07 Score=74.33 Aligned_cols=127 Identities=16% Similarity=0.178 Sum_probs=91.1
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh-HHHHH-----HHHhhCCcEEEEEcCCCCCCCCC-C
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAA-----VILLPSNITLFTLDFSGSGLSDG-D 110 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~g~G~S~~-~ 110 (284)
++..+.+.-| .++...+.-. ++++|++|-.|..+-+... +..+. ..+.++ |.++-+|.|||-.-.. -
T Consensus 23 ~e~~V~T~~G-~v~V~V~Gd~----~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 23 QEHDVETAHG-VVHVTVYGDP----KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred eeeeeccccc-cEEEEEecCC----CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccC
Confidence 3445555556 4666566532 2368999999999987775 55443 345555 9999999999943321 1
Q ss_pred cccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 111 YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 111 ~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
+.++.+-..+++.+.|-.+.+.++.+.++-+|.-.|++|..++|..+|+ |-++||+++..
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 2222233366666666666666689999999999999999999999998 99999997654
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.83 E-value=8.7e-09 Score=90.88 Aligned_cols=107 Identities=22% Similarity=0.357 Sum_probs=65.4
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCC------CCC---cc-------c-----C-------C
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS------DGD---YV-------S-----L-------G 115 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S------~~~---~~-------~-----~-------~ 115 (284)
+..|+|||=||.+++...+..++..|+++||.|++++.|..-.+ ++. .. . . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 56899999999999999999999999999999999999953111 000 00 0 0 0
Q ss_pred c--c------cHhHHHHHHHHHHh----------------------cCCCCcEEEEEEehhHHHHHHHhccCCCccEEEE
Q 023299 116 W--H------EKDDLKVVVSYLRG----------------------NKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVL 165 (284)
Q Consensus 116 ~--~------~~~d~~~~i~~~~~----------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil 165 (284)
+ + ...++..+++.+.+ +...++|+++|||+||+.++..+.....+++.|+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~ 257 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEE
Confidence 0 0 03356666666642 0113689999999999999999888888999998
Q ss_pred cCCcc
Q 023299 166 DSAFS 170 (284)
Q Consensus 166 ~~~~~ 170 (284)
..|..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 88764
No 128
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.82 E-value=1.8e-08 Score=84.28 Aligned_cols=127 Identities=20% Similarity=0.266 Sum_probs=81.3
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh--HHHHHHHHhhCC----cEEEEEcCCCCCCCCC--C-------
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSN----ITLFTLDFSGSGLSDG--D------- 110 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~g----~~v~~~d~~g~G~S~~--~------- 110 (284)
-|.....++|+|.++.+.+.-|+|+++||....... ....+..+...| ..+++++.-+.+.... .
T Consensus 4 Lg~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 4 LGRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TTEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred cCCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccc
Confidence 367788889999986667789999999997322222 223333333332 4556666654441111 0
Q ss_pred -cccCCccc--HhH-HHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH
Q 023299 111 -YVSLGWHE--KDD-LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (284)
Q Consensus 111 -~~~~~~~~--~~d-~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~ 172 (284)
....+... .+. ..+++.++.+++.. .+..|.|+||||..|+.++.++|+ +.+++..||..+.
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 01111111 111 34566777777665 338999999999999999999998 9999999987443
No 129
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.80 E-value=1.6e-10 Score=94.12 Aligned_cols=153 Identities=16% Similarity=0.184 Sum_probs=78.7
Q ss_pred HhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHH
Q 023299 119 KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQY 196 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (284)
++-.+.+++||.++..+ ++|+|+|.|.||-+|+.+|+.+|.|+++|.++|..-......... .....+|.++.....
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~-~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYR-DSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEET-TE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhccc-CCCccCCcCCcChhh
Confidence 46788999999999766 699999999999999999999999999999987543221000000 000011211100000
Q ss_pred H----HHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccc-cccchHHHhhh-----hccccccccCc
Q 023299 197 M----RRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSIL-TAKPVDELLSE-----AVPIASKENSA 266 (284)
Q Consensus 197 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-----~~~~~~i~~~g 266 (284)
. .........+.........+.. --+++++++++.++|++|...+.. .++.+.+.+.. ..+++.+++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~-IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aG 160 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEAR-IPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAG 160 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB---GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-
T ss_pred ceecCCcceehhhhhhccccccccccc-ccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCC
Confidence 0 0000000111111111111111 126778999999999999987776 44444443321 35677889999
Q ss_pred cCCCCCC
Q 023299 267 VNEDEPS 273 (284)
Q Consensus 267 H~~~~p~ 273 (284)
|..+.|-
T Consensus 161 H~i~~Py 167 (213)
T PF08840_consen 161 HLIEPPY 167 (213)
T ss_dssp S---STT
T ss_pred ceecCCC
Confidence 9987664
No 130
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.79 E-value=2e-08 Score=78.53 Aligned_cols=101 Identities=22% Similarity=0.191 Sum_probs=84.0
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
...+||+.|=+|....-..++..|+++|+.|+.+|.+-+=-+...+.. ...|+..++++..++.+..+++|+|+|+
T Consensus 2 Dt~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~----~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 2 DTLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQ----TAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred CEEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHH----HHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 357999999999887777899999999999999998755334433332 2789999999999998889999999999
Q ss_pred hHHHHHHHhccCCC-----ccEEEEcCCcc
Q 023299 146 GAVTSLLYGAEDPS-----IAGMVLDSAFS 170 (284)
Q Consensus 146 Gg~~a~~~a~~~p~-----v~~lil~~~~~ 170 (284)
|+-+......+.|. |+.++|++|..
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999888888773 99999998865
No 131
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.78 E-value=5.8e-09 Score=84.56 Aligned_cols=90 Identities=17% Similarity=0.270 Sum_probs=57.6
Q ss_pred cEEEEECCCCC-ChhhHHHHHHHHhhCCcE---EEEEcCCCCCCCCCC-cccCCcccHhHHHHHHHHHHhcCCCCcEEEE
Q 023299 67 PCVVYCHGNSG-CRADANEAAVILLPSNIT---LFTLDFSGSGLSDGD-YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 67 ~~vv~~HG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~S~~~-~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
.+|||+||.++ ....|..+++.|.++||. |+++++-....+... .....-..+.++.+.|+.+++..+. +|-|+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 46999999998 556899999999999999 799998433221110 0111112256788888888877788 99999
Q ss_pred EEehhHHHHHHHhccC
Q 023299 142 GRSMGAVTSLLYGAED 157 (284)
Q Consensus 142 G~S~Gg~~a~~~a~~~ 157 (284)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887543
No 132
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.77 E-value=1.9e-07 Score=79.73 Aligned_cols=118 Identities=18% Similarity=0.143 Sum_probs=85.0
Q ss_pred EEEEEEEecCCCCCCCCccEEEEECCCCCChhhH--HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC------------
Q 023299 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDFSGSGLSDGDYVSL------------ 114 (284)
Q Consensus 49 ~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~------------ 114 (284)
.-+..+..|... ..+.+|++|.+.|.|.+.... .-++.-|++.|+..+.+..|-||.-.......
T Consensus 76 ~a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~ 154 (348)
T PF09752_consen 76 TARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVM 154 (348)
T ss_pred heEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHH
Confidence 344445566542 234689999999999866533 23367788889999999999998765322111
Q ss_pred CcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCC
Q 023299 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (284)
Q Consensus 115 ~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~ 168 (284)
+...+.+....+.|+.++ +..++++.|.||||.+|..+++..|. +..+-.+++
T Consensus 155 g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 155 GRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 112366778888999998 88999999999999999999999987 554444443
No 133
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.74 E-value=8.3e-08 Score=82.20 Aligned_cols=123 Identities=20% Similarity=0.249 Sum_probs=91.3
Q ss_pred EEEEEEecC-CCcEEEEEEEecCCCCC---CCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC--CCCCCC
Q 023299 37 RQDLEIRNA-RGHVLQCSHYMPSPFPE---DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLSDGD 110 (284)
Q Consensus 37 ~~~~~~~~~-~g~~l~~~~~~P~~~~~---~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--G~S~~~ 110 (284)
...+.+... .+.++..+++.|....+ ....|+|++=||.++....+..+++.+++.||.|..++.+|. |.....
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChh
Confidence 445555443 36678888888875321 136799999999999999999999999999999999999985 333321
Q ss_pred ccc-------CCcccHhHHHHHHHHHHhc---C------CCCcEEEEEEehhHHHHHHHhccCCC
Q 023299 111 YVS-------LGWHEKDDLKVVVSYLRGN---K------QTSRIGLWGRSMGAVTSLLYGAEDPS 159 (284)
Q Consensus 111 ~~~-------~~~~~~~d~~~~i~~~~~~---~------~~~~i~l~G~S~Gg~~a~~~a~~~p~ 159 (284)
... ..|....|+..+++++.+. . ...+|+++|||+||+.++.++..+.+
T Consensus 118 ~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 118 YAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 111 1234478888888888776 2 12789999999999999999877653
No 134
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.73 E-value=4e-08 Score=86.87 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=83.6
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC---CChhhHHHHHHHHhhCC-cEEEEEcCCC-C-CCCCCC-----c
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFSG-S-GLSDGD-----Y 111 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~g-~-G~S~~~-----~ 111 (284)
.++|. |...+|.|+ .+ .++.|++|++||++ |+...-..-...|+++| +.|++++||- . |.-... .
T Consensus 75 ~sEDC--L~LNIwaP~-~~-a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 75 GSEDC--LYLNIWAPE-VP-AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred ccccc--eeEEeeccC-CC-CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccc
Confidence 33455 444588898 22 45689999999987 44444333445688887 9999999992 1 322111 1
Q ss_pred ccCCcccHhHHHHHHHHHHhcC-----CCCcEEEEEEehhHHHHHHHhccCCC----ccEEEEcCCccC
Q 023299 112 VSLGWHEKDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD 171 (284)
Q Consensus 112 ~~~~~~~~~d~~~~i~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~lil~~~~~~ 171 (284)
...+.--+.|...+++|++++. ..++|.|+|+|.||+.++.+.+ .|. ++++|+.||...
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 1001112789999999998874 2389999999999998877664 354 778888887654
No 135
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.71 E-value=5.1e-08 Score=89.69 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=76.8
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCCC---ChhhHHHHHHHHhhC--CcEEEEEcCC-CC---CCCCCCcccCCcccHh
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPS--NITLFTLDFS-GS---GLSDGDYVSLGWHEKD 120 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~--g~~v~~~d~~-g~---G~S~~~~~~~~~~~~~ 120 (284)
|...+|.|.....++..|++|++||++- +.... ....++.. ++.|+.+++| |. ..+... ...+..-..
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~~n~g~~ 155 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELPGNYGLK 155 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCCcchhHH
Confidence 4555888875333456899999999862 22221 12233333 3999999999 32 222211 111111278
Q ss_pred HHHHHHHHHHhcC-----CCCcEEEEEEehhHHHHHHHhccCC--C-ccEEEEcCCc
Q 023299 121 DLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAF 169 (284)
Q Consensus 121 d~~~~i~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~lil~~~~ 169 (284)
|+..+++|+.++. ..++|+|+|+|.||..+..++.... . ++++|++++.
T Consensus 156 D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 156 DQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 9999999998763 2389999999999999988776532 2 8888888764
No 136
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=4.1e-08 Score=88.62 Aligned_cols=143 Identities=19% Similarity=0.262 Sum_probs=108.1
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCC
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~ 110 (284)
..|..+.+.+.+.||++++...+.-.....++++|.+|+.+|+-+-.- .|..--..|.++|+...-.|.||=|+-+..
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccc
Confidence 457888899999999999987666444444568999999998776433 343333346678998888999997765432
Q ss_pred cccCCc-----ccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHH
Q 023299 111 YVSLGW-----HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (284)
Q Consensus 111 ~~~~~~-----~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~ 175 (284)
....|. ....|.++.++||.++.-. ++..+.|.|.||.++..++..+|+ +.++|+-.|+.++-..
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t 589 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNT 589 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhh
Confidence 222221 1278999999999988433 789999999999999999999999 9999999999876443
No 137
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.70 E-value=3e-07 Score=75.92 Aligned_cols=111 Identities=17% Similarity=0.165 Sum_probs=76.8
Q ss_pred CCccEEEEECCCCCChhh-HHHHHHHHhhCCc--EEEEEcCCCCCCCCCCcccC--CcccHhHHHHHHHHHHhcCCCCcE
Q 023299 64 TPLPCVVYCHGNSGCRAD-ANEAAVILLPSNI--TLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRI 138 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~g~--~v~~~d~~g~G~S~~~~~~~--~~~~~~d~~~~i~~~~~~~~~~~i 138 (284)
+.+.++||+||+..+.+. ....++.....++ .++.+.+|..|.-.+-..+. ......++...++.+.+..+..+|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467899999999988764 4455544433333 79999999876532211010 011255677777777777677999
Q ss_pred EEEEEehhHHHHHHHhcc----C--C----CccEEEEcCCccCHHH
Q 023299 139 GLWGRSMGAVTSLLYGAE----D--P----SIAGMVLDSAFSDLFD 174 (284)
Q Consensus 139 ~l~G~S~Gg~~a~~~a~~----~--p----~v~~lil~~~~~~~~~ 174 (284)
.|++||||+.+.+.+... . | .+..+|+.+|-.+...
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 999999999999888544 1 1 2789999999887744
No 138
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.70 E-value=5.6e-08 Score=80.79 Aligned_cols=107 Identities=20% Similarity=0.254 Sum_probs=70.8
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHh-hCC----cEEEEEcCCCC----CCCCCC-ccc-------C----Cc-ccHhHH
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILL-PSN----ITLFTLDFSGS----GLSDGD-YVS-------L----GW-HEKDDL 122 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~-~~g----~~v~~~d~~g~----G~S~~~-~~~-------~----~~-~~~~d~ 122 (284)
...+.||+||++|+...+..++..+. +.| .-++.++.-|+ |.=... ..+ . +. .....+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 46789999999999999999999886 554 22344555444 221110 000 0 11 136779
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC------CCccEEEEcCCccC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSD 171 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~lil~~~~~~ 171 (284)
..++.+|.++++++++.++||||||..++.++..+ |.+..+|.++++.+
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 99999999999999999999999999999998774 45889998876544
No 139
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.68 E-value=6.7e-08 Score=89.61 Aligned_cols=119 Identities=20% Similarity=0.322 Sum_probs=76.0
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCC---CChh-hHHHHHHHHhhCCcEEEEEcCC----CCCCCCCCcccCCcccHhH
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRA-DANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~---~~~~-~~~~~~~~l~~~g~~v~~~d~~----g~G~S~~~~~~~~~~~~~d 121 (284)
|+..+|.|.....+...|++|++||++ |+.. ....-...++..+..|+.++|| |+-.+.......+..-+.|
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 188 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLD 188 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhh
Confidence 566689998755444689999999987 3331 2233334456779999999999 3322221111112222899
Q ss_pred HHHHHHHHHhcCC-----CCcEEEEEEehhHHHHHHHhccCC--C-ccEEEEcCC
Q 023299 122 LKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSA 168 (284)
Q Consensus 122 ~~~~i~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~lil~~~ 168 (284)
...+++|++++.. .++|.|+|+|.||..+..++..-. . ++++|+.|+
T Consensus 189 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 189 QRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 9999999988853 289999999999998876665521 2 999999987
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.68 E-value=6e-08 Score=86.82 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=72.7
Q ss_pred CChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 77 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
.....|..+++.|.+.||.+ ..|++|+|.+-...... ....+++.+.++.+.+..+..+++|+||||||.++..++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~-~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRL-PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccH-HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 34567889999999999865 88999999876542211 11267888888888877777899999999999999999988
Q ss_pred CCC-----ccEEEEcCCcc
Q 023299 157 DPS-----IAGMVLDSAFS 170 (284)
Q Consensus 157 ~p~-----v~~lil~~~~~ 170 (284)
+|+ |+.+|++++..
T Consensus 183 ~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred CCHhHHhHhccEEEECCCC
Confidence 774 88999987653
No 141
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.65 E-value=8.8e-07 Score=79.11 Aligned_cols=122 Identities=13% Similarity=0.078 Sum_probs=77.4
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hHHHHHHHHhhCC----cEEEEEcCCCCCCCCCCcccCCcccHh
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSN----ITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g----~~v~~~d~~g~G~S~~~~~~~~~~~~~ 120 (284)
-|.....++|.|.++. +++.|+|+++||...... .....+..+...| ..++.+|..+. ..........-...+
T Consensus 190 Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~-~~R~~el~~~~~f~~ 267 (411)
T PRK10439 190 LGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT-THRSQELPCNADFWL 267 (411)
T ss_pred cCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc-ccccccCCchHHHHH
Confidence 5677888899998754 457899999999653222 2334555555555 44667775321 111110110000011
Q ss_pred H-HHHHHHHHHhcCCC----CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 121 D-LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 121 d-~~~~i~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
. +.+++-++.+++.. ++.+|.|+||||..|++++.++|+ +.+++..||.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 1 23444555555443 678999999999999999999998 9999999875
No 142
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.56 E-value=3.5e-07 Score=70.16 Aligned_cols=152 Identities=13% Similarity=0.024 Sum_probs=92.9
Q ss_pred cEEEEECCCCCChh-hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 67 PCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 67 ~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
+.+|++||+.++.. .|....+. +--++-.++... ..--..+|-.+.++...+.. ...++|++||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~---~l~~a~rveq~~----------w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWES---ALPNARRVEQDD----------WEAPVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHh---hCccchhcccCC----------CCCCCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 46999999998775 35444332 111122233211 00011444444444333332 35599999999
Q ss_pred hHHHHHHHhccCC-CccEEEEcCCccCHHH-HHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHH
Q 023299 146 GAVTSLLYGAEDP-SIAGMVLDSAFSDLFD-LMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEII 223 (284)
Q Consensus 146 Gg~~a~~~a~~~p-~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
|+.++++++.... .|++++|++|+---.. ...... ..|... -.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~------------------------~tf~~~-----------p~ 113 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL------------------------MTFDPI-----------PR 113 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccchhhc------------------------cccCCC-----------cc
Confidence 9999999988754 4999999998742211 000000 001000 02
Q ss_pred hhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC
Q 023299 224 TGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 224 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 269 (284)
..+..+..++.+.+|.+++++..+.+.+.++ ..++.+.++||-.
T Consensus 114 ~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg--s~lv~~g~~GHiN 157 (181)
T COG3545 114 EPLPFPSVVVASRNDPYVSYEHAEDLANAWG--SALVDVGEGGHIN 157 (181)
T ss_pred ccCCCceeEEEecCCCCCCHHHHHHHHHhcc--Hhheecccccccc
Confidence 2355677788899999999999988888875 5788899999954
No 143
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.55 E-value=1.9e-07 Score=77.70 Aligned_cols=107 Identities=19% Similarity=0.310 Sum_probs=77.1
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCC---------CCcccCCc---------------c-
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD---------GDYVSLGW---------------H- 117 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~---------~~~~~~~~---------------~- 117 (284)
+.+-|+|||=||.++...-+..++-.|++.||.|.++..|.+-.+- .......| +
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4568999999999999999999999999999999999999764321 00000000 0
Q ss_pred -----cHhHHHHHHHHHH-----------------------hcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCCc
Q 023299 118 -----EKDDLKVVVSYLR-----------------------GNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (284)
Q Consensus 118 -----~~~d~~~~i~~~~-----------------------~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~ 169 (284)
.+.++..+++-+. .+...+++.++|||+||+.++...+.+.++++.|+..++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 1334444443332 222235789999999999999888888889998888765
No 144
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.52 E-value=9.1e-07 Score=76.78 Aligned_cols=106 Identities=23% Similarity=0.295 Sum_probs=72.1
Q ss_pred CCccEEEEECCCCCChh----hH---HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCC
Q 023299 64 TPLPCVVYCHGNSGCRA----DA---NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS 136 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~----~~---~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~ 136 (284)
++.|++|++||+|-... .+ ..+...+ + ..+++..||.-.. |......+. ..+.++.+.++++.+..+.+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~-~~~~~~~yP-tQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTS-SDEHGHKYP-TQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccc-cccCCCcCc-hHHHHHHHHHHHHHhccCCC
Confidence 45799999999984322 22 2222222 3 5688889986432 000111122 12788999999999666889
Q ss_pred cEEEEEEehhHHHHHHHhccC------CCccEEEEcCCccCHH
Q 023299 137 RIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLF 173 (284)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a~~~------p~v~~lil~~~~~~~~ 173 (284)
+|+|+|-|.||.+++.+.... +-.+++||+||..++.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998776532 1289999999987764
No 145
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.52 E-value=1.5e-05 Score=64.52 Aligned_cols=207 Identities=12% Similarity=0.045 Sum_probs=119.7
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHHHhhC---CcEEEEEcCCCCCCCC---CCccc----CCcccHhHHHHHHHHHHhc
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSD---GDYVS----LGWHEKDDLKVVVSYLRGN 132 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~G~S~---~~~~~----~~~~~~~d~~~~i~~~~~~ 132 (284)
+..++.++++.|++|...-+..++..|.+. .+.|+.+...||-.-. ..... .-+...+++.--++++++.
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 457899999999999999999998877654 2568888888885433 11111 1112245667777787776
Q ss_pred CCC-CcEEEEEEehhHHHHHHHhccC-CC--ccEEEEcCCc-cCHHHH-------------------------------H
Q 023299 133 KQT-SRIGLWGRSMGAVTSLLYGAED-PS--IAGMVLDSAF-SDLFDL-------------------------------M 176 (284)
Q Consensus 133 ~~~-~~i~l~G~S~Gg~~a~~~a~~~-p~--v~~lil~~~~-~~~~~~-------------------------------~ 176 (284)
.+- .+++++|||.|+++.+.+.... +. +..++++-|- .++.++ .
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 554 7999999999999999998753 22 5555554331 111100 0
Q ss_pred HHHHHHHcccCChhH-----HHHHHH-HHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchH
Q 023299 177 LELVDVYKIRLPKFT-----MAVQYM-RRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVD 250 (284)
Q Consensus 177 ~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 250 (284)
+.++-.+....+..+ ....+. ...+++.......+.+.+.....+.++...+......|..|.++|.+....++
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~k 265 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYK 265 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHh
Confidence 000000000001000 000011 01112222222223333334455667777777788889999999988777777
Q ss_pred HHhhhhccccccccCccCC
Q 023299 251 ELLSEAVPIASKENSAVNE 269 (284)
Q Consensus 251 ~~~~~~~~~~~i~~~gH~~ 269 (284)
...++.--...-+++.|.+
T Consensus 266 dd~~eed~~Ldedki~HAF 284 (301)
T KOG3975|consen 266 DDVPEEDLKLDEDKIPHAF 284 (301)
T ss_pred hhcchhceeeccccCCcce
Confidence 7765532223338888865
No 146
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.51 E-value=6.2e-07 Score=74.45 Aligned_cols=99 Identities=21% Similarity=0.246 Sum_probs=76.8
Q ss_pred cEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhH-HHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD-LKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d-~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
|+++++|+.+|....|..++..+... ..|+..+.+|.+.-.... .+.++ +...++.+++..+-.++.|.|+|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~-----~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPF-----ASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccccc-----CCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 57999999999999999999988765 899999999987532211 11344 444556666665668999999999
Q ss_pred hHHHHHHHhccC---C-CccEEEEcCCccC
Q 023299 146 GAVTSLLYGAED---P-SIAGMVLDSAFSD 171 (284)
Q Consensus 146 Gg~~a~~~a~~~---p-~v~~lil~~~~~~ 171 (284)
||.+|..+|.+. . +|+.++++.+...
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999998764 2 3999999887765
No 147
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.50 E-value=2.2e-06 Score=77.81 Aligned_cols=125 Identities=15% Similarity=0.216 Sum_probs=86.8
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHH-----------H-------HhhCCcEEEEEcCC-CCCC
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-----------I-------LLPSNITLFTLDFS-GSGL 106 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-----------~-------l~~~g~~v~~~d~~-g~G~ 106 (284)
.+..+.+|++...+. ....|+||+++|++|+...+-.+.+ . +. +-.+++.+|.| |+|.
T Consensus 59 ~~~~lFyw~~~s~~~--~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 59 TDKHYFYWAFGPRNG--NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQPAGVGF 135 (462)
T ss_pred CCceEEEEEEEcCCC--CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCCCCcCc
Confidence 367888877765542 3468999999999998876533221 1 11 23678889975 9998
Q ss_pred CCCCcccCCc---ccHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhccC---------C--CccEEEEcCCc
Q 023299 107 SDGDYVSLGW---HEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAED---------P--SIAGMVLDSAF 169 (284)
Q Consensus 107 S~~~~~~~~~---~~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~---------p--~v~~lil~~~~ 169 (284)
|......... ..++|+..+++.+.++.+. .+++|+|+|+||..+..+|..- . +++++++-+|.
T Consensus 136 S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 136 SYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred ccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 8754322211 2278888888877665443 7899999999999887777652 1 28899999887
Q ss_pred cCHH
Q 023299 170 SDLF 173 (284)
Q Consensus 170 ~~~~ 173 (284)
.+..
T Consensus 216 ~dp~ 219 (462)
T PTZ00472 216 TDPY 219 (462)
T ss_pred cChh
Confidence 6553
No 148
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.48 E-value=3.5e-06 Score=72.52 Aligned_cols=132 Identities=15% Similarity=0.147 Sum_probs=91.0
Q ss_pred EEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh---hHHHHHHHHhhCCcEEEEEcCCC--CCCCC----
Q 023299 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSG--SGLSD---- 108 (284)
Q Consensus 38 ~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g--~G~S~---- 108 (284)
+++.....++.+.-+ +|.|.+ .+...++||++||.+.+.+ ....+-..|.+.|++++++..+. .....
T Consensus 62 ~e~~~L~~~~~~fla-L~~~~~--~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 62 DEVQWLQAGEERFLA-LWRPAN--SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hhcEEeecCCEEEEE-EEeccc--CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 333333346666665 788875 3456889999999997654 45667778999999999998886 11000
Q ss_pred --------CC--cccC----------------Ccc--cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-
Q 023299 109 --------GD--YVSL----------------GWH--EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS- 159 (284)
Q Consensus 109 --------~~--~~~~----------------~~~--~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~- 159 (284)
+. .... ... ....+.++++++.++ +..+++|+||+.|+..++.+.+..+.
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 00 0000 000 134566777777666 55779999999999999999998865
Q ss_pred -ccEEEEcCCccCHH
Q 023299 160 -IAGMVLDSAFSDLF 173 (284)
Q Consensus 160 -v~~lil~~~~~~~~ 173 (284)
+.++|++++.....
T Consensus 218 ~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 218 MPDALVLINAYWPQP 232 (310)
T ss_pred ccCeEEEEeCCCCcc
Confidence 89999999875443
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.46 E-value=1.9e-07 Score=80.86 Aligned_cols=105 Identities=20% Similarity=0.248 Sum_probs=64.0
Q ss_pred CCCccEEEEECCCCCCh-h-hH-HHHHHHHhh---CCcEEEEEcCCCCCCCCCCcccCCcc----cHhHHHHHHHHHHhc
Q 023299 63 DTPLPCVVYCHGNSGCR-A-DA-NEAAVILLP---SNITLFTLDFSGSGLSDGDYVSLGWH----EKDDLKVVVSYLRGN 132 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~-~-~~-~~~~~~l~~---~g~~v~~~d~~g~G~S~~~~~~~~~~----~~~d~~~~i~~~~~~ 132 (284)
+.++|++|++||+.++. . .| ..+...+.+ .+++|+++|+... +... ...... ....+...|+.|.+.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~--a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG--ASNN-YPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH--HSS--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh--cccc-ccchhhhHHHHHHHHHHHHHHHHhh
Confidence 34689999999999877 2 34 455554544 4899999999532 1111 100000 134456666777644
Q ss_pred C--CCCcEEEEEEehhHHHHHHHhccCCC---ccEEEEcCCcc
Q 023299 133 K--QTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFS 170 (284)
Q Consensus 133 ~--~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~lil~~~~~ 170 (284)
. ..+++.|+|||+||.+|-.++..... |..++.+.|..
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 3 34899999999999999988876543 88888887754
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.46 E-value=1e-06 Score=71.27 Aligned_cols=106 Identities=23% Similarity=0.282 Sum_probs=77.5
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCC-----cEEEEEcCCCCCCCCCCc---------------ccCCc-ccHhHHHH
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSN-----ITLFTLDFSGSGLSDGDY---------------VSLGW-HEKDDLKV 124 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~G~S~~~~---------------~~~~~-~~~~d~~~ 124 (284)
.-+.||+||.+|+.+++..++.++.+++ --++.+|--|.=...|.. ...+. .-...+..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3467999999999999999999887764 345566666531111110 00011 11567899
Q ss_pred HHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC------CCccEEEEcCCccC
Q 023299 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSD 171 (284)
Q Consensus 125 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~lil~~~~~~ 171 (284)
++.+|.++++++++-++||||||....+++..+ |.+..+|.+++..+
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 999999999999999999999999999998775 45888888876554
No 151
>PRK04940 hypothetical protein; Provisional
Probab=98.45 E-value=2.9e-06 Score=66.28 Aligned_cols=106 Identities=14% Similarity=0.002 Sum_probs=60.6
Q ss_pred CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHH
Q 023299 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCL 215 (284)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (284)
+++.|+|.||||+-|..++.++. + ..||++|.......+...+.. +. . +. .-.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~-----~~---------------~-y~----~~~ 112 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDR-----PE---------------E-YA----DIA 112 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCC-----Cc---------------c-hh----hhh
Confidence 57999999999999999999887 5 455677777665544433211 00 0 11 000
Q ss_pred HHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCC
Q 023299 216 KSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDE 271 (284)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 271 (284)
.+...++-.........+....|++.+.. +.. +....-.++++.+|++|.+.+
T Consensus 113 ~~h~~eL~~~~p~r~~vllq~gDEvLDyr--~a~-~~y~~~y~~~v~~GGdH~f~~ 165 (180)
T PRK04940 113 TKCVTNFREKNRDRCLVILSRNDEVLDSQ--RTA-EELHPYYEIVWDEEQTHKFKN 165 (180)
T ss_pred HHHHHHhhhcCcccEEEEEeCCCcccCHH--HHH-HHhccCceEEEECCCCCCCCC
Confidence 11111211122223356666788888773 222 222222267788999997754
No 152
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.44 E-value=1.7e-06 Score=78.92 Aligned_cols=144 Identities=19% Similarity=0.206 Sum_probs=110.7
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCC
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~ 110 (284)
..|..+.+..+..||.+++..++.-....-+++.|++|+.=|.-|... .+....-.|.++|+.-....-||=|+-...
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 568899999988999999988877654344678899999888766443 344444467899998888899997765532
Q ss_pred cccCC-----cccHhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHH
Q 023299 111 YVSLG-----WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (284)
Q Consensus 111 ~~~~~-----~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~ 176 (284)
....+ .....|.+++.++|.++.-. ++|++.|-|.||++.-.++...|+ ++++|+..|+.+.-..+
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTM 568 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTM 568 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhh
Confidence 22111 12378999999999887433 789999999999999999999998 99999999998875543
No 153
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.42 E-value=3.2e-06 Score=72.16 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=81.5
Q ss_pred CCccEEEEECCCCCChh-hHHHHHHHHhhCC--cEEEEEcCCCCCCCCCCcccCCc------ccHhHHHHHHHHHHhcCC
Q 023299 64 TPLPCVVYCHGNSGCRA-DANEAAVILLPSN--ITLFTLDFSGSGLSDGDYVSLGW------HEKDDLKVVVSYLRGNKQ 134 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g--~~v~~~d~~g~G~S~~~~~~~~~------~~~~d~~~~i~~~~~~~~ 134 (284)
..+.++||+||+..+-+ .-.+.++...+.| ...+.+.+|..|. ...+.+ ....+++.+++++.+..+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~----l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~ 189 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGS----LLGYNYDRESTNYSRPALERLLRYLATDKP 189 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCe----eeecccchhhhhhhHHHHHHHHHHHHhCCC
Confidence 46789999999997766 4667777776665 4556677775543 222222 126789999999999877
Q ss_pred CCcEEEEEEehhHHHHHHHhccC---------CCccEEEEcCCccCHHHHHHH
Q 023299 135 TSRIGLWGRSMGAVTSLLYGAED---------PSIAGMVLDSAFSDLFDLMLE 178 (284)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~~~---------p~v~~lil~~~~~~~~~~~~~ 178 (284)
..+|.|++||||.++++...... .+++-+|+-+|-.+..-....
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q 242 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQ 242 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHH
Confidence 89999999999999998876441 128899999998876554443
No 154
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.39 E-value=9.3e-07 Score=79.67 Aligned_cols=220 Identities=13% Similarity=0.141 Sum_probs=136.7
Q ss_pred CcEEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCC
Q 023299 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (284)
Q Consensus 33 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~ 110 (284)
.+|+.+....++.||++|++.+.. .+...+ +.|++|+.=|+..-.. .+......+.++|...+..+.||=|+=...
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHH
Confidence 578888899999999999986665 332334 6788777666654332 455555777889999999999997765432
Q ss_pred cccCCc----c-cHhHHHHHHHHHHhcCC--CCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHH-----
Q 023299 111 YVSLGW----H-EKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML----- 177 (284)
Q Consensus 111 ~~~~~~----~-~~~d~~~~i~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~----- 177 (284)
....+. + ..+|..++.+.|.++.- .+++.+.|-|-||.+.-....++|+ +.++|...|..++.....
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~ 547 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGS 547 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccch
Confidence 111111 1 27899999999988832 2799999999999999888888999 888888888877644321
Q ss_pred HHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHh-hhhhhccCcccC-CCCCCccccccchHHHhhh
Q 023299 178 ELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIIT-GLRCASTDAASS-SSAPPSILTAKPVDELLSE 255 (284)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~ 255 (284)
.++..++ -|..+.....+.. +++. +.+-. .-..++++..+. +|.++|..+.+...++...
T Consensus 548 sW~~EYG--~Pd~P~d~~~l~~------------YSPy----~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~ 609 (648)
T COG1505 548 SWIAEYG--NPDDPEDRAFLLA------------YSPY----HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV 609 (648)
T ss_pred hhHhhcC--CCCCHHHHHHHHh------------cCch----hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhc
Confidence 1111111 1222211111111 1111 11111 223455555554 4447766666666666655
Q ss_pred hcccccc--ccCccCCCCC
Q 023299 256 AVPIASK--ENSAVNEDEP 272 (284)
Q Consensus 256 ~~~~~~i--~~~gH~~~~p 272 (284)
+.+...+ .++||.-..|
T Consensus 610 ~~pv~~~e~t~gGH~g~~~ 628 (648)
T COG1505 610 GAPVLLREETKGGHGGAAP 628 (648)
T ss_pred CCceEEEeecCCcccCCCC
Confidence 5554444 6689976444
No 155
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.37 E-value=4.8e-06 Score=72.48 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=82.6
Q ss_pred EEecCCCCCCCCccEEEEECCCCCChh-----hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCccc--HhHHHHHH
Q 023299 54 HYMPSPFPEDTPLPCVVYCHGNSGCRA-----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE--KDDLKVVV 126 (284)
Q Consensus 54 ~~~P~~~~~~~~~~~vv~~HG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~--~~d~~~~i 126 (284)
.|.|.. +...+++++++|-+-.... .-..++..+.++|..|+.+++++=..+.+ ..++.+ .+.+..++
T Consensus 97 qy~p~~--e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~ai 171 (445)
T COG3243 97 QYKPLT--EKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAI 171 (445)
T ss_pred ccCCCC--CccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHH
Confidence 444543 2235678899998765333 23567888899999999999986444433 233433 47888999
Q ss_pred HHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC--ccEEEEcCCccC
Q 023299 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSD 171 (284)
Q Consensus 127 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~lil~~~~~~ 171 (284)
+.+++..+.++|.++|+|+||.++..+++.++. |+.+++..+..+
T Consensus 172 d~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 172 DTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 999998888999999999999999888877763 888887765443
No 156
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.32 E-value=4.2e-06 Score=85.71 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=71.6
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHH-HHHHhcCCCCcEEEEEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVV-SYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i-~~~~~~~~~~~i~l~G~ 143 (284)
..+.++++||++++...|..++..|. .++.|+.++.+|++.+.. ...+ .+++.+.+ +.+.......+++++||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~--~~~~---l~~la~~~~~~i~~~~~~~p~~l~G~ 1140 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQ--TATS---LDEVCEAHLATLLEQQPHGPYHLLGY 1140 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCCC--CCCC---HHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 34779999999999999999998875 479999999999986532 1222 33333322 22222223368999999
Q ss_pred ehhHHHHHHHhcc---CCC-ccEEEEcCCc
Q 023299 144 SMGAVTSLLYGAE---DPS-IAGMVLDSAF 169 (284)
Q Consensus 144 S~Gg~~a~~~a~~---~p~-v~~lil~~~~ 169 (284)
||||.+|..+|.+ .+. +..++++++.
T Consensus 1141 S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1141 SLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred chhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999999885 344 8888888764
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.28 E-value=2.7e-06 Score=69.54 Aligned_cols=90 Identities=18% Similarity=0.135 Sum_probs=48.6
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhC--CcEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHHhcCCC--CcEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQT--SRIG 139 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~~~~~~--~~i~ 139 (284)
+.-+||++||..|+..+|..+...+... .+.-..+...+...... ....+... .+.+.+-+....+.... .+|.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 4568999999999999998877766551 22211222222211111 01111111 22222222222222222 5899
Q ss_pred EEEEehhHHHHHHHhc
Q 023299 140 LWGRSMGAVTSLLYGA 155 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~ 155 (284)
++||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999976654
No 158
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.25 E-value=4e-07 Score=74.20 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=81.8
Q ss_pred CccEEEEECCCCCChhhHHHHHHH----HhhCCcEEEEEcCCCCC-----CCC----------CCcccCCc-------cc
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVI----LLPSNITLFTLDFSGSG-----LSD----------GDYVSLGW-------HE 118 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~----l~~~g~~v~~~d~~g~G-----~S~----------~~~~~~~~-------~~ 118 (284)
.++-||++||++.+...+...... |.+.++..+-+|.+--- -.. .....+.| ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 467899999999999977655544 33337888888877221 110 00001111 11
Q ss_pred HhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhcc---------CCCccEEEEcCCccCHHHHHHHHHHHHcccC
Q 023299 119 KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~---------~p~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 187 (284)
..++.++++++.+.... .-.+|+|+|.||.+|..++.. .+.++.+|++|++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 34455555555443211 235899999999999888753 2348999999877421000
Q ss_pred ChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCcc
Q 023299 188 PKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAV 267 (284)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 267 (284)
.. ..+ .-..+..|.+.+.|.+|.+++.+..+.+.+...+. ..+..-+.||
T Consensus 151 --~~-------------------------~~~--~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~gGH 200 (212)
T PF03959_consen 151 --YQ-------------------------ELY--DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHDGGH 200 (212)
T ss_dssp --GT-------------------------TTT----TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEESSSS
T ss_pred --hh-------------------------hhh--ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEECCCC
Confidence 00 000 12346789999999999999987788888888765 4444566788
Q ss_pred CC
Q 023299 268 NE 269 (284)
Q Consensus 268 ~~ 269 (284)
..
T Consensus 201 ~v 202 (212)
T PF03959_consen 201 HV 202 (212)
T ss_dssp S-
T ss_pred cC
Confidence 64
No 159
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.18 E-value=6e-06 Score=65.15 Aligned_cols=127 Identities=19% Similarity=0.264 Sum_probs=81.9
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhH---HHHHHHHhhCCcEEEEEcCCCCCCC-CCCcccC-------
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA---NEAAVILLPSNITLFTLDFSGSGLS-DGDYVSL------- 114 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~g~G~S-~~~~~~~------- 114 (284)
-+..+..-+|+|...+.++.-|++.++.|...+.+.+ ..+.+...+.|+.|+.+|---.|.. .++...+
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAG 103 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAG 103 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCce
Confidence 4677888899999888788889999999999877743 2334455677999999996544321 1111111
Q ss_pred --------Cccc-HhHHHHHHHHHHhc-----C--CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCH
Q 023299 115 --------GWHE-KDDLKVVVSYLRGN-----K--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (284)
Q Consensus 115 --------~~~~-~~d~~~~i~~~~~~-----~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~ 172 (284)
.|.. .+-..-+.+.|.+. . ...++.|+||||||.-|+..+.+.|. .+++-..+|..+.
T Consensus 104 FYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 104 FYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred eEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 1110 00011111222111 1 22579999999999999999888886 7777777776554
No 160
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.14 E-value=1e-05 Score=70.58 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=78.3
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcE---EEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
.-+++++||+++....+..+...+...|+. +..+++++. ...... ....+.+.+.++......+.+++.|+|
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~----~~~~~ql~~~V~~~l~~~ga~~v~Lig 133 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYSL----AVRGEQLFAYVDEVLAKTGAKKVNLIG 133 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCccc----cccHHHHHHHHHHHHhhcCCCceEEEe
Confidence 458999999988888888888878777877 888888754 111111 112455666666666666779999999
Q ss_pred EehhHHHHHHHhccCC--C-ccEEEEcCCccCHHHHH
Q 023299 143 RSMGAVTSLLYGAEDP--S-IAGMVLDSAFSDLFDLM 176 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p--~-v~~lil~~~~~~~~~~~ 176 (284)
|||||.++.+++...+ . |+.++.++++-......
T Consensus 134 HS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 134 HSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTELA 170 (336)
T ss_pred ecccchhhHHHHhhcCccceEEEEEEeccCCCCchhh
Confidence 9999999999998887 3 99999998876544443
No 161
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.03 E-value=4.2e-05 Score=65.30 Aligned_cols=90 Identities=23% Similarity=0.291 Sum_probs=60.4
Q ss_pred HHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcC---C---CCcEEEEEEehhHHHHHHHhccC
Q 023299 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---Q---TSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 84 ~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~---~---~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
.++..+.++||.|+++||.|.|. +...+......+.+.++..++.. + ..+++++|||.||..++..+...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~----~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT----PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC----cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 45566778999999999999987 22222233455555555554432 2 26899999999999887665432
Q ss_pred ----CC----ccEEEEcCCccCHHHHHH
Q 023299 158 ----PS----IAGMVLDSAFSDLFDLML 177 (284)
Q Consensus 158 ----p~----v~~lil~~~~~~~~~~~~ 177 (284)
|+ +.+.++.++..++...+.
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~ 120 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLR 120 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHh
Confidence 33 677777788777766543
No 162
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.01 E-value=0.00052 Score=54.85 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=74.6
Q ss_pred CccEEEEECCCCCChh---hHHHHHHHHhhCCcEEEEEcCCC----CCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCc
Q 023299 65 PLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSG----SGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g----~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~ 137 (284)
.+-.|||+-|.+...- ....+...|.+.+|..+-+-.+. +|.++-. ++.+|+..+++.+...--.+.
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk------~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK------DDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc------ccHHHHHHHHHHhhccCcccc
Confidence 4567888888875333 45667778888899999888773 3333211 237888888887754422369
Q ss_pred EEEEEEehhHHHHHHHhccC--CC-ccEEEEcCCccCHH
Q 023299 138 IGLWGRSMGAVTSLLYGAED--PS-IAGMVLDSAFSDLF 173 (284)
Q Consensus 138 i~l~G~S~Gg~~a~~~a~~~--p~-v~~lil~~~~~~~~ 173 (284)
|+|+|||.|+.-.+++...- ++ +++.|+.+|.++-+
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999999998887432 33 99999999988654
No 163
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.90 E-value=8.1e-05 Score=59.77 Aligned_cols=87 Identities=16% Similarity=0.085 Sum_probs=59.3
Q ss_pred CChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhH-HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhc
Q 023299 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD-LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 77 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d-~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
+....|..++..+.. ++.|+.++.+|++.+..... . .++ +...++.+....+..+++++|||+||.++..++.
T Consensus 10 ~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA--S---ADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC--C---HHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 566678888887764 68999999999986543221 1 222 2223344444434578999999999999988887
Q ss_pred cC---CC-ccEEEEcCCc
Q 023299 156 ED---PS-IAGMVLDSAF 169 (284)
Q Consensus 156 ~~---p~-v~~lil~~~~ 169 (284)
.. +. +.+++++.+.
T Consensus 84 ~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 84 RLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHhCCCCCcEEEEEccC
Confidence 53 22 8888877653
No 164
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.87 E-value=6.1e-05 Score=59.63 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=97.9
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCC--C-----Ccc-----cCCccc---HhH----HHHHH
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD--G-----DYV-----SLGWHE---KDD----LKVVV 126 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~--~-----~~~-----~~~~~~---~~d----~~~~i 126 (284)
..+||++||.+.+...|..++..+.-.....+++..+=.-.+. + ... .....+ ... +.+++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 4589999999999999988888877677778887665321111 1 000 001111 222 22333
Q ss_pred HHHHhc-CCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC-HHHHHHHHHHHHcccCChhHHHHHHHHHHhhh
Q 023299 127 SYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-LFDLMLELVDVYKIRLPKFTMAVQYMRRVIQK 203 (284)
Q Consensus 127 ~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (284)
+...+. .+.++|++-|.||||+++++.+..++. +.+++..+++.. .... .|...
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~-----------~~~~~------------ 139 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG-----------LPGWL------------ 139 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh-----------ccCCc------------
Confidence 333332 233899999999999999999999875 777766555432 1100 11110
Q ss_pred hccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhh---hhccccccccCccCC
Q 023299 204 KAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLS---EAVPIASKENSAVNE 269 (284)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~ 269 (284)
. ..+ ..+...-++.+|++++....++..+.+. ..+++..+++-+|..
T Consensus 140 -----------------~-~~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~ 189 (206)
T KOG2112|consen 140 -----------------P-GVN-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST 189 (206)
T ss_pred -----------------c-ccC-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc
Confidence 0 000 4566677888999999875444444442 235667779999964
No 165
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.86 E-value=0.00012 Score=58.43 Aligned_cols=159 Identities=18% Similarity=0.129 Sum_probs=98.9
Q ss_pred CccEEEEECCCCCChhhHHHH----HHHHhhCCcEEEEEcCCC------CCCCCC------Cc---c-cCCccc------
Q 023299 65 PLPCVVYCHGNSGCRADANEA----AVILLPSNITLFTLDFSG------SGLSDG------DY---V-SLGWHE------ 118 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~----~~~l~~~g~~v~~~d~~g------~G~S~~------~~---~-~~~~~~------ 118 (284)
.++-||++||+-.+...+..- ...+.+. +..+.+|.|- .-.+.+ .. . ..+|-.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 356799999999888765432 2333333 6666666662 111111 00 0 122211
Q ss_pred ------HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc---------CCCccEEEEcCCccCHHHHHHHHHHHH
Q 023299 119 ------KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVY 183 (284)
Q Consensus 119 ------~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~p~v~~lil~~~~~~~~~~~~~~~~~~ 183 (284)
-+.+..+.+++.++.+.+ +|+|+|.|+.++..++.. +|.++-+|+++++.........
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~----- 155 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDE----- 155 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhh-----
Confidence 223555666776664434 699999999999988872 2448999999988643211100
Q ss_pred cccCChhHHHHHHHHHHhhhhccCCCCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccc
Q 023299 184 KIRLPKFTMAVQYMRRVIQKKAKFDIMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKE 263 (284)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~ 263 (284)
.-....+.+|.+.+.|..|.+++....+.+.+...+. .+..-
T Consensus 156 ------------------------------------~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~H 197 (230)
T KOG2551|consen 156 ------------------------------------SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLEH 197 (230)
T ss_pred ------------------------------------hhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEec
Confidence 0123457788889999999999988888888888655 44446
Q ss_pred cCccCC
Q 023299 264 NSAVNE 269 (284)
Q Consensus 264 ~~gH~~ 269 (284)
.+||..
T Consensus 198 pggH~V 203 (230)
T KOG2551|consen 198 PGGHIV 203 (230)
T ss_pred CCCccC
Confidence 678843
No 166
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.84 E-value=4.7e-05 Score=48.85 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=30.4
Q ss_pred cCCcEEEEEEEEecCCCcEEEEEEEecCCC---CCCCCccEEEEECCCCCChhhH
Q 023299 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPF---PEDTPLPCVVYCHGNSGCRADA 82 (284)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~---~~~~~~~~vv~~HG~~~~~~~~ 82 (284)
....|+-|+..+++.||+.|.. +.+|... +..+.+|+|+|.||..+++..|
T Consensus 6 ~~~GY~~E~h~V~T~DGYiL~l-~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 6 EKHGYPCEEHEVTTEDGYILTL-HRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp HHTT---EEEEEE-TTSEEEEE-EEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred HHcCCCcEEEEEEeCCCcEEEE-EEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 3456778999999999999997 4555432 2345789999999999998876
No 167
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.82 E-value=3.3e-05 Score=69.84 Aligned_cols=164 Identities=16% Similarity=0.112 Sum_probs=103.9
Q ss_pred CccEEEEECCCC--CChhhHHHHH-HHHhhCC--cEEEEEcCCCCCCCCCCcccCCccc-HhHHHHHHHHHH----hcCC
Q 023299 65 PLPCVVYCHGNS--GCRADANEAA-VILLPSN--ITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLR----GNKQ 134 (284)
Q Consensus 65 ~~~~vv~~HG~~--~~~~~~~~~~-~~l~~~g--~~v~~~d~~g~G~S~~~~~~~~~~~-~~d~~~~i~~~~----~~~~ 134 (284)
..|.+|++||.+ ...++|...+ +.+...| ..|..+|++.- ..| .+... ++.+..+.++.. ..++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--igG----~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IGG----ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CCC----cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 468999999998 2233333333 3333333 34445666521 111 11111 333444444322 2233
Q ss_pred CCcEEEEEEehhHHHHHHHhccCCC--ccEEEEcCCccCHHHHHHHHHHHHcccCChhHHHHHHHHHHhhhhccCCCCCC
Q 023299 135 TSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVIQKKAKFDIMDL 212 (284)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (284)
-..|+|+|.|||+.++.++.....+ |+++|.++-..+- ...|.
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~------------vdgpr----------------------- 293 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT------------VDGPR----------------------- 293 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccC------------CCccc-----------------------
Confidence 4789999999999999888877665 8888876522110 00000
Q ss_pred cHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCCCC
Q 023299 213 NCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDEPS 273 (284)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~p~ 273 (284)
...-+.+..++.+++.+.|..|...+...++.+.+......++++|.+++|++--|.
T Consensus 294 ----girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 294 ----GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred ----CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCc
Confidence 000134556899999999999999999999999999988899999999999986654
No 168
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.77 E-value=0.00047 Score=62.51 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=64.0
Q ss_pred ccEEEEECCCCCChhh---HHHHHHHHhh-CCcEEEEEcCCCCCCCCCCc--ccCC--c----ccHhHHHHHHHHHHhcC
Q 023299 66 LPCVVYCHGNSGCRAD---ANEAAVILLP-SNITLFTLDFSGSGLSDGDY--VSLG--W----HEKDDLKVVVSYLRGNK 133 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~---~~~~~~~l~~-~g~~v~~~d~~g~G~S~~~~--~~~~--~----~~~~d~~~~i~~~~~~~ 133 (284)
.|++|++-|-+ .... ...+...+++ .|-.++.+..|-+|+|.... .... + +.+.|+...+++++.+.
T Consensus 29 gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 66666665544 3332 1234444554 38899999999999997421 1111 1 12788999999998664
Q ss_pred C---CCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCcc
Q 023299 134 Q---TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (284)
Q Consensus 134 ~---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~ 170 (284)
. ..+++++|-|.||++|..+-.++|+ +.+.+..+++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 2 2689999999999999999999999 77777776543
No 169
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.68 E-value=9.1e-05 Score=69.13 Aligned_cols=118 Identities=23% Similarity=0.322 Sum_probs=74.6
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCCC---ChhhH--HHHHHHHhhCCcEEEEEcCC----CCCCCCCCcccCCcccHh
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA--NEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKD 120 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~~---~~~~~--~~~~~~l~~~g~~v~~~d~~----g~G~S~~~~~~~~~~~~~ 120 (284)
|+.-+|.|.....++ .|++|++||++- +...+ ......+..+...|+.+.+| |+... ++....+.--..
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st-~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLST-GDSAAPGNLGLF 174 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeec-CCCCCCCcccHH
Confidence 444578887533222 799999999973 22222 22222344557889999999 22222 111112222267
Q ss_pred HHHHHHHHHHhcC-----CCCcEEEEEEehhHHHHHHHhccCC-C--ccEEEEcCCc
Q 023299 121 DLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAF 169 (284)
Q Consensus 121 d~~~~i~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~lil~~~~ 169 (284)
|+..+++|+.++. ..++|.|+|||.||..+..+...-. + ++..|.+++.
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 9999999998774 2389999999999999877765422 1 6667776654
No 170
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.66 E-value=0.0017 Score=53.82 Aligned_cols=38 Identities=21% Similarity=0.142 Sum_probs=33.5
Q ss_pred CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH
Q 023299 136 SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF 173 (284)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~ 173 (284)
++..++|||+||.+++....++|+ +.+.+++||..-+.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 678999999999999999999988 99999998875443
No 171
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.61 E-value=0.0012 Score=59.28 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=84.8
Q ss_pred EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHH----Hh--------------hCCcEEEEEcCC
Q 023299 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVI----LL--------------PSNITLFTLDFS 102 (284)
Q Consensus 41 ~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~----l~--------------~~g~~v~~~d~~ 102 (284)
.+....+..+.++++.-.+ ....+|+||.+.|++|+++.+..+.+. +. .+-.+++-+|.|
T Consensus 17 ~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~P 94 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQP 94 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--S
T ss_pred ecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeec
Confidence 3333467889986665443 245789999999999998877444321 11 013789999966
Q ss_pred -CCCCCCCCcccC-Ccc---cHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhcc----C-----CC--ccEE
Q 023299 103 -GSGLSDGDYVSL-GWH---EKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGM 163 (284)
Q Consensus 103 -g~G~S~~~~~~~-~~~---~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~----~-----p~--v~~l 163 (284)
|.|.|....... .+. .++|+..+++.+.++.+. .++.|.|.|+||.-+..+|.. . +. ++++
T Consensus 95 vGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi 174 (415)
T PF00450_consen 95 VGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGI 174 (415)
T ss_dssp TTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEE
T ss_pred CceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccc
Confidence 999997544332 222 266777777666665442 589999999999877666543 2 13 9999
Q ss_pred EEcCCccCHHHHHH
Q 023299 164 VLDSAFSDLFDLML 177 (284)
Q Consensus 164 il~~~~~~~~~~~~ 177 (284)
++.+|..+......
T Consensus 175 ~IGng~~dp~~~~~ 188 (415)
T PF00450_consen 175 AIGNGWIDPRIQYN 188 (415)
T ss_dssp EEESE-SBHHHHHH
T ss_pred eecCccccccccce
Confidence 99999988765444
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.57 E-value=0.00025 Score=66.27 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=60.7
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHh----------------hCCcEEEEEcCCCCCCCCCCcccC-C--cc-cHhHHHH
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILL----------------PSNITLFTLDFSGSGLSDGDYVSL-G--WH-EKDDLKV 124 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~g~G~S~~~~~~~-~--~~-~~~d~~~ 124 (284)
++-+|+|+.|+.|+....+.++.... ...|..+++|+-+ +...+ | .. ..+-+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE------e~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE------EFTAMHGHILLDQTEYVND 161 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc------hhhhhccHhHHHHHHHHHH
Confidence 45689999999999887766665433 1246677777642 11111 1 11 1556777
Q ss_pred HHHHHHhcCCC---------CcEEEEEEehhHHHHHHHhccCCC-----ccEEEEcC
Q 023299 125 VVSYLRGNKQT---------SRIGLWGRSMGAVTSLLYGAEDPS-----IAGMVLDS 167 (284)
Q Consensus 125 ~i~~~~~~~~~---------~~i~l~G~S~Gg~~a~~~a~~~p~-----v~~lil~~ 167 (284)
+|.++.+.+.- ..|+++||||||.+|...+. +|+ |.-+|..+
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sVntIITls 217 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchhhhhhhhc
Confidence 77777665422 34999999999999986653 332 55555554
No 173
>COG3150 Predicted esterase [General function prediction only]
Probab=97.51 E-value=0.00052 Score=52.39 Aligned_cols=93 Identities=12% Similarity=0.082 Sum_probs=55.0
Q ss_pred EEEECCCCCChhhHHHHHH-HHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhH
Q 023299 69 VVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGA 147 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg 147 (284)
+|++||+.++..+...... .+.+. |.|..+.+...+... ...+.+.++.+....+.+.+.|+|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-------~~~~i~y~~p~l~h~----p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-------DVRDIEYSTPHLPHD----PQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-------cccceeeecCCCCCC----HHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 7999999987776554432 23222 223233232211111 34444455555555455668999999999
Q ss_pred HHHHHHhccCCCccEEEEcCCccCHHH
Q 023299 148 VTSLLYGAEDPSIAGMVLDSAFSDLFD 174 (284)
Q Consensus 148 ~~a~~~a~~~p~v~~lil~~~~~~~~~ 174 (284)
+.|..++..+. +++++ ++|.....+
T Consensus 71 Y~At~l~~~~G-irav~-~NPav~P~e 95 (191)
T COG3150 71 YYATWLGFLCG-IRAVV-FNPAVRPYE 95 (191)
T ss_pred HHHHHHHHHhC-Chhhh-cCCCcCchh
Confidence 99999988776 66554 344444333
No 174
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.50 E-value=0.002 Score=56.54 Aligned_cols=123 Identities=12% Similarity=0.061 Sum_probs=80.4
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh--HHHHHHHHhhC-CcEEEEEcCCCCCCCCCC------------
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGD------------ 110 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~------------ 110 (284)
...+|.++...... ...+..|+++.|+|++... +....+.+|++ +..|+.+++-+.|..+..
T Consensus 18 R~sKLEyri~ydd~---Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~ 94 (403)
T PF11144_consen 18 RESKLEYRISYDDE---KEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKE 94 (403)
T ss_pred ccceeeEEeecCCC---CCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHH
Confidence 45567776655442 3356789999999988773 34455566654 666677888776632210
Q ss_pred ----------c-----c---------------------------------------------cCCcccHhHHHHHHHHHH
Q 023299 111 ----------Y-----V---------------------------------------------SLGWHEKDDLKVVVSYLR 130 (284)
Q Consensus 111 ----------~-----~---------------------------------------------~~~~~~~~d~~~~i~~~~ 130 (284)
. . .+|...+-|...++.++.
T Consensus 95 iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~ 174 (403)
T PF11144_consen 95 ILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLK 174 (403)
T ss_pred HHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHH
Confidence 0 0 001111446677777777
Q ss_pred hcCCC--C--cEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 131 GNKQT--S--RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 131 ~~~~~--~--~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
++.+. . +++++|+|.||++|...|.-.|. +.++|=.++...
T Consensus 175 k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 175 KIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 76543 3 89999999999999988888887 888777776543
No 175
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.47 E-value=0.00033 Score=58.75 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=74.1
Q ss_pred cEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hHHHHHHHHhhC----CcEEEEEcCCCCCCCCCCcccCC-ccc-H-
Q 023299 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPS----NITLFTLDFSGSGLSDGDYVSLG-WHE-K- 119 (284)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~----g~~v~~~d~~g~G~S~~~~~~~~-~~~-~- 119 (284)
.+....+++|.+.....+.|++++.||-..... ...++.+.+... ...++.+|+-. ......... ... .
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~ 156 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWR 156 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHH
Confidence 345556888888776778999999998543222 233444444433 35667677632 110001111 000 1
Q ss_pred hHHHHHHHHHHhcCCC----CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 120 DDLKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
.=..+++=++.+.++. +.-+|.|.|+||.+++..+..+|+ +..++..||...
T Consensus 157 ~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 157 FLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 1133344555666554 455899999999999999999998 888888887653
No 176
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.47 E-value=0.0022 Score=57.89 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=78.5
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHH----------------HHhh------CCcEEEEEcCC-
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV----------------ILLP------SNITLFTLDFS- 102 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~----------------~l~~------~g~~v~~~d~~- 102 (284)
.+..+.++++...+ .....|+||.+.|++|+.+.+..+.+ .+.. +-.+++-+|.|
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPv 125 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPV 125 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCC
Confidence 46778876655433 23468999999999998875422221 1110 13688899955
Q ss_pred CCCCCCCCcccCCccc---HhHHHHHHHHHHhcCC---CCcEEEEEEehhHHHHHHHhcc----C-----C--CccEEEE
Q 023299 103 GSGLSDGDYVSLGWHE---KDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----P--SIAGMVL 165 (284)
Q Consensus 103 g~G~S~~~~~~~~~~~---~~d~~~~i~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~----~-----p--~v~~lil 165 (284)
|.|.|..........+ ++++..+++.+.+..+ ..++.|.|.|.||.-+..+|.. . + +++++++
T Consensus 126 GtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i 205 (433)
T PLN03016 126 GSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 205 (433)
T ss_pred CCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe
Confidence 8898864332211122 3455555555544433 2689999999999865555432 1 2 2889999
Q ss_pred cCCccCHH
Q 023299 166 DSAFSDLF 173 (284)
Q Consensus 166 ~~~~~~~~ 173 (284)
-+|.++..
T Consensus 206 GNg~t~~~ 213 (433)
T PLN03016 206 GNPVTYMD 213 (433)
T ss_pred cCCCcCch
Confidence 99876543
No 177
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.45 E-value=0.0027 Score=50.51 Aligned_cols=131 Identities=12% Similarity=0.056 Sum_probs=78.4
Q ss_pred EEEEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChh-hH---------------HHHHHHHhhCCcEEEE
Q 023299 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DA---------------NEAAVILLPSNITLFT 98 (284)
Q Consensus 35 ~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~-~~---------------~~~~~~l~~~g~~v~~ 98 (284)
.++..+.++..........+..|... ..+...+|++||.|--.. .| .+++....+.||.|+.
T Consensus 72 Lkr~~ip~d~~e~E~~SFiF~s~~~l--t~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv 149 (297)
T KOG3967|consen 72 LKRVSIPVDATESEPKSFIFMSEDAL--TNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIV 149 (297)
T ss_pred ceeEeecCCCCCCCCcceEEEChhHh--cCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEE
Confidence 45566666543444455434333321 235679999999983111 22 2345555667999998
Q ss_pred EcCCC---CCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC---ccEEEEcC
Q 023299 99 LDFSG---SGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDS 167 (284)
Q Consensus 99 ~d~~g---~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~lil~~ 167 (284)
.+.-- +-++...+........+.+.-+...+......+.+.++.||.||...+.+..++|. |.++.+-.
T Consensus 150 ~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 150 LNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred eCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 87531 11111122222112255565555666555456899999999999999999999985 66665543
No 178
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.42 E-value=0.0017 Score=53.52 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=63.9
Q ss_pred cEEEEECCCCCChhh--HHHHHHHHhhC-CcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCC-CcEEEEE
Q 023299 67 PCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWG 142 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~-~~i~l~G 142 (284)
.++|++||.+.+... +..+.+.+.+. |..|.+.+. |.| ........ ..+.+..+.+.+.+-... +-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~p--l~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMP--LWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhcc--HHHHHHHHHHHHhcchhccCceEEEE
Confidence 579999999976665 66777766654 888888887 233 11101111 134455555555432222 5689999
Q ss_pred EehhHHHHHHHhccCC--CccEEEEcCC
Q 023299 143 RSMGAVTSLLYGAEDP--SIAGMVLDSA 168 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p--~v~~lil~~~ 168 (284)
.|.||.++-.++..-+ .++..|.+++
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccC
Confidence 9999999988887654 4999998865
No 179
>PLN02209 serine carboxypeptidase
Probab=97.39 E-value=0.0071 Score=54.65 Aligned_cols=133 Identities=15% Similarity=0.175 Sum_probs=81.5
Q ss_pred EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHH----------------HHhh------CCcEEE
Q 023299 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV----------------ILLP------SNITLF 97 (284)
Q Consensus 40 ~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~----------------~l~~------~g~~v~ 97 (284)
+.+....+..+.++++.... .....|+|+++.|++|+.+.+..+.+ .+.. +-.+++
T Consensus 44 ~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 44443446778775554332 23468999999999998876533321 0111 135788
Q ss_pred EEcCC-CCCCCCCCcc-cCCc--ccHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhcc----C-----CC--
Q 023299 98 TLDFS-GSGLSDGDYV-SLGW--HEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAE----D-----PS-- 159 (284)
Q Consensus 98 ~~d~~-g~G~S~~~~~-~~~~--~~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~----~-----p~-- 159 (284)
-+|.| |.|.|..... .... .+++|+..+++.+.+..+. .++.|.|.|.||.-+..+|.. . +.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 89955 8898864322 1111 1255666666655555432 589999999999855555432 1 22
Q ss_pred ccEEEEcCCccCHHH
Q 023299 160 IAGMVLDSAFSDLFD 174 (284)
Q Consensus 160 v~~lil~~~~~~~~~ 174 (284)
++++++.+|.++...
T Consensus 202 l~Gi~igng~td~~~ 216 (437)
T PLN02209 202 LQGYVLGNPITHIEF 216 (437)
T ss_pred eeeEEecCcccChhh
Confidence 889999999876543
No 180
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.36 E-value=0.0011 Score=57.73 Aligned_cols=104 Identities=19% Similarity=0.195 Sum_probs=78.3
Q ss_pred cEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHH
Q 023299 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS 127 (284)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~ 127 (284)
.-|.. .-+|+. ++++...-||+.|-||..+--..++..|.++|+.|+.+|-.=+==|...+... ..|+..+++
T Consensus 245 eaLPV-~e~~a~--~~~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~----a~Dl~r~i~ 317 (456)
T COG3946 245 EALPV-VEVPAK--PGNSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQI----AADLSRLIR 317 (456)
T ss_pred CCCCc-eeeccC--CCCcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHH----HHHHHHHHH
Confidence 33443 445553 12467889999999998888889999999999999999964332233322222 789999999
Q ss_pred HHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 128 YLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 128 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
+-..+.+..++.|+|+|+|+=+......+.|
T Consensus 318 ~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 318 FYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 9988888899999999999998876666555
No 181
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.34 E-value=0.0071 Score=50.15 Aligned_cols=194 Identities=12% Similarity=0.020 Sum_probs=99.6
Q ss_pred EEEECCCCCChh-hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCC--CcEEEEEEeh
Q 023299 69 VVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSM 145 (284)
Q Consensus 69 vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~--~~i~l~G~S~ 145 (284)
+|++=|+.+... ....+.+.+.+.|+.++.+-.+-....... . ....-+..+++.+.+.... .++.+..+|.
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---K--RLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---c--chHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 555667765544 677788878889999999876532111100 0 1123333444555443222 2899999999
Q ss_pred hHHHHHHHhcc-----------CCCccEEEEcCCccCHH--HHHHHHHHHHcccCC-----hhHHHHHHHHHHhhhh-cc
Q 023299 146 GAVTSLLYGAE-----------DPSIAGMVLDSAFSDLF--DLMLELVDVYKIRLP-----KFTMAVQYMRRVIQKK-AK 206 (284)
Q Consensus 146 Gg~~a~~~a~~-----------~p~v~~lil~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~ 206 (284)
||...+..... .|.++++|++|++.... ..............+ ........+....... ..
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIF 156 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 88876655331 12389999998764322 222222211111100 0011111111111000 11
Q ss_pred CCCCCCcHHHHHHHHH-HhhhhhhccCcccCCCCCCccccccchHHHhhh---hccccccccCcc
Q 023299 207 FDIMDLNCLKSLLYEI-ITGLRCASTDAASSSSAPPSILTAKPVDELLSE---AVPIASKENSAV 267 (284)
Q Consensus 207 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH 267 (284)
..........+.+.+. .....++.+.+.+..|.+++.+.+++..+.... .+....+++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~H 221 (240)
T PF05705_consen 157 GYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPH 221 (240)
T ss_pred cCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCch
Confidence 1111111122222221 122346778889999999999877777776643 355566677766
No 182
>PLN02606 palmitoyl-protein thioesterase
Probab=97.33 E-value=0.002 Score=54.49 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=61.8
Q ss_pred ccEEEEECCCC--CChhhHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCcccCCc-cc-HhHHHHHHHHHHhcCCC-CcEE
Q 023299 66 LPCVVYCHGNS--GCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGW-HE-KDDLKVVVSYLRGNKQT-SRIG 139 (284)
Q Consensus 66 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~~~~-~~-~~d~~~~i~~~~~~~~~-~~i~ 139 (284)
..+||+.||.+ .+...+..+.+.+.+. |..+.++- -|.+. ..++ .. .+.+..+.+.+.+.... +-+.
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~------~~s~~~~~~~Qv~~vce~l~~~~~L~~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV------QDSLFMPLRQQASIACEKIKQMKELSEGYN 98 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc------ccccccCHHHHHHHHHHHHhcchhhcCceE
Confidence 45799999999 5555777777777423 65555444 22221 1122 11 34555555555442111 4689
Q ss_pred EEEEehhHHHHHHHhccCC---CccEEEEcCC
Q 023299 140 LWGRSMGAVTSLLYGAEDP---SIAGMVLDSA 168 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p---~v~~lil~~~ 168 (284)
++|+|.||.++-.++.+.| .|+-+|..++
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 9999999999999988864 4999999865
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.26 E-value=0.0011 Score=59.22 Aligned_cols=82 Identities=13% Similarity=-0.026 Sum_probs=59.2
Q ss_pred hHHHHHHHHhhCCcEE------EEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 81 DANEAAVILLPSNITL------FTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 81 ~~~~~~~~l~~~g~~v------~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
.|..+++.|.+.||.. .-+|+|-.-. .... ....+...|+.+.+.. ..+++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-----~~~~--~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-----ERDE--YFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-----hHHH--HHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHH
Confidence 7888999998877632 2278873211 0001 1567888888887665 68999999999999999988
Q ss_pred ccCC-------CccEEEEcCCcc
Q 023299 155 AEDP-------SIAGMVLDSAFS 170 (284)
Q Consensus 155 ~~~p-------~v~~lil~~~~~ 170 (284)
...+ .|+++|.++++.
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCC
Confidence 7753 299999998653
No 184
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.24 E-value=0.00064 Score=59.48 Aligned_cols=134 Identities=11% Similarity=-0.023 Sum_probs=89.9
Q ss_pred CCCcEEEEEEehhHHHHHHHhccCCCccEEEEcC-CccCHHHHHHHHHHHHc-ccCChhHHHHHHHHHHh----hhhccC
Q 023299 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYK-IRLPKFTMAVQYMRRVI----QKKAKF 207 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~ 207 (284)
.+++.++.|.|-=|+.+...|+..|.|+++|-+. ...++...+....+.++ .....+ ..+...-+ ......
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~---~dY~~~gi~~~l~tp~f~ 246 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAF---QDYYNEGITQQLDTPEFD 246 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccch---hhhhHhCchhhcCCHHHH
Confidence 4599999999999999999999888888887654 56688888887777666 222222 11211111 000000
Q ss_pred C-CCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCCCCcc
Q 023299 208 D-IMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDEPSSF 275 (284)
Q Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~p~~~ 275 (284)
. ..-.++. .....+..|..++.+..|++..+-....+...+....-+..+||++|.......+
T Consensus 247 ~L~~ivDP~-----~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~~~~~ 310 (367)
T PF10142_consen 247 KLMQIVDPY-----SYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIGSDVV 310 (367)
T ss_pred HHHHhcCHH-----HHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccchHHHH
Confidence 0 0001111 2345678899999999999888887888888887777788899999988765443
No 185
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.24 E-value=0.00042 Score=57.98 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=51.2
Q ss_pred CccEEEEECCCCCCh---hhHHHHHHHHhh--CCcEEEEEcCCCCCCCCCCcccCC-ccc-HhHHHHHHHHHHhcCCC-C
Q 023299 65 PLPCVVYCHGNSGCR---ADANEAAVILLP--SNITLFTLDFSGSGLSDGDYVSLG-WHE-KDDLKVVVSYLRGNKQT-S 136 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~--~g~~v~~~d~~g~G~S~~~~~~~~-~~~-~~d~~~~i~~~~~~~~~-~ 136 (284)
+..+||+.||+|.+. ..+..+...+.+ -|.-|.+++.- .+.++ ....+ +.. -+.++.+.+.+.+.... +
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~--D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSE--DVENSFFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHH--HHHHHHHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcch--hhhhhHHHHHHHHHHHHHHHHhhChhhhc
Confidence 345799999999643 245555443332 27778887762 11111 01111 112 23334444444433222 5
Q ss_pred cEEEEEEehhHHHHHHHhccCCC--ccEEEEcCC
Q 023299 137 RIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSA 168 (284)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a~~~p~--v~~lil~~~ 168 (284)
-+.++|+|.||.++-.++.+.+. |+-+|.+++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 68999999999999999988754 999999874
No 186
>COG0627 Predicted esterase [General function prediction only]
Probab=97.20 E-value=0.0014 Score=56.40 Aligned_cols=111 Identities=18% Similarity=0.158 Sum_probs=65.6
Q ss_pred CCCccEEEEECCCCCChhh---HHHHHHHHhhCCcEEEEEcCC--------------CCCCC---CCCc--c---cCCcc
Q 023299 63 DTPLPCVVYCHGNSGCRAD---ANEAAVILLPSNITLFTLDFS--------------GSGLS---DGDY--V---SLGWH 117 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~--------------g~G~S---~~~~--~---~~~~~ 117 (284)
++.-|+++++||..++... ...+-......|+.++++|-. |-+.| .... . ...|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 3567899999999987542 233334445568888876433 21111 0000 0 01121
Q ss_pred c--HhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHH
Q 023299 118 E--KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF 173 (284)
Q Consensus 118 ~--~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~ 173 (284)
+ ..++.+.++........ ++..++||||||.-|+.+|+++|+ ++.+...+|+.+..
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 1 23333222222111010 278999999999999999999987 99999888876554
No 187
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.01 E-value=0.0012 Score=60.60 Aligned_cols=84 Identities=13% Similarity=-0.012 Sum_probs=55.9
Q ss_pred hHHHHHHHHhhCCcE-----EEEEcCCCCCCCCCCcc-cCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 81 DANEAAVILLPSNIT-----LFTLDFSGSGLSDGDYV-SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 81 ~~~~~~~~l~~~g~~-----v~~~d~~g~G~S~~~~~-~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
.|..+++.|.+.||. ...+|+|-. ..... ...+ ...+...|+.+.+..+-.+++|+||||||.+++++.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls---~~~le~rd~Y--F~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLS---FQNTEVRDQT--LSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccC---ccchhhhhHH--HHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 457889999988885 223444411 00000 0011 466888888887665568999999999999999876
Q ss_pred ccC-----------CC-----ccEEEEcCCc
Q 023299 155 AED-----------PS-----IAGMVLDSAF 169 (284)
Q Consensus 155 ~~~-----------p~-----v~~lil~~~~ 169 (284)
... ++ |++.|.+++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccc
Confidence 532 21 8899988764
No 188
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.95 E-value=0.009 Score=50.71 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=61.2
Q ss_pred ccEEEEECCCCCChh--hHHHHHHHHhhC-CcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCC-CcEEEE
Q 023299 66 LPCVVYCHGNSGCRA--DANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~--~~~~~~~~l~~~-g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~-~~i~l~ 141 (284)
..+||+.||+|.+.. .+..+.+.+.+. |..|.++.. |.+.. ..+-....+.++.+.+.+.+.... +-+.++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~--~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVG--DSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcc--ccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 456999999996544 566666666443 666666544 33311 111001134455555555442111 468999
Q ss_pred EEehhHHHHHHHhccCC---CccEEEEcCC
Q 023299 142 GRSMGAVTSLLYGAEDP---SIAGMVLDSA 168 (284)
Q Consensus 142 G~S~Gg~~a~~~a~~~p---~v~~lil~~~ 168 (284)
|+|.||.++-.++.+.+ .|+.+|..++
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 99999999999988764 4999999864
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.95 E-value=0.0048 Score=53.95 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=71.0
Q ss_pred ccEEEEECCCCCChhhHHH---HHHHHh-hCCcEEEEEcCCCCCCCCC--Cc-----ccCCcc----cHhHHHHHHHHHH
Q 023299 66 LPCVVYCHGNSGCRADANE---AAVILL-PSNITLFTLDFSGSGLSDG--DY-----VSLGWH----EKDDLKVVVSYLR 130 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~---~~~~l~-~~g~~v~~~d~~g~G~S~~--~~-----~~~~~~----~~~d~~~~i~~~~ 130 (284)
+.+|+|.-|.-|+.+.+.. ++..++ +.+--++-...|-+|+|.. .. ...++- .+.|....+..++
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 3678888999887775431 222222 3366788889999999862 11 112221 2677888888888
Q ss_pred hcCCC--CcEEEEEEehhHHHHHHHhccCCC-c-cEEEEcCC
Q 023299 131 GNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-I-AGMVLDSA 168 (284)
Q Consensus 131 ~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v-~~lil~~~ 168 (284)
+.+.. .+++.+|-|.||++|..+=.++|+ + .++...+|
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 87544 789999999999999999999998 3 34444444
No 190
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.94 E-value=0.0018 Score=49.75 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=35.1
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC-----CccEEEEcCCc
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAF 169 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~lil~~~~ 169 (284)
...+...++......+..++++.||||||.+|..++.... ....++..+++
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 3445555555555556789999999999999998877653 24445555544
No 191
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.93 E-value=0.0016 Score=48.99 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC----C---C-ccEEEEcCCcc
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----P---S-IAGMVLDSAFS 170 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p---~-v~~lil~~~~~ 170 (284)
..+.+.+..+.++.+..++++.|||+||.+|..++... + . +..+..-+|..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 35556666666666668999999999999998887652 1 2 55555555544
No 192
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.92 E-value=0.0088 Score=49.11 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=61.1
Q ss_pred CccEEEEECCCC--CChh-hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCC----Cc
Q 023299 65 PLPCVVYCHGNS--GCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT----SR 137 (284)
Q Consensus 65 ~~~~vv~~HG~~--~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~----~~ 137 (284)
+..+|-|+-|.. .... .|..+.+.|+++||.|++.=|.- |. +.........+....+++.+.+..+. -+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tf---DH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TF---DHQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CC---cHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 566777777754 2222 68889999999999999877742 10 00000000123344445555544322 36
Q ss_pred EEEEEEehhHHHHHHHhccCCC-ccEEEEcCC
Q 023299 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (284)
Q Consensus 138 i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~ 168 (284)
+.-+|||||+-+-+.+....+. -++-|+++-
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred eeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 7789999999998888766543 566676653
No 193
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.69 E-value=0.002 Score=52.00 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=51.5
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcE-EEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~ 143 (284)
++..+||..|+|.+...+..+. ...++. ++++|||..- . |. + + + ..++|.|++.
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~--------~------d~----~-~-~--~y~~i~lvAW 64 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLD--------F------DF----D-L-S--GYREIYLVAW 64 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCcccc--------c------cc----c-c-c--cCceEEEEEE
Confidence 3579999999999888665543 123444 4568887421 0 11 1 1 1 4589999999
Q ss_pred ehhHHHHHHHhccCCCccEEEEcCC
Q 023299 144 SMGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 144 S~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
|||-++|..+....| ++..|.++|
T Consensus 65 SmGVw~A~~~l~~~~-~~~aiAING 88 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP-FKRAIAING 88 (213)
T ss_pred eHHHHHHHHHhccCC-cceeEEEEC
Confidence 999999988866544 565555554
No 194
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.68 E-value=0.0035 Score=56.96 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=65.5
Q ss_pred CCccEEEEECCCCC---ChhhHHHHHHHHh-hCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcC---CC-
Q 023299 64 TPLPCVVYCHGNSG---CRADANEAAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---QT- 135 (284)
Q Consensus 64 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~---~~- 135 (284)
.++-.|+-+||+|- +..+-+.+.+.++ ..|+.++.+||-- .+-..+. +..+++--+.-|+.++. ++
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL-----APEaPFP-RaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL-----APEAPFP-RALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc-----CCCCCCC-cHHHHHHHHHHHHhcCHHHhCcc
Confidence 46778999999982 3333344444333 3599999999843 2212221 22677777888887763 43
Q ss_pred -CcEEEEEEehhHHHHHHHhccC---C-C-ccEEEEcCC
Q 023299 136 -SRIGLWGRSMGAVTSLLYGAED---P-S-IAGMVLDSA 168 (284)
Q Consensus 136 -~~i~l~G~S~Gg~~a~~~a~~~---p-~-v~~lil~~~ 168 (284)
++|+++|.|.||++++.++.+. . . .+++++.-+
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 8999999999999887776652 1 2 667777644
No 195
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.63 E-value=0.0065 Score=49.99 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC-----C-CccEEEEcCCccC
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSD 171 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p-~v~~lil~~~~~~ 171 (284)
..++...+..++++.+..++++.||||||++|..++... + .+.++..-+|...
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 344555556666665668999999999999998887652 2 2666666666543
No 196
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.60 E-value=0.033 Score=50.24 Aligned_cols=130 Identities=15% Similarity=0.185 Sum_probs=79.6
Q ss_pred EEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHH-----hhC-------------CcEEEEEcC
Q 023299 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVIL-----LPS-------------NITLFTLDF 101 (284)
Q Consensus 40 ~~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l-----~~~-------------g~~v~~~d~ 101 (284)
+.+....+..|.+|++.-.+ ....+|+||.+.|++|+++.. .+...+ ... -.+++-+|.
T Consensus 49 v~v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred EECCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 33444468999986554332 234689999999999988754 222111 111 246778888
Q ss_pred C-CCCCCCCCcc-cCCcc---cHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhcc----C-----C--CccE
Q 023299 102 S-GSGLSDGDYV-SLGWH---EKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAE----D-----P--SIAG 162 (284)
Q Consensus 102 ~-g~G~S~~~~~-~~~~~---~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~----~-----p--~v~~ 162 (284)
| |.|.|-.... ..... .++|.-.++....++.+. ..+.|.|.|.+|.....+|.. . | ++++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 7 7777753221 11111 256666665444444332 789999999999666555432 2 3 2899
Q ss_pred EEEcCCccCH
Q 023299 163 MVLDSAFSDL 172 (284)
Q Consensus 163 lil~~~~~~~ 172 (284)
+++-+|.++.
T Consensus 206 ~~IGNg~td~ 215 (454)
T KOG1282|consen 206 YAIGNGLTDP 215 (454)
T ss_pred EEecCcccCc
Confidence 9998886653
No 197
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.59 E-value=0.0013 Score=55.65 Aligned_cols=214 Identities=19% Similarity=0.093 Sum_probs=110.0
Q ss_pred cEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC----C----cc--
Q 023299 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL----G----WH-- 117 (284)
Q Consensus 48 ~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~----~----~~-- 117 (284)
..+.+.++.|......+..|.+++.||.++........+..++..++.++..+...+|.+....... . +.
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 5677778888753222568999999999998887656777888888888888763333333221110 0 00
Q ss_pred -cHhHHHHHHHH--HHhcCCCCcEEEEEEehhHHHHHHHhccCC---CccEEEEcC----CccCHHH------HHHHHHH
Q 023299 118 -EKDDLKVVVSY--LRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---SIAGMVLDS----AFSDLFD------LMLELVD 181 (284)
Q Consensus 118 -~~~d~~~~i~~--~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~lil~~----~~~~~~~------~~~~~~~ 181 (284)
.......++.. ........+....|.++|+..+..++...+ +...+++.. +...+.. .......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~ 190 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELID 190 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhh
Confidence 00001111111 000001267788888888888888777765 222222221 1111100 0111111
Q ss_pred HHcccCChhHHHHHHHHHHhhhhccCCCCCCc----HHHHHHHHHHhhhh-hhccCcccCCCCCCccccccchHHHhhh-
Q 023299 182 VYKIRLPKFTMAVQYMRRVIQKKAKFDIMDLN----CLKSLLYEIITGLR-CASTDAASSSSAPPSILTAKPVDELLSE- 255 (284)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~- 255 (284)
.+......... ......+...... ...+.+ .....+. .|.+.++|..|..++......+.+....
T Consensus 191 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~d~~-~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~ 261 (299)
T COG1073 191 YLITPGGFAPL--------PAPEAPLDTLPLRAVLLLLLDPF-DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER 261 (299)
T ss_pred hhccCCCCCCC--------CcccccccccccchhhhccCcch-hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC
Confidence 11100000000 0000000000000 000111 2233344 6999999999999999877777777766
Q ss_pred hccccccccCccCCC
Q 023299 256 AVPIASKENSAVNED 270 (284)
Q Consensus 256 ~~~~~~i~~~gH~~~ 270 (284)
......+++++|+..
T Consensus 262 ~~~~~~~~~~~H~~~ 276 (299)
T COG1073 262 PKKLLFVPGGGHIDL 276 (299)
T ss_pred CceEEEecCCccccc
Confidence 566777899999764
No 198
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.42 E-value=0.048 Score=49.00 Aligned_cols=123 Identities=18% Similarity=0.159 Sum_probs=77.9
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCCh-hhHHHHHHHHhhCCcEEEE-EcCCCCCCCCCCcccCCccc-H
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFT-LDFSGSGLSDGDYVSLGWHE-K 119 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~g~~v~~-~d~~g~G~S~~~~~~~~~~~-~ 119 (284)
.+..+..+.+ .+-| ++-+.|..|+..|.-... -+-..++ ...|...+. -|.|--|.+= -.+..+ -
T Consensus 271 ~D~~reEi~y-YFnP----GD~KPPL~VYFSGyR~aEGFEgy~MM---k~Lg~PfLL~~DpRleGGaF----YlGs~eyE 338 (511)
T TIGR03712 271 VDSKRQEFIY-YFNP----GDFKPPLNVYFSGYRPAEGFEGYFMM---KRLGAPFLLIGDPRLEGGAF----YLGSDEYE 338 (511)
T ss_pred ecCCCCeeEE-ecCC----cCCCCCeEEeeccCcccCcchhHHHH---HhcCCCeEEeecccccccee----eeCcHHHH
Confidence 3445666665 3434 345678999999986411 1222233 344655554 4666444321 111111 2
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhccCCCccEEEEcCCccCHHHHHHH
Q 023299 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLE 178 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~~~~~~~~~~~ 178 (284)
..+.++|+..++.++. +.++|-|-|||..-|++++++.. .+++|+-=|..++...+..
T Consensus 339 ~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~NLGtiA~n 398 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVNLGTIASR 398 (511)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC-CceEEEcCcccchhhhhcc
Confidence 3456666666665565 78999999999999999998764 7888888899998877664
No 199
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.40 E-value=0.035 Score=50.29 Aligned_cols=75 Identities=16% Similarity=0.234 Sum_probs=48.4
Q ss_pred HHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHH----HHhcCC-CCcEEEEEEehhHHHHHHHhccCCC
Q 023299 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSY----LRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPS 159 (284)
Q Consensus 85 ~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~----~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~ 159 (284)
+...| ..|..|+-+.+.-.- ..-+++.|+..+... +....+ ..+.+|+|.+.||+.++.+|+.+|+
T Consensus 93 vG~AL-~~GHPvYFV~F~p~P--------~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFFPEP--------EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHH-HcCCCeEEEEecCCC--------CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 33444 469999888775211 111235665554433 333323 2589999999999999999999999
Q ss_pred -ccEEEEcCC
Q 023299 160 -IAGMVLDSA 168 (284)
Q Consensus 160 -v~~lil~~~ 168 (284)
+.-+|+.+.
T Consensus 164 ~~gplvlaGa 173 (581)
T PF11339_consen 164 LVGPLVLAGA 173 (581)
T ss_pred ccCceeecCC
Confidence 555555543
No 200
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.32 E-value=0.0068 Score=53.98 Aligned_cols=76 Identities=14% Similarity=-0.014 Sum_probs=53.2
Q ss_pred hhHHHHHHHHhhCCcE------EEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHH
Q 023299 80 ADANEAAVILLPSNIT------LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (284)
Q Consensus 80 ~~~~~~~~~l~~~g~~------v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 153 (284)
..|..+++.+..-||. -..+|+|-.-....... .....+...++.+.+..+..+++|++|||||.+.+++
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd----~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERD----QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHH----HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 3677888888877775 34577773111111000 1156788888888777777999999999999999999
Q ss_pred hccCCC
Q 023299 154 GAEDPS 159 (284)
Q Consensus 154 a~~~p~ 159 (284)
...++.
T Consensus 200 l~w~~~ 205 (473)
T KOG2369|consen 200 LKWVEA 205 (473)
T ss_pred Hhcccc
Confidence 887753
No 201
>PLN02454 triacylglycerol lipase
Probab=96.26 E-value=0.017 Score=51.27 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHhcCCCCc--EEEEEEehhHHHHHHHhccC-------C--CccEEEEcCCccC
Q 023299 119 KDDLKVVVSYLRGNKQTSR--IGLWGRSMGAVTSLLYGAED-------P--SIAGMVLDSAFSD 171 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~--i~l~G~S~Gg~~a~~~a~~~-------p--~v~~lil~~~~~~ 171 (284)
.+++...++.++++++..+ |++.||||||++|+.+|... + .|..+..-+|-..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 4466777777777765544 99999999999999887531 1 2555555566543
No 202
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.25 E-value=0.011 Score=51.67 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=53.6
Q ss_pred CCCccEEEEECCCCC-ChhhHHHHHHHHhhC--CcEEEEEcCCCCC-CCCCCcccCCcccHhHHHHHHHHHHhcCCCCcE
Q 023299 63 DTPLPCVVYCHGNSG-CRADANEAAVILLPS--NITLFTLDFSGSG-LSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~-~~~~~~~~~~~l~~~--g~~v~~~d~~g~G-~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i 138 (284)
.++.-.||+.||.-+ +...|...+....++ +..++.-.+.+.- .+.....-.|++..+++ ++.+... .+++|
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~---~e~~~~~-si~kI 152 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEV---KETLYDY-SIEKI 152 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHH---hhhhhcc-cccee
Confidence 456679999999988 455666666655544 4444444444332 22222223344434443 3333222 36899
Q ss_pred EEEEEehhHHHHHHHhcc
Q 023299 139 GLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 139 ~l~G~S~Gg~~a~~~a~~ 156 (284)
.++|||+||.++.++...
T Consensus 153 SfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeeeecCCeeeeEEEEe
Confidence 999999999998766554
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.17 E-value=0.025 Score=44.69 Aligned_cols=76 Identities=17% Similarity=0.075 Sum_probs=44.8
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCcc-cHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc--CC-----CccEEE
Q 023299 93 NITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DP-----SIAGMV 164 (284)
Q Consensus 93 g~~v~~~d~~g~G~S~~~~~~~~~~-~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p-----~v~~li 164 (284)
...+..++|+...... ....+.. -..++...++....+-+..+++|.|+|+|+.++..++.. .+ +|.++|
T Consensus 39 ~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp EEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred eeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 3556667787532211 0000001 155666666666566566899999999999999999877 22 288999
Q ss_pred EcCCcc
Q 023299 165 LDSAFS 170 (284)
Q Consensus 165 l~~~~~ 170 (284)
+.+-+.
T Consensus 117 lfGdP~ 122 (179)
T PF01083_consen 117 LFGDPR 122 (179)
T ss_dssp EES-TT
T ss_pred EecCCc
Confidence 887543
No 204
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.15 E-value=0.013 Score=47.93 Aligned_cols=49 Identities=12% Similarity=0.011 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC-----CccEEEEcCCc
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAF 169 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~lil~~~~ 169 (284)
..+.+.++.+.+..+ .++.+.|||+||++|.+++...+ .|..+....++
T Consensus 69 ~~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 344444444444433 46999999999999999988743 27777765543
No 205
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.88 E-value=0.082 Score=47.59 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=86.5
Q ss_pred ecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhH-----HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccC--C
Q 023299 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSL--G 115 (284)
Q Consensus 43 ~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~--~ 115 (284)
.+.++.-..=++|.+.... ....|+.|++-|-+.....| ........+.|-.|+....|=+|.|....... .
T Consensus 64 ~~~~~~~~Qq~~y~n~~~~-~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~n 142 (514)
T KOG2182|consen 64 DSSNGKFFQQRFYNNNQWA-KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSN 142 (514)
T ss_pred hcchhhhhhhheeeccccc-cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccc
Confidence 3344433333455554432 33578888888877655444 23334444569999999999999885321111 1
Q ss_pred c------ccHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhccCCC-ccEEEEcC-Cc---cCHHHHHH
Q 023299 116 W------HEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS-AF---SDLFDLML 177 (284)
Q Consensus 116 ~------~~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~-~~---~~~~~~~~ 177 (284)
. +.+.|+...|+.+..+.+. .+.+.+|-|.-|.++.-+=.++|+ +.+-|..+ |. .++.+.+.
T Consensus 143 lk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~~DF~EY~~ 218 (514)
T KOG2182|consen 143 LKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAKVDFYEYLM 218 (514)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEEecHHHHHH
Confidence 1 1277888888888777654 389999999999999989889999 55555544 42 35555443
No 206
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.84 E-value=0.034 Score=45.91 Aligned_cols=95 Identities=13% Similarity=-0.004 Sum_probs=56.0
Q ss_pred CccEEEEECCCCCChhhH-HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCc-ccHhHH----HHHHHHHHhcC-----
Q 023299 65 PLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKDDL----KVVVSYLRGNK----- 133 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~-~~~~d~----~~~i~~~~~~~----- 133 (284)
..++-|.+.|.|.+...- ..+..-+.+++...+...-+=+|.......-... ..+.|+ .+.|+...+..
T Consensus 112 ~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~ 191 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSA 191 (371)
T ss_pred cCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccc
Confidence 456667777666544322 2334456677888888888877766532111100 002221 12233333332
Q ss_pred -CCCcEEEEEEehhHHHHHHHhccCCC
Q 023299 134 -QTSRIGLWGRSMGAVTSLLYGAEDPS 159 (284)
Q Consensus 134 -~~~~i~l~G~S~Gg~~a~~~a~~~p~ 159 (284)
+..+..++|.||||.+|-.+...++.
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccCCC
Confidence 44789999999999999999887776
No 207
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.76 E-value=0.013 Score=52.50 Aligned_cols=115 Identities=18% Similarity=0.270 Sum_probs=68.6
Q ss_pred EEEEEEecCCCCCCCCccEEEEECCCC---CChhhHHHHHHHHhhC-CcEEEEEcCC----CC---CCCCCCcccCCccc
Q 023299 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPS-NITLFTLDFS----GS---GLSDGDYVSLGWHE 118 (284)
Q Consensus 50 l~~~~~~P~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~----g~---G~S~~~~~~~~~~~ 118 (284)
|+.-+|.|+- ...+..++|.+=|+| |+.+--..-...|+.. ..-|+.++|| |+ +.++..+..++
T Consensus 121 LYlNVW~P~~--~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG--- 195 (601)
T KOG4389|consen 121 LYLNVWAPAA--DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG--- 195 (601)
T ss_pred eEEEEeccCC--CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---
Confidence 5666788852 234556888888877 2222111122334433 4566677777 22 22222223333
Q ss_pred HhHHHHHHHHHHhcC-----CCCcEEEEEEehhHHHH-HHHhccCCC--ccEEEEcCCc
Q 023299 119 KDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTS-LLYGAEDPS--IAGMVLDSAF 169 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~-----~~~~i~l~G~S~Gg~~a-~~~a~~~p~--v~~lil~~~~ 169 (284)
.-|.+-+++|++++. ..++|.|+|.|.|++-. +++.+=..+ ++..|+.++.
T Consensus 196 l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 196 LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 678888999998884 23899999999999844 444432222 7788887663
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.64 E-value=0.021 Score=45.92 Aligned_cols=65 Identities=17% Similarity=0.201 Sum_probs=44.9
Q ss_pred CcEEEEEcCCCCCCCCC-----CcccCCcc-cHhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhccC
Q 023299 93 NITLFTLDFSGSGLSDG-----DYVSLGWH-EKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 93 g~~v~~~d~~g~G~S~~-----~~~~~~~~-~~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
-.+|+++-||--....- .....-.. -..|+.++.++.+++... .+++|.|||.|+.+...+..++
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 46899998884321110 00000011 168999999988888655 6899999999999999998764
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.58 E-value=0.19 Score=46.07 Aligned_cols=125 Identities=15% Similarity=0.095 Sum_probs=76.9
Q ss_pred CcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHH----HHHHhhCCcEEEEEcCCCCCCCCCC-ccc--C-----
Q 023299 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----AVILLPSNITLFTLDFSGSGLSDGD-YVS--L----- 114 (284)
Q Consensus 47 g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~----~~~l~~~g~~v~~~d~~g~G~S~~~-~~~--~----- 114 (284)
...|...+++|. .+ +. -++.+-|++-+....... ...-..+||.++.-|- ||..+... ... .
T Consensus 14 ~~~i~fev~LP~-~W---Ng-R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~ 87 (474)
T PF07519_consen 14 APNIRFEVWLPD-NW---NG-RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEAL 87 (474)
T ss_pred cceEEEEEECCh-hh---cc-CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHH
Confidence 348888899997 23 22 244444444322211111 2334467999999986 55433221 111 1
Q ss_pred ---CcccHhHHHHHHHHHHhcC---CCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHHH
Q 023299 115 ---GWHEKDDLKVVVSYLRGNK---QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (284)
Q Consensus 115 ---~~~~~~d~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~~ 177 (284)
+++.+.++..+-+.+.+.+ ..++-...|-|-||.-++..|.++|+ ++++|.-+|..++.....
T Consensus 88 ~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~~~ 157 (474)
T PF07519_consen 88 LDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHLQL 157 (474)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHHHH
Confidence 1112333444444444442 33788999999999999999999998 999999999988766543
No 210
>PLN00413 triacylglycerol lipase
Probab=95.46 E-value=0.022 Score=51.25 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhc
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
++...+..+.++.+..++++.|||+||++|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45666666666666789999999999999998874
No 211
>PLN02571 triacylglycerol lipase
Probab=95.36 E-value=0.023 Score=50.42 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHhcCCCC--cEEEEEEehhHHHHHHHhcc
Q 023299 120 DDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+++.+.++.+.++++.+ +|++.||||||++|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45556666666655443 79999999999999988764
No 212
>PLN02162 triacylglycerol lipase
Probab=95.32 E-value=0.026 Score=50.58 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhc
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+.+.++.+.++.+..++++.|||+||++|..++.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 44555555555555679999999999999988754
No 213
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.29 E-value=0.52 Score=37.04 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=36.4
Q ss_pred HhHHHHHHHHHHhcC-CCCcEEEEEEehhHHHHHHHhccCC-CccEEEEcCC
Q 023299 119 KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSA 168 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~lil~~~ 168 (284)
..++...++-|.... +..++.++|||+|+.++-..+...+ .+..+|+++.
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GS 142 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECC
Confidence 455666666665554 3479999999999999998877633 3888887754
No 214
>PLN02934 triacylglycerol lipase
Probab=95.26 E-value=0.025 Score=51.19 Aligned_cols=36 Identities=14% Similarity=0.305 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhc
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
..+...++.++++.+..++++.|||+||++|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 346677777777767789999999999999998864
No 215
>PLN02408 phospholipase A1
Probab=95.24 E-value=0.028 Score=49.17 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhcc
Q 023299 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+++.+.++.+.+.++. .+|++.|||+||++|..+|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455666666666554 369999999999999988765
No 216
>PLN02324 triacylglycerol lipase
Probab=94.78 E-value=0.043 Score=48.72 Aligned_cols=37 Identities=27% Similarity=0.304 Sum_probs=27.9
Q ss_pred HhHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhc
Q 023299 119 KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+.+.+.+..+.++++. -+|++.|||+||++|+..|.
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34566666667666554 37999999999999998875
No 217
>PLN02310 triacylglycerol lipase
Probab=94.67 E-value=0.041 Score=48.73 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHhcCC----CCcEEEEEEehhHHHHHHHhcc
Q 023299 120 DDLKVVVSYLRGNKQ----TSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+.+.+.+..+.+.+. ..+|.+.||||||++|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344455555554432 3589999999999999988743
No 218
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.66 E-value=0.13 Score=46.43 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=61.6
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHH----Hhh--------------CCcEEEEEc-CCCCCCCCC--CcccC-CcccHh
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVI----LLP--------------SNITLFTLD-FSGSGLSDG--DYVSL-GWHEKD 120 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~----l~~--------------~g~~v~~~d-~~g~G~S~~--~~~~~-~~~~~~ 120 (284)
..++|+++.+.|++|+.+.+-.+.+. +.. ..-.++-+| --|.|.|.. +.... .+....
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 44689999999999999987655321 000 123677888 458888874 21111 122256
Q ss_pred HHHHHHHHHHhcCC----C-CcEEEEEEehhHHHHHHHhcc
Q 023299 121 DLKVVVSYLRGNKQ----T-SRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 121 d~~~~i~~~~~~~~----~-~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
|+..+.+.+.+.+. . .+.+|+|-|+||.=+..+|..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 77777766655432 2 588999999999977777654
No 219
>PLN02753 triacylglycerol lipase
Probab=94.33 E-value=0.061 Score=49.00 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=27.7
Q ss_pred HhHHHHHHHHHHhcCC-----CCcEEEEEEehhHHHHHHHhc
Q 023299 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+++.+.++.+.++++ .-+|.+.|||+||++|+..|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4456666666666553 258999999999999998874
No 220
>PLN02802 triacylglycerol lipase
Probab=94.28 E-value=0.066 Score=48.62 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHhcCCC--CcEEEEEEehhHHHHHHHhcc
Q 023299 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+++.+.+..+.+.++. .+|++.|||+||++|+..|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3455556666665543 379999999999999988764
No 221
>PLN02719 triacylglycerol lipase
Probab=94.15 E-value=0.07 Score=48.47 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=27.4
Q ss_pred HhHHHHHHHHHHhcCCC-----CcEEEEEEehhHHHHHHHhc
Q 023299 119 KDDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+++.+.++.+.++++. .+|.+.|||+||++|+..|.
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34566666666665542 48999999999999998774
No 222
>PLN02761 lipase class 3 family protein
Probab=94.14 E-value=0.071 Score=48.55 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=27.6
Q ss_pred HhHHHHHHHHHHhcCC------CCcEEEEEEehhHHHHHHHhc
Q 023299 119 KDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+++.+.++.+.+.++ .-+|.+.||||||++|+..|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4456666666666552 247999999999999998774
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.12 E-value=0.059 Score=49.01 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCC----CCcEEEEEEehhHHHHHHHhcc
Q 023299 121 DLKVVVSYLRGNKQ----TSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 121 d~~~~i~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
++.+.+..+.+.+. ..+|.+.||||||++|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34444444444332 2479999999999999988743
No 224
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.02 E-value=0.38 Score=48.06 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=65.6
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l~G 142 (284)
...|+++|+|-.-|....+..++..+ ..|.+|.......+.. .++++.+ .|+.+++-.+..+..++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~d--Sies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLD--SIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcc--hHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 35789999999988877777777655 4566665443333321 1455433 345665555558899999
Q ss_pred EehhHHHHHHHhccCCC---ccEEEEcCCccCH
Q 023299 143 RSMGAVTSLLYGAEDPS---IAGMVLDSAFSDL 172 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p~---v~~lil~~~~~~~ 172 (284)
+|+|+.++..+|....+ .+.+|+..+...+
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999998876432 6678888765433
No 225
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.94 E-value=0.14 Score=44.40 Aligned_cols=138 Identities=14% Similarity=-0.025 Sum_probs=83.1
Q ss_pred CCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCC-ccCHHHHHHHHHHHHcccCChhHHHHHHHHHHh---hhhccCC
Q 023299 133 KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA-FSDLFDLMLELVDVYKIRLPKFTMAVQYMRRVI---QKKAKFD 208 (284)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 208 (284)
..+..+++-|-|--|+.++.-|...|++.++|-... ..+....+....+.++...|--. ...+..... .....-.
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l-~pyyaegi~erl~tp~fkq 309 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKL-APYYAEGIDERLETPLFKQ 309 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCccc-chhHhhhHHHhhcCHHHHH
Confidence 456889999999999999999999998877775443 34666666666555553222110 011111111 0000000
Q ss_pred -CCCCcHHHHHHHHHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCCC
Q 023299 209 -IMDLNCLKSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDE 271 (284)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 271 (284)
..-.+++.-.-......+..+..++.++.||+..+..+......++....+..+||..|+...
T Consensus 310 L~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 310 LLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred HHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH
Confidence 000111111111123455667778888888888787777788888777788999999998754
No 226
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.83 E-value=0.15 Score=44.98 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=75.9
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCc----ccHhHHHHHHHHHHhcCCCCcEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW----HEKDDLKVVVSYLRGNKQTSRIG 139 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~----~~~~d~~~~i~~~~~~~~~~~i~ 139 (284)
..+|+|+...|.+........-...|. +-+-+.+.+|=+|.|...+.+... +.+.|.-.+++.++..+ ..+.+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY-~~kWI 137 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY-PGKWI 137 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc-cCCce
Confidence 457999999999875543333333343 356788899999999876655432 34778888888887764 47889
Q ss_pred EEEEehhHHHHHHHhccCCC-ccEEEEc-CC
Q 023299 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLD-SA 168 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p~-v~~lil~-~~ 168 (284)
=-|.|-||+.++.+=..+|+ +++.|.- +|
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99999999999999888997 8887764 44
No 227
>PLN02847 triacylglycerol lipase
Probab=93.57 E-value=0.1 Score=48.21 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
..+..+....+.-++++.||||||.+|..++..
T Consensus 239 ~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 239 PCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 334444455555799999999999999877653
No 228
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.51 E-value=0.098 Score=45.72 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
..+.+.++.+..+++.-+|.+.|||+||++|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 6788888888888887899999999999999887754
No 229
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=93.44 E-value=0.17 Score=36.57 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=22.3
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhhHHHH
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA 85 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~~~~~ 85 (284)
+|..|+..+..+. +....++||+||++|+--++..+
T Consensus 76 ~g~~iHFih~rs~----~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 76 DGLDIHFIHVRSK----RPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TTEEEEEEEE--S-----TT-EEEEEE--SS--GGGGHHH
T ss_pred eeEEEEEEEeeCC----CCCCeEEEEECCCCccHHhHHhh
Confidence 6999998777653 45678999999999988776554
No 230
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.33 E-value=0.4 Score=41.61 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=52.6
Q ss_pred EEEEEcCC-CCCCCCCCcccCCcc---cHhHHHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhcc----C-----C
Q 023299 95 TLFTLDFS-GSGLSDGDYVSLGWH---EKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAE----D-----P 158 (284)
Q Consensus 95 ~v~~~d~~-g~G~S~~~~~~~~~~---~~~d~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~----~-----p 158 (284)
+++-+|.| |.|.|-......... .+.|+..+++.+.++.+. .++.|.|-|.||.-+..+|.. . +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 889886543221111 256677777666655443 789999999999866555542 1 2
Q ss_pred --CccEEEEcCCccCH
Q 023299 159 --SIAGMVLDSAFSDL 172 (284)
Q Consensus 159 --~v~~lil~~~~~~~ 172 (284)
+++++++-+|.++.
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 28899999887654
No 231
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.18 E-value=0.2 Score=41.93 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCC
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
..++.+.+.-+++.++..+|.|-|||+||++|..+..++. +-.+...+|
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 4556666667777778899999999999999998887764 334443343
No 232
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.18 E-value=0.2 Score=41.93 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=36.2
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCCccEEEEcCC
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
..++.+.+.-+++.++..+|.|-|||+||++|..+..++. +-.+...+|
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 4556666667777778899999999999999998887764 334443343
No 233
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.61 E-value=0.4 Score=37.14 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCccCHHHHH
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~~~~~~~~ 176 (284)
-.+.-+|+++..-.....+-|-||||..|+.+.-++|+ +.++|..++..+..+..
T Consensus 87 H~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardff 142 (227)
T COG4947 87 HRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFF 142 (227)
T ss_pred HHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhc
Confidence 33444566665333567789999999999999999999 88999999988876543
No 234
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=92.26 E-value=1 Score=38.20 Aligned_cols=38 Identities=26% Similarity=0.364 Sum_probs=32.0
Q ss_pred HhHHHHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhcc
Q 023299 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
...+..++.++.+++.. ++|.++|+|-|+++|-.++..
T Consensus 74 ~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 56788888898888754 899999999999999888754
No 235
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.59 E-value=0.62 Score=40.68 Aligned_cols=38 Identities=24% Similarity=0.180 Sum_probs=28.6
Q ss_pred CCCcEEEEEEehhHHHHHHHhccCC---C---ccEEEEcCCccC
Q 023299 134 QTSRIGLWGRSMGAVTSLLYGAEDP---S---IAGMVLDSAFSD 171 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~a~~~p---~---v~~lil~~~~~~ 171 (284)
+..++.|+|||+|+.+......... . |+.+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 4578999999999998876654422 1 788999876543
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.25 E-value=1.8 Score=35.49 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=19.1
Q ss_pred CCcEEEEEEehhHHHHHHHhcc
Q 023299 135 TSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 135 ~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
.++++++|+|+|+.++...+.+
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHH
Confidence 3789999999999999887655
No 237
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=87.15 E-value=5.3 Score=34.40 Aligned_cols=92 Identities=16% Similarity=0.089 Sum_probs=59.5
Q ss_pred CCccEEEEECCCCCCh-----hhHHHHHHHHhh-CCcEEEEEcCCCCCCCCCCc--------------ccCCcccHhHHH
Q 023299 64 TPLPCVVYCHGNSGCR-----ADANEAAVILLP-SNITLFTLDFSGSGLSDGDY--------------VSLGWHEKDDLK 123 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~-----~~~~~~~~~l~~-~g~~v~~~d~~g~G~S~~~~--------------~~~~~~~~~d~~ 123 (284)
..+..|+.+-|....- .....+...|.. .+-.++++=-+|-|.-.-+. ...+|.....+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3466777777754221 122333344433 57788887777776432100 112333467788
Q ss_pred HHHHHHHhcCCC-CcEEEEEEehhHHHHHHHhc
Q 023299 124 VVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 124 ~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~ 155 (284)
.+..++..++.. ++|.++|+|-|+++|-.+|.
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHH
Confidence 999999999877 99999999999999977664
No 238
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=87.12 E-value=4 Score=32.88 Aligned_cols=63 Identities=21% Similarity=0.246 Sum_probs=44.0
Q ss_pred CCCccEEEEECCCCCChhhHHHHHH-HHhhCCc-EEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEE
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAV-ILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~-~l~~~g~-~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l 140 (284)
++..-+|+++||...+........+ .+.+.|| +|+....-| .-++..++++++++ ++..+.|
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~---------------yP~~d~vi~~l~~~-~~~~v~L 198 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG---------------YPLVDTVIEYLRKN-GIKEVHL 198 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC---------------CCcHHHHHHHHHHc-CCceEEE
Confidence 3567899999999988876656655 4566788 666655543 24477788999887 6666655
Q ss_pred E
Q 023299 141 W 141 (284)
Q Consensus 141 ~ 141 (284)
+
T Consensus 199 ~ 199 (265)
T COG4822 199 I 199 (265)
T ss_pred e
Confidence 5
No 239
>PF03283 PAE: Pectinacetylesterase
Probab=85.12 E-value=8.6 Score=34.03 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=30.4
Q ss_pred HhHHHHHHHHHHhc-CC-CCcEEEEEEehhHHHHHHHhc
Q 023299 119 KDDLKVVVSYLRGN-KQ-TSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 119 ~~d~~~~i~~~~~~-~~-~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
..-+.++++++.++ ++ .++++|.|.|.||.-++..+.
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 56788999999887 44 389999999999998876543
No 240
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=82.11 E-value=0.1 Score=44.00 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=70.3
Q ss_pred CccEEEEECCCCCChhhHHHHH-HHHhhCCcEEEEEcCCCCCCCCCCcccCCcc-cHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~-~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~-~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
....++..||...+......+. ..+...++.++..|+++++.+.+.....++. +..++..++.+........+++++|
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 166 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWG 166 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhccccee
Confidence 4566888899865555443333 4556678999999999999998666555543 1333333333332212346899999
Q ss_pred EehhHHHHHHHhccC----CC-ccEEEEcCCccCH
Q 023299 143 RSMGAVTSLLYGAED----PS-IAGMVLDSAFSDL 172 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~----p~-v~~lil~~~~~~~ 172 (284)
.|+||..++...... +. +..++..++....
T Consensus 167 ~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (299)
T COG1073 167 ESLGGALALLLLGANPELARELIDYLITPGGFAPL 201 (299)
T ss_pred eccCceeeccccccchHHHHhhhhhhccCCCCCCC
Confidence 999999999876643 22 6666666666554
No 241
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.71 E-value=2.6 Score=32.40 Aligned_cols=76 Identities=21% Similarity=0.188 Sum_probs=48.4
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCc-EEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEe
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S 144 (284)
...||+.-|++...+....+. ...++ -++++|++..- ..+ |. .+ ...|.|+..|
T Consensus 11 d~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~--------ldf----Df-sA---------y~hirlvAwS 65 (214)
T COG2830 11 DHLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLN--------LDF----DF-SA---------YRHIRLVAWS 65 (214)
T ss_pred CEEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcC--------ccc----ch-hh---------hhhhhhhhhh
Confidence 458999999998888665544 23344 45679986421 110 11 11 2455789999
Q ss_pred hhHHHHHHHhccCCCccEEEEcC
Q 023299 145 MGAVTSLLYGAEDPSIAGMVLDS 167 (284)
Q Consensus 145 ~Gg~~a~~~a~~~p~v~~lil~~ 167 (284)
||-++|-++....+ ++..+.++
T Consensus 66 MGVwvAeR~lqg~~-lksatAiN 87 (214)
T COG2830 66 MGVWVAERVLQGIR-LKSATAIN 87 (214)
T ss_pred HHHHHHHHHHhhcc-ccceeeec
Confidence 99999998876655 55555554
No 242
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.36 E-value=21 Score=31.39 Aligned_cols=89 Identities=11% Similarity=-0.068 Sum_probs=51.1
Q ss_pred CCccEEEEECCCCCChh-hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCC--CCcEEE
Q 023299 64 TPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGL 140 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~--~~~i~l 140 (284)
.....||++=||.|+.+ ........+.+.|+.++.+-.+-+-..-. .....-........+..+.+.+. ..++++
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~--~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLS--ASRRILSLSLASTRLSELLSDYNSDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccc--cccccchhhHHHHHHHHHhhhccCCcCceEE
Confidence 34434444555555444 55667777888899999998886522111 11100112333344444444433 478899
Q ss_pred EEEehhHHHHHHHh
Q 023299 141 WGRSMGAVTSLLYG 154 (284)
Q Consensus 141 ~G~S~Gg~~a~~~a 154 (284)
.-+|+||...+...
T Consensus 114 h~FS~ng~~~~~si 127 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSI 127 (350)
T ss_pred EEecCCceeehHHH
Confidence 99999998766543
No 243
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=71.04 E-value=7.7 Score=28.64 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=22.9
Q ss_pred CCCccEEEEECCCCCChhhH--HHHHHHHhhCC
Q 023299 63 DTPLPCVVYCHGNSGCRADA--NEAAVILLPSN 93 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~--~~~~~~l~~~g 93 (284)
.+.+|.|+-+||+.|.+..+ .-+++.+.+.|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 45789999999999999865 34555655554
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.23 E-value=10 Score=34.83 Aligned_cols=42 Identities=19% Similarity=0.100 Sum_probs=30.9
Q ss_pred CCCCcEEEEEEehhHHHHHHHhc---cCCC---ccEEEEcCCccCHHH
Q 023299 133 KQTSRIGLWGRSMGAVTSLLYGA---EDPS---IAGMVLDSAFSDLFD 174 (284)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a~---~~p~---v~~lil~~~~~~~~~ 174 (284)
.+..+|.|+|+|+|+-+...... +..+ |..+|+.+.+.....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 36789999999999998875544 2222 889999987655443
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=67.48 E-value=41 Score=23.70 Aligned_cols=82 Identities=12% Similarity=-0.042 Sum_probs=47.5
Q ss_pred hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhH--HHHHHHhccCC
Q 023299 81 DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGA--VTSLLYGAEDP 158 (284)
Q Consensus 81 ~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg--~~a~~~a~~~p 158 (284)
.+..+.+.+...|+..=.+.++..|.+-......+.. +-=...++.+.+.++..+++|+|-|=-. -+-..++.++|
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~--~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE--EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCch--hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 3444445555567766667777765543322222211 1233445555566688999999999333 34455677788
Q ss_pred C-ccEEE
Q 023299 159 S-IAGMV 164 (284)
Q Consensus 159 ~-v~~li 164 (284)
+ |.++.
T Consensus 90 ~~i~ai~ 96 (100)
T PF09949_consen 90 GRILAIY 96 (100)
T ss_pred CCEEEEE
Confidence 7 77664
No 246
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=65.49 E-value=93 Score=27.14 Aligned_cols=131 Identities=18% Similarity=0.212 Sum_probs=80.8
Q ss_pred CCcEEEEEEEecCCCCCCCCccEEEEECCCCCChhh----HHHHHH----------HHhhCCcEEEEEcCC-CCCCCCCC
Q 023299 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD----ANEAAV----------ILLPSNITLFTLDFS-GSGLSDGD 110 (284)
Q Consensus 46 ~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~~~~~~----~~~~~~----------~l~~~g~~v~~~d~~-g~G~S~~~ 110 (284)
++.....++|.-... -...+|.++.+.|++|.... ++.+.. .+.+ ...++-+|-| |.|.|--+
T Consensus 12 ~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 12 TGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-DADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred cCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-hccEEEecCCCcCceeeec
Confidence 455666666554321 12457899999999875542 333321 1111 2456667766 77777422
Q ss_pred ccc---CCcc-cHhHHHHHHHHHHhcCC---CCcEEEEEEehhHHHHHHHhccC------C----CccEEEEcCCccCHH
Q 023299 111 YVS---LGWH-EKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED------P----SIAGMVLDSAFSDLF 173 (284)
Q Consensus 111 ~~~---~~~~-~~~d~~~~i~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~------p----~v~~lil~~~~~~~~ 173 (284)
-.. .... -+.|+..+++.+....+ ..++.|+-.|.||-+|..++... . ++.+++|-.+.++..
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 111 1111 16677777777765533 37899999999999998887653 2 277899988888777
Q ss_pred HHHHH
Q 023299 174 DLMLE 178 (284)
Q Consensus 174 ~~~~~ 178 (284)
+....
T Consensus 170 D~V~S 174 (414)
T KOG1283|consen 170 DFVFS 174 (414)
T ss_pred Hhhhc
Confidence 65443
No 247
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=65.40 E-value=45 Score=23.70 Aligned_cols=78 Identities=18% Similarity=0.276 Sum_probs=47.8
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEe
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S 144 (284)
..|+|||---+..-......+...+ .-.+.|+-.|-..+| .+++.++..+..+....+++|-|.+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~-~v~~~vvELD~~~~g--------------~eiq~~l~~~tg~~tvP~vFI~Gk~ 77 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDL-GVNPKVVELDEDEDG--------------SEIQKALKKLTGQRTVPNVFIGGKF 77 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhC-CCCCEEEEccCCCCc--------------HHHHHHHHHhcCCCCCCEEEECCEE
Confidence 4678888774443333333333331 235677777765433 3566666666544456899999999
Q ss_pred hhHHHHHHHhccC
Q 023299 145 MGAVTSLLYGAED 157 (284)
Q Consensus 145 ~Gg~~a~~~a~~~ 157 (284)
.||.--+......
T Consensus 78 iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 78 IGGASDLMALHKS 90 (104)
T ss_pred EcCHHHHHHHHHc
Confidence 9999776655443
No 248
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=64.15 E-value=4 Score=31.41 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=28.6
Q ss_pred EcCCCCCCCCCCcccCCcccHhHHHHHH----HHHHhcCC----CCcEEEEEEehhHH
Q 023299 99 LDFSGSGLSDGDYVSLGWHEKDDLKVVV----SYLRGNKQ----TSRIGLWGRSMGAV 148 (284)
Q Consensus 99 ~d~~g~G~S~~~~~~~~~~~~~d~~~~i----~~~~~~~~----~~~i~l~G~S~Gg~ 148 (284)
+-+-|||.........+......+...+ +.+.+..+ +++|.|+|-||+..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3344677663333333334477777777 66665542 37999999999987
No 249
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.02 E-value=8.9 Score=35.87 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=21.6
Q ss_pred HHHHHHHHHhc-CC-CCcEEEEEEehhHHHHHHHh
Q 023299 122 LKVVVSYLRGN-KQ-TSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 122 ~~~~i~~~~~~-~~-~~~i~l~G~S~Gg~~a~~~a 154 (284)
...+++.+... .+ ..+|+.+||||||..+=.+.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 33445555443 12 36899999999998875544
No 250
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=62.63 E-value=20 Score=28.27 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=30.7
Q ss_pred CCccEEEEECCCCCChhhH--HHHHHHHhhCCcEEEEEcC
Q 023299 64 TPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 101 (284)
+.++.||++-|.+|++.+- ..+.+.|.++|+.++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4578999999999888753 3455678889999999984
No 251
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=62.02 E-value=2.4 Score=30.05 Aligned_cols=43 Identities=5% Similarity=-0.045 Sum_probs=37.1
Q ss_pred hhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCCC
Q 023299 227 RCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNED 270 (284)
Q Consensus 227 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 270 (284)
..+.+++.+..|.+.+.+...++.+.+.. ..++.+++.||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCccee
Confidence 47888999999999999999999998875 68999999999653
No 252
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=57.99 E-value=1.4e+02 Score=26.83 Aligned_cols=92 Identities=10% Similarity=-0.058 Sum_probs=55.6
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc----------ccCCcc------c--------HhHHH
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDY----------VSLGWH------E--------KDDLK 123 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~----------~~~~~~------~--------~~d~~ 123 (284)
.|+++--...-..++..+.+.+.+.|..|+.+|.--.|.+.... ...++. + .+-+.
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 44554444445557777888888899999999986555443221 111111 0 11122
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 159 (284)
..+..+.++..+.=|+-+|-|.|..++..+....|-
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi 118 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI 118 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC
Confidence 222233333335778999999999999999887774
No 253
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=55.02 E-value=23 Score=26.20 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=22.6
Q ss_pred CccEEEEECCCCCCh-------------hhH-----------HHHHHHHhhCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGCR-------------ADA-----------NEAAVILLPSNITLFTL 99 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~-------------~~~-----------~~~~~~l~~~g~~v~~~ 99 (284)
....|||+||=..+. +.| ...+..|.+.|+.|+.+
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 357899999954221 122 23456688889998865
No 254
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=52.95 E-value=28 Score=26.96 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ +...-.+.|-|+|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4566666665 4556679999999999999988654
No 255
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=52.62 E-value=22 Score=30.00 Aligned_cols=72 Identities=7% Similarity=0.017 Sum_probs=47.7
Q ss_pred CccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEEE
Q 023299 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l~ 141 (284)
..|++|++.|+.+.+. ....+...+..+|+.|.++..+.-- +.... +-++-.......+|+|+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt~e--------------E~~~p~lWRfw~~lP~~G~i~IF 119 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPSAE--------------ELDHDFLWRIHKALPERGEIGIF 119 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHH--------------HHcCchHHHHHHhCCCCCeEEEE
Confidence 4699999999976554 6788889999999999998665210 11111 22344444444889888
Q ss_pred EEehhHHHH
Q 023299 142 GRSMGAVTS 150 (284)
Q Consensus 142 G~S~Gg~~a 150 (284)
=.|.=+-+.
T Consensus 120 ~RSWY~~vl 128 (264)
T TIGR03709 120 NRSHYEDVL 128 (264)
T ss_pred cCccccchh
Confidence 888554443
No 256
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.93 E-value=82 Score=26.83 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=26.2
Q ss_pred CcEEEEEEehhHHHHHHHhccCC----CccEEEEcCCcc
Q 023299 136 SRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (284)
Q Consensus 136 ~~i~l~G~S~Gg~~a~~~a~~~p----~v~~lil~~~~~ 170 (284)
.+++|+|.|+|++-+........ .+.+.+..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 68999999999987766544433 288888887753
No 257
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=50.33 E-value=58 Score=29.26 Aligned_cols=105 Identities=16% Similarity=0.112 Sum_probs=68.3
Q ss_pred CCCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCC--C-CcEE
Q 023299 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--T-SRIG 139 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~--~-~~i~ 139 (284)
+.....|+++.--.|..+.-...+..+.+.+.-|+-.|..++=.--+.........+.|+++..+++..... . ..-+
T Consensus 45 g~~~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PV 124 (456)
T COG3946 45 GDPQGLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPV 124 (456)
T ss_pred CCcceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccce
Confidence 345677888887777777666778888889999999998766322221111111225677776666644322 2 3457
Q ss_pred EEEEehhHHHHHHHhccCCC--ccEEEEcC
Q 023299 140 LWGRSMGAVTSLLYGAEDPS--IAGMVLDS 167 (284)
Q Consensus 140 l~G~S~Gg~~a~~~a~~~p~--v~~lil~~ 167 (284)
|.|---||.++...++.-|. +.+.+...
T Consensus 125 l~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 125 LTGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred EeecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 88888999999888877664 55555443
No 258
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=50.09 E-value=4 Score=32.65 Aligned_cols=56 Identities=7% Similarity=0.097 Sum_probs=36.6
Q ss_pred HHHhhhhhhccCcccCCCCCCccccccchHHHhhhhccccccccCccCC--CCCCccc
Q 023299 221 EIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNE--DEPSSFQ 276 (284)
Q Consensus 221 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~--~~p~~~~ 276 (284)
.....+..|.+++.+..|.+.+......+.+......+++.++++||.. +.|+.|.
T Consensus 215 ~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 272 (282)
T COG0596 215 AALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFA 272 (282)
T ss_pred hhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHH
Confidence 3456677999999999995554433333333333236788899999965 7776443
No 259
>PTZ00062 glutaredoxin; Provisional
Probab=49.94 E-value=1e+02 Score=24.81 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=50.4
Q ss_pred CccEEEEECCCCC--ChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSG--CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
+.|+|||..|... ...........|.+.|.....+|... -.++.+.+..........++.+-|
T Consensus 112 ~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~---------------d~~~~~~l~~~sg~~TvPqVfI~G 176 (204)
T PTZ00062 112 NHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFE---------------DPDLREELKVYSNWPTYPQLYVNG 176 (204)
T ss_pred cCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCC---------------CHHHHHHHHHHhCCCCCCeEEECC
Confidence 4789999999654 33344556666776676555556531 123444444443333348899999
Q ss_pred EehhHHHHHHHhccCCCcc
Q 023299 143 RSMGAVTSLLYGAEDPSIA 161 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p~v~ 161 (284)
.-+||.--+.-+.+..+++
T Consensus 177 ~~IGG~d~l~~l~~~G~L~ 195 (204)
T PTZ00062 177 ELIGGHDIIKELYESNSLR 195 (204)
T ss_pred EEEcChHHHHHHHHcCChh
Confidence 9999997776655554443
No 260
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=49.06 E-value=1.8e+02 Score=25.18 Aligned_cols=104 Identities=21% Similarity=0.183 Sum_probs=57.9
Q ss_pred CCCccEEEEECCCCCChhh-HHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEE
Q 023299 63 DTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
....|.|+++--+.|+... .....+.|.. ...|+.-|+-.--. .+...+.-+.+|.++.+-.+....+.+ +.++
T Consensus 100 r~pdPkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~---Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~ 174 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARM---VPLEAGHFDLDDYIDYVIEMINFLGPD-AHVM 174 (415)
T ss_pred cCCCCeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccce---eecccCCccHHHHHHHHHHHHHHhCCC-CcEE
Confidence 3457899999999998885 4555666654 35577767643211 111112112333333332233332433 6677
Q ss_pred EEehh-----HHHHHHHhccCCC-ccEEEEcCCccC
Q 023299 142 GRSMG-----AVTSLLYGAEDPS-IAGMVLDSAFSD 171 (284)
Q Consensus 142 G~S~G-----g~~a~~~a~~~p~-v~~lil~~~~~~ 171 (284)
+.+.- +++++..+...|. ...++++++..+
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 77754 4455545555665 788999987654
No 261
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=49.00 E-value=25 Score=28.92 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=48.2
Q ss_pred CccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEEE
Q 023299 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l~ 141 (284)
+.|+||++.|+.+.+. ....+...+-.+|+.|.++..|.-- +.... +-++-.......+|+|+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~e--------------E~~~p~lwRfw~~lP~~G~i~IF 94 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSDR--------------ERTQWYFQRYVQHLPAAGEIVLF 94 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHH--------------HHcChHHHHHHHhCCCCCeEEEE
Confidence 4699999999976554 6788888999999999988765210 11111 22344444444899999
Q ss_pred EEehhHHH
Q 023299 142 GRSMGAVT 149 (284)
Q Consensus 142 G~S~Gg~~ 149 (284)
=.|.=+-+
T Consensus 95 ~rSwY~~~ 102 (230)
T TIGR03707 95 DRSWYNRA 102 (230)
T ss_pred eCchhhhH
Confidence 88865554
No 262
>PRK10279 hypothetical protein; Provisional
Probab=48.60 E-value=30 Score=29.82 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=27.2
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
-..+++.+.+. ++..-.+.|-|+|+.++..+|...
T Consensus 20 hiGVL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 20 HIGVINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 34566777665 666678999999999999998754
No 263
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=47.64 E-value=48 Score=26.41 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=37.8
Q ss_pred CccEEEEECCCCCCh---hhHHHHHHHHhhCCcEEEEEcCC--CCCCCCCCcccCCcccHhHHHHHHHHHHhcC
Q 023299 65 PLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFS--GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~--g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~ 133 (284)
..++++++||..... ..-..+...|.+.|..+...-++ |||...... ..+-...+++|+.+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~------~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPEN------RRDWYERILDFFDKYL 210 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHH------HHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchh------HHHHHHHHHHHHHHHc
Confidence 468999999987533 34556777787888666666655 443332111 1344556666666543
No 264
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=46.81 E-value=39 Score=26.53 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ +...=.+.|-|.||.++..++....
T Consensus 15 ~Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 15 IGALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 4566666655 4444679999999999999987543
No 265
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=46.75 E-value=29 Score=29.35 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=28.5
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEc
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
...||++|-...+...+..++..|.++||.++.++
T Consensus 230 ~G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 230 PGAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CCcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 35688999877667778888899999999998764
No 266
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=46.37 E-value=37 Score=29.31 Aligned_cols=36 Identities=25% Similarity=0.198 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
-..+++.+.++ ++.-=.+.|-|+|+.++..+++..+
T Consensus 30 hiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 30 HIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34566677666 5655579999999999999988753
No 267
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=46.25 E-value=14 Score=37.85 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=45.7
Q ss_pred CCCccEEEEECCCCCChhhHH--------------HHHHHHhhCCcEEEEEcCCCCCCCCCCccc---CCcccHhHHHHH
Q 023299 63 DTPLPCVVYCHGNSGCRADAN--------------EAAVILLPSNITLFTLDFSGSGLSDGDYVS---LGWHEKDDLKVV 125 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~~--------------~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~---~~~~~~~d~~~~ 125 (284)
.+.+|+..++.|+|..+..+. +.++.+...|+.|+-+-.+ |.....+ .++-.+..++-+
T Consensus 496 ~~eRPiwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~----s~~~tfdn~l~sfvsitAiQia 571 (2376)
T KOG1202|consen 496 AGERPIWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTR----SDESTFDNILNSFVSITAIQIA 571 (2376)
T ss_pred CCCcceEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcC----CChHHHHHHHHHHHHHHHHHHH
Confidence 345899999999998776431 1223344446655533332 1111000 011124444445
Q ss_pred HHHHHhcCCCCcEEEEEEehhHH
Q 023299 126 VSYLRGNKQTSRIGLWGRSMGAV 148 (284)
Q Consensus 126 i~~~~~~~~~~~i~l~G~S~Gg~ 148 (284)
+-.+.+-+++.+=+++|||.|-.
T Consensus 572 LtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 572 LTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHhcCCCCCcccccccchh
Confidence 55556666888889999998754
No 268
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=46.21 E-value=29 Score=29.49 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=20.4
Q ss_pred cCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 132 NKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 132 ~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
..+..+-.++|||+|-+.|+.++..
T Consensus 78 ~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 78 SWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HcCCcccEEEecCHHHHHHHHHhCC
Confidence 3467788999999999999877654
No 269
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.89 E-value=45 Score=27.18 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.+. +...-.+.|-|.|+.++..++...+
T Consensus 16 ~GvL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 16 LGFLAALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3455666554 4555579999999999999987543
No 270
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=45.87 E-value=47 Score=22.13 Aligned_cols=39 Identities=13% Similarity=0.185 Sum_probs=28.8
Q ss_pred HhHHHHHHHHHHhcCC---CCcEEEEEEehhHHHHHHHhccC
Q 023299 119 KDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
...+.+.++|++++.. ..++-++|-|-|=.+|.+.++.+
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 5678888899888643 37899999999988887776654
No 271
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=44.91 E-value=23 Score=27.98 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=24.4
Q ss_pred cEEEEECCCC---CChhhHHHHHHHHhhCCcEEEEEc
Q 023299 67 PCVVYCHGNS---GCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 67 ~~vv~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
+.||++|.+. .+......++..|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4589999532 234456778888889999988764
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=44.39 E-value=31 Score=29.06 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=21.2
Q ss_pred HHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 129 LRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 129 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+++..++.+-.++|||+|=..|+.++..
T Consensus 76 l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 76 LKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3343237888999999999998887754
No 273
>PRK10824 glutaredoxin-4; Provisional
Probab=44.21 E-value=1.2e+02 Score=21.93 Aligned_cols=79 Identities=11% Similarity=0.116 Sum_probs=45.2
Q ss_pred CccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
+.++|||..|...... ........|.+.|...-.+|.-. -.++.+.+.......-+.+|++=|
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~---------------d~~~~~~l~~~sg~~TVPQIFI~G 78 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ---------------NPDIRAELPKYANWPTFPQLWVDG 78 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC---------------CHHHHHHHHHHhCCCCCCeEEECC
Confidence 5789999998653222 23344445555553322333310 023444444443333348999999
Q ss_pred EehhHHHHHHHhccCC
Q 023299 143 RSMGAVTSLLYGAEDP 158 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p 158 (284)
...||.--+..+.+..
T Consensus 79 ~~IGG~ddl~~l~~~G 94 (115)
T PRK10824 79 ELVGGCDIVIEMYQRG 94 (115)
T ss_pred EEEcChHHHHHHHHCC
Confidence 9999997776665544
No 274
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=42.87 E-value=36 Score=27.77 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=27.0
Q ss_pred ccEEEEECCCC-CChhhHHHHHHHHhhCCcEEEEEc
Q 023299 66 LPCVVYCHGNS-GCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 66 ~~~vv~~HG~~-~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
.+.||++|... .+.+.+..++..|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 45789999753 445567888889999999998764
No 275
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=42.86 E-value=1.1e+02 Score=21.12 Aligned_cols=79 Identities=11% Similarity=0.147 Sum_probs=46.1
Q ss_pred CccEEEEECCCCCC--hhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
+.++|||..|.... ..........|.+.|.....+|... -.++.+.+..........+|.+-|
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~---------------~~~~~~~l~~~tg~~tvP~vfi~g 75 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE---------------DPEIRQGIKEYSNWPTIPQLYVKG 75 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC---------------CHHHHHHHHHHhCCCCCCEEEECC
Confidence 46899999887322 2233445556667776655566521 022333333332332347888888
Q ss_pred EehhHHHHHHHhccCC
Q 023299 143 RSMGAVTSLLYGAEDP 158 (284)
Q Consensus 143 ~S~Gg~~a~~~a~~~p 158 (284)
...||.--+..+.+..
T Consensus 76 ~~iGG~ddl~~l~~~g 91 (97)
T TIGR00365 76 EFVGGCDIIMEMYQSG 91 (97)
T ss_pred EEEeChHHHHHHHHCc
Confidence 9999998776655443
No 276
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=42.67 E-value=69 Score=23.30 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=10.4
Q ss_pred HHHhhCCcEEEEE
Q 023299 87 VILLPSNITLFTL 99 (284)
Q Consensus 87 ~~l~~~g~~v~~~ 99 (284)
..|.+.|+.|+.+
T Consensus 101 ~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 101 SRLQELGWRVLRV 113 (117)
T ss_pred HHHHHCcCEEEEE
Confidence 4577889999976
No 277
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=40.93 E-value=47 Score=28.06 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
..+++.+.+. ++.-=.+.|-|+|+.++..+|...
T Consensus 26 iGVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 4566666555 565557999999999999998764
No 278
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=40.87 E-value=57 Score=25.06 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=27.1
Q ss_pred ccEEEEECCCCCChhhH--HHHHHHHhhCCcEEEEEcCC
Q 023299 66 LPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~ 102 (284)
+|.||++-|..|++..- ..+...|.+.|..|+..|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 47899999999888752 34556788889999998753
No 279
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=40.81 E-value=23 Score=30.59 Aligned_cols=29 Identities=17% Similarity=0.215 Sum_probs=22.1
Q ss_pred HHHHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 127 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
+.+ +..++.+-.++|||+|=+.|+.++..
T Consensus 76 ~~l-~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 76 RLL-RSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHH-HHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhh-cccccccceeeccchhhHHHHHHCCc
Confidence 444 34467888999999999999877654
No 280
>PRK12467 peptide synthase; Provisional
Probab=40.62 E-value=1.2e+02 Score=36.20 Aligned_cols=86 Identities=19% Similarity=0.144 Sum_probs=53.5
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
.+.++..|...+..-.+..++..+.. +..++.+..++.-.-.. ....+. .-.....++++...+..+..+.|+|+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~--~~~~~~--~~~~~y~~~~~~~~~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW--QDTSLQ--AMAVQYADYILWQQAKGPYGLLGWSL 3766 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC--CccchH--HHHHHHHHHHHHhccCCCeeeeeeec
Confidence 45699999998887777677666643 56777776654321111 111121 12233445554444446788999999
Q ss_pred hHHHHHHHhcc
Q 023299 146 GAVTSLLYGAE 156 (284)
Q Consensus 146 Gg~~a~~~a~~ 156 (284)
||.++..++..
T Consensus 3767 g~~~a~~~~~~ 3777 (3956)
T PRK12467 3767 GGTLARLVAEL 3777 (3956)
T ss_pred chHHHHHHHHH
Confidence 99999888764
No 281
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=40.51 E-value=42 Score=28.49 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=19.8
Q ss_pred CCCCcEEEEEEehhHHHHHHHhcc
Q 023299 133 KQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 133 ~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
.+..+..++|||+|=..|+.++..
T Consensus 73 ~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 73 LLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred cCCCCcEEeecCHHHHHHHHHhCC
Confidence 366888999999999998887653
No 282
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=39.64 E-value=46 Score=25.83 Aligned_cols=36 Identities=19% Similarity=0.046 Sum_probs=28.7
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEc
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
..+.|+++-|.+.++.+-...++.|.++|+.|..+-
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEE
Confidence 457788888888888888889999999999988843
No 283
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=39.32 E-value=21 Score=29.87 Aligned_cols=20 Identities=25% Similarity=0.512 Sum_probs=15.4
Q ss_pred CCCcEEEEEEehhHHHHHHH
Q 023299 134 QTSRIGLWGRSMGAVTSLLY 153 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~a~~~ 153 (284)
.+..|+++|||+|..=...+
T Consensus 233 ~i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CCCEEEEEeCCCchhhHHHH
Confidence 45899999999998654443
No 284
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.69 E-value=58 Score=26.32 Aligned_cols=35 Identities=26% Similarity=0.281 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.+. +..-=.+.|.|.|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 14 AGVLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3466666665 4444479999999999999998765
No 285
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.25 E-value=61 Score=26.65 Aligned_cols=35 Identities=20% Similarity=0.088 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCC--cEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ ++. .-.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 4567777766 443 4479999999999999987653
No 286
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=37.48 E-value=1.2e+02 Score=29.10 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=41.7
Q ss_pred CCccEEEEECCCCCChh---hHHHHHHHHhhCCcEEEEEcCC--CCCCCCCCcccCCcccHhHHHHHHHHHHhcC
Q 023299 64 TPLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFS--GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~--g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~ 133 (284)
.-+.+++++||.....- .-..+...|..+|..|-..-++ ||+.+.. .. ...-+..+++|+.+..
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~--~~----~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP--EN----RVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc--hh----HHHHHHHHHHHHHHHh
Confidence 34678999999875333 4556677787789888877777 4454441 11 1456677777776543
No 287
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=37.41 E-value=18 Score=29.69 Aligned_cols=73 Identities=14% Similarity=0.194 Sum_probs=42.9
Q ss_pred CccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEEE
Q 023299 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l~ 141 (284)
+.|++|++.|+.+++. ....+...+-.+|+.|.++..|.-- +.... +-++-.......+|+++
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt~e--------------E~~~p~lwRfw~~lP~~G~I~if 94 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPTDE--------------ELRRPFLWRFWRALPARGQIGIF 94 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--HH--------------HHTS-TTHHHHTTS--TT-EEEE
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCChh--------------HcCCCcHHHHHHhCCCCCEEEEE
Confidence 3579999999987666 4677777888899999998875211 11111 22344444444889999
Q ss_pred EEehhHHHHH
Q 023299 142 GRSMGAVTSL 151 (284)
Q Consensus 142 G~S~Gg~~a~ 151 (284)
=.|.=.-+..
T Consensus 95 ~rSWY~~~l~ 104 (228)
T PF03976_consen 95 DRSWYEDVLV 104 (228)
T ss_dssp ES-GGGGGTH
T ss_pred ecchhhHHHH
Confidence 8886655443
No 288
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=36.90 E-value=80 Score=24.44 Aligned_cols=35 Identities=26% Similarity=0.212 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ +..-=.+.|-|.|+.++..++....
T Consensus 16 ~Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 16 IGVLRALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4456666555 4555589999999999999987654
No 289
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.45 E-value=82 Score=24.29 Aligned_cols=34 Identities=26% Similarity=0.177 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
..+++.+.++ +...=.+.|-|.|+.++..++...
T Consensus 16 ~Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 4556666554 344457999999999999998654
No 290
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.95 E-value=1.1e+02 Score=25.62 Aligned_cols=57 Identities=14% Similarity=0.228 Sum_probs=41.7
Q ss_pred HHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcc--cHhHHHHHHHHHHhcCCCCcEEEEEE
Q 023299 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH--EKDDLKVVVSYLRGNKQTSRIGLWGR 143 (284)
Q Consensus 84 ~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~--~~~d~~~~i~~~~~~~~~~~i~l~G~ 143 (284)
.++....++|+.++.+-+++.-.-+ ...+.+. .+-++-.++.+++.+ +++++++.|-
T Consensus 19 ~va~~a~~~G~~~~ii~l~~eaD~~--~~~~e~~~~~iG~vg~lik~l~~~-~v~~vVl~G~ 77 (279)
T COG3494 19 EVAENARNQGYAPFIIGLRGEADPE--LKEFEYKEVSIGEVGKLIKLLKTE-GVDRVVLAGG 77 (279)
T ss_pred HHHHHHHhCCCCcEEEEecCccchh--hhcCCCeEEeHHHHHHHHHHHHHc-CCcEEEEecc
Confidence 5677778899999999998643322 2333333 277899999999887 7899998873
No 291
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=35.95 E-value=2.1e+02 Score=24.84 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=52.3
Q ss_pred EEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcc---cCCcccHhHHHHHHHHHHhcCCCCc------EEE
Q 023299 70 VYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV---SLGWHEKDDLKVVVSYLRGNKQTSR------IGL 140 (284)
Q Consensus 70 v~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~---~~~~~~~~d~~~~i~~~~~~~~~~~------i~l 140 (284)
|++-|+.|-..+ ..+..|.+.||.|+.+|-.-.|....-.. ..-..++.|-..+-+.+.++ .++- ...
T Consensus 3 iLVtGGAGYIGS--Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~~ 79 (329)
T COG1087 3 VLVTGGAGYIGS--HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASIS 79 (329)
T ss_pred EEEecCcchhHH--HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEECccccc
Confidence 344444443332 34556778999999999887665442111 11112355544444444333 4432 245
Q ss_pred EEEe-----------hhHHHHHHHhccCCCccEEEEcCC
Q 023299 141 WGRS-----------MGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 141 ~G~S-----------~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
+|-| .+|.+.+.-+.+.-.|+.+|-.|.
T Consensus 80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 80 VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred cchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc
Confidence 6666 356666655555545888887654
No 292
>PRK02399 hypothetical protein; Provisional
Probab=35.65 E-value=3.4e+02 Score=24.57 Aligned_cols=90 Identities=16% Similarity=0.107 Sum_probs=52.0
Q ss_pred EEECCCCC-ChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCc----------ccCCcc------c----HhH----HHH
Q 023299 70 VYCHGNSG-CRADANEAAVILLPSNITLFTLDFSGSGLSDGDY----------VSLGWH------E----KDD----LKV 124 (284)
Q Consensus 70 v~~HG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~----------~~~~~~------~----~~d----~~~ 124 (284)
|++=|... -.+++..+.+.+.+.|..|+.+|.-..|...... ...++. + .+- +..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 44445444 4446766777787889999999984444221100 001110 0 111 112
Q ss_pred HHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC
Q 023299 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS 159 (284)
Q Consensus 125 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 159 (284)
.+..+.++..+.-++-+|-|.|..++..+....|-
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPi 120 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPI 120 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCC
Confidence 22222233345778999999999999999888774
No 293
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=35.01 E-value=39 Score=24.02 Aligned_cols=31 Identities=19% Similarity=0.267 Sum_probs=23.7
Q ss_pred EEEECCCCCChhhHHHHHHHHhhC-CcEEEEEcC
Q 023299 69 VVYCHGNSGCRADANEAAVILLPS-NITLFTLDF 101 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 101 (284)
||++.|.+|++.+. ++..|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecc
Confidence 68889999888865 45555554 999998887
No 294
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=34.12 E-value=3.2e+02 Score=23.87 Aligned_cols=100 Identities=17% Similarity=0.046 Sum_probs=54.6
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCC--cEEEEEcCCCCCCCCCC-----------c-ccCCcccHhHHHHHHHHHHhcC
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSN--ITLFTLDFSGSGLSDGD-----------Y-VSLGWHEKDDLKVVVSYLRGNK 133 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~G~S~~~-----------~-~~~~~~~~~d~~~~i~~~~~~~ 133 (284)
-=|+++|.|+-..-...++..+.... ..|+.++--.-+.+-.. . ...+-...+.+..+++++.+..
T Consensus 55 FnlL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 55 FNLLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred CeEEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 34677777777777777777665542 44555552211111100 0 0111111344555666665553
Q ss_pred CCCcEEEEEEehhHHH--------HHHHhccCCCccEEEEcC
Q 023299 134 QTSRIGLWGRSMGAVT--------SLLYGAEDPSIAGMVLDS 167 (284)
Q Consensus 134 ~~~~i~l~G~S~Gg~~--------a~~~a~~~p~v~~lil~~ 167 (284)
...+++|+=|++=|-. ++...+..|+|.-+..+.
T Consensus 135 ~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASiD 176 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASID 176 (326)
T ss_pred CCCceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEecc
Confidence 3689999999976655 344445577777666654
No 295
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=34.06 E-value=51 Score=28.56 Aligned_cols=30 Identities=17% Similarity=0.103 Sum_probs=22.6
Q ss_pred HHHHHhcC-CCCcEEEEEEehhHHHHHHHhc
Q 023299 126 VSYLRGNK-QTSRIGLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 126 i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~ 155 (284)
++.+.++. +..+.++.|||+|=+.|+.++.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 34444443 4678899999999999987766
No 296
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=33.97 E-value=20 Score=28.64 Aligned_cols=41 Identities=7% Similarity=-0.022 Sum_probs=30.3
Q ss_pred hhhccCcccCCCCCCccccccchHHHhh----hhccccccccCcc
Q 023299 227 RCASTDAASSSSAPPSILTAKPVDELLS----EAVPIASKENSAV 267 (284)
Q Consensus 227 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH 267 (284)
+.+.+.+.|+.||+..+-.+.....+.. ....-.+.++|||
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GH 178 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGH 178 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCe
Confidence 3466678999999999987777777753 2233466699999
No 297
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=33.36 E-value=80 Score=21.56 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=21.3
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCC
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSG 103 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 103 (284)
+.+++||+|+++..+ ...+..|.+.||. +.++.|
T Consensus 60 ~~~~ivv~C~~G~rs----~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAKEGSS----QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCCCCcH----HHHHHHHHHcCce--eEEeCC
Confidence 356788888765432 3455667788998 344443
No 298
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.95 E-value=59 Score=27.93 Aligned_cols=33 Identities=27% Similarity=0.228 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 124 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
-+++.|.+. ++..-++.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEA-GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHc-CCCccEEEecCHHHHHHHHHHcCC
Confidence 344555444 577778999999999999998754
No 299
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=32.90 E-value=68 Score=20.93 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=17.2
Q ss_pred ccEEEEECCCCCChhhHHHHHHHH-hhCCcEEEE
Q 023299 66 LPCVVYCHGNSGCRADANEAAVIL-LPSNITLFT 98 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l-~~~g~~v~~ 98 (284)
.|.++++||+...+.+ .++..+ .++|+.++.
T Consensus 31 ~~~~~lvhGga~~GaD--~iA~~wA~~~gv~~~~ 62 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGAD--RIAARWARERGVPVIR 62 (71)
T ss_pred CCCEEEEECCCCCCHH--HHHHHHHHHCCCeeEE
Confidence 4778899998832222 233322 345766554
No 300
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.56 E-value=1.4e+02 Score=27.60 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=51.0
Q ss_pred EEECCCCCChhhHHHHH-HHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHH
Q 023299 70 VYCHGNSGCRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (284)
Q Consensus 70 v~~HG~~~~~~~~~~~~-~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 148 (284)
+|--|++.+.......+ +.....||.|+.+|-.|.-.. -.-+...+..+.+....+.|..+|.-+=|.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~-----------~~~lm~~l~k~~~~~~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN-----------NAPLMTSLAKLIKVNKPDLILFVGEALVGN 510 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC-----------ChhHHHHHHHHHhcCCCceEEEehhhhhCc
Confidence 34445555544333333 334456999999998763211 123444455555554678999999988887
Q ss_pred HHHHHhccC---------CC-ccEEEEc
Q 023299 149 TSLLYGAED---------PS-IAGMVLD 166 (284)
Q Consensus 149 ~a~~~a~~~---------p~-v~~lil~ 166 (284)
-++.-+.++ |. ++++|+.
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 776554332 23 7777763
No 301
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=32.39 E-value=72 Score=27.61 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=16.8
Q ss_pred EEEEEehhHHHHHHHhccC
Q 023299 139 GLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 139 ~l~G~S~Gg~~a~~~a~~~ 157 (284)
.+.|-|+||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6999999999999998754
No 302
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=31.99 E-value=58 Score=27.79 Aligned_cols=31 Identities=26% Similarity=0.610 Sum_probs=25.3
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCC
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 102 (284)
.-|.++|.-|.++ ..+.++..||.|+..|+-
T Consensus 251 ~vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSGG-------ALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcch-------HHHHHHhcCCcEEeeccc
Confidence 3589999999876 556678889999999984
No 303
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=31.95 E-value=1.9e+02 Score=23.92 Aligned_cols=93 Identities=15% Similarity=0.082 Sum_probs=54.9
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcC-CCCcEEEEEEehh
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK-QTSRIGLWGRSMG 146 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~-~~~~i~l~G~S~G 146 (284)
..+-+|-+-.. ...++.+...+..|+..|+-|--..-.+-.... ..++|....+.++.+.. .+-+-+.+|-+.|
T Consensus 89 l~inaHvGfvd----E~~~eklk~~~vdvvsLDfvgDn~vIk~vy~l~-ksv~dyl~~l~~L~e~~irvvpHitiGL~~g 163 (275)
T COG1856 89 LLINAHVGFVD----ESDLEKLKEELVDVVSLDFVGDNDVIKRVYKLP-KSVEDYLRSLLLLKENGIRVVPHITIGLDFG 163 (275)
T ss_pred eEEEEEeeecc----HHHHHHHHHhcCcEEEEeecCChHHHHHHHcCC-ccHHHHHHHHHHHHHcCceeceeEEEEeccC
Confidence 44555543333 234455666778899999976321111111111 12778888888887763 2356689999998
Q ss_pred HH----HHHHHhccCCCccEEEEc
Q 023299 147 AV----TSLLYGAEDPSIAGMVLD 166 (284)
Q Consensus 147 g~----~a~~~a~~~p~v~~lil~ 166 (284)
+. -|+.+..+++ .+++|++
T Consensus 164 ki~~e~kaIdiL~~~~-~DalVl~ 186 (275)
T COG1856 164 KIHGEFKAIDILVNYE-PDALVLV 186 (275)
T ss_pred cccchHHHHHHHhcCC-CCeEEEE
Confidence 75 4666666554 5555554
No 304
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=31.64 E-value=72 Score=28.97 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
-..+++.+.++ +...=++.|-|.|+.+|..++...+
T Consensus 88 hiGVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 88 HIGVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCH
Confidence 34566777665 4444479999999999999988543
No 305
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=31.41 E-value=3.4e+02 Score=23.36 Aligned_cols=105 Identities=13% Similarity=0.207 Sum_probs=57.4
Q ss_pred CCCccEEEEECCCCCChhh--HHHHHHHHhhCCcEEEEEcC--C-------CC------------------CCCCCCccc
Q 023299 63 DTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDF--S-------GS------------------GLSDGDYVS 113 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~--~-------g~------------------G~S~~~~~~ 113 (284)
...+|++|++=|+.|++.. .+++..++.+++..-+.+++ . .+ |-..|-...
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~Ts 94 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTS 94 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhh
Confidence 4567899999999988873 56666677666543333332 1 11 111110000
Q ss_pred CCcccHhHHHHHHHHHHhc---CC------CCcEEEEEEehhHHHHHH-HhccCCCccEEEEcCC
Q 023299 114 LGWHEKDDLKVVVSYLRGN---KQ------TSRIGLWGRSMGAVTSLL-YGAEDPSIAGMVLDSA 168 (284)
Q Consensus 114 ~~~~~~~d~~~~i~~~~~~---~~------~~~i~l~G~S~Gg~~a~~-~a~~~p~v~~lil~~~ 168 (284)
... ....+.+++.++.+. .. ..+|=++-+|..|.|... +|..+|-|-.-|+..+
T Consensus 95 LNL-F~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~ 158 (366)
T KOG1532|consen 95 LNL-FATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYVVDTP 158 (366)
T ss_pred HHH-HHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEEecCC
Confidence 000 033344444444333 21 157888999988886665 4556787666666654
No 306
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=31.18 E-value=1.6e+02 Score=23.00 Aligned_cols=54 Identities=13% Similarity=0.040 Sum_probs=38.3
Q ss_pred HHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehh
Q 023299 88 ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (284)
Q Consensus 88 ~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~G 146 (284)
.|.+.|+..+.+|.=+.= .. +.... -..++.++++.+++..+.+++.|+-.|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL-~~--~~~~~--i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTL-TP--PYEDE--IPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCC-CC--CCcCc--CCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 377889999999985321 11 11111 15778889999998877679999999986
No 307
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=30.56 E-value=71 Score=24.78 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=22.7
Q ss_pred EEECCCCCChhh--HHHHHHHHhhCCcEEEEEcCC
Q 023299 70 VYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 70 v~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 102 (284)
.+.++-||.+.+ -..++..|+++|+.|+.+|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 445555555553 456788899999999999983
No 308
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=30.04 E-value=1.4e+02 Score=22.91 Aligned_cols=84 Identities=11% Similarity=0.120 Sum_probs=47.5
Q ss_pred EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCC-----CChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCC
Q 023299 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS-----GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (284)
Q Consensus 41 ~~~~~~g~~l~~~~~~P~~~~~~~~~~~vv~~HG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~ 115 (284)
...+.+|..+...-| ...+|+++.-.. .....+..+.+.+.++|+.|+.+=.--++..+
T Consensus 9 ~~~~~~G~~~~l~~~---------~GkVlLIVNtASkCGfTpQYegLe~Ly~ky~~~Gf~VLgFPcNQF~~QE------- 72 (162)
T COG0386 9 SVKDIDGEPVSLSDY---------KGKVLLIVNTASKCGFTPQYEGLEALYKKYKDKGFEVLGFPCNQFGGQE------- 72 (162)
T ss_pred eeeccCCCCccHHHh---------CCcEEEEEEcccccCCcHhHHHHHHHHHHHhhCCcEEEeccccccccCC-------
Confidence 444556655543221 345677776444 34445677778888899999966544333222
Q ss_pred cccHhHHHHHHHHHHhcCCC-----CcEEEEEE
Q 023299 116 WHEKDDLKVVVSYLRGNKQT-----SRIGLWGR 143 (284)
Q Consensus 116 ~~~~~d~~~~i~~~~~~~~~-----~~i~l~G~ 143 (284)
..+-.++.++...++++ ++|-+-|-
T Consensus 73 ---Pg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~ 102 (162)
T COG0386 73 ---PGSDEEIAKFCQLNYGVTFPMFSKIDVNGK 102 (162)
T ss_pred ---CCCHHHHHHHHHhccCceeeeeeEEeecCC
Confidence 23344455566666654 56666553
No 309
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.90 E-value=66 Score=30.25 Aligned_cols=27 Identities=11% Similarity=-0.209 Sum_probs=22.3
Q ss_pred hcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 131 GNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 131 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
+..++.+-.++|||+|=+.|+..|.-.
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 456788889999999999998887654
No 310
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.11 E-value=94 Score=25.95 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCC-cEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTS-RIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.+. +.. -=.+.|.|.|+.++..+++...
T Consensus 14 ~Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 14 AGVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 4566666665 333 3379999999999999887654
No 311
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=28.58 E-value=93 Score=26.93 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=21.9
Q ss_pred CCCccEEEEECCCCCChhhH--HHHHHHHhhCC
Q 023299 63 DTPLPCVVYCHGNSGCRADA--NEAAVILLPSN 93 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~~~~~--~~~~~~l~~~g 93 (284)
.+.+|.|+=+||+.|++..+ .-+++.+...|
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 45789999999999998865 23344444444
No 312
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=28.30 E-value=1e+02 Score=28.60 Aligned_cols=73 Identities=14% Similarity=0.155 Sum_probs=48.3
Q ss_pred CCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEE
Q 023299 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGL 140 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l 140 (284)
.+.|++|++.|+.+++. ....+...+..+|+.|.++..|.--+. ... +-++-........|+|
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~eE~--------------~~~flwRfw~~lP~~G~I~I 102 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSDEER--------------ERPPMWRFWRRLPPKGKIGI 102 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCHHHh--------------cCcHHHHHHHhCCCCCeEEE
Confidence 35789999999986665 578888999999999999988742111 111 2223333333478888
Q ss_pred EEEehhHHHH
Q 023299 141 WGRSMGAVTS 150 (284)
Q Consensus 141 ~G~S~Gg~~a 150 (284)
+=.|.=+-+.
T Consensus 103 FdRSWY~~vl 112 (493)
T TIGR03708 103 FFGSWYTRPL 112 (493)
T ss_pred EcCcccchhh
Confidence 8888554443
No 313
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=28.20 E-value=3.3e+02 Score=22.16 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=37.0
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCC------CC--CcccCC--cccHhHHHHHHHHHHhcCC
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS------DG--DYVSLG--WHEKDDLKVVVSYLRGNKQ 134 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S------~~--~~~~~~--~~~~~d~~~~i~~~~~~~~ 134 (284)
+..+-|.+.... ..+++.|++.|++|+..|+.--+.. .+ ....++ -...+|+...++.+.+.++
T Consensus 16 ~~~vtGg~sGIG--rAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 16 VAAVTGGSSGIG--RAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred eeEEecCCchHH--HHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 444444443222 3577889999999999998732110 01 111111 1237788888888877665
No 314
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=27.45 E-value=2e+02 Score=19.38 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=45.0
Q ss_pred CccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEE
Q 023299 65 PLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G 142 (284)
..++|||..|..+... ........|.+.|.....+|.... .++.+.+...........|++-|
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~---------------~~~~~~l~~~~g~~tvP~vfi~g 71 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILED---------------EEVRQGLKEYSNWPTFPQLYVNG 71 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCEEEECC
Confidence 4689999998764433 334455567777766666665310 22333333333332347788888
Q ss_pred EehhHHHHHHHhc
Q 023299 143 RSMGAVTSLLYGA 155 (284)
Q Consensus 143 ~S~Gg~~a~~~a~ 155 (284)
.-+||.--+..+.
T Consensus 72 ~~iGG~~~l~~l~ 84 (90)
T cd03028 72 ELVGGCDIVKEMH 84 (90)
T ss_pred EEEeCHHHHHHHH
Confidence 8899987665543
No 315
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.44 E-value=73 Score=23.11 Aligned_cols=31 Identities=13% Similarity=0.090 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHH
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSL 151 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~ 151 (284)
++...+++....++++.|+++||+=-|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 5667777777777999999999987776655
No 316
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=27.38 E-value=1.4e+02 Score=26.35 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=28.8
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCC
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD 108 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~ 108 (284)
|||+|.+.- ..+..+++.|+++|+.|..+-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788887653 23667999999999999998887765543
No 317
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=27.31 E-value=2.7e+02 Score=22.23 Aligned_cols=39 Identities=8% Similarity=-0.135 Sum_probs=26.8
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEEeh----hHHHHHHHhccCC
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGRSM----GAVTSLLYGAEDP 158 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~S~----Gg~~a~~~a~~~p 158 (284)
.+....++..+.++.+ ..++|+|+|. |..++..+|++..
T Consensus 93 ~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 93 TLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred hHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 3445555555544434 5789999998 8889998888764
No 318
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=27.30 E-value=1.8e+02 Score=20.33 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=21.0
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTL 99 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~ 99 (284)
+..++||++.+.... .....+..|...|+.|..+
T Consensus 63 ~~~~vvvyc~~g~~~--~s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPGCN--GATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCCCc--hHHHHHHHHHHcCCeEEEe
Confidence 357889998765321 2234556677789986544
No 319
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.70 E-value=73 Score=25.11 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
+..+.++|....++++.|+++|||-=|++...+.
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 3667888888888999999999998777665443
No 320
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.64 E-value=4e+02 Score=22.57 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEE-EEEehhHHHHHHHhccCCC--ccEEEEc
Q 023299 93 NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL-WGRSMGAVTSLLYGAEDPS--IAGMVLD 166 (284)
Q Consensus 93 g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l-~G~S~Gg~~a~~~a~~~p~--v~~lil~ 166 (284)
++.++.+|-+|..... ...+.++.+.+... ....++| +.-++++.-+...+..+.. +.++|+-
T Consensus 154 ~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYRA----------SETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcCC----------HHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 6788888887753211 22233333333222 2334444 4446777777777766654 8888863
No 321
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=26.47 E-value=99 Score=27.94 Aligned_cols=36 Identities=19% Similarity=0.045 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
-..+++.+.++ +...=++.|-|.|+.+|..++...+
T Consensus 82 h~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 82 HFGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred HHHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCH
Confidence 34667777666 4544469999999999999988543
No 322
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=26.43 E-value=2.2e+02 Score=23.91 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=32.6
Q ss_pred CCccEEEEECCCC--CChhhHHHHHHHHhhCCcEEEEEcCC
Q 023299 64 TPLPCVVYCHGNS--GCRADANEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 64 ~~~~~vv~~HG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~ 102 (284)
++..+|+++.|.. |-+.....+.+.|..+|++|+++-.|
T Consensus 71 ~~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~aP 111 (270)
T COG2326 71 TGQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPAP 111 (270)
T ss_pred cCCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCCC
Confidence 4578999999986 44457889999999999999998876
No 323
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=26.38 E-value=1.1e+02 Score=20.96 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=23.5
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCC
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 102 (284)
+.+++||+|..+..+.. .+..|.+.||..+ .++.
T Consensus 60 ~~~~ivv~C~~G~rS~~----aa~~L~~~G~~~~-~~l~ 93 (110)
T COG0607 60 DDDPIVVYCASGVRSAA----AAAALKLAGFTNV-YNLD 93 (110)
T ss_pred CCCeEEEEeCCCCChHH----HHHHHHHcCCccc-cccC
Confidence 46788998988776543 5556777888777 3443
No 324
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=26.17 E-value=2.4e+02 Score=23.57 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=22.1
Q ss_pred EEEECCCCCChhh--HHHHHHHHhhCCcEEEEEcC
Q 023299 69 VVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDF 101 (284)
Q Consensus 69 vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 101 (284)
=++++|..|++.+ ...+...+++.|.+++-++-
T Consensus 54 nvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k 88 (249)
T PF05673_consen 54 NVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK 88 (249)
T ss_pred ceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH
Confidence 3555777666553 45667777788888776654
No 325
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=25.80 E-value=1.1e+02 Score=27.48 Aligned_cols=35 Identities=23% Similarity=0.107 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ +..+=++.|-|.|+.+|..+|..-+
T Consensus 99 ~Gv~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 99 LGVVKALWLR-GLLPRIITGTATGALIAALVGVHTD 133 (391)
T ss_pred HHHHHHHHHc-CCCCceEEEecHHHHHHHHHHcCCH
Confidence 3566666665 5544469999999999999988533
No 326
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=25.43 E-value=1.3e+02 Score=24.81 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=24.9
Q ss_pred HHHHHHHHhcCCCC--c--EEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQTS--R--IGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~~~--~--i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++ ++. + -.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 15 VGVASALREH-APRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 3566666665 222 1 379999999999999987654
No 327
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=25.40 E-value=3.6e+02 Score=21.68 Aligned_cols=77 Identities=14% Similarity=0.058 Sum_probs=36.2
Q ss_pred cEEEEECCCCCChhhHHHHHHH-HhhCCcEEEEEcCCCC-CCCC----CCc----ccCCcccHhHHHHHHHHHHhcCCCC
Q 023299 67 PCVVYCHGNSGCRADANEAAVI-LLPSNITLFTLDFSGS-GLSD----GDY----VSLGWHEKDDLKVVVSYLRGNKQTS 136 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~~~~~~~~-l~~~g~~v~~~d~~g~-G~S~----~~~----~~~~~~~~~d~~~~i~~~~~~~~~~ 136 (284)
.++||+.|.|++.+.....++. ....-...+..|-+.- |... +-+ ....+.+.++.+..+....+..+.+
T Consensus 2 ki~VlaSG~GSNlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~k~~~~r~~~d~~l~~~l~~~~~d 81 (200)
T COG0299 2 KIAVLASGNGSNLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVLDRKEFPSREAFDRALVEALDEYGPD 81 (200)
T ss_pred eEEEEEeCCcccHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEeccccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999998887754333320 0011133333444211 1110 000 0011112445555665555555677
Q ss_pred cEEEEEE
Q 023299 137 RIGLWGR 143 (284)
Q Consensus 137 ~i~l~G~ 143 (284)
=++|.|+
T Consensus 82 lvvLAGy 88 (200)
T COG0299 82 LVVLAGY 88 (200)
T ss_pred EEEEcch
Confidence 7777775
No 328
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=25.39 E-value=1.5e+02 Score=21.50 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=19.0
Q ss_pred CCccEEEEEC-CCCCChhhHHHHHHHHhhCCcEEEEEc
Q 023299 64 TPLPCVVYCH-GNSGCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 64 ~~~~~vv~~H-G~~~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
+..++||++. |+..+. ..+..|...||.|..++
T Consensus 85 ~~~~vvvyC~~~G~rs~----~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRSQ----SLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccHH----HHHHHHHHcCCceeEeC
Confidence 4578999996 433322 22244555699765443
No 329
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.37 E-value=1.2e+02 Score=26.44 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhcc
Q 023299 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (284)
Q Consensus 123 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 156 (284)
..+++.+.++ +...-++.|-|.|+.+|..++..
T Consensus 84 ~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 84 VGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 3556666665 55444699999999999988874
No 330
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=25.37 E-value=70 Score=23.30 Aligned_cols=35 Identities=11% Similarity=-0.077 Sum_probs=27.0
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCC
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 102 (284)
++|...|..|+-..+..+++.|.++|+.|...--+
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 35667777788888999999999999999855443
No 331
>PLN03006 carbonate dehydratase
Probab=25.34 E-value=73 Score=27.41 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHH
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 153 (284)
+.++|+|....++++.|+++|||-=|++...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 66788999888899999999999766666544
No 332
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=25.12 E-value=3.1e+02 Score=21.11 Aligned_cols=80 Identities=10% Similarity=0.132 Sum_probs=41.6
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCC-CCCcc-cCCc-ccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS-DGDYV-SLGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S-~~~~~-~~~~-~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
-|++.|.|.+...-..+...|...|..+...+-...... +++.. ..+. ....++.++++.++++ +. +++.+=.+-
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~Dv~I~iS~sG~t~~~i~~~~~ak~~-g~-~ii~IT~~~ 109 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETTTPSIKKGDLLIAISGSGETESLVTVAKKAKEI-GA-TVAAITTNP 109 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCCcccCCCCCCCEEEEEeCCCCcHHHHHHHHHHHHC-CC-eEEEEECCC
Confidence 467777776665555666677777888877643321111 11100 0011 1257788888888765 43 333333333
Q ss_pred hHHHH
Q 023299 146 GAVTS 150 (284)
Q Consensus 146 Gg~~a 150 (284)
++.++
T Consensus 110 ~s~la 114 (179)
T TIGR03127 110 ESTLG 114 (179)
T ss_pred CCchH
Confidence 33333
No 333
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=25.10 E-value=91 Score=21.37 Aligned_cols=32 Identities=22% Similarity=0.542 Sum_probs=19.1
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcE-EEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTL 99 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~-v~~~ 99 (284)
+.+++||+|.++..+. ..+..|.+.||. |..+
T Consensus 60 ~~~~ivvyC~~G~rs~----~a~~~L~~~G~~~v~~l 92 (101)
T cd01518 60 KGKKVLMYCTGGIRCE----KASAYLKERGFKNVYQL 92 (101)
T ss_pred CCCEEEEECCCchhHH----HHHHHHHHhCCcceeee
Confidence 4567888887643332 234456677985 5443
No 334
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=24.96 E-value=1.2e+02 Score=26.07 Aligned_cols=35 Identities=26% Similarity=0.208 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccC
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
-..+++.+.++ +...-++.|.|.|+.+|..++...
T Consensus 84 h~Gvl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 84 HLGVVKALWEQ-DLLPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHHHHHc-CCCCCEEEEEcHHHHHHHHHHcCC
Confidence 33455666554 443446999999999999988753
No 335
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.91 E-value=1.1e+02 Score=25.35 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCCC---CcE-EEEEEehhHHHHHHHhc
Q 023299 123 KVVVSYLRGNKQT---SRI-GLWGRSMGAVTSLLYGA 155 (284)
Q Consensus 123 ~~~i~~~~~~~~~---~~i-~l~G~S~Gg~~a~~~a~ 155 (284)
..+++.+.++ +. +++ .+.|-|+|+.++..++.
T Consensus 15 iGVl~~L~e~-g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 15 LGAAKALLRH-GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHc-CchhhccCCEEEEECHHHHHHHHHhc
Confidence 4566677665 32 233 79999999999999984
No 336
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=24.67 E-value=3.2e+02 Score=22.53 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=25.5
Q ss_pred ccEEEEECCCCC--ChhhH-HHHHHHHhhCCcEEEEEcCC
Q 023299 66 LPCVVYCHGNSG--CRADA-NEAAVILLPSNITLFTLDFS 102 (284)
Q Consensus 66 ~~~vv~~HG~~~--~~~~~-~~~~~~l~~~g~~v~~~d~~ 102 (284)
.+.|+|+.=.+. ....| ..+.+.|.+.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 467888887763 34443 34555778889998888765
No 337
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.45 E-value=1.4e+02 Score=24.95 Aligned_cols=37 Identities=22% Similarity=0.104 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCCC---CcEEEEEEehhHHHHHHHhccCC
Q 023299 122 LKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 122 ~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
-..+++.+.++... ..-.+.|-|.|+.++..++...+
T Consensus 19 h~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 19 HVGVASCLLEHAPFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 34566777665211 13468899999999999987654
No 338
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=24.17 E-value=3.2e+02 Score=20.68 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=37.9
Q ss_pred HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCCc
Q 023299 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPSI 160 (284)
Q Consensus 83 ~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~v 160 (284)
..+...|.++||.|+ |+ |..+.++. . .-|... +.+.+.+. ..++ |.+.|.-+|-.+ +|.+.|.|
T Consensus 14 ~~l~~~L~~~g~eV~--D~---G~~~~~~~--d---Ypd~a~~va~~V~~g-~~~~GIliCGtGiG~si---aANK~~GI 79 (144)
T TIGR00689 14 SEIIEHLKQKGHEVI--DC---GTLYDERV--D---YPDYAKLVADKVVAG-EVSLGILICGTGIGMSI---AANKFKGI 79 (144)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCCCCCC--C---hHHHHHHHHHHHHcC-CCceEEEEcCCcHHHHH---HHhcCCCe
Confidence 345668888999886 54 21111111 1 233333 33333332 3333 444454455443 45788888
Q ss_pred cEEEEcCCc
Q 023299 161 AGMVLDSAF 169 (284)
Q Consensus 161 ~~lil~~~~ 169 (284)
++.+..++.
T Consensus 80 raa~~~d~~ 88 (144)
T TIGR00689 80 RAALCVDEY 88 (144)
T ss_pred EEEEECCHH
Confidence 887776544
No 339
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=24.08 E-value=1.6e+02 Score=24.60 Aligned_cols=34 Identities=21% Similarity=0.083 Sum_probs=28.0
Q ss_pred cEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEc
Q 023299 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 67 ~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
..|+++-|-|.++.+-.-.++.|..+|+.|..+-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 3577777888888887788999999999998776
No 340
>PRK06398 aldose dehydrogenase; Validated
Probab=23.87 E-value=4.1e+02 Score=21.74 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=28.5
Q ss_pred HHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCC
Q 023299 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ 134 (284)
Q Consensus 84 ~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~ 134 (284)
.++..|++.|+.|+..+...-....-........+.+++.++++.+.++.+
T Consensus 21 ~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 21 AVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred HHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467778889999998875321110000111122235677777877766543
No 341
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=23.67 E-value=2.5e+02 Score=25.15 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=27.4
Q ss_pred cEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcC-CCCCCC
Q 023299 67 PCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDF-SGSGLS 107 (284)
Q Consensus 67 ~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~-~g~G~S 107 (284)
.+|.+...=||.+. .-..++..|+.+|+.|+.+|+ -.+|..
T Consensus 107 ~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 107 VVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 34444444444444 456778889999999999996 666543
No 342
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=23.50 E-value=2e+02 Score=21.61 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHH
Q 023299 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (284)
Q Consensus 120 ~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 153 (284)
.++.+.++|.....+++.|+++|||==|++...+
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 6788899999999899999999999777766443
No 343
>TIGR03282 methan_mark_13 putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others.
Probab=23.01 E-value=1.9e+02 Score=25.48 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=43.3
Q ss_pred ccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
...|+++||..||..... ..+...+..+.+-++ ++. ..-+...+.+.++++.+.+.++.+-|++++-+.
T Consensus 18 ~~aVpIlHGPsGCa~~~~---r~l~~~~~~v~sT~L-----~E~---DvVFGGeeKL~eaI~ea~e~y~P~lI~VvTTCv 86 (352)
T TIGR03282 18 EVDVIILHGPSGCCFRTA---RLLEEDGVRVFTTGM-----DEN---DFVFGASEKLVKVIRYAEEKFKPELIGVVGTCA 86 (352)
T ss_pred CCCEEEEECchhhhhhhh---hhccCCCCceeccCC-----CCC---ceEeCcHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 457899999998885322 112222333333222 111 111122577888888888887777788887776
Q ss_pred hHHHH
Q 023299 146 GAVTS 150 (284)
Q Consensus 146 Gg~~a 150 (284)
.+.+.
T Consensus 87 seIIG 91 (352)
T TIGR03282 87 SMIIG 91 (352)
T ss_pred hhhcc
Confidence 66654
No 344
>PRK11460 putative hydrolase; Provisional
Probab=23.00 E-value=4.1e+02 Score=21.54 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=34.5
Q ss_pred CccEEEEECCCCCChh---hHHHHHHHHhhCCcEEEEEcCC--CCCCCCCCcccCCcccHhHHHHHHHHHHhcC
Q 023299 65 PLPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFS--GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK 133 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~--g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~ 133 (284)
..+.|+++||.....- ........|.+.|..+-...++ ||+-+ .+.+..+.+|+.+..
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~-----------~~~~~~~~~~l~~~l 209 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID-----------PRLMQFALDRLRYTV 209 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-----------HHHHHHHHHHHHHHc
Confidence 4677999999886544 3345556677777666555555 44432 345555556665543
No 345
>COG0400 Predicted esterase [General function prediction only]
Probab=22.84 E-value=4.1e+02 Score=21.44 Aligned_cols=58 Identities=21% Similarity=0.187 Sum_probs=40.8
Q ss_pred CCCccEEEEECCCCCC---hhhHHHHHHHHhhCCcEEEEEcCC-CCCCCCCCcccCCcccHhHHHHHHHHHHh
Q 023299 63 DTPLPCVVYCHGNSGC---RADANEAAVILLPSNITLFTLDFS-GSGLSDGDYVSLGWHEKDDLKVVVSYLRG 131 (284)
Q Consensus 63 ~~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~-g~G~S~~~~~~~~~~~~~d~~~~i~~~~~ 131 (284)
......|++.||.... ......+.+.|.+.|..|...++. ||.-. .+++..+.+|+.+
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~-----------~e~~~~~~~wl~~ 204 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP-----------PEELEAARSWLAN 204 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC-----------HHHHHHHHHHHHh
Confidence 3467899999998754 335567777888899999988885 43211 4666666667654
No 346
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=22.75 E-value=2.9e+02 Score=21.99 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=25.4
Q ss_pred ccEEEEECCCCCChh---hHHHHHHHHhhCCcEEEEEcCCCCC
Q 023299 66 LPCVVYCHGNSGCRA---DANEAAVILLPSNITLFTLDFSGSG 105 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~G 105 (284)
+..|+++||.....- ......+.|.+.|.+|-.-.++|-|
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~g 197 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGG 197 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-S
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCC
Confidence 568999999886543 3455666787778777776766544
No 347
>PRK05481 lipoyl synthase; Provisional
Probab=22.67 E-value=2.3e+02 Score=24.17 Aligned_cols=56 Identities=13% Similarity=-0.031 Sum_probs=39.6
Q ss_pred ChhhHHHHHHHHhhC--CcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEeh
Q 023299 78 CRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (284)
Q Consensus 78 ~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~ 145 (284)
+.+.|......+.+. |+.+-+--.-|+|++ .+|..+.++.+++. +.+.++++-+|-
T Consensus 178 t~e~~le~i~~ar~~~pgi~~~t~~IvGfGET-----------~ed~~~tl~~lrel-~~d~v~if~Ys~ 235 (289)
T PRK05481 178 DYERSLELLKRAKELHPGIPTKSGLMVGLGET-----------DEEVLEVMDDLRAA-GVDILTIGQYLQ 235 (289)
T ss_pred CHHHHHHHHHHHHHhCCCCeEeeeeEEECCCC-----------HHHHHHHHHHHHhc-CCCEEEEEccCC
Confidence 444566666666666 777665555566654 47788888888776 779999998888
No 348
>PRK12828 short chain dehydrogenase; Provisional
Probab=22.54 E-value=3.4e+02 Score=21.51 Aligned_cols=31 Identities=19% Similarity=0.132 Sum_probs=21.7
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcC
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDF 101 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 101 (284)
.+++.|..+... ..+++.|+++|+.|+..+.
T Consensus 9 ~vlItGatg~iG--~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG--RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh--HHHHHHHHHCCCeEEEEeC
Confidence 466677655443 3567778888999998875
No 349
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=22.46 E-value=1.5e+02 Score=24.61 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCC-CCcEEEEEEehhHHHHHHHhccCC
Q 023299 123 KVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDP 158 (284)
Q Consensus 123 ~~~i~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p 158 (284)
..+++.+.++.. ...-.+.|-|+|+.++..++...+
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 456666666532 112239999999999999987643
No 350
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.10 E-value=1.4e+02 Score=22.70 Aligned_cols=32 Identities=25% Similarity=0.007 Sum_probs=22.1
Q ss_pred HHHHHHHHhcCCC-CcEEEEEEehhHHHHHHHh
Q 023299 123 KVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 123 ~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a 154 (284)
..+++.+.++... .--.+.|.|.|+.++..++
T Consensus 14 ~gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3455566554221 3447889999999999888
No 351
>PF13728 TraF: F plasmid transfer operon protein
Probab=22.00 E-value=2.3e+02 Score=22.99 Aligned_cols=43 Identities=2% Similarity=0.104 Sum_probs=35.2
Q ss_pred CccEEEEECCCCCChhhHHHHHHHHhhC-CcEEEEEcCCCCCCC
Q 023299 65 PLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLS 107 (284)
Q Consensus 65 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~S 107 (284)
....++|..|.+.-+....++++.|+++ |+.|+.++.=|.+..
T Consensus 121 ~~gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~ 164 (215)
T PF13728_consen 121 KYGLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIP 164 (215)
T ss_pred CeEEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCc
Confidence 4568888999888888888888888765 999999998776654
No 352
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=21.99 E-value=2.3e+02 Score=27.58 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=27.3
Q ss_pred CCccEEEEECCCCC----------ChhhHHHHHHHHhhCCcEEEEEc
Q 023299 64 TPLPCVVYCHGNSG----------CRADANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 64 ~~~~~vv~~HG~~~----------~~~~~~~~~~~l~~~g~~v~~~d 100 (284)
+..-+||+.|.... +.+.+...++.|.++||.++.++
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~ 92 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVD 92 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHH
Confidence 34567777777643 23468888899999999999876
No 353
>PLN00416 carbonate dehydratase
Probab=21.99 E-value=98 Score=26.02 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
.+.+.|+|....++++.|+++|||-=|++...+.
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 4667888888888999999999997666655443
No 354
>COG3933 Transcriptional antiterminator [Transcription]
Probab=21.84 E-value=6.3e+02 Score=23.24 Aligned_cols=77 Identities=22% Similarity=0.243 Sum_probs=49.1
Q ss_pred CCccEEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEEEE
Q 023299 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWG 142 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l~G 142 (284)
+.-.++|+.||... .+++..++..|...+. +.++|+|- +.+ ..|+.+ +.+++.+. ...+-.++=
T Consensus 107 ~~v~vIiiAHG~sT-ASSmaevanrLL~~~~-~~aiDMPL---------dvs---p~~vle~l~e~~k~~-~~~~GlllL 171 (470)
T COG3933 107 PRVKVIIIAHGYST-ASSMAEVANRLLGEEI-FIAIDMPL---------DVS---PSDVLEKLKEYLKER-DYRSGLLLL 171 (470)
T ss_pred CceeEEEEecCcch-HHHHHHHHHHHhhccc-eeeecCCC---------cCC---HHHHHHHHHHHHHhc-CccCceEEE
Confidence 45678999999764 4566788888887654 78889872 222 344444 44555444 445544555
Q ss_pred EehhHHHHHHHhc
Q 023299 143 RSMGAVTSLLYGA 155 (284)
Q Consensus 143 ~S~Gg~~a~~~a~ 155 (284)
..||...++.=..
T Consensus 172 VDMGSL~~f~~~i 184 (470)
T COG3933 172 VDMGSLTSFGSII 184 (470)
T ss_pred EecchHHHHHHHH
Confidence 6899988765443
No 355
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.82 E-value=5e+02 Score=23.79 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=44.4
Q ss_pred HHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC---ccEEE
Q 023299 88 ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMV 164 (284)
Q Consensus 88 ~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~li 164 (284)
.+.+.+|.|+.+|=.|.= .. -+++.+-+..+.+...++.+.++=-||=|.-|...|..+.+ +.++|
T Consensus 177 ~ak~~~~DvvIvDTAGRl------~i-----de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL------HI-----DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHcCCCEEEEeCCCcc------cc-----cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 344456667777654421 10 13344444445554466888999999999999999887754 88998
Q ss_pred Ec
Q 023299 165 LD 166 (284)
Q Consensus 165 l~ 166 (284)
+-
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 85
No 356
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.78 E-value=1e+02 Score=24.56 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
.+.+.++|....++++.|+++|||-=|++...+.
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 3667888888888999999999997666665443
No 357
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.69 E-value=2.8e+02 Score=21.29 Aligned_cols=46 Identities=26% Similarity=0.279 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCCC-ccEEEEcCCc
Q 023299 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (284)
Q Consensus 122 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~lil~~~~ 169 (284)
+.+.++.++.+ -.+|+++|-|..|.+.+.++...++ +.+++=.+|.
T Consensus 57 l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 57 LREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 33344434333 3789999999999999999877666 8888766653
No 358
>COG0218 Predicted GTPase [General function prediction only]
Probab=21.69 E-value=1.3e+02 Score=24.13 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=12.7
Q ss_pred EEEEcCCCCCCCCCCc
Q 023299 96 LFTLDFSGSGLSDGDY 111 (284)
Q Consensus 96 v~~~d~~g~G~S~~~~ 111 (284)
...+|+||+|......
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 5678999999887643
No 359
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=21.66 E-value=5.6e+02 Score=22.71 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=22.4
Q ss_pred CCCcEEEEEEe-hhHHHHHHHhccCCCccEEEEcCC
Q 023299 134 QTSRIGLWGRS-MGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 134 ~~~~i~l~G~S-~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
...+|.|+|-. .|+.++..++... +..++++..
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~G--vg~i~lvD~ 167 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAG--VGTLGIVDH 167 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcC--CCeEEEEeC
Confidence 34789999886 6777777665433 666666654
No 360
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.66 E-value=2.9e+02 Score=19.33 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=32.4
Q ss_pred cEEEEECCCCCCh-hhHHHHHHHHhhCC-cEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEE
Q 023299 67 PCVVYCHGNSGCR-ADANEAAVILLPSN-ITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 67 ~~vv~~HG~~~~~-~~~~~~~~~l~~~g-~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
.+|++-||..... ..+..+...+.+++ ..|..--+ + + .-++.++++.+.++ +.++|.++
T Consensus 2 ~illvgHGSr~~~~~~~~~l~~~l~~~~~~~v~~~~l----E--~---------~P~i~~~l~~l~~~-G~~~i~lv 62 (103)
T cd03413 2 AVVFMGHGTDHPSNAVYAALEYVLREEDPANVFVGTV----E--G---------YPGLDDVLAKLKKA-GIKKVTLM 62 (103)
T ss_pred eEEEEECCCCchhhhHHHHHHHHHHhcCCCcEEEEEE----c--C---------CCCHHHHHHHHHHc-CCCEEEEE
Confidence 4678889987643 35666666665543 22321111 1 1 12355666666665 67777766
No 361
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=21.62 E-value=80 Score=22.73 Aligned_cols=31 Identities=26% Similarity=0.234 Sum_probs=23.8
Q ss_pred cEEEEE-EehhHHHHHHHhccCCCccEEEEcC
Q 023299 137 RIGLWG-RSMGAVTSLLYGAEDPSIAGMVLDS 167 (284)
Q Consensus 137 ~i~l~G-~S~Gg~~a~~~a~~~p~v~~lil~~ 167 (284)
||.|+| ..+.|...+.+...+|.+.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeee
Confidence 578999 7888888888888899866555443
No 362
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=21.56 E-value=1.2e+02 Score=28.22 Aligned_cols=72 Identities=11% Similarity=0.115 Sum_probs=48.7
Q ss_pred CCccEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHH-HHHHHHhcCCCCcEEE
Q 023299 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGL 140 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~-~i~~~~~~~~~~~i~l 140 (284)
...|++|++.|+.+.+. ....+...+..+||.|..+-.|.- .+.... +-++-........|++
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~Pt~--------------~E~~~~~lwRf~~~lP~~G~i~i 361 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAPTD--------------EEKAQHYLWRFWRHIPRRGRITI 361 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCcCH--------------HHHcCcHHHHHHHhCCCCCeEEE
Confidence 45799999999975544 688889999999999998877621 111111 2234444444488999
Q ss_pred EEEehhHHH
Q 023299 141 WGRSMGAVT 149 (284)
Q Consensus 141 ~G~S~Gg~~ 149 (284)
+=.|.=+-+
T Consensus 362 FdRSwY~~v 370 (493)
T TIGR03708 362 FDRSWYGRV 370 (493)
T ss_pred EcCCccCCc
Confidence 988865444
No 363
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=21.43 E-value=4.5e+02 Score=21.35 Aligned_cols=74 Identities=11% Similarity=0.035 Sum_probs=41.0
Q ss_pred EEEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEe
Q 023299 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (284)
Q Consensus 68 ~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S 144 (284)
.+|++................+.+.|..|+.+|....+.... .............+.+++.++ +..++.+++..
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~--~~V~~d~~~~~~~~~~~l~~~-g~~~i~~i~~~ 131 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKV--PHVSTDDALAMRLAVRHLVAL-GHRRIGFASGP 131 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCC--CEEEECcHHHHHHHHHHHHHC-CCceEEEEeCC
Confidence 344444333322233344556677899999998643221111 111222356667777888776 66888888654
No 364
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=21.39 E-value=2.8e+02 Score=23.96 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=26.4
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCC
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS 104 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 104 (284)
+-++-|..|....+ +++.|.++||.|..+.-|..
T Consensus 4 ~ALITGITGQDGsY--La~lLLekGY~VhGi~Rrss 37 (345)
T COG1089 4 VALITGITGQDGSY--LAELLLEKGYEVHGIKRRSS 37 (345)
T ss_pred eEEEecccCCchHH--HHHHHHhcCcEEEEEeeccc
Confidence 55677777766655 77888999999999988844
No 365
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=21.22 E-value=1.7e+02 Score=27.79 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=32.7
Q ss_pred HhHHHHHHHHHHhcCCCCcEEEEEE------ehhHHHHHHHhccCCCccEEEEcCC
Q 023299 119 KDDLKVVVSYLRGNKQTSRIGLWGR------SMGAVTSLLYGAEDPSIAGMVLDSA 168 (284)
Q Consensus 119 ~~d~~~~i~~~~~~~~~~~i~l~G~------S~Gg~~a~~~a~~~p~v~~lil~~~ 168 (284)
++.+-.++..+.+. .++++++|| |+|+++++...+..-.-.+-++..|
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~~a~~v~dp 376 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNKEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhcccccEEEECc
Confidence 55666666666554 599999999 6899999877665443344444444
No 366
>PRK00889 adenylylsulfate kinase; Provisional
Probab=21.20 E-value=2.3e+02 Score=21.62 Aligned_cols=36 Identities=25% Similarity=0.165 Sum_probs=24.8
Q ss_pred ccEEEEECCCCCChhh--HHHHHHHHhhCCcEEEEEcC
Q 023299 66 LPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDF 101 (284)
Q Consensus 66 ~~~vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 101 (284)
++.+|.+.|.+|++.+ ...++..+...|..+..+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3558888899888774 34455666667777776654
No 367
>PLN02564 6-phosphofructokinase
Probab=21.16 E-value=6.8e+02 Score=23.33 Aligned_cols=96 Identities=14% Similarity=0.173 Sum_probs=51.5
Q ss_pred EEEECCCCCChhhHHHHHHHHhhCCcEEEEEcCCCCCCCC--CCcccCCccc-HhHHHHHHHHHHhcCCC--CcEEEEEE
Q 023299 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD--GDYVSLGWHE-KDDLKVVVSYLRGNKQT--SRIGLWGR 143 (284)
Q Consensus 69 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~--~~~~~~~~~~-~~d~~~~i~~~~~~~~~--~~i~l~G~ 143 (284)
.|++=|+.++...-..+.+.+.++|+.+-.+-.|..=..+ +.....++.+ ++.+.++++.+...... .+++++ -
T Consensus 179 ~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTAv~~~~~aI~~i~~tA~S~~~rv~iV-E 257 (484)
T PLN02564 179 QVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESVENGIGLV-K 257 (484)
T ss_pred EEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-E
Confidence 4555565665555556666677778775555555543332 2233445544 55566666666544222 255443 4
Q ss_pred ehh---HHHHHHHhccCCCccEEEE
Q 023299 144 SMG---AVTSLLYGAEDPSIAGMVL 165 (284)
Q Consensus 144 S~G---g~~a~~~a~~~p~v~~lil 165 (284)
=|| |++|+..+........+++
T Consensus 258 vMGR~aG~LAl~aaLA~~gad~iLI 282 (484)
T PLN02564 258 LMGRYSGFIAMYATLASRDVDCCLI 282 (484)
T ss_pred ECCCCHHHHHHHHHHhhCCCCEEEe
Confidence 455 7788776654423443333
No 368
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=21.07 E-value=86 Score=23.89 Aligned_cols=21 Identities=24% Similarity=0.129 Sum_probs=16.3
Q ss_pred cEEEEEEehhHHHHHHHhccC
Q 023299 137 RIGLWGRSMGAVTSLLYGAED 157 (284)
Q Consensus 137 ~i~l~G~S~Gg~~a~~~a~~~ 157 (284)
--.+.|-|.||.+++.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 347999999999998777663
No 369
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=21.07 E-value=1.8e+02 Score=23.59 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=27.3
Q ss_pred EEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCC
Q 023299 68 CVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSG 105 (284)
Q Consensus 68 ~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G 105 (284)
+|.+..+-||.+. .-..++..|+++|+.|+.+|.=.+|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4566665555555 3567778888899999999986554
No 370
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=20.92 E-value=5.3e+02 Score=22.93 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCcEEEEEcCCCCCC------CCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHh
Q 023299 83 NEAAVILLPSNITLFTLDFSGSGL------SDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (284)
Q Consensus 83 ~~~~~~l~~~g~~v~~~d~~g~G~------S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 154 (284)
..+.+.|.++|+.|..+-+.-.-+ -++-...-+..+-+.+..++..+++..+. .+=++|.+||=.+...+.
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~-~iPifGICLGHQllalA~ 267 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDPAPLDYAIETIKELLGT-KIPIFGICLGHQLLALAL 267 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCChhHHHHHHHHHHHHhcc-CCCeEEEcHHHHHHHHhc
Confidence 367788999999999877643210 00111112223345566666665554332 225899999998765553
No 371
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.64 E-value=1.2e+02 Score=22.82 Aligned_cols=29 Identities=10% Similarity=-0.197 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEEehhHHH
Q 023299 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVT 149 (284)
Q Consensus 121 d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 149 (284)
++...+.+.....+.+.|+++||+-=|++
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~ 69 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGML 69 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcce
Confidence 55666777777778999999999854443
No 372
>PRK14974 cell division protein FtsY; Provisional
Probab=20.45 E-value=5.9e+02 Score=22.35 Aligned_cols=65 Identities=15% Similarity=0.200 Sum_probs=33.0
Q ss_pred hCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEEEEehhHHHHHHHhccCC---CccEEEEc
Q 023299 91 PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP---SIAGMVLD 166 (284)
Q Consensus 91 ~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~lil~ 166 (284)
..|+.++.+|-.|..... .++.+-++.+........++++.-+.-|.-++..+..+. .+.++|+.
T Consensus 220 ~~~~DvVLIDTaGr~~~~-----------~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHTD-----------ANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccCCc-----------HHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 346777777776543211 111122222222223455667777766666665554432 27777764
No 373
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=20.36 E-value=3.9e+02 Score=23.83 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=45.7
Q ss_pred CccEEEEECCCCC-----ChhhHHHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEE
Q 023299 65 PLPCVVYCHGNSG-----CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIG 139 (284)
Q Consensus 65 ~~~~vv~~HG~~~-----~~~~~~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~ 139 (284)
++-+|||=|...- ....=..+.+.+.+.|=.|..-=++++-..+. . ..+.|+.+.|+++++-.+++.|+
T Consensus 265 S~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~isc~~----~--A~v~~v~~Hi~hIr~VaG~~hIG 338 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFISCSD----R--ATVSDVADHINHIRAVAGIDHIG 338 (419)
T ss_pred hcCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeecccccCCC----c--ccHHHHHHHHHHHHHhhccceee
Confidence 4567999998652 22234567777877765444433343321111 1 12799999999999988888887
Q ss_pred EEE
Q 023299 140 LWG 142 (284)
Q Consensus 140 l~G 142 (284)
|-|
T Consensus 339 lGg 341 (419)
T KOG4127|consen 339 LGG 341 (419)
T ss_pred ccC
Confidence 654
No 374
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=20.35 E-value=34 Score=26.83 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCccEEEEECCCCCChh------------hHHH-HHHHHhhCCcEEEEEcCCC
Q 023299 64 TPLPCVVYCHGNSGCRA------------DANE-AAVILLPSNITLFTLDFSG 103 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~------------~~~~-~~~~l~~~g~~v~~~d~~g 103 (284)
...+.||++||.+.-+. .... +++...+.||.|+.++..-
T Consensus 97 ~~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~~ 149 (178)
T PF09757_consen 97 TAKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPNQ 149 (178)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45789999999775111 1223 5555566788888777653
No 375
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=20.26 E-value=4e+02 Score=20.29 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=39.5
Q ss_pred HHHHHHHhhCCcEEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCc-EEEEEEehhHHHHHHHhccCCCcc
Q 023299 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPSIA 161 (284)
Q Consensus 83 ~~~~~~l~~~g~~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~v~ 161 (284)
..+...|.++||.|+ |+ |..... ....| .+-...+.+.+.+. ..++ |.+.|.-+|-.+ +|.++|.|+
T Consensus 16 ~~l~~~L~~~g~eV~--D~---G~~~~~-~~~dY--pd~a~~va~~V~~g-~~~~GIliCGtGiG~si---aANK~~GIR 83 (148)
T PRK05571 16 EEIIEHLEELGHEVI--DL---GPDSYD-ASVDY--PDYAKKVAEAVVAG-EADRGILICGTGIGMSI---AANKVKGIR 83 (148)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCCCC-CCCCH--HHHHHHHHHHHHcC-CCCEEEEEcCCcHHHHH---HHhcCCCeE
Confidence 345667888899886 54 211111 01122 22233333444333 3443 555666566554 446888888
Q ss_pred EEEEcCCc
Q 023299 162 GMVLDSAF 169 (284)
Q Consensus 162 ~lil~~~~ 169 (284)
+.+..++.
T Consensus 84 AA~~~d~~ 91 (148)
T PRK05571 84 AALCHDTY 91 (148)
T ss_pred EEEECCHH
Confidence 87776544
No 376
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=20.17 E-value=2.8e+02 Score=23.41 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=32.8
Q ss_pred CCccEEEEECCCCCChh-hHHHHHHHHhhCCc-EEEEEcCCCCCCCCCCcccCCcccHhHHHHHHHHHHhcCCCCcEEEE
Q 023299 64 TPLPCVVYCHGNSGCRA-DANEAAVILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (284)
Q Consensus 64 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~-~v~~~d~~g~G~S~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~i~l~ 141 (284)
+...+|++-||...... .+..+...|.+.|+ +|+.-..-| . -++.+++..+++. +..++.|+
T Consensus 140 ~~~a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtvEG------~---------P~~~~vi~~L~~~-g~k~V~L~ 203 (262)
T PF06180_consen 140 KDEAVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTVEG------Y---------PSLEDVIARLKKK-GIKKVHLI 203 (262)
T ss_dssp TTEEEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEETTS------S---------SBHHHHHHHHHHH-T-SEEEEE
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEeCC------C---------CCHHHHHHHHHhc-CCCeEEEE
Confidence 45778899999986555 34555556666652 344433322 1 1244555555554 66777666
Q ss_pred EE
Q 023299 142 GR 143 (284)
Q Consensus 142 G~ 143 (284)
=.
T Consensus 204 Pl 205 (262)
T PF06180_consen 204 PL 205 (262)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 377
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=20.11 E-value=2e+02 Score=18.78 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=20.4
Q ss_pred EECCCCCChh--hHHHHHHHHhhCCcEEEEEc
Q 023299 71 YCHGNSGCRA--DANEAAVILLPSNITLFTLD 100 (284)
Q Consensus 71 ~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d 100 (284)
++-|.+|.+. ....++..+++.|+.|+.+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 3334444444 34567778888899999999
No 378
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=20.09 E-value=2.3e+02 Score=25.50 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=27.4
Q ss_pred cEEEEECCCCCChh--hHHHHHHHHhhCCcEEEEEcCCCCCC
Q 023299 67 PCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGL 106 (284)
Q Consensus 67 ~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~G~ 106 (284)
.+|.+...=||.+. .-..++..|+.+|+.|+.+|+=-+|.
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~~ 163 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQAS 163 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 45555554444444 45677888999999999999865553
Done!